[507] | 1 | // |
---|
| 2 | // Analyse of Amas@Nancay runs by J.E Campagne (LAL) |
---|
| 3 | // Version 0: 1/6/2011 |
---|
| 4 | //----------------------------- |
---|
| 5 | |
---|
| 6 | // Utilisation de SOPHYA pour faciliter les tests ... |
---|
| 7 | #include "sopnamsp.h" |
---|
| 8 | #include "machdefs.h" |
---|
| 9 | |
---|
| 10 | #include <stdlib.h> |
---|
| 11 | #include <dirent.h> |
---|
| 12 | |
---|
| 13 | |
---|
| 14 | // include standard c/c++ |
---|
| 15 | #include <iostream> |
---|
| 16 | #include <fstream> |
---|
| 17 | #include <string> |
---|
| 18 | #include <vector> |
---|
| 19 | #include <map> |
---|
| 20 | #include <functional> |
---|
| 21 | #include <algorithm> |
---|
| 22 | #include <numeric> |
---|
| 23 | #include <list> |
---|
| 24 | #include <exception> |
---|
| 25 | |
---|
| 26 | // include sophya mesure ressource CPU/memoire ... |
---|
| 27 | #include "resusage.h" |
---|
| 28 | #include "ctimer.h" |
---|
| 29 | #include "timing.h" |
---|
| 30 | #include "timestamp.h" |
---|
| 31 | #include "strutilxx.h" |
---|
| 32 | #include "ntuple.h" |
---|
| 33 | #include "fioarr.h" |
---|
| 34 | #include "tarrinit.h" |
---|
| 35 | #include "histinit.h" |
---|
| 36 | #include "fitsioserver.h" |
---|
| 37 | #include "fiosinit.h" |
---|
| 38 | #include "ppersist.h" |
---|
| 39 | |
---|
| 40 | |
---|
| 41 | const sa_size_t NUMBER_OF_CHANNELS = 2; |
---|
| 42 | const sa_size_t NUMBER_OF_FREQ = 8192; |
---|
| 43 | const r_4 LOWER_FREQUENCY = 1250.0; //MHz |
---|
| 44 | const r_4 TOTAL_BANDWIDTH = 250.0; //MHz |
---|
| 45 | |
---|
| 46 | //decalration of non class members functions |
---|
| 47 | extern "C" { |
---|
| 48 | int Usage(bool); |
---|
| 49 | } |
---|
| 50 | |
---|
| 51 | |
---|
| 52 | //---------------------------------------------------------- |
---|
| 53 | //Utility fonctions |
---|
| 54 | // Function for deleting pointers in map. |
---|
| 55 | template<class A, class B> |
---|
| 56 | struct DeleteMapFntor |
---|
| 57 | { |
---|
| 58 | // Overloaded () operator. |
---|
| 59 | // This will be called by for_each() function. |
---|
| 60 | bool operator()(pair<A,B> x) const |
---|
| 61 | { |
---|
| 62 | // Assuming the second item of map is to be |
---|
| 63 | // deleted. Change as you wish. |
---|
| 64 | delete x.second; |
---|
| 65 | return true; |
---|
| 66 | } |
---|
| 67 | }; |
---|
| 68 | //----- |
---|
| 69 | bool compare(const pair<string,r_4>& i, const pair<string,r_4>& j) { |
---|
| 70 | return i.second < j.second; |
---|
| 71 | } |
---|
| 72 | //----- |
---|
| 73 | sa_size_t round_sa(r_4 r) { |
---|
| 74 | return static_cast<sa_size_t>((r > 0.0) ? (r + 0.5) : (r - 0.5)); |
---|
| 75 | } |
---|
| 76 | //----- |
---|
| 77 | string StringToLower(string strToConvert){ |
---|
| 78 | //change each element of the string to lower case |
---|
| 79 | for(unsigned int i=0;i<strToConvert.length();i++) { |
---|
| 80 | strToConvert[i] = tolower(strToConvert[i]); |
---|
| 81 | } |
---|
| 82 | return strToConvert;//return the converted string |
---|
| 83 | } |
---|
| 84 | //----- |
---|
| 85 | list<string> ListOfFileInDir(string dir, string filePettern) throw(string) { |
---|
| 86 | list<string> theList; |
---|
| 87 | |
---|
| 88 | |
---|
| 89 | DIR *dip; |
---|
| 90 | struct dirent *dit; |
---|
| 91 | string msg; |
---|
| 92 | string fileName; |
---|
| 93 | string fullFileName; |
---|
| 94 | size_t found; |
---|
| 95 | |
---|
| 96 | if ((dip=opendir(dir.c_str())) == NULL ) { |
---|
| 97 | msg = "opendir failed on directory "+dir; |
---|
| 98 | throw msg; |
---|
| 99 | } |
---|
| 100 | while ( (dit = readdir(dip)) != NULL ) { |
---|
| 101 | fileName = dit->d_name; |
---|
| 102 | found=fileName.find(filePettern); |
---|
| 103 | if (found != string::npos) { |
---|
| 104 | fullFileName = dir + "/"; |
---|
| 105 | fullFileName += fileName; |
---|
| 106 | theList.push_back(fullFileName); |
---|
| 107 | } |
---|
| 108 | }//eo while |
---|
| 109 | if (closedir(dip) == -1) { |
---|
| 110 | msg = "closedir failed on directory "+dir; |
---|
| 111 | throw msg; |
---|
| 112 | } |
---|
| 113 | return theList; |
---|
| 114 | } |
---|
| 115 | |
---|
| 116 | |
---|
| 117 | //Declaration of local classes |
---|
| 118 | //---------------------------------------------- |
---|
| 119 | //Process Interface |
---|
| 120 | class IProcess { |
---|
| 121 | public: |
---|
| 122 | IProcess() {} |
---|
| 123 | virtual ~IProcess() {} |
---|
| 124 | virtual int processCmd() throw(string) =0; |
---|
| 125 | }; |
---|
| 126 | //------------ |
---|
| 127 | //Common Process |
---|
| 128 | class ProcessBase : public IProcess { |
---|
| 129 | public: |
---|
| 130 | ProcessBase(); |
---|
| 131 | virtual ~ProcessBase(); |
---|
| 132 | void SetInputPath(const string& inputPath) {inputPath_ = inputPath;} |
---|
| 133 | void SetOutputPath(const string& outputPath) {outputPath_ = outputPath;} |
---|
| 134 | void SetSourceName(const string& sourceName) {sourceName_ = sourceName;} |
---|
| 135 | void SetDateOfRun(const string& dateOfRun) {dateOfRun_ = dateOfRun;} |
---|
| 136 | void SetSpectraDirectory(const string& spectraDirectory) {spectraDirectory_ = spectraDirectory;} |
---|
| 137 | void SetTypeOfFile(const string& typeOfFile) { typeOfFile_ = typeOfFile; } |
---|
| 138 | void SetNumCycle(const string& numcycle) {numcycle_ = numcycle; } |
---|
| 139 | void SetScaFileName(const string& scaFileName) { scaFileName_ =scaFileName; } |
---|
| 140 | |
---|
| 141 | void SetDebugLevel(const string& debuglev) { |
---|
| 142 | debuglev_ = atoi(debuglev.c_str()); |
---|
| 143 | } |
---|
| 144 | |
---|
| 145 | virtual int processCmd() throw(string); |
---|
| 146 | |
---|
| 147 | protected: |
---|
| 148 | string inputPath_; |
---|
| 149 | string outputPath_; |
---|
| 150 | string sourceName_; |
---|
| 151 | string dateOfRun_; |
---|
| 152 | string spectraDirectory_; |
---|
| 153 | string typeOfFile_; |
---|
| 154 | |
---|
| 155 | string numcycle_; //cycle numbers format="first,last" |
---|
| 156 | sa_size_t ifirstCycle_; |
---|
| 157 | sa_size_t ilastCycle_; |
---|
| 158 | |
---|
| 159 | |
---|
| 160 | uint_4 debuglev_; |
---|
| 161 | string scaFileName_; |
---|
| 162 | NTuple* scaTuple_; |
---|
| 163 | map<sa_size_t,sa_size_t> idCycleInTuple_; |
---|
| 164 | }; |
---|
| 165 | ProcessBase::ProcessBase() { |
---|
| 166 | scaTuple_ = 0; |
---|
| 167 | } |
---|
| 168 | ProcessBase::~ProcessBase() { |
---|
| 169 | if (scaTuple_) delete scaTuple_; |
---|
| 170 | scaTuple_ = 0; |
---|
| 171 | } |
---|
| 172 | //------------ |
---|
| 173 | //Process ON/OFF data |
---|
| 174 | //------------ |
---|
| 175 | class ProcessONOFFData : public ProcessBase { |
---|
| 176 | protected: |
---|
| 177 | string freqBAOCalibration_;//string MHz |
---|
| 178 | public: |
---|
| 179 | ProcessONOFFData(){} |
---|
| 180 | virtual ~ProcessONOFFData(){} |
---|
| 181 | |
---|
| 182 | void SetFreqBAOCalibration(const string& freqBAOCalibration) { |
---|
| 183 | freqBAOCalibration_ = freqBAOCalibration; |
---|
| 184 | } |
---|
| 185 | |
---|
| 186 | virtual int processCmd() throw(string); |
---|
| 187 | }; |
---|
| 188 | //------------ |
---|
| 189 | //Process Gain |
---|
| 190 | //------------ |
---|
| 191 | class ProcessGain : public ProcessBase { |
---|
| 192 | protected: |
---|
| 193 | string mode_; //mode of data taken for gain computation On || Off |
---|
| 194 | public: |
---|
| 195 | ProcessGain(){} |
---|
| 196 | virtual ~ProcessGain(){} |
---|
| 197 | |
---|
| 198 | void SetMode(const string& mode) {mode_ = mode;} |
---|
| 199 | |
---|
