[1337] | 1 | // |
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| 2 | // ******************************************************************** |
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| 3 | // * License and Disclaimer * |
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| 4 | // * * |
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| 5 | // * The Geant4 software is copyright of the Copyright Holders of * |
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| 6 | // * the Geant4 Collaboration. It is provided under the terms and * |
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| 7 | // * conditions of the Geant4 Software License, included in the file * |
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| 8 | // * LICENSE and available at http://cern.ch/geant4/license . These * |
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| 9 | // * include a list of copyright holders. * |
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| 10 | // * * |
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| 11 | // * Neither the authors of this software system, nor their employing * |
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| 12 | // * institutes,nor the agencies providing financial support for this * |
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| 13 | // * work make any representation or warranty, express or implied, * |
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| 14 | // * regarding this software system or assume any liability for its * |
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| 15 | // * use. Please see the license in the file LICENSE and URL above * |
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| 16 | // * for the full disclaimer and the limitation of liability. * |
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| 17 | // * * |
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| 18 | // * This code implementation is the result of the scientific and * |
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| 19 | // * technical work of the GEANT4 collaboration. * |
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| 20 | // * By using, copying, modifying or distributing the software (or * |
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| 21 | // * any work based on the software) you agree to acknowledge its * |
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| 22 | // * use in resulting scientific publications, and indicate your * |
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| 23 | // * acceptance of all terms of the Geant4 Software license. * |
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| 24 | // ******************************************************************** |
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| 25 | // |
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| 26 | // $Id: HadrontherapyAnalisysManager.cc; |
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| 27 | // See more at: http://g4advancedexamples.lngs.infn.it/Examples/hadrontherapy |
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[807] | 28 | |
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| 29 | #include "HadrontherapyAnalysisManager.hh" |
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[1230] | 30 | #include "HadrontherapyMatrix.hh" |
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| 31 | #include "HadrontherapyAnalysisFileMessenger.hh" |
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| 32 | #include <time.h> |
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[1313] | 33 | |
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[807] | 34 | HadrontherapyAnalysisManager* HadrontherapyAnalysisManager::instance = 0; |
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| 35 | |
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[1313] | 36 | HadrontherapyAnalysisManager::HadrontherapyAnalysisManager(): |
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| 37 | #ifdef G4ANALYSIS_USE_ROOT |
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| 38 | analysisFileName("DoseDistribution.root"),theTFile(0), histo1(0), histo2(0), histo3(0), |
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| 39 | histo4(0), histo5(0), histo6(0), histo7(0), histo8(0), histo9(0), histo10(0), histo11(0), histo12(0), histo13(0), histo14(0), histo15(0), histo16(0), |
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| 40 | kinFragNtuple(0), |
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| 41 | kineticEnergyPrimaryNtuple(0), |
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| 42 | doseFragNtuple(0), |
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| 43 | fluenceFragNtuple(0), |
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| 44 | letFragNtuple(0), |
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| 45 | theROOTNtuple(0), |
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| 46 | theROOTIonTuple(0), |
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| 47 | fragmentNtuple(0), |
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| 48 | metaData(0), |
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| 49 | eventCounter(0) |
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| 50 | { |
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| 51 | fMess = new HadrontherapyAnalysisFileMessenger(this); |
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| 52 | } |
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[1230] | 53 | #endif |
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| 54 | ///////////////////////////////////////////////////////////////////////////// |
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| 55 | |
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[1313] | 56 | HadrontherapyAnalysisManager::~HadrontherapyAnalysisManager() |
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[1230] | 57 | { |
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[1313] | 58 | delete(fMess); |
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| 59 | #ifdef G4ANALYSIS_USE_ROOT |
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| 60 | Clear(); |
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| 61 | #endif |
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[807] | 62 | } |
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[1313] | 63 | |
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| 64 | HadrontherapyAnalysisManager* HadrontherapyAnalysisManager::GetInstance() |
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[1230] | 65 | { |
