Changeset 576 for BAORadio/AmasNancay
- Timestamp:
- Oct 14, 2011, 2:49:14 PM (13 years ago)
- Location:
- BAORadio/AmasNancay/trunk
- Files:
-
- 12 edited
Legend:
- Unmodified
- Added
- Removed
-
BAORadio/AmasNancay/trunk/anacalibmaker.sh
r575 r576 296 296 #WARNING: the EOF must start at 1st column overwise the rest of the script is part of the file cat... 297 297 else 298 ${scriptpath}/Objs/analyse -act calib -inPath ${iojobpath} -source ${sourceRadio} -date ${dateDAQ} -sca ${scaFile} -specdir calibcycle -numcycle ${firstCycle},${lastCycle} -calibopt mean -debug lev1 -freqBAOCalib ${freqBAOCalib} -bwBAOCalib ${bwBAOCalib} >& ${logFile}298 ${scriptpath}/Objs/analyse -act calib -inPath ${iojobpath} -source ${sourceRadio} -date ${dateDAQ} -sca ${scaFile} -specdir calibcycle -numcycle ${firstCycle},${lastCycle} -calibopt mean -debug 1 -freqBAOCalib ${freqBAOCalib} -bwBAOCalib ${bwBAOCalib} >& ${logFile} 299 299 fi 300 300 # -
BAORadio/AmasNancay/trunk/proc_script.sh
r575 r576 500 500 501 501 ##26/9/11 JEC use option -h to trig manualy the job on the queue... 502 qsub -h -l u_sps_baoradio,u_irods, T=${cpu},M=${virtualmem}MB,scratch=${scratchSize}MB,platform=LINUX -eo -o ${tmppublicpath}/${jobLogName} -N ${jobBatchName} ${jobScriptName}502 qsub -h -l u_sps_baoradio,u_irods,u_irods_baoradio,T=${cpu},M=${virtualmem}MB,scratch=${scratchSize}MB,platform=LINUX -eo -o ${tmppublicpath}/${jobLogName} -N ${jobBatchName} ${jobScriptName} 503 503 504 504 # while [ ! -f "${tmppublicpath}/${jobBatchName}.finished" ]; do -
BAORadio/AmasNancay/trunk/scaextractor.sh
r575 r576 23 23 #which source to analyse 24 24 sourceRadio=$1 25 26 #force recomputation force=Yes 27 force=$2 25 28 26 29 #Path to public backupable path … … 66 69 $ECHO "FATAL (${scriptName}): ${OUT1} has a problem" 67 70 exit 1 68 # $ECHO "We should bring the DAQ status more up to date, this take 1 or 2sec..."69 # $RM -f ${tmppublicpath}/statusdaq.finished70 # ${scriptpath}/statusdaq.sh > ${OUT1}71 # while [ ! -f "${tmppublicpath}/statusdaq.finished" ]; do72 # $ECHO "INFO (${scriptName}); waiting for ${tmppublicpath}/statusdaq.finished"73 # date +%T74 # sleep 3075 # done76 # $RM ${tmppublicpath}/statusdaq.finished77 # $ECHO "FATAL (${scriptName}): ${OUT1} is missing or not readable..."78 #JEC 29/9/11 avoid finished stuff79 # touch ${tmppublicpath}/scaextractor.finished80 # exit 181 71 fi 82 72 … … 104 94 emptyfile=`$GREP -i "sca.*\.sum\.trans" ${OUT2} | $AWK '{print $4}'` 105 95 # echo "scrutinize directory <$i>: [$nblines] [$scatrans]" 106 if [ "<${scatrans}>" = "<>" -o "<${emptyfile}>" = "<0>" ]; then96 if [ "<${scatrans}>" = "<>" -o "<${emptyfile}>" = "<0>" -o "<${force}>" = "<Yes>" ]; then 107 97 $ECHO "$i may be non prepared for analysis..." 108 98 scafile=`$GREP -i "sca[0-9][0-9]*\.[0-9][0-9]*" ${OUT2} | $AWK '{print $NF}'` -
BAORadio/AmasNancay/trunk/submit2bqs-anacalibmaker.sh
