1 | // |
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2 | // ******************************************************************** |
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3 | // * License and Disclaimer * |
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4 | // * * |
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5 | // * The Geant4 software is copyright of the Copyright Holders of * |
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6 | // * the Geant4 Collaboration. It is provided under the terms and * |
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7 | // * conditions of the Geant4 Software License, included in the file * |
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8 | // * LICENSE and available at http://cern.ch/geant4/license . These * |
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9 | // * include a list of copyright holders. * |
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10 | // * * |
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11 | // * Neither the authors of this software system, nor their employing * |
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12 | // * institutes,nor the agencies providing financial support for this * |
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13 | // * work make any representation or warranty, express or implied, * |
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14 | // * regarding this software system or assume any liability for its * |
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15 | // * use. Please see the license in the file LICENSE and URL above * |
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16 | // * for the full disclaimer and the limitation of liability. * |
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17 | // * * |
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18 | // * This code implementation is the result of the scientific and * |
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19 | // * technical work of the GEANT4 collaboration. * |
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20 | // * By using, copying, modifying or distributing the software (or * |
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21 | // * any work based on the software) you agree to acknowledge its * |
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22 | // * use in resulting scientific publications, and indicate your * |
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23 | // * acceptance of all terms of the Geant4 Software license. * |
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24 | // ******************************************************************** |
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25 | // |
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26 | // |
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27 | // $Id: G4AugerData.cc v1.0 |
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28 | // |
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29 | // |
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30 | // Author: Alfonso Mmantero (Alfonso.Mantero@ge.infn.it) |
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31 | // |
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32 | // History: |
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33 | // ----------- |
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34 | // Based on G4FluoData by Elena Guardincerri |
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35 | // |
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36 | // Modified: 30.07.02 VI Add select active Z + clean up against pedantic compiler |
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37 | // |
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38 | // ------------------------------------------------------------------- |
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39 | |
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40 | #include "G4AugerData.hh" |
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41 | #include "G4DataVector.hh" |
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42 | #include "G4Material.hh" |
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43 | #include "G4Element.hh" |
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44 | #include "G4ElementVector.hh" |
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45 | #include <fstream> |
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46 | #include <sstream> |
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47 | |
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48 | G4AugerData::G4AugerData() |
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49 | { |
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50 | |
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51 | G4int n = 0; |
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52 | G4int pos = 0; |
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53 | |
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54 | for (pos = 0 ; pos < 100; pos++) |
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55 | { |
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56 | numberOfVacancies.push_back(n); |
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57 | } |
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58 | |
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59 | BuildAugerTransitionTable(); |
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60 | |
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61 | |
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62 | } |
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63 | |
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64 | G4AugerData::~G4AugerData() |
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65 | { |
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66 | /* |
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67 | std::map<G4int,std::vector<G4AugerTransition>,std::less<G4int> >::iterator pos; |
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68 | |
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69 | for (pos = augerTransitionTable.begin(); pos != augerTransitionTable.end(); pos++) |
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70 | { |
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71 | std::vector<G4AugerTransition> dataSet = (*pos).second; |
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72 | delete dataSet; |
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73 | } |
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74 | for (pos = energyMap.begin(); pos != energyMap.end(); pos++) |
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75 | { |
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76 | std::map<G4Int,G4DataVector*,std::less<G4int>>* dataMap = (*pos).second; |
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77 | for (pos2 = newIdProbabilityMap.begin(); pos2 != idMap.end(); pos2++) |
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78 | { |
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79 | G4DataVector* dataSet = (*pos2).second; |
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80 | delete dataSet; |
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81 | } |
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82 | } |
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83 | for (pos = probabilityMap.begin(); pos != probabilityMap.end(); pos++) |
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84 | { |
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85 | std::map<G4Int,G4DataVector*,std::less<G4int>>* dataMap = (*pos).second; |
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86 | for (pos2 = newIdProbabilityMap.begin(); pos2 != idMap.end(); pos2++) |