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[1313] | 66 | if (instance == 0) instance = new HadrontherapyAnalysisManager; |
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| 67 | return instance; |
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[1230] | 68 | } |
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[1313] | 69 | #ifdef G4ANALYSIS_USE_ROOT |
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| 70 | void HadrontherapyAnalysisManager::Clear() |
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[1230] | 71 | { |
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[1313] | 72 | // XXX delete ALL variables!! |
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| 73 | // but this seems to be automatically done by |
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| 74 | // theTFile->Close() command! |
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| 75 | // so we get a *double free or corruption* |
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[807] | 76 | |
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[1313] | 77 | delete metaData; |
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| 78 | metaData = 0; |
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[1230] | 79 | |
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[1313] | 80 | delete fragmentNtuple; |
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| 81 | fragmentNtuple = 0; |
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[807] | 82 | |
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[1313] | 83 | delete theROOTIonTuple; |
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| 84 | theROOTIonTuple = 0; |
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[1230] | 85 | |
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[1313] | 86 | delete theROOTNtuple; |
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| 87 | theROOTNtuple = 0; |
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[1230] | 88 | |
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[1313] | 89 | delete histo16; |
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| 90 | histo16 = 0; |
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[807] | 91 | |
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[1313] | 92 | delete histo15; |
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| 93 | histo15 = 0; |
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[807] | 94 | |
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[1313] | 95 | delete histo14; |
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| 96 | histo14 = 0; |
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[807] | 97 | |
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[1313] | 98 | delete histo13; |
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| 99 | histo13 = 0; |
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[807] | 100 | |
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[1313] | 101 | delete histo12; |
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| 102 | histo12 = 0; |
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[807] | 103 | |
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[1313] | 104 | delete histo11; |
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| 105 | histo11 = 0; |
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[807] | 106 | |
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[1313] | 107 | delete histo10; |
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| 108 | histo10 = 0; |
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[807] | 109 | |
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[1313] | 110 | delete histo9; |
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| 111 | histo9 = 0; |
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[807] | 112 | |
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[1313] | 113 | delete histo8; |
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| 114 | histo8 = 0; |
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[807] | 115 | |
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[1313] | 116 | delete histo7; |
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| 117 | histo7 = 0; |
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[807] | 118 | |
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[1313] | 119 | delete histo6; |
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| 120 | histo6 = 0; |
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[807] | 121 | |
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[1313] | 122 | delete histo5; |
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| 123 | histo5 = 0; |
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[807] | 124 | |
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[1313] | 125 | delete histo4; |
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| 126 | histo4 = 0; |
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[807] | 127 | |
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[1313] | 128 | delete histo3; |
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| 129 | histo3 = 0; |
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[1230] | 130 | |
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[1313] | 131 | delete histo2; |
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| 132 | histo2 = 0; |
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[807] | 133 | |
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[1313] | 134 | delete histo1; |
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| 135 | histo1 = 0; |
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[807] | 136 | } |
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[1230] | 137 | ///////////////////////////////////////////////////////////////////////////// |
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[807] | 138 | |
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[1230] | 139 | void HadrontherapyAnalysisManager::SetAnalysisFileName(G4String aFileName) |
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[807] | 140 | { |
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[1313] | 141 | this->analysisFileName = aFileName; |
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[1230] | 142 | } |
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| 143 | |
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[1313] | 144 | ///////////////////////////////////////////////////////////////////////////// |
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[1230] | 145 | void HadrontherapyAnalysisManager::book() |
