| [1230] | 1 | -------------------------------------------------------------------------------
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| 2 | History File, 2004/02/27 G.A.P. Cirrone, Created
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| 3 | cirrone@lns.infn.it
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| 4 | http://g4advancedexamples.lngs.infn.it/Examples/hadrontherapy
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| 5 | -------------------------------------------------------------------------------
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| [807] | 6 |
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| [1230] | 7 | ====================================================
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| 8 | History file of the Hadrontherapy application
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| 9 | ====================================================
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| [807] | 10 |
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| [1230] | 11 | 25.11.2009 S.E.Mazzaglia & F.Romano; Tag:Hadrontherapy-V09-02-40
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| 12 | - Corrected a bug in HadrontherapyDetectorConstruction class
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| 13 | - Added G4RadiactiveDecayPhysics class to the Physics List.
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| [807] | 14 |
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| [1230] | 15 | 22.11.2009 S.E.Mazzaglia; Tag: Hadrontherapy-V09-02-39
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| 16 | - Correction in the initialization of the passiveProtonBeamLine class.
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| 17 |
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| 18 | 20.11.2009 P.Kaitaniemi; Tag: hadrontherapy-V09-02-38
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| 19 | - Fixes and updates to the analysis scripts in RootScripts/iaeaBenchmark
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| 20 | - Updated RootScripts/README
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| 21 |
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| 22 | 19.11.2009 G.A.P.Cirrone; Tag: hadrontherapy-V09-02-37
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| 23 | - Minor revisions;
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| 24 |
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| 25 | 18.11.2009 G.A.P.Cirrone; Tag: hadrontherapy-V09-02-36
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| 26 | - Correction for a missing function in the HadrontherapyPhysicsListMessenger.cc class file
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| 27 |
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| 28 | 18.11.2009 G.A.P.Cirrone; Tag: hadrontherapy-V09-02-35
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| 29 | - Updated the README file and general code revision for the
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| 30 | Geant4 9.3 release
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| 31 |
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| 32 | 17.11.2009 S.E.Mazzaglia; Tag: hadrontherapy-V09-02-34
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| 33 | - Added some functionalities in order to change, via messengers, the geometry, the voxelization
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| 34 | of the detector, and the disposition in the space of the detector/phantom.
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| 35 | - Added the possibility to calculate the stopping powers for ions too.
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| 36 | - Modified the HadrontherapyDetectorROGeometry class constructor.
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| 37 | - Various additions and fixes to the matrix class.
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| 38 |
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| 39 | 10.11.2009 G.A.P.Cirrone; Tag: hadrontherapy-V09-02-33
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| 40 | - Added the possibility to make a graphical user interface (GUI) using the QT libraries.
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| 41 | To start a GUI the correct enviroment variables must be configured (see the Geant4 installation
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| 42 | manual) and a QT version must be installed
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| 43 |
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| 44 | 05.10.2009 P.Kaitaniemi; Tag: hadrontherapy-V09-02-32
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| 45 | - Fixed a compilation error with GCC 4.4
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| 46 |
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| 47 | 28.09.2009 S.E.Mazzaglia; Tag: hadrontherapy-V09-02-31
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| 48 | - Now the HadrontherapyDetectorConstruction class implements only phantom and detector [RO]geometry.
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| 49 | World volume and the rest of the geometry is inside another class whose messenger allows
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| 50 | modification by users with the same old syntax
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| 51 | - Removed HadrontherapyInteractionParameters from the HadrontherapyGeometryController class
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| 52 |
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| 53 | 20.09.2009 P.Kaitaniemi; Tag: hadrontherapy-V09-02-30
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| 54 | - Added ability to use command based scoring
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| 55 | - IAEA geometry: produce Bragg peak using command based scoring
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| 56 | - Various additions and fixes to the IAEA ROOT scripts
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| 57 | - Additional data extracted from E. Haettner's thesis
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| 58 |
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| 59 | 20.09.2009 P.Kaitaniemi; Tag: hadrontherapy-V09-02-29
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| 60 | - Moved HadrontherapyInteractionParameters initialization to the HadrontherapyGeometryController class
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| 61 |
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| 62 | 11.09.2009 G.A.P.Cirrone; Tag: hadrontherapy-V09-02-28
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| 63 | - Added messengers to control the event number and to draw only particular tracks.