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87 | { |
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88 | G4DataVector* dataSet = (*pos2).second; |
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89 | delete dataSet; |
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90 | } |
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91 | } |
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92 | for (pos2 = newIdMap.begin(); pos2 != idMap.end(); pos2++) |
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93 | { |
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94 | G4DataVector* dataSet = (*pos2).second; |
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95 | delete dataSet; |
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96 | } |
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97 | for (pos2 = newIdEnergyMap.begin(); pos2 != idMap.end(); pos2++) |
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98 | { |
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99 | G4DataVector* dataSet = (*pos2).second; |
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100 | delete dataSet; |
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101 | } |
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102 | for (pos2 = newIdProbabilityMap.begin(); pos2 != idMap.end(); pos2++) |
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103 | { |
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104 | G4DataVector* dataSet = (*pos2).second; |
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105 | delete dataSet; |
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106 | } |
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107 | */ |
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108 | |
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109 | } |
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110 | |
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111 | size_t G4AugerData::NumberOfVacancies(G4int Z) const |
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112 | { |
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113 | return numberOfVacancies[Z]; |
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114 | } |
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115 | |
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116 | G4int G4AugerData::VacancyId(G4int Z, G4int vacancyIndex) const |
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117 | { |
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118 | |
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119 | G4int n = 0; |
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120 | if (vacancyIndex<0 || vacancyIndex>=numberOfVacancies[Z]) |
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121 | {G4Exception("G4AugerData::vacancyIndex outside boundaries");} |
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122 | else { |
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123 | trans_Table::const_iterator element = augerTransitionTable.find(Z); |
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124 | if (element == augerTransitionTable.end()) {G4Exception("G4AugerData::augerTransitionTable: Data not Loaded");} |
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125 | std::vector<G4AugerTransition> dataSet = (*element).second; |
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126 | n = (G4int) dataSet[vacancyIndex].FinalShellId(); |
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127 | } |
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128 | |
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129 | return n; |
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130 | } |
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131 | |
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132 | |
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133 | |
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134 | // Attenzione: questa funzione vuole l'indice della vacanza, non l'Id |
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135 | |
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136 | |
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137 | size_t G4AugerData::NumberOfTransitions(G4int Z, G4int vacancyIndex) const |
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138 | { |
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139 | G4int n = 0; |
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140 | if (vacancyIndex<0 || vacancyIndex>=numberOfVacancies[Z]) |
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141 | {G4Exception("G4AugerData::vacancyIndex outside boundaries");} |
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142 | else { |
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143 | trans_Table::const_iterator element = augerTransitionTable.find(Z); |
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144 | if (element == augerTransitionTable.end()) {G4Exception("G4AugerData::augerTransitionTable: Data not Loaded");} |
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145 | std::vector<G4AugerTransition> dataSet = (*element).second; |
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146 | n = (G4int)dataSet[vacancyIndex].TransitionOriginatingShellIds()->size(); |
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147 | } |
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148 | return n; |
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149 | } |
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150 | |
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151 | |
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152 | |
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153 | size_t G4AugerData::NumberOfAuger(G4int Z, G4int initIndex, G4int vacancyId) const |
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154 | { |
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155 | size_t n = 0; |
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156 | if (initIndex<0 || initIndex>=numberOfVacancies[Z]) |
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157 | {G4Exception("G4AugerData::vacancyIndex outside boundaries");} |
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158 | else { |
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159 | trans_Table::const_iterator element = augerTransitionTable.find(Z); |
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160 | if (element == augerTransitionTable.end()) {G4Exception("G4AugerData::augerTransitionTable: Data not Loaded");} |
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161 | std::vector<G4AugerTransition> dataSet = (*element).second; |
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162 | const std::vector<G4int>* temp = dataSet[initIndex].AugerOriginatingShellIds(vacancyId); |
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163 | n = temp->size(); |
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164 | } |
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165 | return n; |
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166 | } |
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167 | |
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168 | size_t G4AugerData::AugerShellId(G4int Z, G4int vacancyIndex, G4int transId, G4int augerIndex) const |
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169 | { |
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170 | size_t n = 0; |
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171 | if (vacancyIndex<0 || vacancyIndex>=numberOfVacancies[Z]) |
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172 | {G4Exception("G4AugerData::vacancyIndex outside boundaries");} |
