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// $Id: G4DNABornExcitationModel.cc,v 1.10 2010/08/24 13:51:06 sincerti Exp $
// GEANT4 tag $Name: geant4-09-04-ref-00 $
//

#include "G4DNABornExcitationModel.hh"

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using namespace std;

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G4DNABornExcitationModel::G4DNABornExcitationModel(const G4ParticleDefinition*,
                                             const G4String& nam)
:G4VEmModel(nam),isInitialised(false)
{
  verboseLevel= 0;
  // Verbosity scale:
  // 0 = nothing 
  // 1 = warning for energy non-conservation 
  // 2 = details of energy budget
  // 3 = calculation of cross sections, file openings, sampling of atoms
  // 4 = entering in methods
  
  if( verboseLevel>0 ) 
  { 
    G4cout << "Born excitation model is constructed " << G4endl;
  }
  
}

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G4DNABornExcitationModel::~G4DNABornExcitationModel()
{ 
  // Cross section
  
  std::map< G4String,G4DNACrossSectionDataSet*,std::less<G4String> >::iterator pos;
  for (pos = tableData.begin(); pos != tableData.end(); ++pos)
  {
    G4DNACrossSectionDataSet* table = pos->second;
    delete table;
  }

}

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void G4DNABornExcitationModel::Initialise(const G4ParticleDefinition* particle,
                                       const G4DataVector& /*cuts*/)
{

  if (verboseLevel > 3)
    G4cout << "Calling G4DNABornExcitationModel::Initialise()" << G4endl;

  G4String fileElectron("dna/sigma_excitation_e_born");
  G4String fileProton("dna/sigma_excitation_p_born");

  G4ParticleDefinition* electronDef = G4Electron::ElectronDefinition();
  G4ParticleDefinition* protonDef = G4Proton::ProtonDefinition();

  G4String electron;
  G4String proton;
  
  G4double scaleFactor = (1.e-22 / 3.343) * m*m;

  if (electronDef != 0)
  {
    electron = electronDef->GetParticleName();

    tableFile[electron] = fileElectron;

    lowEnergyLimit[electron] = 9. * eV; 
    highEnergyLimit[electron] = 1. * MeV;

    // Cross section
    
    G4DNACrossSectionDataSet* tableE = new G4DNACrossSectionDataSet(new G4LogLogInterpolation, eV,scaleFactor );
    tableE->LoadData(fileElectron);
      
    tableData[electron] = tableE;
    
  }
  else
  {
    G4Exception("G4DNABornExcitationModel::Initialise(): electron is not defined");
  }

  if (protonDef != 0)
  {
    proton = protonDef->GetParticleName();

    tableFile[proton] = fileProton;

    lowEnergyLimit[proton] = 500. * keV;
    highEnergyLimit[proton] = 100. * MeV;

    // Cross section
    
    G4DNACrossSectionDataSet* tableP = new G4DNACrossSectionDataSet(new G4LogLogInterpolation, eV,scaleFactor );
    tableP->LoadData(fileProton);
      
    tableData[proton] = tableP;
     
  }
  else
  {
    G4Exception("G4DNABornExcitationModel::Initialise(): proton is not defined");
  }

  if (particle==electronDef) 
  {
    SetLowEnergyLimit(lowEnergyLimit[electron]);
    SetHighEnergyLimit(highEnergyLimit[electron]);
  }

  if (particle==protonDef) 
  {
    SetLowEnergyLimit(lowEnergyLimit[proton]);
    SetHighEnergyLimit(highEnergyLimit[proton]);
  }

  if( verboseLevel>0 ) 
  { 
    G4cout << "Born excitation model is initialized " << G4endl
           << "Energy range: "
           << LowEnergyLimit() / eV << " eV - "
           << HighEnergyLimit() / keV << " keV for "
           << particle->GetParticleName()
           << G4endl;
  }
  
  
  if(!isInitialised) 
  {
    isInitialised = true;
  
    if(pParticleChange)
      fParticleChangeForGamma = reinterpret_cast<G4ParticleChangeForGamma*>(pParticleChange);
    else
      fParticleChangeForGamma = new G4ParticleChangeForGamma();
  }    

  // InitialiseElementSelectors(particle,cuts);