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| 64 | The new command are accessible via the command /event/drawTracks and /event/PrintEventNumber
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| 65 |
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| 66 | 08.09.2009 S.E.Mazzaglia; Tag: hadrontherapy-V09-02-27
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| 67 | - Added a method to retrieve stopping power values for protons, alphas and electrons.
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| 68 | This method is implemented in the new class HadrontherapyInteractionParameters
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| 69 |
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| 70 | 13.08.2009 P.Kaitaniemi; Tag: hadrontherapy-V09-02-26
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| 71 | - Fixed compilation errors when AIDA analysis is used
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| 72 |
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| 73 | 03.08.2009 P.Kaitaniemi; Tag: hadrontherapy-V09-02-25
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| 74 | - Added ability to select the geometry using G4 macro commands
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| 75 | - Improved plotting scripts and improved normalization for the
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| 76 | fragment energy distribution
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| 77 |
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| 78 | 27.07.2009 P.Kaitaniemi; Tag: hadrontherapy-V09-02-24
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| 79 | - IAEA geometry: added ability to remove the phantom by setting its thickness to zero
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| 80 | - Collect simulation metadata: number of events, distance of the detector (IAEA geometry),
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| 81 | depth of the phantom (IAEA geometry), beam energy, energy error
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| 82 | - Added ability to produce angular distribution plots
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| 83 |
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| 84 | 17.07.2009 P.Kaitaniemi; Tag: hadrontherapy-V09-02-23
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| 85 | - Tuned geometry of the E. Haettner experimet (IAEADetectorConstruction)
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| 86 | - Adopted G4ANALYSIS_USE_ROOT flag to activate ROOT analysis
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| 87 | - Improved plotting scripts
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| 88 |
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| 89 | 13.07.2009 P.Kaitaniemi; Tag: hadrontherapy-V09-02-22
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| 90 | - Added the first version of the IAEA benchmark geometry based on
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| 91 | E. Haettner's thesis
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| 92 | - Collect fragment energy distributions
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| 93 | - Added fragment energy distribution data
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| 94 | - ROOT script preparing an IAEA benchmark figure with data
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| 95 |
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| 96 | 08.07.2009 G.A.P.Cirrone; Tag: hadrontherapy-V09-02-21
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| 97 | - Removed the README file in ASCII format
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| 98 |
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| 99 | 27.06.2009 G.A.P.Cirrone; Tag: hadrontherapy-V09-02-20
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| 100 | - Eliminated not necessary dependences in the SteppingAction class
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| 101 | - Added folders containing experimental data (its name is 'experimentalData') and
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| 102 | ROOT scripts ('RootScripts') where Root scripts are stored to
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| 103 | perform a fast comparison with experimental data.
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| 104 | A folder where simulation results are stored is also created. Its
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| 105 | name is 'simulationResults'.
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| 106 |
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| 107 | 27.06.2009 P. Kaitaniemi; Tag hadrontherapy-V09-02-19
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| 108 | - Added ability to change the name of the output file between runs
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| 109 |
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| 110 | 26.06.2009 P. Kaitaniemi; Tag hadrontherapy-V09-02-18
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| 111 | - Fixed a bug in the physics list. Local ion-ion hadronic physics was not loaded due
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| 112 | to an uninitialized variable (locIonIonInelasticIsRegistered)
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| 113 | - Ability to use /analysis/setAnalysisFile <filename> to set the name of the output file
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| 114 | - Added Doxygen documentation tags to the source code and Doxyfile for
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| 115 | documentation settings
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| 116 | - Support for direct use of ROOT for analysis in addition to the default AIDA one
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| 117 | - Local INCL/ABLA physics list for deuterons, tritons and alphas
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| 118 |
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| 119 | 26.06.2009 G.A.P.Cirrone; Tag hadrontherapy-V09-02-17
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| 120 | - Corrected the definition of total inelastic cross section for light ions in the
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| 121 | LocalIonIonInelasticPhysic.cc file
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| 122 |
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| 123 | 26.06.2009 G.A.P.Cirrone; Tag: hadrontherapy-V09-02-16
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| 124 | - Momentarely removed the class for LET calculation
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| 125 | for a conflict with the general structure of Hadrontherapy
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| 126 |
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| 127 | 10.06.2009 G.A.P.Cirrone; Tag: hadrontherapy-V09-02-15
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| 128 | - Corrected a bug in the detector construction
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| 129 |
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| 130 | 05.06.2009 G.A.P.Cirrone and S.Mazzaglia; Tag: hadrontherapy-V09-02-14
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| 131 | - Added a preliminary version of classes for LET calculation.