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| 146 | { |
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[1313] | 147 | delete theTFile; // this is similar to theTFile->Close() => delete all associated variables created via new, moreover it delete itself. |
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[807] | 148 | |
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[1313] | 149 | theTFile = new TFile(analysisFileName, "RECREATE"); |
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[1230] | 150 | |
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[1313] | 151 | // Create the histograms with the energy deposit along the X axis |
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| 152 | histo1 = createHistogram1D("braggPeak","slice, energy", 400, 0., 80); //<different waterthicknesses are accoutned for in ROOT-analysis stage |
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| 153 | histo2 = createHistogram1D("h20","Secondary protons - slice, energy", 400, 0., 400.); |
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| 154 | histo3 = createHistogram1D("h30","Secondary neutrons - slice, energy", 400, 0., 400.); |
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| 155 | histo4 = createHistogram1D("h40","Secondary alpha - slice, energy", 400, 0., 400.); |
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| 156 | histo5 = createHistogram1D("h50","Secondary gamma - slice, energy", 400, 0., 400.); |
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| 157 | histo6 = createHistogram1D("h60","Secondary electron - slice, energy", 400, 0., 400.); |
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| 158 | histo7 = createHistogram1D("h70","Secondary triton - slice, energy", 400, 0., 400.); |
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| 159 | histo8 = createHistogram1D("h80","Secondary deuteron - slice, energy", 400, 0., 400.); |
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| 160 | histo9 = createHistogram1D("h90","Secondary pion - slice, energy", 400, 0., 400.); |
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| 161 | histo10 = createHistogram1D("h100","Energy distribution of secondary electrons", 70, 0., 70.); |
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| 162 | histo11 = createHistogram1D("h110","Energy distribution of secondary photons", 70, 0., 70.); |
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| 163 | histo12 = createHistogram1D("h120","Energy distribution of secondary deuterons", 70, 0., 70.); |
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| 164 | histo13 = createHistogram1D("h130","Energy distribution of secondary tritons", 70, 0., 70.); |
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| 165 | histo14 = createHistogram1D("h140","Energy distribution of secondary alpha particles", 70, 0., 70.); |
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| 166 | histo15 = createHistogram1D("heliumEnergyAfterPhantom","Energy distribution of secondary helium fragments after the phantom", |
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| 167 | 70, 0., 500.); |
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| 168 | histo16 = createHistogram1D("hydrogenEnergyAfterPhantom","Energy distribution of secondary helium fragments after the phantom", |
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| 169 | 70, 0., 500.); |
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[1230] | 170 | |
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[1313] | 171 | kinFragNtuple = new TNtuple("kinFragNtuple", |
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| 172 | "Kinetic energy by voxel & fragment", |
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| 173 | "i:j:k:A:Z:kineticEnergy"); |
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| 174 | kineticEnergyPrimaryNtuple= new TNtuple("kineticEnergyPrimaryNtuple", |
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| 175 | "Kinetic energy by voxel of primary", |
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| 176 | "i:j:k:kineticEnergy"); |
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| 177 | doseFragNtuple = new TNtuple("doseFragNtuple", |
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| 178 | "Energy deposit by voxel & fragment", |
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| 179 | "i:j:k:A:Z:energy"); |
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[1230] | 180 | |
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[1313] | 181 | fluenceFragNtuple = new TNtuple("fluenceFragNtuple", |
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| 182 | "Fluence by voxel & fragment", |
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| 183 | "i:j:k:A:Z:fluence"); |
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[807] | 184 | |
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[1313] | 185 | letFragNtuple = new TNtuple("letFragNtuple", |
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| 186 | "Let by voxel & fragment", |
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| 187 | "i:j:k:A:Z:letT:letD"); |
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[807] | 188 | |
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[1313] | 189 | theROOTNtuple = new TNtuple("theROOTNtuple", |
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| 190 | "Energy deposit by slice", |
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| 191 | "i:j:k:energy"); |
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[807] | 192 | |
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[1313] | 193 | theROOTIonTuple = new TNtuple("theROOTIonTuple", |
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| 194 | "Generic ion information", |
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| 195 | "a:z:occupancy:energy"); |
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[807] | 196 | |
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[1313] | 197 | fragmentNtuple = new TNtuple("fragmentNtuple", |
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| 198 | "Fragments", |
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| 199 | "A:Z:energy:posX:posY:posZ"); |
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[807] | 200 | |
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[1313] | 201 | metaData = new TNtuple("metaData", |
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| 202 | "Metadata", |
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| 203 | "events:detectorDistance:waterThickness:beamEnergy:energyError:phantomCenterDistance"); |