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173 | else { |
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174 | trans_Table::const_iterator element = augerTransitionTable.find(Z); |
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175 | if (element == augerTransitionTable.end()) {G4Exception("G4AugerData::augerTransitionTable: Data not Loaded");} |
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176 | std::vector<G4AugerTransition> dataSet = (*element).second; |
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177 | n = dataSet[vacancyIndex].AugerOriginatingShellId(augerIndex,transId); |
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178 | } |
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179 | return n; |
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180 | } |
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181 | |
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182 | G4int G4AugerData::StartShellId(G4int Z, G4int vacancyIndex, G4int transitionShellIndex) const |
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183 | { |
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184 | G4int n = 0; |
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185 | |
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186 | if (vacancyIndex<0 || vacancyIndex>=numberOfVacancies[Z]) |
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187 | {G4Exception("G4AugerData::vacancyIndex outside boundaries");} |
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188 | else { |
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189 | trans_Table::const_iterator element = augerTransitionTable.find(Z); |
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190 | if (element == augerTransitionTable.end()) {G4Exception("G4AugerData::augerTransitionTable: Data not Loaded");} |
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191 | std::vector<G4AugerTransition> dataSet = (*element).second; |
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192 | n = dataSet[vacancyIndex].TransitionOriginatingShellId(transitionShellIndex); |
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193 | } |
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194 | |
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195 | |
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196 | return n; |
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197 | } |
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198 | |
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199 | G4double G4AugerData::StartShellEnergy(G4int Z, G4int vacancyIndex, G4int transitionId, G4int augerIndex) const |
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200 | { |
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201 | G4double energy = 0; |
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202 | |
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203 | if (vacancyIndex<0 || vacancyIndex>=numberOfVacancies[Z]) |
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204 | {G4Exception("G4AugerData::vacancyIndex outside boundaries");} |
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205 | else { |
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206 | trans_Table::const_iterator element = augerTransitionTable.find(Z); |
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207 | if (element == augerTransitionTable.end()) {G4Exception("G4AugerData::augerTransitionTable: Data not Loaded");} |
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208 | std::vector<G4AugerTransition> dataSet = (*element).second; |
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209 | energy = dataSet[vacancyIndex].AugerTransitionEnergy(augerIndex,transitionId); |
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210 | |
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211 | } |
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212 | return energy; |
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213 | } |
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214 | |
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215 | |
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216 | G4double G4AugerData::StartShellProb(G4int Z, G4int vacancyIndex,G4int transitionId,G4int augerIndex) const |
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217 | { |
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218 | G4double prob = 0; |
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219 | |
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220 | if (vacancyIndex<0 || vacancyIndex>=numberOfVacancies[Z]) |
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221 | {G4Exception("G4AugerData::vacancyIndex outside boundaries");} |
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222 | else { |
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223 | trans_Table::const_iterator element = augerTransitionTable.find(Z); |
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224 | if (element == augerTransitionTable.end()) {G4Exception("G4AugerData::augerTransitionTable: Data not Loaded");} |
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225 | std::vector<G4AugerTransition> dataSet = (*element).second; |
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226 | prob = dataSet[vacancyIndex].AugerTransitionProbability(augerIndex, transitionId); |
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227 | |
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228 | |
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229 | |
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230 | } |
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231 | return prob; |
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232 | } |
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233 | |
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234 | std::vector<G4AugerTransition> G4AugerData::LoadData(G4int Z) |
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235 | { |
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236 | // Build the complete string identifying the file with the data set |
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237 | |
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238 | std::ostringstream ost; |
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239 | if(Z != 0){ |
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240 | ost << "au-tr-pr-"<< Z << ".dat"; |
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241 | } |
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242 | else{ |
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243 | ost << "au-tr-pr-"<<".dat"; |
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244 | } |
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245 | G4String name(ost.str()); |
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246 | |
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247 | char* path = getenv("G4LEDATA"); |
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248 | if (!path) |
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249 | { |
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250 | G4String excep = "G4EMDataSet - G4LEDATA environment variable not set"; |
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251 | G4Exception(excep); |
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252 | } |
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253 | |
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254 | G4String pathString(path); |
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255 | G4String dirFile = pathString + "/auger/" + name; |
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256 | std::ifstream file(dirFile); |