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| 132 |
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| 133 | 30.05.2009 G.A.P.Cirrone; Tag hadrontherapy-V09-02-13
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| 134 | - README_Hadrontherapy.pdf file updated and improved
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| 135 |
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| 136 | 29.05.2009 G.A.P.Cirrone; Tag hadrontherapy-V09-02-12
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| 137 | - Implemented the new Low energy models (Livermore and Penelope)
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| 138 | now migrated to the new interface (common to the Standard models)
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| 139 | Livermore and Penelope models can be implemented:
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| 140 | Activating the buit-in physics lists (G4EmLivermorePhysics and G4EmPenelopePhysics)
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| 141 | Activation can be done via macro commands in the usual way
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| 142 |
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| 143 | 19.05.2009 F.Romano; Tag hadrontherapy-V09-02-11
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| 144 | - Corrected the stepMax value in each macro in order to avoid
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| 145 | a wrong dose deposition in the first slice.
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| 146 | - Modified and revised the README and macro files.
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| 147 |
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| 148 | 15.05.2009 G.A.P.Cirrone; Tag hadrontherapy-V09-02-10
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| 149 | - Corrected a but in the call of a physic list
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| 150 | - Corrected a bug in the proton_therapy.mac file
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| 151 |
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| 152 | 14.05.2009 G.A.P.Cirrone; Tag hadrontherapy-V09-02-09
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| 153 | - Definitively added the StepMax class to change the max step lenght
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| 154 |
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| 155 | 14.05.2009 G.A.P.Cirrone; Tag: hadrontherapy-V09-02-08
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| 156 | - README file improved.
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| 157 |
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| 158 | 14.05.2009 G.A.P.Cirrone; Tag: hadrontherapy-V09-02-07
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| 159 | - Physic implementation completely changed. Now Hadrontherapy can be launched
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| 160 | with physics lists, packages and built-in physic models;
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| 161 | In the README we give some suggestion in the physic models to use.
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| 162 | All models can be activated via macro command.
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| 163 | - Improved HadrontherapyModulator.cc file;
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| 164 |
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| 165 | 29.03.2009 G.A.P.Cirrone; Tag: hadrontehrapy-V09-02-06
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| 166 | - Extended limits of Binary Cascade in HIProtonNeutronBinary.cc
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| 167 | - Corrected and improved "default" macro file.
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| 168 | - Improved HadrontherapyDetectorConstruction.cc file;
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| 169 | - Comments on HIProtonneutronPrecompound.cc file;
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| 170 | - Improved physicsHadronicPrecompound.mac file;
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| 171 |
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| 172 | 18.03.2009 G.A.P.Cirrone; Tag: hadrontherapy-V09-02-05
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| 173 | - Corrected macro file for the use of the QGSP_BIC package
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| 174 |
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| 175 | 18.03.2009: G.A.P.Cirrone; Tag: hadrontherapy-V09-02-04
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| 176 | - Added commands to Detector Messenger to give the possibility to choose beetween
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| 177 | different beam lines
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| 178 | - Added comments to HadrontherapyMatrix;
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| 179 | _ Improved code and added comments to HIProtonNeutronPrecompound and
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| 180 | HIProtonNeutronBinary;
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| 181 | - Corrected macro file using the Precompound inelastic model;
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| 182 | - Removed the class file HadrontherapyMaterial and improved all the geometry files
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| 183 |
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| 184 | 05.03.2009: G.A.P.Cirrone; Tag: hadrontherapy-V09-02-03
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| 185 | - Updated README
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| 186 |
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| 187 | 02.03.2009: G.A.P.Cirrone; Tag: hadrontherapy-V09-02-02
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| 188 | - Changed name of HadrontherapyBeamLine file to PassiveProtonBeamLine
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| 189 |
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| 190 | 02.03.2009: G.A.P.Cirrone; Tag: hadrontherapy-V09-02-01
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| 191 | - Added generation of ASCII file with dose deposited in the phantom voxels
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| 192 |
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| 193 | 22.02.2009: G.Folger; Tag: hadrontherapy-V09-02-00
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| 194 | - Fix a compilation warning on used ionShenCrossSection in
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| 195 | HIIonLEP.cc
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| 196 |
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| 197 | 20.11.2008: G.A.P.Cirrone and M.Russo; Tag: hadrontherapy-V09-01-11
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| 198 | - Fixed path of macro files
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| 199 |
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| 200 | 20.11.2008: G.A.P.Cirrone; Tag: hadrontherapy-V09-01-10
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| 201 | - Updated the History file
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| 202 | - Corrected cross sections definitions for ions
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| 203 | - Revised the definition and use of the electromagnetic options
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| 204 | for the use with the Standard models
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| 205 |
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| 206 | 20.11.2008: G.A.P.Cirrone and M.Russo; Tag: hadrontherapy-V09-01-09
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| 207 | - Updated readme and improved the comments.