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[807] | 204 | } |
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| 205 | |
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[1313] | 206 | ///////////////////////////////////////////////////////////////////////////// |
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[1230] | 207 | void HadrontherapyAnalysisManager::FillEnergyDeposit(G4int i, |
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[1313] | 208 | G4int j, |
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| 209 | G4int k, |
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| 210 | G4double energy) |
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[807] | 211 | { |
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[1313] | 212 | if (theROOTNtuple) { |
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| 213 | theROOTNtuple->Fill(i, j, k, energy); |
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| 214 | } |
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[807] | 215 | } |
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| 216 | |
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[1313] | 217 | ///////////////////////////////////////////////////////////////////////////// |
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[807] | 218 | void HadrontherapyAnalysisManager::BraggPeak(G4int slice, G4double energy) |
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| 219 | { |
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[1313] | 220 | histo1->SetBinContent(slice, energy); //This uses setbincontent instead of fill to get labels correct |
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[807] | 221 | } |
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| 222 | |
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[1313] | 223 | ///////////////////////////////////////////////////////////////////////////// |
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[807] | 224 | void HadrontherapyAnalysisManager::SecondaryProtonEnergyDeposit(G4int slice, G4double energy) |
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| 225 | { |
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[1313] | 226 | histo2->Fill(slice, energy); |
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[807] | 227 | } |
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| 228 | |
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[1313] | 229 | ///////////////////////////////////////////////////////////////////////////// |
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[807] | 230 | void HadrontherapyAnalysisManager::SecondaryNeutronEnergyDeposit(G4int slice, G4double energy) |
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| 231 | { |
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[1313] | 232 | histo3->Fill(slice, energy); |
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[807] | 233 | } |
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| 234 | |
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[1313] | 235 | ///////////////////////////////////////////////////////////////////////////// |
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[807] | 236 | void HadrontherapyAnalysisManager::SecondaryAlphaEnergyDeposit(G4int slice, G4double energy) |
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| 237 | { |
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[1313] | 238 | histo4->Fill(slice, energy); |
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[807] | 239 | } |
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| 240 | |
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[1313] | 241 | ///////////////////////////////////////////////////////////////////////////// |
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[807] | 242 | void HadrontherapyAnalysisManager::SecondaryGammaEnergyDeposit(G4int slice, G4double energy) |
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| 243 | { |
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[1313] | 244 | histo5->Fill(slice, energy); |
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[807] | 245 | } |
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| 246 | |
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[1313] | 247 | ///////////////////////////////////////////////////////////////////////////// |
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[807] | 248 | void HadrontherapyAnalysisManager::SecondaryElectronEnergyDeposit(G4int slice, G4double energy) |
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| 249 | { |
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[1313] | 250 | histo6->Fill(slice, energy); |
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[807] | 251 | } |
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| 252 | |
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[1313] | 253 | ///////////////////////////////////////////////////////////////////////////// |
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[807] | 254 | void HadrontherapyAnalysisManager::SecondaryTritonEnergyDeposit(G4int slice, G4double energy) |
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| 255 | { |
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[1313] | 256 | histo7->Fill(slice, energy); |
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[807] | 257 | } |
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| 258 | |
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[1313] | 259 | ///////////////////////////////////////////////////////////////////////////// |
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[807] | 260 | void HadrontherapyAnalysisManager::SecondaryDeuteronEnergyDeposit(G4int slice, G4double energy) |
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| 261 | { |
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[1313] | 262 | histo8->Fill(slice, energy); |
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[807] | 263 | } |
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| 264 | |
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[1313] | 265 | ///////////////////////////////////////////////////////////////////////////// |
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[807] | 266 | void HadrontherapyAnalysisManager::SecondaryPionEnergyDeposit(G4int slice, G4double energy) |
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| 267 | { |
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[1313] | 268 | histo9->Fill(slice, energy); |
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[807] | 269 | } |