| 200 | virtual int processCmd() throw(string); |
---|
| 201 | }; |
---|
| 202 | //------------ |
---|
| 203 | //Process Calibration |
---|
| 204 | //------------ |
---|
| 205 | class ProcessCalibration : public ProcessBase { |
---|
| 206 | protected: |
---|
| 207 | string option_; //option of calibration procedure |
---|
| 208 | string freqBAOCalibration_;//string MHz |
---|
| 209 | r_4 valfreqBAOCalibration_; //value MHz |
---|
| 210 | string bandWidthBAOCalibration_;//string MHz |
---|
| 211 | r_4 valbandWidthBAOCalibration_;//value MHz |
---|
| 212 | |
---|
| 213 | sa_size_t lowerFreqBin_; |
---|
| 214 | sa_size_t upperFreqBin_; |
---|
| 215 | |
---|
| 216 | public: |
---|
| 217 | ProcessCalibration() {} |
---|
| 218 | virtual ~ProcessCalibration(){} |
---|
| 219 | |
---|
| 220 | void SetOption(const string& option) {option_ = option;} |
---|
| 221 | void SetFreqBAOCalibration(const string& freqBAOCalibration) { |
---|
| 222 | freqBAOCalibration_ = freqBAOCalibration; |
---|
| 223 | valfreqBAOCalibration_ = atof(freqBAOCalibration_.c_str()); |
---|
| 224 | } |
---|
| 225 | void SetBandWidthBAOCalibration(const string& bandWidthBAOCalibration) { |
---|
| 226 | bandWidthBAOCalibration_ = bandWidthBAOCalibration; |
---|
| 227 | valbandWidthBAOCalibration_ = atof(bandWidthBAOCalibration_.c_str()); |
---|
| 228 | } |
---|
| 229 | |
---|
| 230 | void ComputeLowerUpperFreqBin(); |
---|
| 231 | |
---|
| 232 | virtual int processCmd() throw(string); |
---|
| 233 | }; |
---|
| 234 | void ProcessCalibration::ComputeLowerUpperFreqBin() { |
---|
| 235 | sa_size_t c0 = round_sa(NUMBER_OF_FREQ*(valfreqBAOCalibration_-LOWER_FREQUENCY)/TOTAL_BANDWIDTH); |
---|
| 236 | sa_size_t dc = round_sa(NUMBER_OF_FREQ*valbandWidthBAOCalibration_/TOTAL_BANDWIDTH); |
---|
| 237 | lowerFreqBin_ = c0-dc/2; |
---|
| 238 | upperFreqBin_ = c0+dc/2; |
---|
| 239 | } |
---|
| 240 | |
---|
| 241 | |
---|
| 242 | //---------------------------------------------------- |
---|
| 243 | //---------------------------------------------------- |
---|
| 244 | int main(int narg, char* arg[]) |
---|
| 245 | { |
---|
| 246 | |
---|
| 247 | //Init process types |
---|
| 248 | map<string,IProcess*> process; |
---|
| 249 | process["dataOnOff"] = new ProcessONOFFData(); |
---|
| 250 | process["gain"] = new ProcessGain(); |
---|
| 251 | process["calib"] = new ProcessCalibration(); |
---|
| 252 | |
---|
| 253 | //Init Sophya related modules |
---|
| 254 | // SophyaInit(); |
---|
| 255 | TArrayInitiator _inia; //nneded for TArray persistancy |
---|
| 256 | FitsIOServerInit(); //needed for input file |
---|
| 257 | |
---|
| 258 | //message used in Exceptions |
---|
| 259 | string msg; |
---|
| 260 | |
---|
| 261 | //Return code |
---|
| 262 | int rc = 0; |
---|
| 263 | |
---|
| 264 | //Arguments managements |
---|
| 265 | if ((narg>1)&&(strcmp(arg[1],"-h")==0)) return Usage(false); |
---|
| 266 | if (narg<11) return Usage(true); |
---|
| 267 | |
---|
| 268 | string action; |
---|
| 269 | string inputPath = "."; |
---|
| 270 | string outputPath = "."; |
---|
| 271 | string sourceName; |
---|
| 272 | string scaFile; |
---|
| 273 | string dateOfRun; |
---|
| 274 | string spectraDirectory; |
---|
| 275 | string freqBAOCalib = ""; |
---|
| 276 | string bandWidthBAOCalib = ""; |
---|
| 277 | string debuglev = "0"; |
---|
| 278 | string mode = ""; |
---|
| 279 | string numcycle; |
---|
| 280 | string calibrationOpt = ""; |
---|
| 281 | |
---|
| 282 | string typeOfFile="medfiltmtx"; |
---|
| 283 | |
---|
| 284 | |
---|
| 285 | // bool okarg=false; |
---|
| 286 | int ka=1; |
---|
| 287 | while (ka<(narg-1)) { |
---|
| 288 | if (strcmp(arg[ka],"-debug")==0) { |
---|
| 289 | debuglev=arg[ka+1]; |
---|
| 290 | ka+=2; |
---|
| 291 | } |
---|
| 292 | if (strcmp(arg[ka],"-act")==0) { |
---|
| 293 | action=arg[ka+1]; |
---|
| 294 | ka+=2; |
---|
| 295 | } |
---|
| 296 | if (strcmp(arg[ka],"-inPath")==0) { |
---|
| 297 | inputPath=arg[ka+1]; |
---|
| 298 | ka+=2; |
---|
| 299 | } |
---|
| 300 | if (strcmp(arg[ka],"-outPath")==0) { |
---|
| 301 | outputPath=arg[ka+1]; |
---|
| 302 | ka+=2; |
---|
| 303 | } |
---|
| 304 | else if (strcmp(arg[ka],"-source")==0) { |
---|
| 305 | sourceName=arg[ka+1]; |
---|
| 306 | ka+=2; |
---|
| 307 | } |
---|
| 308 | else if (strcmp(arg[ka],"-sca")==0) { |
---|
| 309 | scaFile=arg[ka+1]; |
---|
| 310 | ka+=2; |
---|
| 311 | } |
---|
| 312 | else if (strcmp(arg[ka],"-date")==0) { |
---|
| 313 | dateOfRun=arg[ka+1]; |
---|
| 314 | ka+=2; |
---|
| 315 | } |
---|
| 316 | else if (strcmp(arg[ka],"-specdir")==0) { |
---|
| 317 | spectraDirectory=arg[ka+1]; |
---|
| 318 | ka+=2; |
---|
| 319 | } |
---|
| 320 | else if (strcmp(arg[ka],"-specname")==0) { |
---|
| 321 | typeOfFile=arg[ka+1]; |
---|
| 322 | ka+=2; |
---|
| 323 | } |
---|
| 324 | else if (strcmp(arg[ka],"-freqBAOCalib")==0) { |
---|
| 325 | freqBAOCalib = arg[ka+1]; |
---|
| 326 | ka+=2; |
---|
| 327 | } |
---|
| 328 | else if (strcmp(arg[ka],"-bwBAOCalib")==0) { |
---|
| 329 | bandWidthBAOCalib = arg[ka+1]; |
---|
| 330 | ka+=2; |
---|
| 331 | } |
---|
| 332 | else if (strcmp(arg[ka],"-mode")==0) { |
---|
| 333 | mode =arg[ka+1]; |
---|
| 334 | ka+=2; |
---|
| 335 | } |
---|
| 336 | else if (strcmp(arg[ka],"-numcycle")==0) { |
---|
| 337 | numcycle =arg[ka+1]; |
---|
| 338 | ka+=2; |
---|
| 339 | } |
---|
| 340 | else if (strcmp(arg[ka],"-calibopt")==0) { |
---|
| 341 | calibrationOpt =arg[ka+1]; |
---|
| 342 | ka+=2; |
---|
| 343 | } |
---|
| 344 | else ka++; |
---|
| 345 | }//eo while |
---|
| 346 | |
---|
| 347 | |
---|
| 348 | |
---|
| 349 | try { |
---|
| 350 | //verification of action |
---|
| 351 | if(process.find(action) == process.end()) { |
---|
| 352 | msg = "action "; |
---|
| 353 | msg += action + " not valid... FATAL"; |
---|
| 354 | rc = 999; |
---|
| 355 | throw msg; |
---|
| 356 | } |
---|
| 357 | |
---|
| 358 | |
---|
| 359 | // |
---|
| 360 | //Process initialisation... |
---|
| 361 | // |
---|
| 362 | try { |
---|
| 363 | ProcessBase* procbase = dynamic_cast<ProcessBase*>(process[action]); |
---|
| 364 | if (procbase == 0) { |
---|
| 365 | msg= "action "; |
---|
| 366 | msg += action + "Not a <process base> type...FATAL"; |
---|
| 367 | rc = 999; |
---|
| 368 | throw msg; |
---|
| 369 | } |
---|
| 370 | procbase->SetInputPath(inputPath); |
---|
| 371 | procbase->SetOutputPath(outputPath); |
---|
| 372 | |
---|
| 373 | if ("" == sourceName) { |
---|
| 374 | msg = "(FATAL) missingsourceName for action " + action; |
---|
| 375 | Usage(true); |
---|
| 376 | throw msg; |
---|
| 377 | } |
---|
| 378 | procbase->SetSourceName(sourceName); |
---|
| 379 | |
---|
| 380 | if ("" == dateOfRun) { |
---|
| 381 | msg = "(FATAL) missing dateOfRun for action " + action; |
---|
| 382 | Usage(true); |
---|
| 383 | throw msg; |
---|
| 384 | } |
---|
| 385 | procbase->SetDateOfRun(dateOfRun); |
---|
| 386 | |
---|
| 387 | |
---|
| 388 | if ("" == spectraDirectory) { |
---|
| 389 | msg = "(FATAL) missing spectraDirectory for action " + action; |
---|
| 390 | Usage(true); |
---|
| 391 | throw msg; |
---|
| 392 | } |
---|
| 393 | procbase->SetSpectraDirectory(spectraDirectory); |
---|
| 394 | |
---|
| 395 | if ("" == scaFile) { |
---|
| 396 | msg = "(FATAL) missing scaFile for action " + action; |
---|
| 397 | Usage(true); |
---|
| 398 | throw msg; |
---|
| 399 | } |
---|
| 400 | procbase->SetScaFileName(scaFile); |
---|
| 401 | |
---|
| 402 | if ("" == numcycle) { |
---|
| 403 | msg = "(FATAL) missing cycle number for action " + action; |
---|
| 404 | Usage(true); |
---|
