#source should be in minuscule letters
# gain = 1 if on,off have been divided by gain

set source $1
set ncycles $2
set gain $3

#c++compile meanSigSum
#c++link    meanSigSum.so meanSigSum

set defatt "font=helvetica,bold,20 fixedfonsize"
set axedefatt  "font=helvetica,bold,30 fixedfonsize grid"

set defatt ""
set axedefatt  "grid"

graphicatt ""
setaxesatt "$axedefatt"

set path "/sps/baoradio/AmasNancay/AST"

if ( $gain == "0" ) then
  openppf ${path}/rawOnOffDiffNoGain_${source}-${ncycles}Cycles.ppf
  echo "Opening file  ${path}/rawOnOffDiffNoGain_${source}-${ncycles}Cycles.ppf"
else
  openppf ${path}/rawOnOffDiff_${source}-${ncycles}Cycles.ppf
  echo "Opening file  ${path}/rawOnOffDiff_${source}-${ncycles}Cycles.ppf"
endif

# Abell 85, 500 cycles
if ( ${source} == "abell85" ) then
  set f1420low 1420.2
  set f1420high 1420.6
  set packVal "1 10 25 50 100"
endif

# Abell 1205, 600, 750 cycles
if ( ${source} == "abell1205" ) then
  set f1420low 1420.1
  set f1420high 1420.6
  if ( $ncycles == 600 ) then
    set packVal "1 10 25 50 100 120"
  else
    set packVal "1 10 15 50 75 125 150"
  endif
endif

# Abell 2440, 210 cycles
if ( ${source} == "abell2440" ) then
  set f1420low 1420.4
  set f1420high 1420.7
  set packVal "1 10 25 42"
endif

# All clusters, 1549 cycles
if ( ${source} == "abell85-abell2440-abell1205" ) then
  set f1420low 1420.1
  set f1420high 1420.7
  set packVal "1 10 25 50 100 260"
endif


echo "f1420low=${f1420low}, f1420high=${f1420high}"
echo "Packing values="${packVal}

nbins1420 = floor((${f1420high}-${f1420low})/250*8192)
#echo $nbins1420

clearscript evolAt1420Freq
clearscript evolAt1420SideFreq
clearscript evolAt1410a1415OffOn
clearscript sigmaRaw1420Side
clearscript sigmaRaw1410a1415
clearscript sigmaRawBand
clearscript IntAt1420
clearscript diffOnOff
###########################################
defscript evolAt1420Freq


#Follow up of the intensity arround the [1420,1421]MHz frequency in different calibration conditions
# NO calibration

graphicatt "xylimits=0,500,-0.01,0.01"

newwin 1 2
n/pl onoffevol.onoffRaw01420%cycle ! ! "blue cpts notit nsta"
settitle "Raw (ON-OFF)/OFF  ${source} Ch 0 (blue) Ch 1 (red) ${ncycles}cycles " ' ' $defatt
n/pl onoffevol.onoffRaw11420%cycle ! ! "red cpts notit nsta"
setaxelabels "cycle" "I[${f1420low},${f1420high}]MHz Raw (a.u)" $axedefatt


newh1d hSigmaRaw0 -0.01 0.01 25
newh1d hSigmaRaw1 -0.01 0.01 25

graphicatt ""

newwin 1 1
n/proj hSigmaRaw0 onoffevol.onoffRaw01420 ! ! ! "blue cpts notit"
n/proj hSigmaRaw1 onoffevol.onoffRaw11420 ! ! ! "same red cpts notit"
settitle "Raw (ON-OFF)/OFF  ${source} Ch 0 (blue) Ch 1 (red) ${ncycles}cycles " ' ' $defatt
setaxelabels "(a.u)" "I[${f1420low},${f1420high}]MHz Raw" $axedefatt

endscript
##################################################
defscript sigmaRaw1420Side

c++compile rebining
c++link rebining.so dorebin

#col 3 = onoffRaw01420side   Ch 0
#col 4 = onoffRaw11420side   Ch 1

ntcol2var onoffevol 3 linCh0All
line2vec vecCh0All $linCh0All

ntcol2var onoffevol 4 linCh1All
line2vec vecCh1All $linCh1All

#packing values only valid for 500 cycles...
set packVal "1 10 25 50 100"
set sigmaCh0 ""
set errsigCh0 ""
set sigmaCh1 ""
set errsigCh1 ""

foreach ipack ( $packVal )

