Changeset 629

Timestamp:

Jan 13, 2012, 11:44:05 AM (12 years ago)

Author:

torrento

Message:

Added imeta tagging

File:

• BAORadio/AmasNancay/trunk/hdrfitsextractor.sh (modified) (4 diffs)

BAORadio/AmasNancay/trunk/hdrfitsextractor.sh

@@ -13 +13 @@
 RM=/bin/rm
 defaultIFS=$IFS
+SED=/bin/sed
 
 #set Irods environment    
@@ -59 +60 @@
 if [ ! "<${sourceRadio}>" = "<>" ]; then
     $ECHO "You have selected sourceRadio = $sourceRadio"
-    tableau=( `$GREP -i ${sourceRadio} ${OUT1} | $AWK '( NF==4 ) { print $2 }' ` )
+#    tableau=( `$GREP -i ${sourceRadio} ${OUT1} | $AWK '( NF==4 ) { print $2 }' ` )
+    tableau=( `imeta qu -C status "=" hdrNOTDone | $AWK "/$sourceRadio/" | $AWK '{print $2}' ` )
 else
-    tableau=( `$CAT ${OUT1} | $AWK '( NF==4 ) { print $2 }'`  )
+#    tableau=( `$CAT ${OUT1} | $AWK '( NF==4 ) { print $2 }'`  )
+    tableau=( `imeta qu -C status "=" hdrNOTDone | $AWK '{print $2}' | $SED '/^$/d' ` )
 fi
 IFS='
@@ -82 +85 @@
   for fibdir in Fiber1 Fiber2; do
       $ECHO "DEBUG (${scriptName}): Fiber $fibdir"
-#NB: care should be taken to the fact that ILS returns all the instance of the file (HPSS, disk...)
-#    so one should use a trick to count unique instance
-      listOfsig=( `ils ${i}/${fibdir} | $GREP -i "signal" | $XARGS -i basename {} | $SORT -k1.7n` )
-      IFS='
+      status=`imeta ls -C ${i}/${fibdir} status | $AWK '/value/{print $2}'`
+      $ECHO ${status}
+##NB: care should be taken to the fact that ILS returns all the instance of the file (HPSS, disk...)
+##    so one should use a trick to count unique instance
+#      listOfsig=( `ils ${i}/${fibdir} | $GREP -i "signal" | $XARGS -i basename {} | $SORT -k1.7n` )
+#      IFS='
+#'
+#      listOfsig=( $( $PRINTF "%s\n" "${listOfsig[@]}" | $AWK 'x[$0]++ == 0' ) )
+#      nblinesSIG=${#listOfsig[@]}
+#      listOfhdr=( `ils ${i}/${fibdir} | $GREP -i "header" | $XARGS -i basename {} | $SORT -k1.7n` )
+#      IFS='
+#'
+#      listOfhdr=( $( $PRINTF "%s\n" "${listOfhdr[@]}" | $AWK 'x[$0]++ == 0' ) )
+#      nblinesHDR=${#listOfhdr[@]}
+#      $ECHO "(DEBUG) (${scriptName}:  test if $nblinesHDR != $nblinesSIG "
+#      if [ $nblinesHDR != $nblinesSIG ]; then
+       if [ "<$status>" != "<hdrDone>" ]; then
+##do the header extraction
+##build signal files list 
+##loop on signal files
+          listOfsig=( `ils ${i}/${fibdir} | $GREP -i "signal" | $XARGS -i basename {} | $SORT -k1.7n` )
+          IFS='
 '
-      listOfsig=( $( $PRINTF "%s\n" "${listOfsig[@]}" | $AWK 'x[$0]++ == 0' ) )
-      nblinesSIG=${#listOfsig[@]}
-      listOfhdr=( `ils ${i}/${fibdir} | $GREP -i "header" | $XARGS -i basename {} | $SORT -k1.7n` )
-      IFS='
-'
-      listOfhdr=( $( $PRINTF "%s\n" "${listOfhdr[@]}" | $AWK 'x[$0]++ == 0' ) )
-      nblinesHDR=${#listOfhdr[@]}
-      $ECHO "(DEBUG) (${scriptName}:  test if $nblinesHDR != $nblinesSIG "
-      if [ $nblinesHDR != $nblinesSIG ]; then
-#do the header extraction
-#build signal files list 
-#loop on signal files
+          listOfsig=( $( $PRINTF "%s\n" "${listOfsig[@]}" | $AWK 'x[$0]++ == 0' ) )
           $ECHO "(DEBUG) (${scriptName}):  ${listOfsig[@]}"
 
@@ -146 +156 @@
             nloop4dbg=$(expr $nloop4dbg + 1)
           done
+          imeta mod -C ${i}/${fibdir} status hdrNOTDone v:hdrDone
       else
           $ECHO "INFO (${scriptName}): nothing to do for ${i}/${fibdir}"