| 405 | throw msg; |
---|
| 406 | } |
---|
| 407 | procbase->SetNumCycle(numcycle); |
---|
| 408 | |
---|
| 409 | |
---|
| 410 | procbase->SetTypeOfFile(typeOfFile); |
---|
| 411 | |
---|
| 412 | procbase->SetDebugLevel(debuglev); |
---|
| 413 | } |
---|
| 414 | catch(exception& e){ |
---|
| 415 | throw e.what(); |
---|
| 416 | } |
---|
| 417 | |
---|
| 418 | try { |
---|
| 419 | ProcessONOFFData* procdata = dynamic_cast<ProcessONOFFData*>(process[action]); |
---|
| 420 | if (procdata) { |
---|
| 421 | if (freqBAOCalib == "") { |
---|
| 422 | msg = "(FATAL) missing calibration BAO frequency for action " + action; |
---|
| 423 | Usage(true); |
---|
| 424 | throw msg; |
---|
| 425 | } |
---|
| 426 | procdata->SetFreqBAOCalibration(freqBAOCalib); |
---|
| 427 | } |
---|
| 428 | } |
---|
| 429 | catch(exception& e){ |
---|
| 430 | throw e.what(); |
---|
| 431 | } |
---|
| 432 | |
---|
| 433 | |
---|
| 434 | try { |
---|
| 435 | ProcessGain* procgain = dynamic_cast<ProcessGain*>(process[action]); |
---|
| 436 | if(procgain) { |
---|
| 437 | if (mode == "") { |
---|
| 438 | msg = "(FATAL) missing mode-type for action " + action; |
---|
| 439 | Usage(true); |
---|
| 440 | throw msg; |
---|
| 441 | } |
---|
| 442 | procgain->SetMode(mode); |
---|
| 443 | } |
---|
| 444 | } |
---|
| 445 | catch(exception& e){ |
---|
| 446 | throw e.what(); |
---|
| 447 | } |
---|
| 448 | |
---|
| 449 | try { |
---|
| 450 | ProcessCalibration* proccalib = dynamic_cast<ProcessCalibration*>(process[action]); |
---|
| 451 | if(proccalib) { |
---|
| 452 | if (calibrationOpt == "") { |
---|
| 453 | msg = "(FATAL) missing calibration option"; |
---|
| 454 | Usage(true); |
---|
| 455 | throw msg; |
---|
| 456 | } |
---|
| 457 | if (freqBAOCalib == "") { |
---|
| 458 | msg = "(FATAL) missing calibration BAO frequency for action " + action; |
---|
| 459 | Usage(true); |
---|
| 460 | throw msg; |
---|
| 461 | } |
---|
| 462 | if (bandWidthBAOCalib == "") { |
---|
| 463 | msg = "(FATAL) missing calibration BAO frequency band width for action " + action; |
---|
| 464 | Usage(true); |
---|
| 465 | throw msg; |
---|
| 466 | } |
---|
| 467 | proccalib->SetOption(calibrationOpt); |
---|
| 468 | proccalib->SetFreqBAOCalibration(freqBAOCalib); |
---|
| 469 | proccalib->SetBandWidthBAOCalibration(bandWidthBAOCalib); |
---|
| 470 | proccalib->ComputeLowerUpperFreqBin(); |
---|
| 471 | } |
---|
| 472 | } |
---|
| 473 | catch(exception& e){ |
---|
| 474 | throw e.what(); |
---|
| 475 | } |
---|
| 476 | |
---|
| 477 | // |
---|
| 478 | //execute command |
---|
| 479 | // |
---|
| 480 | rc = process[action]->processCmd(); |
---|
| 481 | |
---|
| 482 | } |
---|
| 483 | catch (std::exception& sex) { |
---|
| 484 | cerr << "\n analyse.cc std::exception :" << (string)typeid(sex).name() |
---|
| 485 | << "\n msg= " << sex.what() << endl; |
---|
| 486 | rc = 78; |
---|
| 487 | } |
---|
| 488 | catch ( string str ) { |
---|
| 489 | cerr << "analyse.cc Exception raised: " << str << endl; |
---|
| 490 | } |
---|
| 491 | catch (...) { |
---|
| 492 | cerr << " analyse.cc catched unknown (...) exception " << endl; |
---|
| 493 | rc = 79; |
---|
| 494 | } |
---|
| 495 | |
---|
| 496 | |
---|
| 497 | |
---|
| 498 | |
---|
| 499 | cout << ">>>> analyse.cc ------- END ----------- RC=" << rc << endl; |
---|
| 500 | |
---|
| 501 | //Delete processes |
---|
| 502 | for_each(process.begin(),process.end(), DeleteMapFntor<string,IProcess*>()); |
---|
| 503 | |
---|
| 504 | return rc; |
---|
| 505 | } |
---|
| 506 | |
---|
| 507 | //--------------------------------------------------- |
---|
| 508 | int Usage(bool flag) { |
---|
| 509 | cout << "Analyse.cc usage...." << endl; |
---|
[514] | 510 | cout << "analyse -act <action_type>: dataOnOff, gain, calib\n" |
---|
[507] | 511 | << " -inPath <path for input files: default='.'>\n" |
---|
| 512 | << " -outPath <path for output files: default='.'>\n" |
---|
| 513 | << " -source <source name> \n" |
---|
| 514 | << " -date <YYYYMMDD>\n" |
---|
| 515 | << " -sca <file name scaXYZ.sum.trans>\n" |
---|
| 516 | << " -specdir <generic directory name of spectra fits files>\n" |
---|
| 517 | << " -specname <generic name of spectra fits files>\n" |
---|
| 518 | << " -freqBAOCalib <freq in MHZ> freq. of calibration BAO\n" |
---|
[514] | 519 | << " valid for act=dataOnOff\n" |
---|
[507] | 520 | << " -bwBAOCalib <band width MHz> band width arround central freq. for calibration BAO\n" |
---|
| 521 | << " valid for act=calib\n" |
---|
| 522 | << " -mode <mode_type>:\n" |
---|
| 523 | << " valid for act=gain, mode_type: On, Off\n" |
---|
| 524 | << " -numcycle <number>,<number>:\n" |
---|
| 525 | << " valid for all actions" |
---|
| 526 | << " -calibopt <option>:\n" |
---|
| 527 | << " valid for act=calib: indiv OR mean (NOT USED)" |
---|
| 528 | << " -debuglev <number> [0=default]\n" |
---|
| 529 | << " 1: normal print\n" |
---|
| 530 | << " 2: save intermediate spectra\n" |
---|
| 531 | << endl; |
---|
| 532 | if (flag) { |
---|
| 533 | cout << "use <path>/analyse -h for detailed instructions" << endl; |
---|
| 534 | return 5; |
---|
| 535 | } |
---|
| 536 | return 1; |
---|
| 537 | } |
---|
| 538 | |
---|
| 539 | int ProcessBase::processCmd() throw(string) { |
---|
| 540 | int rc =0; |
---|
| 541 | string msg; |
---|
| 542 | if(debuglev_>0)cout << "Process Base" << endl; |
---|
| 543 | //------------------------ |
---|
| 544 | //Use the sca file informations |
---|
| 545 | //------------------------ |
---|
| 546 | // string scaFullPathName = "./"; |
---|
| 547 | //TOBE FIXED scaFullPathName += sourceName_+"/"+dateOfRun_ + StringToLower(sourceName_)+"/"; |
---|
| 548 | string scaFullPathName = inputPath_ + "/" |
---|
| 549 | + sourceName_+ "/" +dateOfRun_ + StringToLower(sourceName_)+ "/" + scaFileName_; |
---|
| 550 | char* scaTupleColumnName[9] = {"cycle","stcalOn","spcalOn","stOn","spOn","stcalOff","spcalOff","stOff","spOff"}; |
---|
| 551 | scaTuple_ = new NTuple(9,scaTupleColumnName); |
---|
| 552 | int n = scaTuple_->FillFromASCIIFile(scaFullPathName); |
---|
| 553 | if(n<0){ //Error |
---|
| 554 | msg = "(FATAL) NTuple error loading "+ scaFullPathName; |
---|
| 555 | rc = 999; |
---|
| 556 | throw msg; |
---|
| 557 | } |
---|
| 558 | |
---|
| 559 | if(debuglev_>1){ |
---|
| 560 | cout << "ProcessBase::processCmd: dump tuple in " << scaFullPathName << endl; |
---|
| 561 | scaTuple_->Show(cout); |
---|
| 562 | } |
---|
| 563 | |
---|
| 564 | |
---|
| 565 | //Get the cycles (here consider consecutive cycles) |
---|
| 566 | //The SCA file cannot be used as the DAQ can miss some cycles... |
---|
| 567 | // r_8 firstCycle, lastCycle; |
---|
| 568 | // scaTuple_->GetMinMax("cycle",firstCycle,lastCycle); |
---|
| 569 | // ifirstCycle_ = (sa_size_t)firstCycle; |
---|
| 570 | // ilastCycle_ = (sa_size_t)lastCycle; |
---|
| 571 | //Analyse the string given by -numcycle command line |
---|
| 572 | int ai1=0,ai2=0; |
---|
| 573 | sscanf(numcycle_.c_str(),"%d,%d",&ai1,&ai2); |
---|
| 574 | ifirstCycle_ = (sa_size_t)ai1; |
---|
| 575 | ilastCycle_ = (sa_size_t)ai2; |
---|
| 576 | |
---|
| 577 | |
---|
| 578 | //associate cycle number to index line in tuple |
---|
| 579 | sa_size_t nLines = scaTuple_->NbLines(); |
---|
| 580 | for(sa_size_t iL=0; iL<nLines; ++iL){ |
---|
| 581 | idCycleInTuple_[(sa_size_t)scaTuple_->GetCell(iL,"cycle")]=iL; |
---|
| 582 | } |
---|
| 583 | |
---|
| 584 | |
---|
| 585 | return rc; |
---|
| 586 | } |
---|
| 587 | //---------------------------------------------- |
---|