#Packing per ipack
  del invec 
  del outvec
  cp vecCh0All invec
  call dorebin $ipack
  mean0 = ${outvec.sum}/${outvec.size}
  sigma0 = sqrt(${outvec.sumsq}/${outvec.size}-${mean0}*${mean0})
  errsig0 = ${sigma0}/sqrt(2*${outvec.size})	
  set sigmaCh0 "${sigmaCh0} ${sigma0}"	
  set errsigCh0 "${errsigCh0} ${errsig0}"	
#
  del invec
  del outvec
  cp vecCh1All invec
  call dorebin $ipack
  mean1 = ${outvec.sum}/${outvec.size}
  sigma1 = sqrt(${outvec.sumsq}/${outvec.size}-${mean1}*${mean1})
  errsig1 = ${sigma1}/sqrt(2*${outvec.size})	
  set sigmaCh1 "${sigmaCh1} ${sigma1}"	
  set errsigCh1 "${errsigCh1} ${errsig1}"
end


newnt nt0 x y ey
newnt nt1 x y ey

set x0 ( $packVal )
set y0 ( $sigmaCh0 )
set ey0 ( $errsigCh0 )

set x1 ( $packVal )
set y1 ( $sigmaCh1 )
set ey1 ( $errsigCh1 )
	
for i 0:$#x0
 line2nt nt0 $x0[i] $y0[i] $ey0[i]
 line2nt nt1 $x1[i] $y1[i] $ey1[i]
end


newwin 1 1
plot2de nt0 x y 0 ey 1 "blue marker=fcircle,9 notit nsta"     
plot2de nt1 x y 0 ey 1 "same red  marker=fcircle,9 notit nsta"
n = ${#x0}-1
func $y0[0]/sqrt(x) $x0[0] $x0[n]  100 "same"
settitle "Sigma [1418,1419]U[1422,1423]MHz ${source} Ch 0 (blue) Ch 1 (red)" ' ' $defatt
setaxelabels "num of cycles" "Sigma (a.u)" $axedefatt

endscript
##################################################
defscript sigmaRaw1410a1415

c++compile rebining
c++link rebining.so dorebin


#col 5 = onoffRaw0f14101415   Ch 0
#col 6 = onoffRaw1f14101415  Ch 1

ntcol2var onoffevol 5 linCh0All
line2vec vecCh0All $linCh0All

ntcol2var onoffevol 6 linCh1All
line2vec vecCh1All $linCh1All

#packing values only valid for 500 cycles...
set packVal "1 10 25 50 100"
set sigmaCh0 ""
set errsigCh0 ""
set sigmaCh1 ""
set errsigCh1 ""


foreach ipack ( $packVal )

#Packing per ipack
  del invec 
  del outvec
  cp vecCh0All invec
  call dorebin $ipack
  mean0 = ${outvec.sum}/${outvec.size}
  sigma0 = sqrt(${outvec.sumsq}/${outvec.size}-${mean0}*${mean0})
  errsig0 = ${sigma0}/sqrt(2*${outvec.size})	
  set sigmaCh0 "${sigmaCh0} ${sigma0}"	
  set errsigCh0 "${errsigCh0} ${errsig0}"	
#
  del invec
  del outvec
  cp vecCh1All invec
  call dorebin $ipack
  mean1 = ${outvec.sum}/${outvec.size}
  sigma1 = sqrt(${outvec.sumsq}/${outvec.size}-${mean1}*${mean1})
  errsig1 = ${sigma1}/sqrt(2*${outvec.size})	
  set sigmaCh1 "${sigmaCh1} ${sigma1}"	
  set errsigCh1 "${errsigCh1} ${errsig1}"
end


newnt nt0 x y ey
newnt nt1 x y ey

set x0 ( $packVal )
set y0 ( $sigmaCh0 )
set ey0 ( $errsigCh0 )

set x1 ( $packVal )
set y1 ( $sigmaCh1 )
set ey1 ( $errsigCh1 )
	
for i 0:$#x0
 line2nt nt0 $x0[i] $y0[i] $ey0[i]
 line2nt nt1 $x1[i] $y1[i] $ey1[i]
end