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| 208 |
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| 209 | 20.11.2008: G.A.P.Cirrone and M.Russo; Tag: hadrontherapy-V09-01-08
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| 210 | - Add new approach for the choice of the physic models.
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| 211 | Now packaged physic lists can be used alternatively
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| 212 | to the the physic models implemented in the class files
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| 213 | EM, HE and HI.
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| 214 | - Improved the electromagnetic models for the generic ions
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| 215 |
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| 216 | 22.09.2008 G.A.P.Cirrone; Tag: hadrontherapy-V09-01-07
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| 217 | - Corrected the G4eBremsstrahlung() process in the file
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| 218 | EMElectronStandard.cc;
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| 219 | - Updated the head of the History file;
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| 220 |
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| 221 | 17.09.2008 A.Lechner; Tag: hadrontherapy-V09-01-06
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| 222 | - Corrections in the Low Energy Electromagnetic physic lists.
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| 223 |
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| 224 | 15.06.2008 G.A.P.Cirrone; Tag: hadrontherapy-V09-01-05
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| 225 | - Removed AIDA call from GNUmakefile
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| 226 |
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| 227 | 19.05.2008 G.A.P.Cirrone tag hadrontherapy-V09-01-04
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| 228 | - Added in the beam line the MOPI detector. MOPI is a microstrip
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| 229 | detector that, in the real case, is able to check during
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| 230 | the treatment, the beam simmetry of the therapy beam.
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| 231 | Its physical structure is here exactly simulated so that
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| 232 | the its contribute to the energy loss can be take into account;
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| 233 | A detailed description if the detector can be found in
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| 234 | NIM A 572 (2007) 1094-1101 and its references.
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| 235 | - Corrected the position of the Phantom and Detector;
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| 236 | - Added variables to the HadrontherapyBeamLine.cc file;
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| 237 | - Added comments to the HadrontherapyBeamLine.cc file
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| 238 | to improve the clearness.
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| 239 | - Updated the README file.
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| 240 | - Changed the default dimensions of histogram bins
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| 241 | (from 200 um to 100 um).
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| 242 |
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| 243 | 09.03.2008 G.A.P.Cirrone tag hadrontherapy-V09-01-03
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| 244 | - Completed the update of the new beam line
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| 245 |
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| 246 | 09.03.2008 G.A.P.Cirrone tag hadrontherapy-V09-01-02
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| 247 | - Added comments to the PhysicsList class;
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| 248 | - Eliminated not used production cuts in PhysicsList;
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| 249 | - Added NIST definition materials in Material class;
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| 250 | - Code review of the DetectorConstruction class;
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| 251 | - Changed name of the volume where the energy deposited is collected
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| 252 | from "phantom" to "detector". "Detector" is a more appropiate
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| 253 | name.