| 588 | int ProcessONOFFData::processCmd() throw(string) { |
---|
| 589 | int rc = 0; |
---|
| 590 | try { |
---|
| 591 | rc = ProcessBase::processCmd(); |
---|
| 592 | } |
---|
| 593 | catch (string s) { |
---|
| 594 | throw s; |
---|
| 595 | } |
---|
| 596 | if(debuglev_>0)cout << "Process Data" << endl; |
---|
| 597 | vector<string> modeList; |
---|
| 598 | modeList.push_back("On"); |
---|
| 599 | modeList.push_back("Off"); |
---|
| 600 | vector<string>::const_iterator iMode; |
---|
| 601 | |
---|
| 602 | uint_4 id; |
---|
| 603 | string tag; |
---|
| 604 | |
---|
| 605 | // |
---|
| 606 | //Process to get sucessively |
---|
| 607 | //Raw Spectra, |
---|
| 608 | //BAO Calibrated Spectra |
---|
| 609 | //and RT Calibrated Spectra |
---|
| 610 | //The pocesses are separated to allow intermediate save of results |
---|
| 611 | |
---|
| 612 | map< pair<string, sa_size_t>, TMatrix<r_4> > spectreCollect; |
---|
| 613 | map< pair<string, sa_size_t>, TMatrix<r_4> >::iterator iSpectre, iSpectreEnd; |
---|
| 614 | |
---|
| 615 | for (iMode = modeList.begin(); iMode != modeList.end(); ++iMode) { |
---|
| 616 | string mode = *iMode; |
---|
| 617 | if(debuglev_>0)cout << "Process RAW Mode " << mode << endl; |
---|
| 618 | |
---|
| 619 | //------------------------------------------ |
---|
| 620 | //Produce Raw spectra per cycle |
---|
| 621 | //------------------------------------------ |
---|
| 622 | |
---|
| 623 | string directoryName; |
---|
| 624 | list<string> listOfSpecFiles; |
---|
| 625 | list<string>::const_iterator iFile, iFileEnd; |
---|
| 626 | |
---|
| 627 | |
---|
| 628 | // |
---|
| 629 | //loop on cycles |
---|
| 630 | // |
---|
| 631 | for (sa_size_t icycle = ifirstCycle_; icycle <= ilastCycle_; icycle++) { |
---|
| 632 | //TOBE FIXED directoryName = "./" + sourceName_ + "/"+ dateOfRun_ + StringToLower(sourceName_) + "/" +mode + "/"; |
---|
| 633 | directoryName = "./" + mode + "/"; |
---|
| 634 | stringstream sicycle; |
---|
| 635 | sicycle << icycle; |
---|
| 636 | directoryName += spectraDirectory_ + sicycle.str() + "/"; |
---|
| 637 | |
---|
| 638 | //read directory |
---|
| 639 | listOfSpecFiles = ListOfFileInDir(directoryName,typeOfFile_); |
---|
| 640 | |
---|
| 641 | |
---|
| 642 | //compute mean of spectra created in a cycle |
---|
| 643 | if(debuglev_>0)cout << "compute mean for cycle " << icycle << endl; |
---|
| 644 | TMatrix<r_4> spectreMean(NUMBER_OF_CHANNELS,NUMBER_OF_FREQ); //implicit init to 0 |
---|
| 645 | iFileEnd = listOfSpecFiles.end(); |
---|
| 646 | r_4 nSpectres = 0; |
---|
| 647 | for (iFile = listOfSpecFiles.begin(); iFile != iFileEnd; ++iFile) { |
---|
| 648 | FitsInOutFile aSpectrum(*iFile,FitsInOutFile::Fits_RO); |
---|
| 649 | TMatrix<r_4> spectre(NUMBER_OF_CHANNELS,NUMBER_OF_FREQ); |
---|
| 650 | aSpectrum >> spectre; |
---|
| 651 | spectreMean += spectre; |
---|
| 652 | nSpectres++; |
---|
| 653 | }// end of for files |
---|
| 654 | if(nSpectres>0) spectreMean /= nSpectres; |
---|
| 655 | |
---|
| 656 | //save mean spectrum |
---|
| 657 | spectreCollect.insert( pair< pair<string,sa_size_t>, TMatrix<r_4> >(make_pair(mode,icycle),TMatrix<r_4>(spectreMean,false) )); |
---|
| 658 | }//end of for cycles |
---|
| 659 | }//end loop on mode for raw preocess |
---|
| 660 | |
---|
| 661 | if(debuglev_>1) {//save mean spectra on file |
---|
| 662 | cout << "Save mean raw spectra" << endl; |
---|
| 663 | string fileName; |
---|
| 664 | //TOBE FIXED fileName = "./" + sourceName_ + "/" + dateOfRun_ + "_" + StringToLower(sourceName_) + "_" + "dataRaw" + ".ppf"; |
---|
| 665 | fileName = "./dataRaw_" + dateOfRun_ + "_" + StringToLower(sourceName_) + ".ppf"; |
---|
| 666 | |
---|
| 667 | POutPersist fos(fileName); |
---|
| 668 | id=0; |
---|
| 669 | iSpectreEnd = spectreCollect.end(); |
---|
| 670 | for (iSpectre = spectreCollect.begin(); |
---|
| 671 | iSpectre != iSpectreEnd ; ++iSpectre, ++id) { |
---|
| 672 | tag = "specRaw"; |
---|
| 673 | stringstream sid; |
---|
| 674 | sid << id; |
---|
| 675 | tag += sid.str(); |
---|
| 676 | fos << PPFNameTag(tag) << iSpectre->second; |
---|
| 677 | } |
---|
| 678 | }//end of save fits |
---|
| 679 | |
---|
| 680 | |
---|
| 681 | |
---|
| 682 | for (iMode = modeList.begin(); iMode != modeList.end(); ++iMode) { |
---|
| 683 | string mode = *iMode; |
---|
| 684 | if(debuglev_>0)cout << "Process CALIB BAO Mode " << mode << endl; |
---|
| 685 | //------------------------------------------ |
---|
| 686 | // Correct Raw spectra for BAO calibration |
---|
| 687 | //------------------------------------------ |
---|
| 688 | //Read BAO calibration files |
---|
| 689 | TMatrix<r_4> calibBAOfactors; |
---|
| 690 | sa_size_t nr,nc; //values read |
---|
| 691 | bool first = true; |
---|
| 692 | |
---|
| 693 | for (sa_size_t iCh=0;iCh<NUMBER_OF_CHANNELS;++iCh){ |
---|
| 694 | string calibFileName = "./" + sourceName_ + "/" |
---|
| 695 | + dateOfRun_ + StringToLower(sourceName_) + "-" + mode + "-" + freqBAOCalibration_ + "MHz"; |
---|
| 696 | stringstream channel; |
---|
| 697 | channel << iCh; |
---|
| 698 | calibFileName += "-Ch" + channel.str() + "Cycles.txt"; |
---|
| 699 | if(debuglev_>0) cout << "Read file " << calibFileName << endl; |
---|
| 700 | ifstream ifs(calibFileName.c_str()); |
---|
| 701 | if ( ! ifs.is_open() ) { |
---|
| 702 | rc = 999; |
---|
| 703 | throw calibFileName + " cannot be opened..."; |
---|
| 704 | } |
---|
| 705 | TVector<r_4> aCalib; |
---|
| 706 | aCalib.ReadASCII(ifs,nr,nc); |
---|
| 707 | if(first){ |
---|
| 708 | first = false; |
---|
| 709 | calibBAOfactors.SetSize(NUMBER_OF_CHANNELS,nr); |
---|
| 710 | } |
---|
| 711 | calibBAOfactors( Range(iCh), Range::all() ) = aCalib.Transpose(); |
---|
| 712 | ifs.close(); |
---|
| 713 | }//end of loop on channels |
---|
| 714 | |
---|
| 715 | |
---|
| 716 | // |
---|
| 717 | //spectra corrected by BAO calibration factor |
---|
| 718 | //make it different on Channels and Cycles (1/06/2011) |
---|
| 719 | //warning cycles are numbered from 1,...,N |
---|
| 720 | // |
---|
| 721 | if(debuglev_>0)cout << "do calibration..." << endl; |
---|
| 722 | for (sa_size_t icycle = ifirstCycle_; icycle <= ilastCycle_; icycle++) { |
---|
| 723 | TMatrix<r_4> specmtx(spectreCollect[make_pair(mode,icycle)],true); //share the memory |
---|
| 724 | |
---|
| 725 | for (sa_size_t iCh=0;iCh<NUMBER_OF_CHANNELS;++iCh){ |
---|
| 726 | specmtx( Range(iCh), Range::all() ) /= calibBAOfactors(iCh,icycle-1); |
---|
| 727 | } |
---|
| 728 | } |
---|
| 729 | } //end loop mode for BAO calib |
---|
| 730 | |
---|
| 731 | if(debuglev_>1){ //save mean spectra BAO calibrated on file |
---|
| 732 | cout << "save calibrated BAO spectra" << endl; |
---|
| 733 | string fileName; |
---|
[514] | 734 | //TO BE FIXED fileName = "./" + sourceName_ + "/" + dateOfRun_ + "_" + StringToLower(sourceName_) + "_" + "dataBAOCalib" + ".ppf"; |
---|
| 735 | fileName = "./dataBAOCalib_" + dateOfRun_ + "_" + StringToLower(sourceName_) + ".ppf"; |
---|
| 736 | |
---|
[507] | 737 | POutPersist fos(fileName); |
---|
| 738 | iSpectreEnd = spectreCollect.end(); |
---|
| 739 | id=0; |
---|
| 740 | for (iSpectre = spectreCollect.begin();iSpectre != iSpectreEnd ; ++iSpectre, ++id) { |
---|
| 741 | tag = "specBAOCalib"; |
---|
| 742 | stringstream sid; |
---|
| 743 | sid << id; |
---|
| 744 | tag += sid.str(); |
---|
| 745 | fos << PPFNameTag(tag) << (*iSpectre).second; |
---|
| 746 | } |
---|
| 747 | }//end of save fits |
---|
| 748 | |
---|
| 749 | |
---|
| 750 | for (iMode = modeList.begin(); iMode != modeList.end(); ++iMode) { |
---|