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257 | std::filebuf* lsdp = file.rdbuf(); |
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258 | |
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259 | if (! (lsdp->is_open()) ) |
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260 | { |
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261 | G4String excep = "G4AugerData - data file: " + dirFile + " not found"; |
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262 | G4Exception(excep); |
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263 | } |
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264 | |
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265 | |
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266 | G4double a = 0; |
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267 | G4int k = 1; |
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268 | G4int s = 0; |
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269 | |
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270 | G4int vacId = 0; |
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271 | std::vector<G4int>* initIds = new std::vector<G4int>; |
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272 | std::vector<G4int>* newIds = new std::vector<G4int>; |
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273 | G4DataVector* transEnergies = new G4DataVector; |
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274 | G4DataVector* transProbabilities = new G4DataVector; |
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275 | std::vector<G4AugerTransition> augerTransitionVector; |
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276 | std::map<G4int,std::vector<G4int>,std::less<G4int> >* newIdMap = |
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277 | new std::map<G4int,std::vector<G4int>,std::less<G4int> >; |
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278 | std::map<G4int,G4DataVector,std::less<G4int> >* newEnergyMap = |
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279 | new std::map<G4int,G4DataVector,std::less<G4int> >; |
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280 | std::map<G4int,G4DataVector,std::less<G4int> >* newProbabilityMap = |
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281 | new std::map<G4int,G4DataVector,std::less<G4int> >; |
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282 | |
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283 | |
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284 | do { |
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285 | file >> a; |
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286 | |
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287 | |
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288 | G4int nColumns = 4; |
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289 | |
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290 | if (a == -1) |
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291 | { |
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292 | |
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293 | |
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294 | |
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295 | if (s == 0) |
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296 | { |
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297 | // End of a shell data set |
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298 | |
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299 | |
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300 | |
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301 | std::vector<G4int>::iterator vectorIndex = initIds->begin(); |
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302 | |
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303 | vacId = *vectorIndex; |
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304 | |
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305 | //initIds->erase(vectorIndex); |
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306 | |
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307 | |
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308 | |
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309 | std::vector<G4int> identifiers; |
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310 | for (vectorIndex = initIds->begin()+1 ; vectorIndex != initIds->end(); ++vectorIndex){ |
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311 | |
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312 | identifiers.push_back(*vectorIndex); |
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313 | } |
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314 | |
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315 | vectorIndex = (initIds->end())-1; |
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316 | |
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317 | G4int augerShellId = *(vectorIndex); |
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318 | |
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319 | |
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320 | (*newIdMap)[augerShellId] = *newIds; |
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321 | (*newEnergyMap)[augerShellId] = *transEnergies; |
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322 | (*newProbabilityMap)[augerShellId] = *transProbabilities; |
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323 | |
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324 | augerTransitionVector.push_back(G4AugerTransition(vacId, identifiers, newIdMap, newEnergyMap, newProbabilityMap)); |
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325 | |
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326 | // Now deleting all the variables I used, and creating new ones for the next shell |
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327 | |
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328 | delete newIdMap; |
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329 | delete newEnergyMap; |
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330 | delete newProbabilityMap; |
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331 | |
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332 | G4int n = initIds->size(); |
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333 | nInitShells.push_back(n); |
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334 | numberOfVacancies[Z]++; |
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335 | delete initIds; |
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336 | delete newIds; |
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337 | delete transEnergies; |
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338 | delete transProbabilities; |
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339 | initIds = new std::vector<G4int>; |
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340 | newIds = new std::vector<G4int>; |
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341 | transEnergies = new G4DataVector; |
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342 | transProbabilities = new G4DataVector; |
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343 | newIdMap = new std::map<G4int,std::vector<G4int>,std::less<G4int> >; |
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344 | newEnergyMap = new std::map<G4int,G4DataVector,std::less<G4int> >; |
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345 | newProbabilityMap = new std::map<G4int,G4DataVector,std::less<G4int> >; |
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346 | |
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347 | |
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348 | |
