1 | #!/bin/sh |
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2 | |
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3 | #hypothesis: ON = data1 phase, OFF data2 phase |
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4 | |
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5 | #Basic tuning of system fuction used. |
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6 | AWK=/bin/awk |
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7 | SED=/bin/sed |
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8 | GREP=/bin/grep |
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9 | WC=/usr/bin/wc |
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10 | RM=/bin/rm |
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11 | CAT=/bin/cat |
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12 | TOUCH=/bin/touch |
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13 | DATE=/bin/date |
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14 | ECHO=/bin/echo |
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15 | FIND=/usr/bin/find |
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16 | XARGS=/usr/bin/xargs |
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17 | SORT=/bin/sort |
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18 | MKDIR=/bin/mkdir |
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19 | LS=/bin/ls |
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20 | DefaultIFS=$' \t\n' |
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21 | IFS=$DefaultIFS |
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22 | |
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23 | scriptName="`basename $0`" |
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24 | $ECHO "Processing script ${scriptName} at `date`" |
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25 | |
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26 | if [ ! $# = 3 ]; then |
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27 | $ECHO "usage: ${scriptName} <scaXYZ.sum> <signalXYZDirectory> <type of phase:ON|OFF|CALIBON|CALIBOFF>" |
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28 | #JEC 29/9/11 avoid finished stuff |
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29 | # touch ${tmppublicpath}/select.finished |
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30 | exit 0 |
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31 | fi |
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32 | |
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33 | #Path to public backupable path |
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34 | publicpath="/afs/in2p3.fr/home/c/campagne/public" |
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35 | |
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36 | #temporary files to synchronize scripts |
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37 | tmppublicpath=${TMPPUBLICPATH} |
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38 | $LS -l ${tmppublicpath} > /dev/null |
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39 | |
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40 | |
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41 | #Path of the utility scripts |
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42 | scriptpath=${SCRIPTPATH} |
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43 | |
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44 | |
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45 | OUT1=./selectFits.$$ |
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46 | |
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47 | #inputs x-chexk sca file |
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48 | inScaFile=$1 |
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49 | if [ ! -e $inScaFile ]; then |
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50 | $ECHO "FATAL (${scriptName}): $inScaFile not found" |
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51 | #JEC 29/9/11 avoid finished stuff |
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52 | # touch ${tmppublicpath}/select.finished |
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53 | exit 1 |
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54 | fi |
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55 | |
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56 | #Where to look at |
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57 | inFiberDir=$2 |
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58 | |
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59 | inTypeOfPhase=$3 |
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60 | case "$inTypeOfPhase" in |
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61 | ON) |
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62 | $ECHO "INFO (${scriptName}): filter signal files for ON phases";; |
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63 | OFF) |
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64 | $ECHO "INFO (${scriptName}): filter signal files for OFF phases";; |
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65 | CALIBON) |
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66 | $ECHO "INFO (${scriptName}): filter signal files for CALIBRATION ON phases";; |
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67 | CALIBOFF) |
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68 | $ECHO "INFO (${scriptName}): filter signal files for CALIBRATION OFF phases";; |
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69 | GAIN) |
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70 | $ECHO "INFO (${scriptName}): filter signal files for GAIN = CALIB OFF phases";; |
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71 | *) |
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72 | $ECHO "FATAL (${scriptName}): use ON|OFF|CALIBON|CALIBOFF phase tags." |
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73 | #JEC 29/9/11 avoid finished stuff |
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74 | # touch ${tmppublicpath}/select.finished |
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75 | exit 1 |
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76 | ;; |
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77 | esac |
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78 | |
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79 | |
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80 | ################# |
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81 | #fill the arrays association header file with start/end date&time |
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82 | # arrays |