newwin 1 1
plot2de nt0 x y 0 ey 1 "blue marker=fcircle,9 notit nsta"     
plot2de nt1 x y 0 ey 1 "same red  marker=fcircle,9 notit nsta"
n = ${#x0}-1
func $y0[0]/sqrt(x) $x0[0] $x0[n]  100 "same"
settitle "Sigma [1410,1415]MHz ${source} Ch 0 (blue) Ch 1 (red)" ' ' $defatt
setaxelabels "num of cycles" "Sigma (a.u)" $axedefatt

endscript
###########################################
# Old function sigmaRaw1400a1420
defscript sigmaRawBand
# flow,fhigh = frequency limits for integration band
# offFilt = 1 we divide on-off by filtered Off

set flow $1
set fhigh $2
set offFilt $3
set nclusters $4
graphicatt ""

if ( $nclusters == 1 ) then
## Individual clusters (update of mergeAnaFiles.cc on 09/01/2012)
## mergeAnaFiles.cc -> meanRawDiffOnOffCycles -> rawOnOffDiff_[source]-[n]Cycles.ppf
## Frequency bands [1405,1415], [1405,1410], [1410,1415] MHz
## [1405,1415]: col 11,12 = onoffRaw[0,1]f14051415 Ch[0,1] (ON-OFF)/OFF_filt
## [1405,1410]: col 13,14 = onoffRaw[0,1]f14051410 Ch[0,1]
## [1410,1415]: col  5, 6 = onoffRaw[0,1]f14101415 Ch[0,1]
## [1405,1415]: col 15,16 = diffonoffRaw[0,1]f14051415 Ch[0,1] (ON-OFF)
## [1405,1410]: col 17,18 = diffonoffRaw[0,1]f14051410 Ch[0,1]
## [1410,1415]: col 19,20 = diffonoffRaw[0,1]f14101415 Ch[0,1]
  if ( $flow == 1405 ) then
    if ( $fhigh == 1415 ) then
      if ( $offFilt == 1 ) then
        set col0 11
        set col1 12
      else
        set col0 15
        set col1 16
      endif
    endif
    if ( $fhigh == 1410 ) then
      if ( $offFilt == 1 ) then
        set col0 13
        set col1 14
      else
        set col0 17
        set col1 18
      endif
    endif
  endif
  if ( $flow == 1410 ) then
    if ( $fhigh == 1415 ) then
      if ( $offFilt == 1 ) then
        set col0 5
        set col1 6
      else
        set col0 19
        set col1 20
      endif
    endif
  endif

  ntcol2var onoffevol $col0 linCh0All
  line2vec vecCh0All $linCh0All
  ntcol2var onoffevol $col1 linCh1All
  line2vec vecCh1All $linCh1All
else
  ## Execute if analysing All Clusters abell85-abell2440-abell1205
  ## mergeAnaFiles.cc -> MeanRawDiffOnOffAllClusters -> rawOnOffDiff_[sources]-[n]Cycles.ppf
  ## Shifts the distribution of each cluster to mean~0, to avoid 
  ## offset problems when regrouping values
  ##   col 5,6  = onoffRaw0f14101415   Ch 0,1 [1410,1415]MHz
  ##   col 7,8  = onoffRaw1f141014125  Ch 0,1 [1410,1412.5]MHz
  ##   col 9,10 = onoffRaw1f14101411   Ch 0,1 [1410,1411]MHz

  if ( $flow == 1410 ) then
    if ( $fhigh == 1415 ) then
      set col0 5
      set col1 6
    endif
    if ( $fhigh == 14125 ) then
      set col0 7
      set col1 8
    endif
    if ( $fhigh == 1411 ) then
      set col0 9
      set col1 10
    endif
  endif
  echo Analysing ntuple columns $col0, $col1

  ntcol2var onoffevol $col0 linCh0All
  line2vec invecCh0All $linCh0All
  ntcol2var onoffevol $col1 linCh1All
  line2vec invecCh1All $linCh1All