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349 | } |
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350 | s++; |
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351 | if (s == nColumns) |
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352 | { |
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353 | s = 0; |
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354 | } |
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355 | } |
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356 | else if (a == -2) |
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357 | { |
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358 | // End of file; delete the empty vectors created |
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359 | //when encountering the last -1 -1 row |
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360 | delete initIds; |
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361 | delete newIds; |
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362 | delete transEnergies; |
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363 | delete transProbabilities; |
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364 | delete newIdMap ; |
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365 | delete newEnergyMap; |
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366 | delete newProbabilityMap; |
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367 | } |
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368 | else |
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369 | { |
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370 | |
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371 | if (k%nColumns == 3){ |
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372 | // 3rd column is the transition probabilities |
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373 | transProbabilities->push_back(a); |
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374 | |
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375 | k++;} |
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376 | else if(k%nColumns == 2){ |
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377 | // 2nd column is new auger vacancy |
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378 | |
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379 | // 2nd column is new auger vacancy |
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380 | |
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381 | G4int l = (G4int)a; |
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382 | newIds->push_back(l); |
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383 | |
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384 | |
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385 | k++; |
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386 | } |
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387 | else if (k%nColumns == 1) |
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388 | { |
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389 | // 1st column is shell id |
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390 | |
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391 | if(initIds->size() == 0) { |
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392 | |
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393 | // if this is the first data of the shell, all the colums are equal |
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394 | // to the shell Id; so we skip the next colums ang go to the next row |
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395 | |
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396 | initIds->push_back((G4int)a); |
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397 | // first line of initIds is the original shell of the vacancy |
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398 | file >> a; |
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399 | file >> a; |
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400 | file >> a; |
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401 | k = k+3; |
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402 | } |
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403 | else { |
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404 | |
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405 | // std::vector<G4int>::iterator vectorIndex = (initIds->end())-1; |
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406 | if((G4int)a != initIds->back()){ |
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407 | |
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408 | |
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409 | if((initIds->size()) == 1) { |
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410 | initIds->push_back((G4int)a); |
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411 | } |
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412 | else { |
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413 | |
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414 | |
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415 | G4int augerShellId = 0; |
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416 | augerShellId = initIds->back(); |
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417 | |
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418 | (*newIdMap)[augerShellId] = *newIds; |
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419 | (*newEnergyMap)[augerShellId] = *transEnergies; |
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420 | (*newProbabilityMap)[augerShellId] = *transProbabilities; |
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421 | delete newIds; |
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422 | delete transEnergies; |
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423 | delete transProbabilities; |
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424 | newIds = new std::vector<G4int>; |
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425 | transEnergies = new G4DataVector; |
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426 | transProbabilities = new G4DataVector; |
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427 | initIds->push_back((G4int)a); |
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428 | } |
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429 | } |
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430 | } |
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431 | |
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432 | k++; |
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433 | |
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434 | } |
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435 | else if (k%nColumns == 0) |
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436 | |
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437 | {//fourth column is transition energies |
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438 | G4double e = a * MeV; |
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439 | |
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440 | transEnergies->push_back(e); |
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441 | k=1; |
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442 | |
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443 | } |
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444 | } |
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445 | } |
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446 | |
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447 | |
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448 | while (a != -2); // end of file |