}

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G4double G4DNABornExcitationModel::CrossSectionPerVolume(const G4Material* material,
					   const G4ParticleDefinition* particleDefinition,
					   G4double ekin,
					   G4double,
					   G4double)
{
  if (verboseLevel > 3)
    G4cout << "Calling CrossSectionPerVolume() of G4DNABornExcitationModel" << G4endl;

  if (
      particleDefinition != G4Proton::ProtonDefinition()
      &&
      particleDefinition != G4Electron::ElectronDefinition()
     )
   	    
    return 0;

 // Calculate total cross section for model

  G4double lowLim = 0;
  G4double highLim = 0;
  G4double sigma=0;

  if (material->GetName() == "G4_WATER")
  {
    const G4String& particleName = particleDefinition->GetParticleName();
 
    std::map< G4String,G4double,std::less<G4String> >::iterator pos1;
    pos1 = lowEnergyLimit.find(particleName);
    if (pos1 != lowEnergyLimit.end())
    {
      lowLim = pos1->second;
    }
  
    std::map< G4String,G4double,std::less<G4String> >::iterator pos2;
    pos2 = highEnergyLimit.find(particleName);
    if (pos2 != highEnergyLimit.end())
    {
      highLim = pos2->second;
    }

    if (ekin >= lowLim && ekin < highLim)
    {
      std::map< G4String,G4DNACrossSectionDataSet*,std::less<G4String> >::iterator pos;
      pos = tableData.find(particleName);
	
      if (pos != tableData.end())
      {
        G4DNACrossSectionDataSet* table = pos->second;
        if (table != 0)
        {
	  sigma = table->FindValue(ekin);
        }
      }
      else
      {
        G4Exception("G4DNABornExcitationModel::CrossSectionPerVolume: attempting to calculate cross section for wrong particle");
      }
    }

    if (verboseLevel > 3)
    {
      G4cout << "---> Kinetic energy(eV)=" << ekin/eV << G4endl;
      G4cout << " - Cross section per water molecule (cm^2)=" << sigma/cm/cm << G4endl;
      G4cout << " - Cross section per water molecule (cm^-1)=" << sigma*material->GetAtomicNumDensityVector()[1]/(1./cm) << G4endl;
    } 
 
  } // if (waterMaterial)
 
 return sigma*material->GetAtomicNumDensityVector()[1];		   
	   

}

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void G4DNABornExcitationModel::SampleSecondaries(std::vector<G4DynamicParticle*>* /*fvect*/,
					      const G4MaterialCutsCouple* /*couple*/,
					      const G4DynamicParticle* aDynamicParticle,
					      G4double,
					      G4double)
{

  if (verboseLevel > 3)
    G4cout << "Calling SampleSecondaries() of G4DNABornExcitationModel" << G4endl;

  G4double k = aDynamicParticle->GetKineticEnergy();
  
  const G4String& particleName = aDynamicParticle->GetDefinition()->GetParticleName();

  G4int level = RandomSelect(k,particleName);
  G4double excitationEnergy = waterStructure.ExcitationEnergy(level);
  G4double newEnergy = k - excitationEnergy;
  
  if (newEnergy > 0)
  {
      fParticleChangeForGamma->ProposeMomentumDirection(aDynamicParticle->GetMomentumDirection());
      fParticleChangeForGamma->SetProposedKineticEnergy(newEnergy);
      fParticleChangeForGamma->ProposeLocalEnergyDeposit(excitationEnergy);
  }

}

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G4int G4DNABornExcitationModel::RandomSelect(G4double k, const G4String& particle)
{   
  G4int level = 0;

  std::map< G4String,G4DNACrossSectionDataSet*,std::less<G4String> >::iterator pos;
  pos = tableData.find(particle);

  if (pos != tableData.end())
  {
    G4DNACrossSectionDataSet* table = pos->second;

    if (table != 0)
    {
      G4double* valuesBuffer = new G4double[table->NumberOfComponents()];
      const size_t n(table->NumberOfComponents());
      size_t i(n);
      G4double value = 0.;
	    
      while (i>0)
      { 
	i--;
	valuesBuffer[i] = table->GetComponent(i)->FindValue(k);
	value += valuesBuffer[i];
      }
	    
      value *= G4UniformRand();
    
      i = n;
	    
      while (i > 0)
      {
	i--;

	if (valuesBuffer[i] > value)
        {
          delete[] valuesBuffer;
          return i;
        }
	value -= valuesBuffer[i];
      }
	    
      if (valuesBuffer) delete[] valuesBuffer;
    
    }
  }
  else
  {
    G4Exception("G4DNABornExcitationModel::RandomSelect attempting to calculate cross section for wrong particle");
  }
  return level;
}