| 751 | string mode = *iMode; |
---|
| 752 | if(debuglev_>0)cout << "Process CALIB RT Mode " << mode << endl; |
---|
| 753 | //------------------------------------------ |
---|
| 754 | // Correct BAO calib spectra for RT calibration |
---|
| 755 | //------------------------------------------ |
---|
| 756 | //Very Preliminary May-June 11 |
---|
| 757 | //coef RT @ 1346MHz Ouest - Est associees a Ch 0 et 1 |
---|
| 758 | r_4 calibRT[NUMBER_OF_CHANNELS] = {27.724, 22.543}; |
---|
| 759 | for (sa_size_t icycle = ifirstCycle_; icycle <= ilastCycle_; icycle++) { |
---|
| 760 | TMatrix<r_4> specmtx(spectreCollect[make_pair(mode,icycle)],true); //share the memory |
---|
| 761 | for (sa_size_t iCh=0;iCh<NUMBER_OF_CHANNELS;++iCh){ |
---|
| 762 | specmtx( Range(iCh), Range::all() ) *= calibRT[iCh]; |
---|
| 763 | } |
---|
| 764 | } |
---|
| 765 | }//end loop on mode RT calib |
---|
| 766 | |
---|
| 767 | {//save mean spectra BAO & RT calibrated on file |
---|
| 768 | if(debuglev_>0)cout << "save calibrated BAO & RT spectra" << endl; |
---|
| 769 | string fileName; |
---|
[514] | 770 | //TO BE FIXED fileName = "./" + sourceName_ + "/" + dateOfRun_ + "_" + StringToLower(sourceName_) + "_" + "dataBAORTCalib" + ".ppf"; |
---|
| 771 | fileName = "./dataBAORTCalib_" + dateOfRun_ + "_" + StringToLower(sourceName_) + ".ppf"; |
---|
[507] | 772 | POutPersist fos(fileName); |
---|
| 773 | iSpectreEnd = spectreCollect.end(); |
---|
| 774 | id = 0; |
---|
| 775 | for (iSpectre = spectreCollect.begin();iSpectre != iSpectreEnd ; ++iSpectre, ++id) { |
---|
| 776 | tag = "specBAORTCalib"; |
---|
| 777 | stringstream sid; |
---|
| 778 | sid << id; |
---|
| 779 | tag += sid.str(); |
---|
| 780 | fos << PPFNameTag(tag) << (*iSpectre).second; |
---|
| 781 | } |
---|
| 782 | }//end of save fits |
---|
| 783 | |
---|
| 784 | //------------------------------------------ |
---|
| 785 | // Perform ON-OFF |
---|
| 786 | //------------------------------------------ |
---|
| 787 | |
---|
| 788 | map< sa_size_t, TMatrix<r_4> > diffCollect; |
---|
| 789 | map< sa_size_t, TMatrix<r_4> >::iterator iDiff, iDiffEnd; |
---|
| 790 | |
---|
| 791 | TMatrix<r_4> diffMeanOnOff(NUMBER_OF_CHANNELS,NUMBER_OF_FREQ); //init zero |
---|
| 792 | r_4 nCycles = 0; |
---|
| 793 | for (sa_size_t icycle = ifirstCycle_; icycle <= ilastCycle_; icycle++) { |
---|
| 794 | nCycles++; |
---|
| 795 | TMatrix<r_4> specmtxOn(spectreCollect[make_pair(modeList[0],icycle)],false); //clone the memory |
---|
| 796 | TMatrix<r_4> specmtxOff(spectreCollect[make_pair(modeList[1],icycle)],false); //clone the memory |
---|
| 797 | TMatrix<r_4> diffOnOff = specmtxOn - specmtxOff; |
---|
| 798 | diffCollect.insert(pair< sa_size_t,TMatrix<r_4> >(icycle,TMatrix<r_4>(diffOnOff,false) )); |
---|
| 799 | diffMeanOnOff += diffOnOff; |
---|
| 800 | }//end loop on cycle |
---|
| 801 | if(nCycles>0) diffMeanOnOff/=nCycles; |
---|
| 802 | |
---|
| 803 | //exctract channels and do the mean |
---|
| 804 | TVector<r_4> meanOfChan(NUMBER_OF_FREQ); //implicitly init to 0 |
---|
| 805 | for (sa_size_t iCh=0; iCh<NUMBER_OF_CHANNELS; ++iCh) { |
---|
| 806 | meanOfChan += diffMeanOnOff.Row(iCh).Transpose(); |
---|
| 807 | } |
---|
| 808 | meanOfChan /= (r_4)NUMBER_OF_CHANNELS; |
---|
| 809 | |
---|
| 810 | |
---|
| 811 | |
---|
| 812 | {//save diff ON-OFF BAO & RT calibrated |
---|
| 813 | if(debuglev_>0)cout << "save ON-OFF spectra" << endl; |
---|
| 814 | string fileName; |
---|
[514] | 815 | //TO BE FIXED fileName = "./" + sourceName_ + "/" + dateOfRun_ + "_" + StringToLower(sourceName_) + "_" + "diffOnOff" + ".ppf"; |
---|
| 816 | fileName = "./diffOnOff_" + dateOfRun_ + "_" + StringToLower(sourceName_) + ".ppf"; |
---|
[507] | 817 | POutPersist fos(fileName); |
---|
| 818 | iDiffEnd = diffCollect.end(); |
---|
| 819 | id = 0; |
---|
| 820 | for (iDiff = diffCollect.begin();iDiff != iDiffEnd ; ++iDiff, id++) { |
---|
| 821 | tag = "specONOFF"; |
---|
| 822 | stringstream sid; |
---|
| 823 | sid << id; |
---|
| 824 | tag += sid.str(); |
---|
| 825 | fos << PPFNameTag(tag) << (*iDiff).second; |
---|
| 826 | } |
---|
| 827 | //save the mean also |
---|
| 828 | fos << PPFNameTag("specONOFFMean") << diffMeanOnOff; |
---|
| 829 | fos << PPFNameTag("specONOFF2ChanMean") << meanOfChan; |
---|
| 830 | }//end of save fits |
---|
| 831 | |
---|
| 832 | return rc; |
---|
| 833 | } //ProcessONOFFData::processCmd |
---|
| 834 | // |
---|
| 835 | //---------------------------------------------- |
---|
| 836 | // |
---|
| 837 | int ProcessGain::processCmd() throw(string) { |
---|
| 838 | int rc = 0; |
---|
| 839 | string msg = ""; |
---|
| 840 | |
---|
| 841 | try { |
---|
| 842 | rc = ProcessBase::processCmd(); |
---|
| 843 | } |
---|
| 844 | catch (string s) { |
---|
| 845 | throw s; |
---|
| 846 | } |
---|
| 847 | if(debuglev_>0)cout << "Process Gain" << endl; |
---|
| 848 | |
---|
| 849 | string directoryName; |
---|
| 850 | //TOBE FIXED directoryName = "./" + sourceName_ + "/"+ dateOfRun_ + StringToLower(sourceName_) + "/" +mode_ + "/"; |
---|
| 851 | //JEC 6/09/2011 numcycle_ repalced by ifirstCycle_ according to definition of numcycle_ and the fact that for GAIN 1 cycle is involved |
---|
| 852 | stringstream thegaincycle; |
---|
| 853 | thegaincycle << ifirstCycle_; |
---|
| 854 | directoryName = inputPath_ + "/" |
---|
| 855 | + sourceName_ + "/" + dateOfRun_ + StringToLower(sourceName_) + "/" |
---|
| 856 | + mode_ + "/" + spectraDirectory_ + thegaincycle.str() + "/"; |
---|
| 857 | |
---|
| 858 | list<string> listOfSpecFiles; |
---|
| 859 | list<string>::const_iterator iFile, iFileEnd; |
---|
| 860 | //read directory |
---|
| 861 | |
---|
| 862 | listOfSpecFiles = ListOfFileInDir(directoryName,typeOfFile_); |
---|
| 863 | |
---|
| 864 | //Mean power computed over the N channels to select the spectra for gain computation |
---|
| 865 | //The threshold is computed "on-line" as 1% of the difference (max power -min power) over the |
---|
| 866 | // the min power. |
---|
| 867 | //A possible alternative is to set an absolute value... |
---|
| 868 | if(debuglev_>0)cout << "compute mean poser spectra for files in " << directoryName << endl; |
---|
| 869 | iFileEnd = listOfSpecFiles.end(); |
---|
| 870 | map<string, r_4> meanpowerCollect; |
---|
| 871 | map<string, r_4>::const_iterator iMeanPow, iMeanPowEnd; |
---|
| 872 | |
---|
| 873 | for (iFile = listOfSpecFiles.begin(); iFile != iFileEnd; ++iFile) { |
---|
| 874 | FitsInOutFile aSpectrum(*iFile,FitsInOutFile::Fits_RO); |
---|
| 875 | TMatrix<r_4> spectre(NUMBER_OF_CHANNELS,NUMBER_OF_FREQ); |
---|
| 876 | aSpectrum >> spectre; |
---|
| 877 | meanpowerCollect[*iFile] = spectre.Sum()/spectre.Size(); |
---|
| 878 | }//end of for files |
---|
| 879 | pair<string, r_4> minelement = *min_element(meanpowerCollect.begin(),meanpowerCollect.end(),compare); |
---|
| 880 | pair<string, r_4> maxelement = *max_element(meanpowerCollect.begin(),meanpowerCollect.end(),compare); |
---|
| 881 | if(debuglev_>1){ |
---|
| 882 | cout << "meanpowerCollect has " << meanpowerCollect.size() << " spectra registered" << endl; |
---|
| 883 | cout << "find min mean power "<<minelement.second << " for " << minelement.first << endl; |
---|
| 884 | cout << "find max mean power "<<maxelement.second << " for " << maxelement.first << endl; |
---|
| 885 | } |
---|
| 886 | r_4 threshold = minelement.second + 0.01*(maxelement.second-minelement.second); |
---|
| 887 | if(debuglev_>1){ |
---|
| 888 | cout << "threshold found at " << threshold <<endl; |
---|
| 889 | } |
---|
| 890 | |