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83 | declare -a sigStart |
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84 | declare -a sigEnd |
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85 | declare -a sigFile |
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86 | |
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87 | for fullfile in $( $FIND $inFiberDir -name "header*" | $XARGS -i basename {} | $SORT -k1.7n) |
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88 | do |
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89 | filename=$(basename $fullfile) |
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90 | extension=${filename##*.} |
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91 | filename=${filename%.*} |
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92 | ffn=${inFiberDir}/${filename}.${extension} |
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93 | # echo "process $ffn" |
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94 | while read -n80 L |
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95 | do |
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96 | [ "${L::3}" = "END" ] && break |
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97 | echo $L |
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98 | done < $ffn > $OUT1 |
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99 | |
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100 | strStart=`$GREP TMSTART $OUT1 | $AWK '{split($0,a,"/"); split(a[1],b,"="); print b[2];}' | $SED 's/^[ \t]*//;s/[ \t]*$//' | $SED "s/^\([\"']\)\(.*\)\1\$/\2/g" | $AWK '{split($0,a,"T"); print a[1]" "a[2];}' ` |
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101 | |
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102 | strEnd=`$GREP TMEND $OUT1 | $AWK '{split($0,a,"/"); split(a[1],b,"="); print b[2];}' | $SED 's/^[ \t]*//;s/[ \t]*$//' | $SED "s/^\([\"']\)\(.*\)\1\$/\2/g" | $AWK '{split($0,a,"T"); print a[1]" "a[2];}' ` |
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103 | |
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104 | if [[ -n "$strStart" && -n "$strEnd" ]]; then |
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105 | timeStart=`${DATE} +%s -d "${strStart}"` |
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106 | timeEnd=`${DATE} +%s -d "${strEnd}"` |
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107 | # echo "$fullfile start $strStart <$timeStart>, end $strEnd <$timeEnd>" |
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108 | sigStart[${#sigStart[*]}]=$timeStart |
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109 | sigEnd[${#sigEnd[*]}]=$timeEnd |
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110 | sigFile[${#sigFile[*]}]=$filename |
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111 | else |
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112 | $ECHO "WARNING (${scriptName}): $ffn PATHOLOGIQUE" |
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113 | fi |
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114 | done |
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115 | |
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116 | ############ |
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117 | #scan all the cycles |
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118 | # calib1start=$2; calib1end=$3; |
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119 | # data1start=$4; data1end=$5; |
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120 | # calib2start=$6; calib2end=$7; |
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121 | # data2start=$8; data2end=$9; |
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122 | #to pass to awk: use a "," as field separator |
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123 | awk_sigStart=$( printf "%s," "${sigStart[@]}" ) |
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124 | awk_sigEnd=$( printf "%s," "${sigEnd[@]}" ) |
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125 | awk_sigFile=$( printf "%s," "${sigFile[@]}" ) |
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126 | |
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127 | #attention a la derniere "," pour le calcul de nfile |
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128 | OUT1=./tmpselect1.$$ |
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129 | #selection d'une seul cycle pour debug |
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130 | $AWK -v datesys=$DATE -v type=$inTypeOfPhase -v str_sigStart="$awk_sigStart" -v str_sigEnd="$awk_sigEnd" -v str_sigFile="$awk_sigFile" ' |
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131 | BEGIN { |
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132 | FS=","; |
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133 | split(str_sigStart,a_sigStart,","); |
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134 | split(str_sigEnd,a_sigEnd,","); |
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135 | nfile=split(str_sigFile,a_sigFile,","); |
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136 | delete a_sigFile[nfile]; |
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137 | delete a_sigStart[nfile]; |
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138 | delete a_sigEnd[nfile]; |
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139 | nfile--; |
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140 | |
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141 | } |
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142 | |
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143 | { |
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144 | cycle=$1; |
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145 | |
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146 | if ( type == "ON" ) { |
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147 | phaseStart=$4; phaseEnd=$5; |
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148 | cmd=sprintf("%s +%%s -d \"%s\" ",datesys,phaseStart); |
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149 | (cmd | getline phstart); |
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150 | close(cmd); |
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151 | cmd=sprintf("%s +%%s -d \"%s\" ",datesys,phaseEnd); |
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152 | (cmd | getline phend); |
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153 | close(cmd); |
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154 | # print "Phase: ",type," cycle: ",cycle,": <",phstart,">:<",phend,">"; |