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| 254 | - Changed name of the volume where the detector is inserted from
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| 255 | "patient" to the more appropriate "Water Phantom";
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| 256 |
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| 257 | 03.03.2008 G.A.P.Cirrone tag hadrontherapy-V09-01-01
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| 258 | - Added the generation of .root file;
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| 259 | - Removed a segmentation due to an uncorect pointer
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| 260 | in the EMHadronIonStandard class;
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| 261 | - Added options for an accurate use of Standard electromagnetic models
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| 262 | in the EMHadronIonStandard, EMElectronStandard,
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| 263 | EMPositronStandard, EMPhotonStandard and EMMuonStandard classes;
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| 264 | - Added a macro file (physicsElectromagneticStandard.mac)
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| 265 | for the use of Hadrontherapy with the Standard Electromagnetic models;
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| 266 | - Corrected in the defaultMacro.mac, a wrong command for the
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| 267 | activation of the Standard Electromagnetic models;
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| 268 |
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| 269 | 29.02.2007 G.A.P.Cirrone tag hadrontherapy-V09-01-00
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| 270 | - Updated README
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| 271 |
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| [807] | 272 | 16.11.2007 Anton Lechner tag hadrontherapy-V09-00-00
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| 273 | Updated physics commands in macro files
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| 274 | Updated README
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| 275 |
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| 276 | 07.06.2007 MGP tag hadrontherapy-V08-03-04
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| 277 | On top of head as on 07.06.2007
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| 278 | Physics component redesigned and reimplemented by Anton Lechner
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| 279 | as a result of code review
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| 280 | Physics version to be used for Bragg peak validation paper
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| 281 | Note: previous tag hadrontherapy-V09-00-00 does not respect
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| 282 | the tag numbering scheme, to be cvs removed
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| 283 |
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| 284 | 04.06.2007 G.A.P. Cirrone (harontherapy-V08-03-03)
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| 285 | - Various bugs fixed and random engine changed.
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| 286 |
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| 287 | 04.06.2007 G.A.P. Cirrone (hadrontherapy-V09-00-00)
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| 288 | - Changed the random engine.
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| 289 |
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| 290 | 10.05.2007 G.A.P. Cirrone (hadrontherapy-V08-03-02)
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| 291 | - Improved the modulator geometry and fixed a bug on its rotation;
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| 292 |
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| 293 | 07.05.2007 G.A.P. Cirrone (hadrontherapy-V08-02-02)
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| [1230] | 294 | - Geometry upgrade(hadrontherapyBeamLine class) according
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| 295 | to the experimental CATANA proton therapy beam line;
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| [807] | 296 |
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| 297 | 23.04.2007 S. Guatelli (hadrontherapy-V08-02-01)
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| 298 | - Compilation error corrected - human error of Susanna Guatelli.
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| 299 | - The file src/HadrontherapyProtonBertiniElastic.cc
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| 300 | and the file include/HadrontherapyProtonBertiniElastic.hh
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| 301 | have been removed
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| 302 | - This class is part of the previous version of the hadrontherapy
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| 303 | application,and it not necessary anymore in the current version
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| 304 | of the hadrontherapy application.
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| 305 |
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| 306 | 24.1.2007 S. Guatelli (hadrontherapy-V08-02-00)
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| 307 | - Design iteration
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| 308 | - Physics lists added
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| 309 |
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| 310 | 16.11.2006 S. Guatelli (hadrontherapy-V08-01-05)
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| 311 | - Physics lists cleaned
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| 312 |
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| 313 | 15.11.2006 G.A.P. Cirrone (hadrontherapy-V08-01-04)
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| 314 | - Changed cut and cut per region default values. Improved Max Step function
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| 315 | along the beam line.
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| 316 |
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| 317 | 14.11.2006 J. Allison
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| 318 | - Removed /vis/scene/transientsAction none (no longer available).
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| 319 |
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| 320 |
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| 321 | 02.10.2006 G.A.P. Cirrone and S. Guatelli(hadrontherapy-V08-01-03)
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| 322 | - Bug fix in the geometry (hadrontherapy beam line)
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| 323 | problem: wrong volume hierarchy
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| 324 |
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| 325 | 24.07.2006 S. Guatelli (hadrontherapy-V08-01-00)
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| 326 | - Bug fix in the HadrontherapyProtonPrecompound.cc concerning
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| 327 | neutron fission and capture
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| 328 |
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| 329 | 30.05.2006 S. Guatelli (hadrontherapy-V08-00-04)
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| 330 | - Bug deleted in all the hadronic phsyics lists; the hadronic
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| 331 | processes are not activated for He3 at the moment.