r570 r576 41 41 jobLogName="${jobBatchName}.log.$$" 42 42 43 qsub -l u_sps_baoradio,u_irods, T=120000,M=1000MB,scratch=1000MB,platform=LINUX -eo -o $jobLogName -N $jobBatchName -mb -me -mu ${LOGNAME}@lal.in2p3.fr <<EOF43 qsub -l u_sps_baoradio,u_irods,u_irods_baoradio,T=120000,M=1000MB,scratch=1000MB,platform=LINUX -eo -o $jobLogName -N $jobBatchName -mb -me -mu ${LOGNAME}@lal.in2p3.fr <<EOF 44 44 /afs/in2p3.fr/home/c/campagne/private/work/AmasNancay/anacalibmaker.sh -src ${sourceRadio} ${dateSelected} ${freqBAOCalib} ${bwBAOCalib} ${simulationMode} 45 45 EOF -
BAORadio/AmasNancay/trunk/submit2bqs-anagainmaker.sh
r570 r576 22 22 jobLogName="${jobBatchName}.log.$$" 23 23 24 qsub -l u_sps_baoradio,u_irods, T=120000,M=1000MB,scratch=500MB,platform=LINUX -eo -o $jobLogName -N $jobBatchName -mb -me -mu ${LOGNAME}@lal.in2p3.fr <<EOF24 qsub -l u_sps_baoradio,u_irods,u_irods_baoradio,T=120000,M=1000MB,scratch=500MB,platform=LINUX -eo -o $jobLogName -N $jobBatchName -mb -me -mu ${LOGNAME}@lal.in2p3.fr <<EOF 25 25 /afs/in2p3.fr/home/c/campagne/private/work/AmasNancay/gainmaker.sh -src ${sourceRadio} ${simulationMode} 26 26 EOF -
BAORadio/AmasNancay/trunk/submit2bqs-anarawonoffmaker.sh
r569 r576 38 38 jobLogName="${jobBatchName}.log.$$" 39 39 40 qsub -l u_sps_baoradio,u_irods, T=120000,M=1000MB,scratch=1000MB,platform=LINUX -eo -o $jobLogName -N $jobBatchName -mb -me -mu ${LOGNAME}@lal.in2p3.fr <<EOF40 qsub -l u_sps_baoradio,u_irods,u_irods_baoradio,T=120000,M=1000MB,scratch=1000MB,platform=LINUX -eo -o $jobLogName -N $jobBatchName -mb -me -mu ${LOGNAME}@lal.in2p3.fr <<EOF 41 41 /afs/in2p3.fr/home/c/campagne/private/work/AmasNancay/anarawonoffmaker.sh -src ${sourceRadio} ${dateSelected} ${simulationMode} 42 42 EOF -
BAORadio/AmasNancay/trunk/submit2bqs-calibmaker.sh
r569 r576 39 39 jobLogName="${jobBatchName}.log.$$" 40 40 41 qsub -l u_sps_baoradio,u_irods, T=120000,M=1000MB,scratch=1000MB,platform=LINUX -eo -o $jobLogName -N $jobBatchName -mb -me -mu ${LOGNAME}@lal.in2p3.fr <<EOF41 qsub -l u_sps_baoradio,u_irods,u_irods_baoradio,T=120000,M=1000MB,scratch=1000MB,platform=LINUX -eo -o $jobLogName -N $jobBatchName -mb -me -mu ${LOGNAME}@lal.in2p3.fr <<EOF 42 42 /afs/in2p3.fr/home/c/campagne/private/work/AmasNancay/calibmaker.sh -src ${sourceRadio} ${freqBAOCalib} ${bwBAOCalib} ${simulationMode} 43 43 EOF -
BAORadio/AmasNancay/trunk/submit2bqs-gainmaker.sh
r570 r576 29 29 jobLogName="${jobBatchName}.log.$$" 30 30 31 qsub -l u_sps_baoradio,u_irods, T=120000,M=1000MB,scratch=500MB,platform=LINUX -eo -o $jobLogName -N $jobBatchName -mb -me -mu ${LOGNAME}@lal.in2p3.fr <<EOF31 qsub -l u_sps_baoradio,u_irods,u_irods_baoradio,T=120000,M=1000MB,scratch=500MB,platform=LINUX -eo -o $jobLogName -N $jobBatchName -mb -me -mu ${LOGNAME}@lal.in2p3.fr <<EOF 32 32 /afs/in2p3.fr/home/c/campagne/private/work/AmasNancay/anagainmaker.sh -src ${sourceRadio} ${dateSelected} ${simulationMode} 33 33 EOF -
BAORadio/AmasNancay/trunk/submit2bqs-hdrfitsextractor.sh