  del v85 v2440 v1205
  exptovec v85 onoffevol cycletot-1 srcID==85
  set v85_first ${v85.min}
  set v85_last ${v85.max}
  exptovec v2440 onoffevol cycletot-1 srcID==2440
  set v2440_first ${v2440.min}
  set v2440_last ${v2440.max}
  exptovec v1205 onoffevol cycletot-1 srcID==1205
  set v1205_first ${v1205.min}
  set v1205_last ${v1205.max}

  del vecCh085 vecCh02440 vecCh01205 vecCh185 vecCh12440 vecCh11205 vecCh0All vecCh1All
  h/copy invecCh0All vecCh085 ${v85_first}:${v85_last}
  h/copy invecCh0All vecCh02440 $v2440_first:$v2440_last
  h/copy invecCh0All vecCh01205 $v1205_first:$v1205_last
  h/copy invecCh1All vecCh185 $v85_first:$v85_last
  h/copy invecCh1All vecCh12440 $v2440_first:$v2440_last
  h/copy invecCh1All vecCh11205 $v1205_first:$v1205_last

  c++exec double m,s; int l=-1; \
	  MeanSigma(vecCh085,m,s)  ; vecCh085   -= m;\
  	  MeanSigma(vecCh02440,m,s); vecCh02440 -= m;\
	  MeanSigma(vecCh01205,m,s); vecCh01205 -= m;\
	  MeanSigma(vecCh185,m,s)  ; vecCh185   -= m;\
	  MeanSigma(vecCh12440,m,s); vecCh12440 -= m;\
	  MeanSigma(vecCh11205,m,s); vecCh11205 -= m;\
	  TVector<r_8> vecCh0All(invecCh0All.NElts()); KeepObj(vecCh0All); \
	  TVector<r_8> vecCh1All(invecCh1All.NElts()); KeepObj(vecCh1All); \
	  for (int i=0;i<vecCh085.NElts();i++){l++;vecCh0All(l)=vecCh085(i);vecCh1All(l)=vecCh185(i);}\
	  for (int j=0;j<vecCh02440.NElts();j++){l++;vecCh0All(l)=vecCh02440(j);vecCh1All(l)=vecCh12440(j);}\
	  for (int k=0;k<vecCh01205.NElts();k++){l++;vecCh0All(l)=vecCh01205(k);vecCh1All(l)=vecCh11205(k);}
  ## End All Clusters
endif
 
set sigmaCh0 ""
set errsigCh0 ""
set sigmaCh1 ""
set errsigCh1 ""

c++compile rebining
c++link rebining.so dorebin

foreach ipack ( $packVal )

#Packing per ipack
  del invec 
  del outvec
  cp vecCh0All invec
  call dorebin $ipack
  mean0 = ${outvec.sum}/${outvec.size}
  sigma0 = sqrt(${outvec.sumsq}/${outvec.size}-${mean0}*${mean0})
  errsig0 = ${sigma0}/sqrt(2*${outvec.size})	
  set sigmaCh0 "${sigmaCh0} ${sigma0}"	
  set errsigCh0 "${errsigCh0} ${errsig0}"	
#
  del invec
  del outvec
  cp vecCh1All invec
  call dorebin $ipack
  mean1 = ${outvec.sum}/${outvec.size}
  sigma1 = sqrt(${outvec.sumsq}/${outvec.size}-${mean1}*${mean1})
  errsig1 = ${sigma1}/sqrt(2*${outvec.size})	
  set sigmaCh1 "${sigmaCh1} ${sigma1}"	
  set errsigCh1 "${errsigCh1} ${errsig1}"
end

newnt nt0 x y ey
newnt nt1 x y ey

set x0 ( $packVal )
set y0 ( $sigmaCh0 )
set ey0 ( $errsigCh0 )

set x1 ( $packVal )
set y1 ( $sigmaCh1 )
set ey1 ( $errsigCh1 )

for i 0:$#x0
 line2nt nt0 $x0[i] $y0[i] $ey0[i]
 line2nt nt1 $x1[i] $y1[i] $ey1[i]
end

newwin 1 1
plot2de nt0 x y 0 ey 1 "blue marker=fcircle,9 notit nsta"     
plot2de nt1 x y 0 ey 1 "same red  marker=fcircle,9 notit nsta"
n = ${#x0}-1
func $y0[0]/sqrt(x) $x0[0] $x0[n]  100 "same"
settitle "Sigma [$flow,$fhigh]MHz ${source} Ch 0 (blue) Ch 1 (red)" ' ' $defatt
setaxelabels "num of cycles" "Sigma (a.u)" $axedefatt