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155 | deltaStartSafety=4; |
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156 | deltaEndSafety=-4; |
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157 | } |
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158 | else if ( type == "OFF" ) { |
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159 | phaseStart=$8; phaseEnd=$9; |
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160 | cmd=sprintf("%s +%%s -d \"%s\" ",datesys,phaseStart); |
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161 | (cmd | getline phstart); |
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162 | close(cmd); |
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163 | cmd=sprintf("%s +%%s -d \"%s\" ",datesys,phaseEnd); |
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164 | (cmd | getline phend); |
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165 | close(cmd); |
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166 | # print "Phase: ",type," cycle: ",cycle,": <",phstart,">:<",phend,">"; |
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167 | deltaStartSafety=4; |
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168 | deltaEndSafety=-4; |
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169 | } |
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170 | else if ( type == "CALIBON" ) { |
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171 | phaseStart=$2; phaseEnd=$3; |
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172 | print "Phase: ",type," cycle: ",cycle,": <",phaseStart,">:<",phaseEnd,">"; |
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173 | cmd=sprintf("%s +%%s -d \"%s\" ",datesys,phaseStart); |
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174 | (cmd | getline phstart); |
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175 | close(cmd); |
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176 | cmd=sprintf("%s +%%s -d \"%s\" ",datesys,phaseEnd); |
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177 | (cmd | getline phend); |
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178 | close(cmd); |
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179 | # print "Phase: ",type," cycle: ",cycle,": <",phstart,">:<",phend,">"; |
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180 | deltaStartSafety=-6; |
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181 | deltaEndSafety=6; |
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182 | } |
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183 | else if ( (type == "CALIBOFF") || (type == "GAIN") ) { |
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184 | phaseStart=$6; phaseEnd=$7; |
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185 | cmd=sprintf("%s +%%s -d \"%s\" ",datesys,phaseStart); |
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186 | (cmd | getline phstart); |
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187 | close(cmd); |
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188 | cmd=sprintf("%s +%%s -d \"%s\" ",datesys,phaseEnd); |
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189 | (cmd | getline phend); |
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190 | close(cmd); |
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191 | # print "Phase: ",type," cycle: ",cycle,": <",phstart,">:<",phend,">"; |
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192 | deltaStartSafety=-6; |
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193 | deltaEndSafety=6; |
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194 | } |
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195 | else { |
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196 | print "FATAL: ",type," NOT YET SUPPORTED"; exit 1; |
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197 | } |
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198 | |
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199 | for (i=1; i<=nfile; i++) { |
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200 | diffstart = a_sigStart[i] - phstart; |
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201 | diffend = a_sigEnd[i] - phend; |
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202 | # print "file ",i," start ",a_sigStart[i],": diff <" diffstart ">:<" diffend ">"; |
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203 | if ( diffstart >= deltaStartSafety && diffend <= deltaEndSafety ) |
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204 | print "cycle ",cycle," file ",i-1," accepted ",a_sigFile[i]; |
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205 | } |
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206 | |
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207 | |
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208 | }' $inScaFile > ${OUT1} |
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209 | |
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210 | OUT2=./tmpselect2.$$ |
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211 | $AWK ' |
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212 | BEGIN { max=0; min=999999; }; |
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213 | |
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214 | ($1=="cycle") { table[$2] = table[$2]","$4; if($2>max){max=$2}; if($2<min){min=$2} }; |
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215 | |
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216 | END { for (j=min;j<=max;j++) {print j,table[j];} } |
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217 | ' ${OUT1} > ${OUT2} |
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218 | |
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219 | $AWK ' |
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220 | BEGIN { FS=","} |
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221 | { |
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222 | print "#"$1,$2","$NF",1"; |
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223 | } |
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224 | ' ${OUT2} |
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225 | |
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226 | $RM $OUT1 |
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227 | $RM $OUT2 |
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228 | |
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229 | #JEC 29/9/11 avoid finished stuff |
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230 | #touch ${tmppublicpath}/select.finished |
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231 | exit 0 |
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