---|
| 891 | TMatrix<r_4> spectreMean(NUMBER_OF_CHANNELS,NUMBER_OF_FREQ); //implicit init to 0 |
---|
| 892 | r_4 nSpectres = 0; |
---|
| 893 | iMeanPowEnd = meanpowerCollect.end(); |
---|
| 894 | for (iMeanPow = meanpowerCollect.begin(); iMeanPow != iMeanPowEnd; ++iMeanPow) { |
---|
| 895 | if ( iMeanPow->second <= threshold ) { |
---|
| 896 | //TODO avoid the reloading of the file may speed up |
---|
| 897 | FitsInOutFile aSpectrum(iMeanPow->first,FitsInOutFile::Fits_RO); |
---|
| 898 | TMatrix<r_4> spectre(NUMBER_OF_CHANNELS,NUMBER_OF_FREQ); |
---|
| 899 | aSpectrum >> spectre; |
---|
| 900 | spectreMean += spectre; |
---|
| 901 | nSpectres++; |
---|
| 902 | } |
---|
| 903 | } |
---|
| 904 | if(debuglev_>1){ |
---|
| 905 | cout << "Number of files selected for gain " << nSpectres <<endl; |
---|
| 906 | } |
---|
| 907 | if(nSpectres>0) { |
---|
| 908 | spectreMean /= nSpectres; |
---|
| 909 | } else { |
---|
| 910 | stringstream tmp; |
---|
| 911 | tmp << threshold; |
---|
| 912 | msg = "Gain: cannot find a spectra above threshold value =" + tmp.str() + " ... FATAL"; |
---|
| 913 | throw msg; |
---|
| 914 | } |
---|
| 915 | |
---|
| 916 | //Save gain spectra |
---|
| 917 | { |
---|
| 918 | //use ! to override the file: special features of cfitsio library |
---|
| 919 | string fileName; |
---|
| 920 | //TOBE FIXED fileName = "!./" + sourceName_ + "/gain_" + dateOfRun_ + "_" + StringToLower(sourceName_) + ".fits"; |
---|
| 921 | fileName = "!"+ outputPath_ + "/gain_" + dateOfRun_ + "_" + StringToLower(sourceName_) + ".fits"; |
---|
| 922 | if(debuglev_>1){ |
---|
| 923 | cout << "save gains in " << fileName << endl; |
---|
| 924 | } |
---|
| 925 | FitsInOutFile fos(fileName, FitsInOutFile::Fits_Create); |
---|
| 926 | fos << spectreMean; |
---|
| 927 | } |
---|
| 928 | //save mean power values |
---|
| 929 | { |
---|
| 930 | vector<r_4> tmp; |
---|
| 931 | for (iFile = listOfSpecFiles.begin(); iFile != iFileEnd; ++iFile) { |
---|
| 932 | tmp.push_back(meanpowerCollect[*iFile]); |
---|
| 933 | } |
---|
| 934 | string fileName; |
---|
| 935 | //TOBE FIXED fileName = "./" + sourceName_ + "/gain_monitor_" + dateOfRun_ |
---|
| 936 | fileName = outputPath_ + "/gain_monitor_" + dateOfRun_ + "_" + StringToLower(sourceName_) + ".ppf"; |
---|
| 937 | POutPersist fos(fileName); |
---|
| 938 | TVector<r_4> tvtmp(tmp); |
---|
| 939 | fos.PutObject(tvtmp,"gainmoni"); |
---|
| 940 | } |
---|
| 941 | |
---|
| 942 | |
---|
| 943 | cout << "OK gain finished" <<endl; |
---|
| 944 | return rc; |
---|
| 945 | }//ProcessGain::processCmd |
---|
| 946 | // |
---|
| 947 | //---------------------------------------------- |
---|
| 948 | // |
---|
| 949 | int ProcessCalibration::processCmd() throw(string) { |
---|
| 950 | int rc = 0; |
---|
| 951 | string msg = ""; |
---|
| 952 | |
---|
| 953 | try { |
---|
| 954 | rc = ProcessBase::processCmd(); |
---|
| 955 | } |
---|
| 956 | catch (string s) { |
---|
| 957 | throw s; |
---|
| 958 | } |
---|
| 959 | if(debuglev_>0)cout << "Process Calibration with option "<< option_ << endl; |
---|
| 960 | |
---|
| 961 | vector<string> modeList; |
---|
| 962 | modeList.push_back("On"); |
---|
| 963 | modeList.push_back("Off"); |
---|
| 964 | |
---|
| 965 | r_8 t0absolute = -1; //TIMEWIN of the first spectra used |
---|
| 966 | r_8 timeTag0 = -1; //MEANTT, mean TIME TAG of the first paquet window |
---|
| 967 | bool first = true; // for initialisation |
---|
| 968 | |
---|
| 969 | // Power Tuple |
---|
| 970 | // mode, cycle, time, {Ch0, ... ,ChN} mean poser in the range [f0-Bw/2, f0+Bw/2] |
---|
| 971 | vector<string> varPowerTupleName; //ntuple variable naming |
---|
| 972 | varPowerTupleName.push_back("mode"); |
---|
| 973 | varPowerTupleName.push_back("cycle"); |
---|
| 974 | varPowerTupleName.push_back("time"); |
---|
| 975 | for (sa_size_t iCh=0; iCh<NUMBER_OF_CHANNELS;++iCh){ |
---|
| 976 | stringstream tmp; |
---|
| 977 | tmp << iCh; |
---|
| 978 | varPowerTupleName.push_back("Ch"+tmp.str()); |
---|
| 979 | } |
---|
| 980 | r_4 valPowerTuple[varPowerTupleName.size()]; |
---|
| 981 | NTuple powerEvolution(varPowerTupleName); |
---|
| 982 | |
---|
| 983 | |
---|
| 984 | //----------------- |
---|
| 985 | //Start real process |
---|
| 986 | //------------------ |
---|
| 987 | for (size_t iMode = 0; iMode < modeList.size(); ++iMode) { |
---|
| 988 | string mode = modeList[iMode]; |
---|
| 989 | if(debuglev_>0)cout << "Process Calibration for Mode " << mode << endl; |
---|
| 990 | |
---|
| 991 | //initialize the start of each calibration procedure given by the RT SCA file |
---|
| 992 | //see ProcessBase::processCmd for the structure of the sca file |
---|
| 993 | string scaStartCalibName = "stcal"+mode; |
---|
| 994 | sa_size_t idStartCalib = scaTuple_->ColumnIndex(scaStartCalibName); |
---|
| 995 | |
---|
| 996 | string directoryName; |
---|
| 997 | list<string> listOfSpecFiles; |
---|
| 998 | list<string>::const_iterator iFile, iFileEnd; |
---|
| 999 | // |
---|
| 1000 | //loop on cycles |
---|
| 1001 | // |
---|
| 1002 | for (sa_size_t icycle = ifirstCycle_; icycle <= ilastCycle_; icycle++) { |
---|
| 1003 | |
---|
| 1004 | directoryName = inputPath_ + "/" |
---|
| 1005 | + sourceName_ + "/"+ dateOfRun_ + StringToLower(sourceName_) + "/" +mode + "/"; |
---|
| 1006 | stringstream sicycle; |
---|
| 1007 | sicycle << icycle; |
---|
| 1008 | directoryName += spectraDirectory_ + sicycle.str() + "/"; |
---|
| 1009 | |
---|
| 1010 | //read directory |
---|
| 1011 | listOfSpecFiles = ListOfFileInDir(directoryName,typeOfFile_); |
---|
| 1012 | |
---|
| 1013 | iFileEnd = listOfSpecFiles.end(); |
---|
| 1014 | DVList header; |
---|
| 1015 | TMatrix<r_4> spectre(NUMBER_OF_CHANNELS,NUMBER_OF_FREQ); //implicit init to 0 |
---|
| 1016 | |
---|
| 1017 | for (iFile = listOfSpecFiles.begin(); iFile != iFileEnd; ++iFile) { |
---|
| 1018 | FitsInOutFile aSpectrum(*iFile,FitsInOutFile::Fits_RO); |
---|
| 1019 | aSpectrum.GetHeaderRecords(header); |
---|
| 1020 | aSpectrum >> spectre; |
---|
| 1021 | |
---|
| 1022 | if(first){//initialise the timer |
---|
| 1023 | first = false; |
---|
| 1024 | t0absolute = header.GetD("TIMEWIN")/1000.; |
---|
| 1025 | timeTag0 = header.GetD("MEANTT"); |
---|
| 1026 | if (debuglev_>1){ |
---|
| 1027 | cout << "debug Header of " << *iFile << endl; |
---|
| 1028 | cout << "TIMEWIN = " << setprecision(12) << t0absolute << " " |
---|
| 1029 | << "MEANTT = " << setprecision(12) << timeTag0 << endl; |
---|
| 1030 | } |
---|
| 1031 | }//end init timer |
---|
| 1032 | |
---|
| 1033 | //Set time of current file |
---|
| 1034 | //Add to the non-precise absolute origin an precise increment |
---|
| 1035 | r_4 timeTag = t0absolute + (header.GetD("MEANTT") - timeTag0); |
---|
| 1036 | int index=0; |
---|
| 1037 | valPowerTuple[index++] = iMode; |
---|
| 1038 | valPowerTuple[index++] = icycle; |
---|
| 1039 | valPowerTuple[index++] = timeTag-scaTuple_->GetCell(idCycleInTuple_[icycle],idStartCalib); //take the RT time start as refernce |
---|
| 1040 | |
---|
| 1041 | //Compute the mean power of the two channel (separatly) in the range [f-bw/2, f+bw/2] |
---|
| 1042 | for (sa_size_t iCh=0; iCh<NUMBER_OF_CHANNELS;++iCh){ |
---|
| 1043 | TMatrix<r_4> tmp(spectre(Range(iCh),Range(lowerFreqBin_,upperFreqBin_)),false); |
---|
| 1044 | r_4 mean = tmp.Sum()/(r_4)tmp.Size(); |
---|
| 1045 | valPowerTuple[index++] = mean; |
---|
| 1046 | }//end of channel loop |
---|
| 1047 | |
---|
| 1048 | //Fill Tuple |
---|
| 1049 | powerEvolution.Fill(valPowerTuple); |
---|