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| 332 |
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| 333 | 17.05.2006 S. Guatelli (hadrontherapy-V08-00-02)
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| 334 | - Bug deleted with He3 in the HadrontherapyProtonPrecompound physics
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| 335 | list
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| 336 |
|
|---|
| 337 | 16.05.2006 S. Guatelli (hadrontherapy-V08-00-01)
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| 338 | - Comments in the primary particle component and in the physics component
|
|---|
| 339 |
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|---|
| 340 | 18.04.2006 G.A.P. Cirrone (hadrontherapy-V07-08-01)
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|---|
| 341 | - Improved the random generator;
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|---|
| 342 | - Corrected a bug in the primary generator action
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|---|
| 343 | on SetParticleMomentum();
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|---|
| 344 | - Changed the beam line according with a modification in the real beam line
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|---|
| 345 | considered as model (the CATANA proton therapy beam line at LNS-INFN, Catania (I));
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|---|
| 346 |
|
|---|
| 347 | 06.12.2005 S. Guatelli (hadrontherapy-V07-01-05)
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|---|
| 348 | - Particles updated
|
|---|
| 349 | - Updated macros
|
|---|
| 350 |
|
|---|
| 351 | 23.11.2005 S. Guatelli (hadrontherapy-V07-01-04)
|
|---|
| 352 | - File ASCII as output file deleted
|
|---|
| 353 |
|
|---|
| 354 | 02.09.2005 S. Guatelli (hadrontherapy-V07-01-03)
|
|---|
| 355 | - Added Hadronic physics models
|
|---|
| 356 |
|
|---|
| 357 | 08.07.2005 S. Guatelli (hadrontherapy-V07-01-02)
|
|---|
| 358 | - Added alternative stopping power parameterisations for protons:
|
|---|
| 359 | ICRU49, Ziegler 1977, Ziegler 1985, Ziegler (SRIM) 2000
|
|---|
| 360 |
|
|---|
| 361 | 30.05.2005 G.A.P. Cirrone and S.Guatelli (hadrontherapy-V07-00-06)
|
|---|
| 362 | - Removed warnings;
|
|---|
| 363 | - Analisys with AIDA 3.2.1 and PI 1.3.3;
|
|---|
| 364 | - Corrected bug in the modulator wheel;
|
|---|
| 365 | - Added the hadronic physic list for proton and ion;
|
|---|
| 366 | - Code review
|
|---|
| 367 |
|
|---|
| 368 | 18.05.2005 Susanna Guatelli (hadrontherapy-V07-00-03)
|
|---|
| 369 | - Delete public variables
|
|---|
| 370 | - Optimisation of the detector construction
|
|---|
| 371 | - Optimisation of the sensitive detector
|
|---|
| 372 | - Modular physics introduced
|
|---|
| 373 |
|
|---|
| 374 | 03.05.2005 John Allison (examples-V07-00-03)
|
|---|
| 375 | - Replaced vis manager with G4VisExecutive.
|
|---|
| 376 |
|
|---|
| 377 | 28.04.2005 - M.Piergentili
|
|---|
| 378 | Modular Physics list, Primary Generator Messenger,
|
|---|
| 379 | updated README and defaultMacro.mac,
|
|---|
| 380 | tag: hadrontherapy-V07-00-02
|
|---|
| 381 |
|
|---|
| 382 |
|
|---|
| 383 | 25.02.2005 - G.A.P. Cirrone & M.Piergentili, update of the physiscList
|
|---|
| 384 | class to correct some bugs.
|
|---|
| 385 | 30.11.2004 - S. Guatelli,
|
|---|
| 386 | correct analysis, tag: hadrontherapy-V06-02-00
|
|---|
| 387 |
|
|---|
| 388 | 16.07.2004 - G.A.P. Cirrone
|
|---|
| 389 | AIDA classes inserted. Generation of an .hbk file
|
|---|
| 390 | containing the depth dose distribution.
|
|---|
| 391 |
|
|---|
| 392 | 28.05.2004 - S. Guatelli
|
|---|
| 393 | Update of the README, code review for public release.
|
|---|
| 394 |
|
|---|
| 395 | 29.03.2004 - G. Russo
|
|---|
| 396 | Redefinition of the physics list with hadronic model.
|
|---|
| 397 |
|
|---|
| 398 | 14.03.2004 - G.A.P. Cirrone
|
|---|
| 399 | Attempt to insert AIDA class for .xml file creation.
|
|---|
| 400 |
|
|---|
| 401 | 13.03.2004 - G.A.P. Cirrone
|
|---|
| 402 | Redefinition of the design.
|
|---|
| 403 |
|
|---|
| 404 | 27.02.2004 - G.A.P. Cirrone
|
|---|
| 405 | Created, first version.
|
|---|
| 406 |
|
|---|
| 407 |
|
|---|
| 408 |
|
|---|
| 409 |
|
|---|
| 410 |
|
|---|
| 411 |
|
|---|
