[507] | 1 | #!/bin/sh |
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| 2 | #Get SCA file and summary + transformed date file |
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| 3 | # |
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| 4 | DATE=/bin/date |
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| 5 | GREP=/bin/grep |
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| 6 | AWK=/bin/awk |
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| 7 | ECHO=/bin/echo |
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| 8 | TR=/usr/bin/tr |
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| 9 | MKDIR=/bin/mkdir |
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| 10 | CAT=/bin/cat |
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| 11 | PRINTF=/usr/bin/printf |
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| 12 | RM=/bin/rm |
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| 13 | LS=/bin/ls |
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| 14 | DefaultIFS=$' \t\n' |
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| 15 | IFS=$DefaultIFS |
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| 16 | |
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| 17 | scriptName="`basename $0`" |
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| 18 | $ECHO "Processing script ${scriptName} at `date`" |
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| 19 | |
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| 20 | |
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| 21 | if [ ! $# = 2 ]; then |
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| 22 | $ECHO "usage: ${script |
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| 23 | Name} <source:ex. Abell85> <date:YYYYMMDD>" |
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| 24 | touch ${tmppublicpath}/getscafiles.finished |
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| 25 | exit 0 |
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| 26 | fi |
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| 27 | |
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| 28 | # Irods environment settings |
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| 29 | #export PATH=$PATH:/home/bao/irods2.5_LinuxSL5 |
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| 30 | . /usr/local/shared/bin/irods_env.sh -noverbose |
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| 31 | |
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| 32 | |
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| 33 | sourceRadio=$1 |
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| 34 | srclower=`${ECHO} ${sourceRadio} | ${TR} "[:upper:]" "[:lower:]" ` |
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| 35 | dateDAQ=$2 |
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| 36 | |
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| 37 | |
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| 38 | #Path to public backupable path |
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| 39 | publicpath="/afs/in2p3.fr/home/c/campagne/public" |
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| 40 | |
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| 41 | #temporary files to synchronize scripts |
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| 42 | tmppublicpath="/sps/baoradio/AmasNancay" |
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| 43 | $LS -l ${tmppublicpath} > /dev/null |
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| 44 | |
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| 45 | |
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| 46 | #Path where the job will do temporary IO |
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| 47 | if [ ${ENVIRONMENT} == "INTERACTIVE" ]; then |
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| 48 | iojobpath="/sps/baoradio/AmasNancay/JEC" |
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| 49 | $MKDIR -p $iojobpath |
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| 50 | elif [ ${ENVIRONMENT} == "BATCH" ] ; then |
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| 51 | iojobpath=${TMPBATCH} |
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| 52 | else |
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| 53 | $ECHO "FATAL (${scriptName}): environment is ${ENVIRONMENT} not allowed" |
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| 54 | touch ${tmppublicpath}/getscafiles.finished |
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| 55 | exit 1 |
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| 56 | fi |
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| 57 | cd ${iojobpath} |
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| 58 | |
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| 59 | localpath="${sourceRadio}/${dateDAQ}${srclower}" |
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| 60 | $MKDIR -p ./${localpath} |
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| 61 | cd ./${localpath} |
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| 62 | |
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| 63 | |
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| 64 | #Path of the utility scripts |
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[510] | 65 | scriptpath="/afs/in2p3.fr/home/c/campagne/private/work/AmasNancay" |
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[507] | 66 | |
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| 67 | #look if the run exists |
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| 68 | tag=`${DATE} +%F` |
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| 69 | OUT1=${publicpath}/baodaqstatus-${tag}.txt |
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| 70 | if [ ! -e ${OUT1} -o ! -r ${OUT1} ]; then |
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| 71 | # $ECHO "We should bring the DAQ status more up to date, this take 1 or 2sec..." |
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| 72 | # $RM -f ${tmppublicpath}/statusdaq.finished |
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| 73 | # ${scriptpath}/statusdaq.sh > ${OUT1} |
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| 74 | # while [ ! -f "${tmppublicpath}/statusdaq.finished" ]; do |
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| 75 | # $ECHO "INFO (${scriptName}); waiting for ${tmppublicpath}/statusdaq.finished" |
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| 76 | # date +%T |
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| 77 | # sleep 30 |