| 1050 | }//end of files loop |
---|
| 1051 | }//end of cycles loop |
---|
| 1052 | }//end of mode loop |
---|
| 1053 | |
---|
| 1054 | //store power evolution Tuple |
---|
| 1055 | if(debuglev_>0){ |
---|
| 1056 | cout << "ProcessCalibration::processCmd: dump powerEvolution tuple" << endl; |
---|
| 1057 | powerEvolution.Show(cout); |
---|
| 1058 | } |
---|
| 1059 | // |
---|
| 1060 | //Compute Calibration Coefficients as function of mode/cycle/channels |
---|
| 1061 | // |
---|
| 1062 | |
---|
| 1063 | //Tsys,Incremant Intensity... Tuple |
---|
| 1064 | //mode mode cycle [(tsys0,dint0),...,(tsysN,dintN)] |
---|
| 1065 | vector<string> varCalibTupleName; |
---|
| 1066 | varCalibTupleName.push_back("mode"); |
---|
| 1067 | varCalibTupleName.push_back("cycle"); |
---|
| 1068 | for (sa_size_t iCh=0; iCh<NUMBER_OF_CHANNELS;++iCh){ |
---|
| 1069 | stringstream tmp; |
---|
| 1070 | tmp << iCh; |
---|
| 1071 | varCalibTupleName.push_back("tsys"+tmp.str()); |
---|
| 1072 | varCalibTupleName.push_back("dint"+tmp.str()); |
---|
| 1073 | } |
---|
| 1074 | r_4 valCalibTuple[varCalibTupleName.size()]; |
---|
| 1075 | NTuple calibEvolution(varCalibTupleName); |
---|
| 1076 | |
---|
| 1077 | // select time E [twin0,twin1] U [twin2,twin3] for Tsys |
---|
| 1078 | // time unit = second |
---|
| 1079 | const r_4 twin0 = -3.; |
---|
| 1080 | const r_4 twin1 = -1.; |
---|
| 1081 | const r_4 twin2 = 6.; |
---|
| 1082 | const r_4 twin3 = 8; |
---|
| 1083 | const r_4 thresholdFactor = 0.80; //80% of the diff. Max-Min intensity |
---|
| 1084 | |
---|
| 1085 | sa_size_t inModeIdx = powerEvolution.ColumnIndex("mode"); |
---|
| 1086 | sa_size_t inCycleIdx= powerEvolution.ColumnIndex("cycle"); |
---|
| 1087 | sa_size_t inTimeIdx = powerEvolution.ColumnIndex("time"); |
---|
| 1088 | sa_size_t inOffsetCh0 = powerEvolution.ColumnIndex("Ch0"); //nb Ch0 position in the powerEvolution tuple |
---|
| 1089 | if(debuglev_>1) cout << "DEBUG: in Idx: (" |
---|
| 1090 | << inModeIdx << ", " |
---|
| 1091 | << inCycleIdx << ", " |
---|
| 1092 | << inTimeIdx << ", " |
---|
| 1093 | << inOffsetCh0 << ")" |
---|
| 1094 | << endl; |
---|
| 1095 | |
---|
| 1096 | |
---|
| 1097 | size_t outModeIdx = calibEvolution.ColumnIndex("mode"); |
---|
| 1098 | size_t outCycleIdx= calibEvolution.ColumnIndex("cycle"); |
---|
| 1099 | size_t outOffsetCh0 = calibEvolution.ColumnIndex("tsys0"); //nb Ch0 position in the monitor tuple |
---|
| 1100 | size_t outNDataPerCh= 2; |
---|
| 1101 | if(debuglev_>1) cout << "DEBUG: out Idx: (" |
---|
| 1102 | << outModeIdx << ", " |
---|
| 1103 | << outCycleIdx << ", " |
---|
| 1104 | << outOffsetCh0 << ")" |
---|
| 1105 | << endl; |
---|
| 1106 | |
---|
| 1107 | sa_size_t nPowerEvolEntry = powerEvolution.NEntry(); |
---|
| 1108 | double minMode; |
---|
| 1109 | double maxMode; |
---|
| 1110 | powerEvolution.GetMinMax("mode",minMode,maxMode); |
---|
| 1111 | double minCycleNum; |
---|
| 1112 | double maxCycleNum; |
---|
| 1113 | powerEvolution.GetMinMax("cycle",minCycleNum,maxCycleNum); |
---|
| 1114 | if(debuglev_>1) cout << "DEBUG mode ("<<minMode<<","<<maxMode<<")\n" |
---|
| 1115 | << "cycle ("<<minCycleNum<<","<<maxCycleNum<<")" |
---|
| 1116 | << endl; |
---|
| 1117 | |
---|
| 1118 | r_4* aPowerEvolEntry; // a ligne of the powerEvolution tuple |
---|
| 1119 | // r_4* aPowerEvolEntry = new r_4[powerEvolution.NbColumns()]; // a ligne of the powerEvolution tuple |
---|
| 1120 | |
---|
| 1121 | r_4 minMean; |
---|
| 1122 | r_4 maxMean; |
---|
| 1123 | |
---|
| 1124 | for (size_t iMode = (size_t)minMode; iMode <= (size_t)maxMode; iMode++){ |
---|
| 1125 | for (size_t iCycle = (size_t)minCycleNum; iCycle <= (size_t)maxCycleNum; iCycle++ ){ |
---|
| 1126 | if(debuglev_>1) cout<<"DEBUG >>>>>>> mode/cycle: " << iMode << "/" << iCycle << endl; |
---|
| 1127 | |
---|
| 1128 | valCalibTuple[outModeIdx]=iMode; |
---|
| 1129 | valCalibTuple[outCycleIdx]=iCycle; |
---|
| 1130 | // |
---|
| 1131 | //Compute the Min && Max value of each Ch<i> data |
---|
| 1132 | if(debuglev_>1) cout<<"DEBUG compute Min and Max for each channels" << endl; |
---|
| 1133 | // |
---|
| 1134 | TVector<r_4> chMean[NUMBER_OF_CHANNELS]; |
---|
| 1135 | for (sa_size_t iCh=0;iCh<NUMBER_OF_CHANNELS;iCh++){ |
---|
| 1136 | chMean[iCh].SetSize(nPowerEvolEntry); |
---|
| 1137 | } |
---|
| 1138 | for (sa_size_t ie=0; ie<nPowerEvolEntry; ie++){ |
---|
| 1139 | aPowerEvolEntry = powerEvolution.GetVec(ie); |
---|
| 1140 | if ( (size_t)aPowerEvolEntry[inModeIdx] == iMode && (size_t)aPowerEvolEntry[inCycleIdx] == iCycle ){ |
---|
| 1141 | for (sa_size_t iCh=0;iCh<NUMBER_OF_CHANNELS;iCh++){ |
---|
| 1142 | chMean[iCh](ie) = aPowerEvolEntry[iCh+inOffsetCh0]; |
---|
| 1143 | }//end cut |
---|
| 1144 | } |
---|
| 1145 | }//eo loop on tuple entries |
---|
| 1146 | for (sa_size_t iCh=0;iCh<NUMBER_OF_CHANNELS;iCh++){ |
---|
| 1147 | // |
---|
| 1148 | //select values to compute background Tsys |
---|
| 1149 | if(debuglev_>1) { |
---|
| 1150 | cout<< "DEBUG >>>> Ch[" << iCh << "]" << endl; |
---|
| 1151 | cout<< "DEBUG select values to compute background Tsys " << endl; |
---|
| 1152 | } |
---|
| 1153 | // |
---|
| 1154 | |
---|
| 1155 | std::vector<r_4> lowerInt; |
---|
| 1156 | for (sa_size_t ie=0; ie<nPowerEvolEntry; ie++){ |
---|
| 1157 | aPowerEvolEntry = powerEvolution.GetVec(ie); |
---|
| 1158 | if ( (size_t)aPowerEvolEntry[inModeIdx] == iMode && (size_t)aPowerEvolEntry[inCycleIdx] == iCycle ){ |
---|
| 1159 | r_4 time = aPowerEvolEntry[inTimeIdx]; |
---|
| 1160 | if ( (time >= twin0 && time <= twin1) || |
---|
| 1161 | (time >= twin2 && time <= twin3) |
---|
| 1162 | ) lowerInt.push_back(aPowerEvolEntry[iCh+inOffsetCh0]); |
---|
| 1163 | }//end cut |
---|
| 1164 | } //end loop entries |
---|
| 1165 | // |
---|
| 1166 | //compute the Tsys |
---|
| 1167 | if(debuglev_>1) cout <<"DEBUG compute Tsys" << endl; |
---|
| 1168 | // |
---|
| 1169 | std::nth_element(lowerInt.begin(), |
---|
| 1170 | lowerInt.begin()+lowerInt.size()/2, |
---|
| 1171 | lowerInt.end()); |
---|
| 1172 | r_4 tsys = *(lowerInt.begin()+lowerInt.size()/2); |
---|
| 1173 | if(debuglev_>1) cout << "DEBUG tsys["<<iCh<<"] : " << tsys <<endl; |
---|
| 1174 | // |
---|
| 1175 | //set the threshold for DAB detection |
---|
| 1176 | // |
---|
| 1177 | chMean[iCh].MinMax(minMean,maxMean); |
---|
| 1178 | minMean = (tsys > minMean) ? tsys : minMean; //pb of empty vector |
---|
| 1179 | if(debuglev_>1) cout << "DEBUG min["<<iCh<<"] : " << minMean |
---|
| 1180 | << " max["<<iCh<<"] : " << maxMean |
---|
| 1181 | <<endl; |
---|
| 1182 | r_4 deltathres = thresholdFactor * (maxMean-minMean); |
---|
| 1183 | r_4 thres = tsys + deltathres; |
---|
| 1184 | if(debuglev_>1) cout << "DEBUG thres["<<iCh<<"] : " << thres <<endl; |
---|
| 1185 | // |
---|
| 1186 | //collect upper part of the DAB |
---|
| 1187 | if(debuglev_>1) cout <<"DEBUG collect upper part of the DAB" << endl; |
---|
| 1188 | // |
---|
| 1189 | std::vector<r_4> upperInt; |
---|
| 1190 | for (sa_size_t ie=0; ie<nPowerEvolEntry; ie++){ |
---|
| 1191 | aPowerEvolEntry = powerEvolution.GetVec(ie); |
---|
| 1192 | if ( (size_t)aPowerEvolEntry[inModeIdx] == iMode && (size_t)aPowerEvolEntry[inCycleIdx] == iCycle ){ |
---|
| 1193 | r_4 mean = aPowerEvolEntry[iCh+inOffsetCh0]; |
---|
| 1194 | if (mean >= thres) upperInt.push_back(mean); |
---|
| 1195 | }//end cut |
---|
| 1196 | }//eo loop on channels |
---|
| 1197 | // |
---|
| 1198 | //compute adjacent differences to detect the 2 DAB levels |
---|
| 1199 | // |
---|