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| 270 | |
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[1313] | 271 | ///////////////////////////////////////////////////////////////////////////// |
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[807] | 272 | void HadrontherapyAnalysisManager::electronEnergyDistribution(G4double energy) |
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| 273 | { |
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[1313] | 274 | histo10->Fill(energy); |
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[807] | 275 | } |
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| 276 | |
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[1313] | 277 | ///////////////////////////////////////////////////////////////////////////// |
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[807] | 278 | void HadrontherapyAnalysisManager::gammaEnergyDistribution(G4double energy) |
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| 279 | { |
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[1313] | 280 | histo11->Fill(energy); |
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[807] | 281 | } |
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| 282 | |
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[1313] | 283 | ///////////////////////////////////////////////////////////////////////////// |
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[807] | 284 | void HadrontherapyAnalysisManager::deuteronEnergyDistribution(G4double energy) |
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| 285 | { |
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[1313] | 286 | histo12->Fill(energy); |
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[807] | 287 | } |
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| 288 | |
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[1313] | 289 | ///////////////////////////////////////////////////////////////////////////// |
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[807] | 290 | void HadrontherapyAnalysisManager::tritonEnergyDistribution(G4double energy) |
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| 291 | { |
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[1313] | 292 | histo13->Fill(energy); |
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[807] | 293 | } |
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| 294 | |
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[1313] | 295 | ///////////////////////////////////////////////////////////////////////////// |
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[807] | 296 | void HadrontherapyAnalysisManager::alphaEnergyDistribution(G4double energy) |
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| 297 | { |
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[1313] | 298 | histo14->Fill(energy); |
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[807] | 299 | } |
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[1313] | 300 | ///////////////////////////////////////////////////////////////////////////// |
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[1230] | 301 | void HadrontherapyAnalysisManager::heliumEnergy(G4double secondaryParticleKineticEnergy) |
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| 302 | { |
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[1313] | 303 | histo15->Fill(secondaryParticleKineticEnergy); |
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[1230] | 304 | } |
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[807] | 305 | |
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[1313] | 306 | ///////////////////////////////////////////////////////////////////////////// |
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[1230] | 307 | void HadrontherapyAnalysisManager::hydrogenEnergy(G4double secondaryParticleKineticEnergy) |
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| 308 | { |
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[1313] | 309 | histo16->Fill(secondaryParticleKineticEnergy); |
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[1230] | 310 | } |
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| 311 | |
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[1313] | 312 | ///////////////////////////////////////////////////////////////////////////// |
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| 313 | // FillKineticFragmentTuple create an ntuple where the voxel indexs, the atomic number and mass and the kinetic |
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| 314 | // energy of all the particles interacting with the phantom, are stored |
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| 315 | void HadrontherapyAnalysisManager::FillKineticFragmentTuple(G4int i, G4int j, G4int k, G4int A, G4double Z, G4double kinEnergy) |
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| 316 | { |
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| 317 | kinFragNtuple -> Fill(i, j, k, A, Z, kinEnergy); |
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| 318 | } |
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[1230] | 319 | |
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[1313] | 320 | ///////////////////////////////////////////////////////////////////////////// |
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| 321 | // FillKineticEnergyPrimaryNTuple creates a ntuple where the voxel indexs and the kinetic |
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| 322 | // energies of ONLY primary particles interacting with the phantom, are stored |
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| 323 | void HadrontherapyAnalysisManager::FillKineticEnergyPrimaryNTuple(G4int i, G4int j, G4int k, G4double kinEnergy) |
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| 324 | { |
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| 325 | kineticEnergyPrimaryNtuple -> Fill(i, j, k, kinEnergy); |
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| 326 | } |
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[1230] | 327 | |
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[1313] | 328 | ///////////////////////////////////////////////////////////////////////////// |
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| 329 | // This function is called only if ROOT is activated. |
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| 330 | // It is called by the HadrontherapyMatric.cc class file and it is used to create two ntuples containing |