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| 78 | # done |
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| 79 | # $RM ${tmppublicpath}/statusdaq.finished |
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| 80 | $ECHO "FATAL (${scriptName}): ${OUT1} is missing or not readable..." |
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| 81 | touch ${tmppublicpath}/getscafiles.finished |
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| 82 | exit 1 |
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| 83 | fi |
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| 84 | |
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| 85 | nfiles=`${GREP} "${sourceRadio}.*${dateDAQ}" ${OUT1} | ${AWK} '(NF==4){print $4}'` |
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| 86 | |
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| 87 | if [ "<${nfiles}>" = "<>" ]; then |
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| 88 | $ECHO "FATAL (${scriptName}): No run found for <${sourceRadio}> and date <${dateDAQ}>" |
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| 89 | touch ${tmppublicpath}/getscafiles.finished |
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| 90 | exit 1 |
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| 91 | fi |
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| 92 | |
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| 93 | |
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| 94 | #Look if the run should/can be prepared wrt SCA file transformation |
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| 95 | OUT2=./scaStatus.$$ |
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| 96 | $RM -f ${tmppublicpath}/scaextractor.finished |
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| 97 | ${scriptpath}/scaextractor.sh $sourceRadio > ${OUT2} 2>&1 |
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| 98 | while [ ! -f "${tmppublicpath}/scaextractor.finished" ]; do |
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| 99 | $ECHO "INFO (${scriptName}); waiting for ${tmppublicpath}/scaextractor.finished" |
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| 100 | date +%T |
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| 101 | sleep 30 |
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| 102 | done |
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| 103 | $RM ${tmppublicpath}/scaextractor.finished |
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| 104 | |
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| 105 | |
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| 106 | status=`$GREP "^FATAL.*${sourceRadio}.*${dateDAQ}" ${OUT2}` |
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| 107 | |
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| 108 | if [ "<$status>" != "<>" ]; then |
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| 109 | $ECHO "FATAL (${scriptName}): connot proceed further with $sourceRadio $dateDAQ" |
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| 110 | touch ${tmppublicpath}/getscafiles.finished |
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| 111 | exit 1 |
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| 112 | fi |
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| 113 | $RM $OUT2 |
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| 114 | |
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| 115 | #dowload sca files... |
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| 116 | dirIrod="/baoradio/data/AmasNancay/${sourceRadio}/${dateDAQ}${srclower}" |
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| 117 | dirLocal="." |
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| 118 | |
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| 119 | if [ ! -e $dirLocal ]; then |
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| 120 | $MKDIR -p $dirLocal |
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| 121 | fi |
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| 122 | |
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| 123 | cd $dirLocal |
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| 124 | |
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| 125 | OUT3=./scaFiles.$$ |
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| 126 | ils $dirIrod | $GREP -i "sca" > ${OUT3} |
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| 127 | tableau=( `$CAT ${OUT3}` ) |
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| 128 | IFS=' |
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| 129 | ' |
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| 130 | tableau=( $( $PRINTF "%s\n" "${tableau[@]}" | $AWK 'x[$0]++ == 0' ) ) |
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| 131 | IFS=$DefaultIFS |
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| 132 | $RM $OUT3 |
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| 133 | |
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| 134 | OUT4=./igetStatus.$$ |
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| 135 | for i in ${tableau[@]} |
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| 136 | do |
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| 137 | if [ ! -e $i ]; then |
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| 138 | iget -r -f -v -K ${dirIrod}/$i ${dirLocal} > ${OUT4} 2>&1 |
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| 139 | fi |
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| 140 | done |
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| 141 | |
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| 142 | igetStatus=`$GREP "^ERROR" ${OUT4}` |
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| 143 | if [ "<$igetStatus>" != "<>" ]; then |
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| 144 | $ECHO "FATAL (${scriptName}): error while iget:" |
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| 145 | $ECHO $igetStatus |
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| 146 | touch ${tmppublicpath}/getscafiles.finished |
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| 147 | exit 1 |
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| 148 | fi |
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| 149 | |
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| 150 | $RM -f $OUT4 |
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| 151 | |
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| 152 | touch ${tmppublicpath}/getscafiles.finished |
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| 153 | exit 0 |
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