del h0 h1
set xmin -0.01
set xmax 0.01
newh1d h0 $xmin $xmax 200
newh1d h1 $xmin $xmax 200
if ( $offFilt == 0 ) then
  if ( $gain == 0 ) then
    del h0 h1
    newh1d h0 -0.0001 0.0001 200
    newh1d h1 -0.0001 0.0001 200
  endif
  newwin 1 1
  n/proj h0 onoffevol.diffonoffRaw0f$flow$fhigh ! ! ! "blue notit"
  n/proj h1 onoffevol.diffonoffRaw1f$flow$fhigh ! ! ! "same red notit"
  settitle "diffonoffRaw [$flow,$fhigh]MHz ${source} Ch 0 (blue) Ch 1 (red)" ' ' $defatt
  newwin 1 1
  n/pl onoffevol.diffonoffRaw1f$flow$fhigh%cycle ! ! "cpts red notit"
  n/pl onoffevol.diffonoffRaw0f$flow$fhigh%cycle ! ! "cpts same blue notit"
  settitle "diffonoffRaw [$flow,$fhigh]MHz ${source} Ch 0 (blue) Ch 1 (red)" ' ' $defatt
else
  newwin 1 1
  n/proj h0 onoffevol.onoffRaw0f$flow$fhigh ! ! ! "cpts blue notit"
  n/proj h1 onoffevol.onoffRaw1f$flow$fhigh ! ! ! "cpts same red notit"
  settitle "onoffRaw [$flow,$fhigh]MHz ${source} Ch 0 (blue) Ch 1 (red)" ' ' $defatt
  newwin 1 1
  n/pl onoffevol.onoffRaw0f$flow$fhigh%cycle ! ! "cpts blue notit"
  n/pl onoffevol.onoffRaw1f$flow$fhigh%cycle ! ! "cpts same red notit"
  settitle "onoffRaw [$flow,$fhigh]MHz ${source} Ch 0 (blue) Ch 1 (red)" ' ' $defatt
endif

endscript
##########################################
defscript evolAt1400a1415OffOn

graphicatt "xylimits=0,${ncycles},0.99,1.02"

newwin 1 1
n/pl onoffevol.offRaw0f14001415%cycle ! ! "blue cpts notit nsta"
n/pl onoffevol.offRaw1f14001415%cycle ! ! "same red cpts notit nsta"
n/pl onoffevol.onRaw0f14001415%cycle ! ! "same cyan cpts notit nsta"
n/pl onoffevol.onRaw1f14001415%cycle ! ! "same orange cpts notit nsta"
settitle "Raw OFF and ON  ${source} Ch 0 (blue/cyan) Ch 1 (red/orange) ${ncycles}cycles " ' ' $defatt
setaxelabels "cycle" "I[1400,1415]MHz Raw (a.u)" $axedefatt

endscript
##########################################
defscript evolAt1410a1415OffOn

graphicatt "xylimits=0,${ncycles},0.99,1.02"

newwin 1 1
n/pl onoffevol.offRaw0f14101415%cycle ! ! "blue cpts notit nsta"
n/pl onoffevol.offRaw1f14101415%cycle ! ! "same red cpts notit nsta"
n/pl onoffevol.onRaw0f14101415%cycle ! ! "same cyan cpts notit nsta"
n/pl onoffevol.onRaw1f14101415%cycle ! ! "same orange cpts notit nsta"
settitle "Raw (OFF,ON)/OFF  ${source} Ch 0 (blue/cyan) Ch 1 (red/orange) ${ncycles}cycles " ' ' $defatt
setaxelabels "cycle" "I[1410,1415]MHz Raw (a.u)" $axedefatt
	
graphicatt "xylimits=0,${ncycles},-0.005,0.005"
newwin 1 1
n/pl onoffevol.(onRaw0f14101415-offRaw0f14101415)%cycle ! ! "blue cpts notit nsta"
n/pl onoffevol.(onRaw1f14101415-offRaw1f14101415)%cycle ! ! "same red cpts notit nsta"
settitle "Raw (ON-OFF)/OFF  ${source} Ch 0 (blue) Ch 1 (red) ${ncycles}cycles " ' ' $defatt
setaxelabels "cycle" "DI [1410,1415]MHz Raw (a.u)" $axedefatt

endscript
###########################################
defscript evolAt1420SideFreq