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449 | file.close(); |
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450 | return augerTransitionVector; |
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451 | |
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452 | } |
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453 | |
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454 | void G4AugerData::BuildAugerTransitionTable() |
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455 | { |
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456 | |
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457 | // trans_Table::iterator pos = augerTransitionTable.begin(); |
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458 | |
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459 | const G4MaterialTable* materialTable = G4Material::GetMaterialTable(); |
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460 | |
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461 | G4int nMaterials = G4Material::GetNumberOfMaterials(); |
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462 | |
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463 | G4DataVector activeZ; |
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464 | activeZ.clear(); |
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465 | |
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466 | for (G4int m=0; m<nMaterials; m++) { |
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467 | |
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468 | const G4Material* material= (*materialTable)[m]; |
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469 | const G4ElementVector* elementVector = material->GetElementVector(); |
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470 | const size_t nElements = material->GetNumberOfElements(); |
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471 | |
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472 | for (size_t iEl=0; iEl<nElements; iEl++) { |
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473 | G4Element* element = (*elementVector)[iEl]; |
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474 | G4double Z = element->GetZ(); |
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475 | if (!(activeZ.contains(Z))) { |
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476 | activeZ.push_back(Z); |
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477 | } |
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478 | } |
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479 | } |
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480 | |
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481 | |
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482 | for (G4int element = 6; element < 100; element++) |
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483 | { |
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484 | // if(nMaterials == 0 || activeZ.contains(element)) { |
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485 | augerTransitionTable.insert(trans_Table::value_type(element,LoadData(element))); |
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486 | // G4cout << "G4AugerData for Element no. " << element << " are loaded" << G4endl; |
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487 | // G4cout << "G4AugerData for Element no. " << element << " are loaded" << G4endl; |
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488 | //G4cout << "AugerTransitionTable complete"<< G4endl; |
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489 | } |
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490 | } |
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491 | |
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492 | void G4AugerData::PrintData(G4int Z) |
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493 | { |
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494 | |
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495 | for (G4int i = 0; i < numberOfVacancies[Z]; i++) |
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496 | { |
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497 | G4cout << "---- TransitionData for the vacancy nb " |
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498 | <<i |
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499 | <<" of the atomic number elemnt " |
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500 | << Z |
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501 | <<"----- " |
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502 | <<G4endl; |
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503 | |
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504 | for (size_t k = 0; k<=NumberOfTransitions(Z,i); k++) |
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505 | { |
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506 | G4int id = StartShellId(Z,i,k); |
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507 | |
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508 | for (size_t a = 0; a <= NumberOfAuger(Z,i,id); a++) { |
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509 | |
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510 | G4double e = StartShellEnergy(Z,i,id,a) /MeV; |
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511 | G4double p = StartShellProb(Z,i,id,a); |
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512 | G4int augerId = AugerShellId(Z, i, id, a); |
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513 | G4cout << k <<") Shell id: " << id <<G4endl; |
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514 | G4cout << " Auger Originatig Shell Id :"<< augerId <<G4endl; |
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515 | G4cout << " - Transition energy = " << e << " MeV "<<G4endl; |
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516 | G4cout << " - Transition probability = " << p <<G4endl; |
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517 | } |
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518 | } |
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519 | G4cout << "-------------------------------------------------" |
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520 | << G4endl; |
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521 | } |
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522 | } |
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523 | G4AugerTransition* G4AugerData::GetAugerTransition(G4int Z,G4int vacancyShellIndex) |
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524 | { |
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525 | std::vector<G4AugerTransition>* dataSet = &augerTransitionTable[Z]; |
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526 | std::vector<G4AugerTransition>::iterator vectorIndex = dataSet->begin() + vacancyShellIndex; |
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527 | |
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528 | G4AugerTransition* augerTransition = &(*vectorIndex); |
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529 | return augerTransition; |
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530 | } |
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531 | |
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532 | std::vector<G4AugerTransition>* G4AugerData::GetAugerTransitions(G4int Z) |
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533 | { |
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534 | std::vector<G4AugerTransition>* dataSet = &augerTransitionTable[Z]; |
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535 | return dataSet; |
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536 | } |
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