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| 331 | // the total energy deposited and the fluence values, in each voxel and per any particle (primary beam |
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| 332 | // and secondaries ) |
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| 333 | void HadrontherapyAnalysisManager::FillVoxelFragmentTuple(G4int i, G4int j, G4int k, G4int A, G4double Z, G4double energy, G4double fluence) |
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[1230] | 334 | { |
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[1313] | 335 | // Fill the ntuple containing the voxel, mass and atomic number and the energy deposited |
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| 336 | doseFragNtuple -> Fill( i, j, k, A, Z, energy ); |
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| 337 | |
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| 338 | // Fill the ntuple containing the voxel, mass and atomic number and the fluence |
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| 339 | if (i==1 && Z==1) { |
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| 340 | fluenceFragNtuple -> Fill( i, j, k, A, Z, fluence ); |
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[1230] | 341 | |
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[1313] | 342 | } |
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[1230] | 343 | } |
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| 344 | |
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[1313] | 345 | void HadrontherapyAnalysisManager::FillLetFragmentTuple(G4int i, G4int j, G4int k, G4int A, G4double Z, G4double letT, G4double letD) |
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[807] | 346 | { |
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[1313] | 347 | letFragNtuple -> Fill( i, j, k, A, Z, letT, letD); |
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[1230] | 348 | |
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[807] | 349 | } |
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[1313] | 350 | ///////////////////////////////////////////////////////////////////////////// |
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| 351 | void HadrontherapyAnalysisManager::FillFragmentTuple(G4int A, G4double Z, G4double energy, G4double posX, G4double posY, G4double posZ) |
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| 352 | { |
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| 353 | fragmentNtuple->Fill(A, Z, energy, posX, posY, posZ); |
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| 354 | } |
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[807] | 355 | |
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[1313] | 356 | ///////////////////////////////////////////////////////////////////////////// |
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| 357 | void HadrontherapyAnalysisManager::genericIonInformation(G4int a, |
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| 358 | G4double z, |
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| 359 | G4int electronOccupancy, |
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| 360 | G4double energy) |
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| 361 | { |
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| 362 | if (theROOTIonTuple) { |
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| 363 | theROOTIonTuple->Fill(a, z, electronOccupancy, energy); |
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| 364 | } |
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| 365 | } |
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| 366 | |
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| 367 | ///////////////////////////////////////////////////////////////////////////// |
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[1230] | 368 | void HadrontherapyAnalysisManager::startNewEvent() |
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| 369 | { |
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[1313] | 370 | eventCounter++; |
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[1230] | 371 | } |
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[1313] | 372 | ///////////////////////////////////////////////////////////////////////////// |
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[1230] | 373 | void HadrontherapyAnalysisManager::setGeometryMetaData(G4double endDetectorPosition, G4double waterThickness, G4double phantomCenter) |
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| 374 | { |
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[1313] | 375 | this->detectorDistance = endDetectorPosition; |
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| 376 | this->phantomDepth = waterThickness; |
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| 377 | this->phantomCenterDistance = phantomCenter; |
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[1230] | 378 | } |
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| 379 | void HadrontherapyAnalysisManager::setBeamMetaData(G4double meanKineticEnergy,G4double sigmaEnergy) |
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| 380 | { |
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[1313] | 381 | this->beamEnergy = meanKineticEnergy; |
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| 382 | this->energyError = sigmaEnergy; |
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[1230] | 383 | } |
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| 384 | ///////////////////////////////////////////////////////////////////////////// |
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[1313] | 385 | // Flush data & close the file |
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[1230] | 386 | void HadrontherapyAnalysisManager::flush() |
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| 387 | { |
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[1313] | 388 | if (theTFile) |
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| 389 | { |
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| 390 | theTFile -> Write(); |
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| 391 | theTFile -> Close(); |
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| 392 | } |
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| 393 | eventCounter = 0; |
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[1230] | 394 | } |
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| 395 | |
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[807] | 396 | #endif |
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