| 1200 | if(debuglev_>1) cout << "(DEBUG )size upper [" << iCh << "]: " << upperInt.size() <<endl; |
---|
| 1201 | std::vector<r_4> upperIntAdjDiff(upperInt.size()); |
---|
| 1202 | std::adjacent_difference(upperInt.begin(), |
---|
| 1203 | upperInt.end(), |
---|
| 1204 | upperIntAdjDiff.begin()); |
---|
| 1205 | // |
---|
| 1206 | //Search the 2 DAB states |
---|
| 1207 | if(debuglev_>1) cout<<"DEBUG Search the 2 DAB states" << endl; |
---|
| 1208 | // |
---|
| 1209 | std::vector<r_4> upIntState[2]; |
---|
| 1210 | int state=-1; |
---|
| 1211 | for (size_t i=1;i<upperInt.size();i++) {//skip first value |
---|
| 1212 | if (fabs(upperIntAdjDiff[i])<upperInt[i]*0.010) { |
---|
| 1213 | if(state == -1) state=0; |
---|
| 1214 | if(state == -2) state=1; |
---|
| 1215 | upIntState[state].push_back(upperInt[i]); |
---|
| 1216 | } else { |
---|
| 1217 | if (state == 0) state=-2; |
---|
| 1218 | } |
---|
| 1219 | } |
---|
| 1220 | // |
---|
| 1221 | //Take the mean of the median values of each levels |
---|
| 1222 | if(debuglev_>1)cout << "DEBUG mean of the median values of each levels" << endl; |
---|
| 1223 | // |
---|
| 1224 | r_4 meanUpper = 0; |
---|
| 1225 | r_4 nval = 0; |
---|
| 1226 | for (int i=0;i<2;i++) { |
---|
| 1227 | if (!upIntState[i].empty()) { |
---|
| 1228 | std::nth_element(upIntState[i].begin(), |
---|
| 1229 | upIntState[i].begin()+upIntState[i].size()/2, |
---|
| 1230 | upIntState[i].end()); |
---|
| 1231 | meanUpper += *(upIntState[i].begin()+upIntState[i].size()/2); |
---|
| 1232 | nval++; |
---|
| 1233 | } |
---|
| 1234 | } |
---|
| 1235 | meanUpper /= nval; |
---|
| 1236 | // |
---|
| 1237 | //Finaly the increase of power due to the DAB is: |
---|
| 1238 | // |
---|
| 1239 | r_4 deltaInt = meanUpper - tsys; |
---|
| 1240 | if(debuglev_>1) cout << "DEBUG deltaInt["<<iCh<<"] : " << deltaInt <<endl; |
---|
| 1241 | // |
---|
| 1242 | //Save for monitoring and final calibration operations |
---|
| 1243 | // |
---|
| 1244 | valCalibTuple[outOffsetCh0+outNDataPerCh*iCh] = tsys; |
---|
| 1245 | valCalibTuple[outOffsetCh0+outNDataPerCh*iCh+1] = deltaInt; |
---|
| 1246 | }//end loop on channels |
---|
| 1247 | if(debuglev_>1) cout<<"DEBUG Fill the calibEvolution tuple" << endl; |
---|
| 1248 | calibEvolution.Fill(valCalibTuple); |
---|
| 1249 | }//eo loop on Cycles |
---|
| 1250 | }//eo loop on Modes |
---|
| 1251 | // |
---|
| 1252 | //store calibration evolution Tuple |
---|
| 1253 | // |
---|
| 1254 | if(debuglev_>0){ |
---|
| 1255 | cout << "ProcessCalibration::processCmd: dump calibEvolution tuple" << endl; |
---|
| 1256 | calibEvolution.Show(cout); |
---|
| 1257 | } |
---|
| 1258 | // |
---|
| 1259 | //Compute the means per channel of the calibration coefficients (deltaInt) |
---|
| 1260 | //and save cycle based Calibration Ctes in file named as |
---|
| 1261 | // <source>-<date>-<mode>-<fcalib>MHz-Ch<channel>Cycles.txt |
---|
| 1262 | // format <cycle> <coef> |
---|
| 1263 | //the means are stored in files |
---|
| 1264 | // <source>-<date>-<mode>-<fcalib>MHz-All.txt |
---|
| 1265 | // format <channel> <coef> |
---|
| 1266 | // |
---|
| 1267 | sa_size_t nModes = (sa_size_t)(maxMode - minMode) + 1; |
---|
| 1268 | string calibCoefFileName; |
---|
| 1269 | ofstream calibMeanCoefFile[nModes]; //Mean over cycles |
---|
| 1270 | ofstream calibCoefFile[nModes][NUMBER_OF_CHANNELS]; //cycle per cycle |
---|
| 1271 | for (sa_size_t iMode=0; iMode<nModes; iMode++){ |
---|
| 1272 | //The file for the Means Coeff. |
---|
| 1273 | calibCoefFileName = outputPath_ + "/calib_" |
---|
| 1274 | + dateOfRun_ + "_" + StringToLower(sourceName_) + "_" |
---|
| 1275 | + modeList[iMode] + "_" |
---|
| 1276 | + freqBAOCalibration_ + "MHz-All.txt"; |
---|
| 1277 | calibMeanCoefFile[iMode].open(calibCoefFileName.c_str()); |
---|
| 1278 | //The file for the cycle per cycle Coeff. |
---|
| 1279 | for (sa_size_t iCh=0; iCh<NUMBER_OF_CHANNELS; iCh++){ |
---|
| 1280 | stringstream chString; |
---|
| 1281 | chString << iCh; |
---|
| 1282 | calibCoefFileName = outputPath_ + "/calib_" |
---|
| 1283 | + dateOfRun_ + "_" + StringToLower(sourceName_) + "_" |
---|
| 1284 | + modeList[iMode] + "_" |
---|
| 1285 | + freqBAOCalibration_ + "MHz-Ch" + chString.str() + "Cycles.txt"; |
---|
| 1286 | calibCoefFile[iMode][iCh].open(calibCoefFileName.c_str()); |
---|
| 1287 | } |
---|
| 1288 | } |
---|
| 1289 | |
---|
| 1290 | r_4* aCalibEvolEntry; |
---|
| 1291 | sa_size_t nCalibEvolEntry = calibEvolution.NEntry(); |
---|
| 1292 | |
---|
| 1293 | TMatrix<r_4> meanCalibCoef(nModes,NUMBER_OF_CHANNELS); //by default init to 0 |
---|
| 1294 | TMatrix<r_4> nData4Mean(nModes,NUMBER_OF_CHANNELS); |
---|
| 1295 | |
---|
| 1296 | //READ the calibration tuple, fill the array for mean and write to ascii file |
---|
| 1297 | for (sa_size_t ie=0; ie<nCalibEvolEntry; ie++){ |
---|
| 1298 | aCalibEvolEntry = calibEvolution.GetVec(ie); |
---|
| 1299 | if(debuglev_>1){ |
---|
| 1300 | cout << "DEBUG mode/cycle/Coef " |
---|
| 1301 | << aCalibEvolEntry[outModeIdx] << " " |
---|
| 1302 | << aCalibEvolEntry[outCycleIdx] << " "; |
---|
| 1303 | } |
---|
| 1304 | for (sa_size_t iCh=0; iCh<NUMBER_OF_CHANNELS; iCh++){ |
---|
| 1305 | if(debuglev_>1) cout << aCalibEvolEntry[outOffsetCh0+outNDataPerCh*iCh+1] << " "; // for debug |
---|
| 1306 | sa_size_t currentMode = (sa_size_t)(aCalibEvolEntry[outModeIdx] - minMode); //ok even if minMode <> 0 |
---|
| 1307 | nData4Mean(currentMode,iCh)++; |
---|
| 1308 | meanCalibCoef(currentMode,iCh) += aCalibEvolEntry[outOffsetCh0+outNDataPerCh*iCh+1]; |
---|
| 1309 | |
---|
| 1310 | calibCoefFile[currentMode][iCh] << aCalibEvolEntry[outCycleIdx] << " " |
---|
| 1311 | << setprecision(12) |
---|
| 1312 | << aCalibEvolEntry[outOffsetCh0+outNDataPerCh*iCh+1] |
---|
| 1313 | << endl; |
---|
| 1314 | } |
---|
| 1315 | if(debuglev_>1) cout << endl; //for debug |
---|
| 1316 | } |
---|
| 1317 | |
---|
| 1318 | //Perform means: true means that div per 0 is treated (slower but safer) |
---|
| 1319 | meanCalibCoef.Div(nData4Mean,true); |
---|
| 1320 | |
---|
| 1321 | if(debuglev_>0){ |
---|
| 1322 | cout << "DEBUG nData4Mean" << endl; |
---|
| 1323 | nData4Mean.Print(cout); |
---|
| 1324 | cout << "DEBUG meanCalibCoef (averaged)" << endl; |
---|
| 1325 | meanCalibCoef.Print(cout); |
---|
| 1326 | } |
---|
| 1327 | |
---|
| 1328 | //Save means Coef |
---|
| 1329 | for (sa_size_t iMode=0; iMode<nModes; iMode++){ |
---|
| 1330 | for (sa_size_t iCh=0; iCh<NUMBER_OF_CHANNELS; iCh++){ |
---|
| 1331 | calibMeanCoefFile[iMode] << setprecision(12) |
---|
| 1332 | << meanCalibCoef(iMode,iCh) |
---|
| 1333 | << endl; |
---|
| 1334 | } |
---|
| 1335 | } |
---|
| 1336 | |
---|
| 1337 | //Save Monitor File |
---|
| 1338 | { |
---|
| 1339 | string fileName = outputPath_ + "/calib_monitor_" + dateOfRun_ + "_" + StringToLower(sourceName_) + ".ppf"; |
---|
| 1340 | POutPersist calibMonitorFile(fileName); |
---|
| 1341 | calibMonitorFile << PPFNameTag("powermoni") << powerEvolution; |
---|
| 1342 | calibMonitorFile << PPFNameTag("calibmoni") << calibEvolution; |
---|
| 1343 | } |
---|
| 1344 | |
---|
| 1345 | //Clean & Return |
---|
| 1346 | for (sa_size_t iMode=0; iMode<nModes; iMode++){ |
---|
| 1347 | calibMeanCoefFile[iMode].close(); |
---|
| 1348 | for (sa_size_t iCh=0; iCh<NUMBER_OF_CHANNELS; iCh++){ |
---|
| 1349 | calibCoefFile[iMode][iCh].close(); |
---|
| 1350 | } |
---|
| 1351 | } |
---|
| 1352 | |
---|
| 1353 | cout << "Ok calibration finished" << endl; |
---|
| 1354 | return rc; |
---|
| 1355 | }//ProcessCalibration::processCmd |
---|
| 1356 | |
---|