#Follow up of the intensity arround the [${f1420low},${f1420high}]MHz frequency in different calibration conditions
# NO calibration


graphicatt "xylimits=0,500,-0.01,0.01"

newwin 1 2
n/pl onoffevol.onoffRaw01420side%cycle ! ! "blue cpts notit nsta"
settitle "Raw (ON-OFF)/OFF  ${source} Ch 0 (blue) Ch 1 (red) ${ncycles}cycles " ' ' $defatt
n/pl onoffevol.onoffRaw11420side%cycle ! ! "red cpts notit nsta"
setaxelabels "cycle" "I[1418,1419]U[1422,1423]MHz Raw (a.u)" $axedefatt


newh1d hSigmaSideRaw0 -0.01 0.01 25
newh1d hSigmaSideRaw1 -0.01 0.01 25

graphicatt ""

newwin 1 1
n/proj hSigmaSideRaw0 onoffevol.onoffRaw01420side ! ! ! "blue cpts notit"
n/proj hSigmaSideRaw1 onoffevol.onoffRaw11420side ! ! ! "same red cpts notit"
settitle "Raw (ON-OFF)/OFF  ${source} Ch 0 (blue) Ch 1 (red) ${ncycles}cycles " ' ' $defatt
setaxelabels "(a.u)" "I[1418,1419]U[1422,1423]MHz Raw" $axedefatt

endscript
###########################################
defscript IntAt1420


#Follow up of the intensity arround the [${f1420low},${f1420high}]MHz 
#frequency in different calibration conditions with baseline removed
# NO calibration

graphicatt "xylimits=0,500,-0.1,0.1"

newwin 1 2
n/pl onoffevol.${nbins1420}*(onoffRaw01420-onoffRaw01420side)%cycle ! ! "blue cpts notit nsta"
settitle "Raw (ON-OFF)/OFF  ${source} Ch 0 (blue) Ch 1 (red) ${ncycles}cycles " ' ' $defatt
n/pl onoffevol.${nbins1420}*(onoffRaw11420-onoffRaw11420side)%cycle ! ! "red cpts notit nsta"
setaxelabels "cycle" "I 1420MHz Raw (a.u)" $axedefatt



newh1d h1420IntRaw0 -0.1 0.1 25
newh1d h1420IntRaw1 -0.1 0.1 25

graphicatt ""

newwin 1 1
n/proj h1420IntRaw0 onoffevol.${nbins1420}*(onoffRaw01420-onoffRaw01420side) ! ! ! "blue cpts notit"
n/proj h1420IntRaw1 onoffevol.${nbins1420}*(onoffRaw11420-onoffRaw11420side) ! ! ! "same red cpts notit"
settitle "Raw (ON-OFF)/OFF  ${source} Ch 0 (blue) Ch 1 (red) ${ncycles}cycles " ' ' $defatt
setaxelabels "(a.u)" "I 1420MHz Raw" $axedefatt

endscript
##################################################
defscript diffOnOff

graphicatt "xylimits=1250,1500,-0.01,0.01"

del s0 s1
objaoper meanOvOffNoCalib row 0 s0
objaoper meanOvOffNoCalib row 1 s1

newwin
plot2d s0 (n/8192)*250+1250 val n>0 "cpts blue notit nsta"
plot2d s1 (n/8192)*250+1250 val n>0 "same cpts red notit nsta"
settitle "plot Raw (ON-OFF)/OFF ${source} ${ncycles} cycles, Ch 0 (blue) Ch 1 (red)"
setaxelabels "Freq. (MHz)" "I (a.u)"

del stot
c++exec TVector<r_4> stot=s0+s1; stot/=2.; KeepObj(stot);

newwin
plot2d stot (n/8192)*250+1250 val n>0 "cpts blue notit nsta"
settitle "Mean Raw (ON-OFF)/OFF ${source} ${ncycles} cycles"
setaxelabels "Freq. (MHz)" "I (a.u)"
endscript
##################################################