r569 r576 19 19 jobLogName="${jobBatchName}.log.$$" 20 20 21 qsub -l u_sps_baoradio,u_irods, T=100000,M=256MB,scratch=700MB,platform=LINUX -eo -o $jobLogName -N $jobBatchName -mb -me -mu ${LOGNAME}@lal.in2p3.fr <<EOF21 qsub -l u_sps_baoradio,u_irods,u_irods_baoradio,T=100000,M=256MB,scratch=700MB,platform=LINUX -eo -o $jobLogName -N $jobBatchName -mb -me -mu ${LOGNAME}@lal.in2p3.fr <<EOF 22 22 /afs/in2p3.fr/home/c/campagne/private/work/AmasNancay/hdrfitsextractor.sh $sourceRadio 23 23 EOF -
BAORadio/AmasNancay/trunk/submit2bqs-onoffmaker.sh
r569 r576 40 40 jobLogName="${jobBatchName}.log.$$" 41 41 42 qsub -l u_sps_baoradio,u_irods, T=120000,M=1000MB,scratch=1000MB,platform=LINUX -eo -o $jobLogName -N $jobBatchName -mb -me -mu ${LOGNAME}@lal.in2p3.fr <<EOF42 qsub -l u_sps_baoradio,u_irods,u_irods_baoradio,T=120000,M=1000MB,scratch=1000MB,platform=LINUX -eo -o $jobLogName -N $jobBatchName -mb -me -mu ${LOGNAME}@lal.in2p3.fr <<EOF 43 43 /afs/in2p3.fr/home/c/campagne/private/work/AmasNancay/onoffmaker.sh -src ${sourceRadio} ${dateSelected} ${freqBAOCalib} ${simulationMode} 44 44 EOF -
BAORadio/AmasNancay/trunk/submit2bqs-procspecmfib.sh
r575 r576 122 122 cpu=`expr ${nFiles} \* 60 \* 50` 123 123 124 qsub -l u_sps_baoradio,u_irods, T=${cpu},M=1000MB,scratch=${scratchSize}MB,platform=LINUX -eo -o $jobLogName -N $jobBatchName -mb -me -mu ${LOGNAME}@lal.in2p3.fr <<EOF124 qsub -l u_sps_baoradio,u_irods,u_irods_baoradio,T=${cpu},M=1000MB,scratch=${scratchSize}MB,platform=LINUX -eo -o $jobLogName -N $jobBatchName -mb -me -mu ${LOGNAME}@lal.in2p3.fr <<EOF 125 125 /afs/in2p3.fr/home/c/campagne/private/work/AmasNancay/proc_specmfib.sh ${action} -src ${sourceRadio} ${dateSelected} ${typeofproc} ${firstCycle} ${lastCycle} ${simulationMode} 126 126 EOF -
BAORadio/AmasNancay/trunk/submit2bqs-scaextractor.sh
r575 r576 19 19 #Process cmd line args: the -src option is mandatory (source name as Abell85) 20 20 sourceRadio= 21 force= 21 22 while [ $# -gt 0 ] 22 23 do 23 24 case "$1" in 24 25 -src) sourceRadio=$2; shift;; 26 -force) force="Yes";; 25 27 -h) 26 28 echo >&2 \ … … 52 54 $ECHO "FATAL (${scriptName}): ${OUT1} has a problem" 53 55 exit 1 54 # $ECHO "We should bring the DAQ status more up to date, this take 1 or 2sec..."55 # $RM -f ${tmppublicpath}/statusdaq.finished56 # ${scriptpath}/statusdaq.sh > ${OUT1}57 # while [ ! -f "${tmppublicpath}/statusdaq.finished" ]; do58 # sleep 3059 # done60 # $RM ${tmppublicpath}/statusdaq.finished61 #protect against remove/rewriting62 # $CHMOD -v 444 ${OUT1}63 56 fi 64 57 … … 66 59 jobLogName="${jobBatchName}.log.$$" 67 60 68 qsub -l u_sps_baoradio,u_irods, T=100000,M=256MB,scratch=700MB,platform=LINUX -eo -o $jobLogName -N $jobBatchName -mb -me -mu ${LOGNAME}@lal.in2p3.fr <<EOF69 /afs/in2p3.fr/home/c/campagne/private/work/AmasNancay/scaextractor.sh $ sourceRadio61 qsub -l u_sps_baoradio,u_irods,u_irods_baoradio,T=100000,M=256MB,scratch=700MB,platform=LINUX -eo -o $jobLogName -N $jobBatchName -mb -me -mu ${LOGNAME}@lal.in2p3.fr <<EOF 62 /afs/in2p3.fr/home/c/campagne/private/work/AmasNancay/scaextractor.sh ${sourceRadio} ${force} 70 63 EOF
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