| 1 | // GPH 424.1 Planck HFI-L2 Simple Map Making
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| 2 | // Eric Aubourg CEA/DAPNIA/SPP
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| 3 | // This version is able to produce local maps as well
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| 4 | // $Id: quickmap_fio.cc,v 1.1 2003-02-24 09:18:01 aubourg Exp $
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| 5 |
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| 6 | #include <stdlib.h>
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| 7 | #include <stdio.h>
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| 8 | #include "toi.h"
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| 9 | #include "toiprocessor.h"
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| 10 | #include "fitstoirdr.h"
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| 11 | #include "fitstoiwtr.h"
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| 12 | #include "toimanager.h"
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| 13 | #include "toisegment.h"
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| 14 |
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| 15 | #include "sambainit.h"
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| 16 | #include "toi2map.h"
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| 17 | #include "fitsspherehealpix.h"
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| 18 | #include "localmap.h"
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| 19 | #include "fitslocalmap.h"
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| 20 |
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| 21 | #include <util/PlatformUtils.hpp>
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| 22 | #include <sax/SAXException.hpp>
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| 23 | #include <sax/SAXParseException.hpp>
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| 24 | #include <parsers/DOMParser.hpp>
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| 25 | #include <dom/DOM_DOMException.hpp>
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| 26 |
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| 27 |
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| 28 | void usage(void);
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| 29 |
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| 30 | void usage(void) {
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| 31 | cerr << "usage: gph424_1g xml_options_file" << endl;
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| 32 | exit(-1);
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| 33 | }
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| 34 |
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| 35 | // Prefs structure
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| 36 |
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| 37 | struct Gph424_1_Prefs {
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| 38 | struct {
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| 39 | struct {
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| 40 | string fname;
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| 41 | string flagfname;
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| 42 | vector<FlagToiDef> flags;
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| 43 | string coord1; // TOI name
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| 44 | string coord2; // TOI name
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| 45 | unsigned long typcoord;
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| 46 | } pointing;
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| 47 | struct {
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| 48 | string fname;
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| 49 | string flagfname;
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| 50 | vector<FlagToiDef> flags;
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| 51 | string toiname;
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| 52 | } signal;
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| 53 | } input;
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| 54 |
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| 55 | struct {
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| 56 | string fname;
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| 57 | string wfname; // weight
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| 58 | unsigned long typcoord;
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| 59 | string typmap; // local, healpix...
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| 60 | struct {
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| 61 | int nlat;
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| 62 | } healpix_opt;
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| 63 | struct {
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| 64 | int npx, npy;
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| 65 | double org1,org2;
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| 66 | double anglex, angley;
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| 67 | } local_opt;
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| 68 | } output;
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| 69 |
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| 70 | int nproc;
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| 71 | long snb, sne;
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| 72 |
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| 73 | void dump() {
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| 74 | cout << "*** GPH424-1 settings\n";
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| 75 | cout << " input\n";
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| 76 | cout << " | pointing\n";
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| 77 | cout << " | | fname " << input.pointing.fname << "\n";
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| 78 | cout << " | | flagfname " << input.pointing.flagfname << "\n";
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| 79 | for (int i=0; i<input.pointing.flags.size(); i++) {
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| 80 | cout << " | | | flag " << i << " : " << input.pointing.flags[i] << "\n";
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| 81 | }
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| 82 | cout << " | | coord1 " << input.pointing.coord1 << "\n";
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| 83 | cout << " | | coord2 " << input.pointing.coord2 << "\n";
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| 84 | cout << " | | typcoord "
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| 85 | << ((input.pointing.typcoord & TypCoordGal) ? "G" : "E")
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| 86 | << ((input.pointing.typcoord & TypCoord1H) ? "H" :
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| 87 | (input.pointing.typcoord & TypCoord1D) ? "D" : "R")
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| 88 | << ((input.pointing.typcoord & TypCoord1C) ? "C" : "L")
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| 89 | << ((input.pointing.typcoord & TypCoord2H) ? "H" :
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| 90 | (input.pointing.typcoord & TypCoord2D) ? "D" : "R")
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| 91 | << ((input.pointing.typcoord & TypCoord2C) ? "C" : "L")
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| 92 | << "\n";
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| 93 | cout << " | signal\n";
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| 94 | cout << " | | fname " << input.signal.fname << "\n";
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| 95 | cout << " | | flagfname " << input.signal.flagfname << "\n";
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| 96 | {for (int i=0; i<input.signal.flags.size(); i++) {
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| 97 | cout << " | | | flag " << i << " : " << input.signal.flags[i] << "\n";
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| 98 | }}
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| 99 | cout << " | | toiname " << input.signal.toiname << "\n";
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| 100 | cout << " output\n";
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| 101 | cout << " | fname " << output.fname << "\n";
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| 102 | cout << " | wfname " << output.wfname << "\n";
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| 103 | cout << " | typcoord "
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| 104 | << ((output.typcoord & TypCoordGal) ? "G" : "E")
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| 105 | << "\n";
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| 106 | cout << " | typmap " << output.typmap << "\n";
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| 107 | if (output.typmap == "healpix") {
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| 108 | cout << " | | nlat " << output.healpix_opt.nlat << "\n";
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| 109 | } else if (output.typmap == "local") {
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| 110 | cout << " | | npix " << output.local_opt.npx << ", " << output.local_opt.npy << "\n";
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| 111 | cout << " | | origin " << output.local_opt.org1 << ", " << output.local_opt.org2 << "\n";
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| 112 | cout << " | | extension " << output.local_opt.anglex << ", " << output.local_opt.angley << "\n";
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| 113 | }
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| 114 | cout << " nproc " << nproc << "\n";
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| 115 | if (sne >= 0 && snb >= 0) {
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| 116 | cout << " samples " << snb << " " << sne << "\n";
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| 117 | }
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| 118 | cout << "***" << endl;
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| 119 | }
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| 120 | };
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| 121 |
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| 122 | DOM_Node DOMGetNode(DOM_Document& doc, string path) {
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| 123 | DOM_Element el = doc.getDocumentElement();
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| 124 |
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| 125 | while (path != "") {
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| 126 | if (path[0] == '/') {
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| 127 | path = path.substr(1);
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| 128 | }
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| 129 | if (path == "") break;
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| 130 | int x = path.find('/');
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| 131 | string pathElem;
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| 132 | if (x == -1) {
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| 133 | pathElem = path;
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| 134 | path = "";
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| 135 | } else {
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| 136 | pathElem = path.substr(0, x);
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| 137 | path = path.substr(x);
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| 138 | }
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| 139 | DOM_Node n = el.getElementsByTagName(pathElem.c_str()).item(0);
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| 140 | if (n==0) return n;
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| 141 | el = (DOM_Element&) n;
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| 142 | }
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| 143 | return el;
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| 144 | }
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| 145 |
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| 146 | string DOMGetString(DOM_Document& doc, string path, string def="") {
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| 147 | DOM_Node n = DOMGetNode(doc, path);
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| 148 | if (n==0) return def;
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| 149 | char* s = n.getFirstChild().getNodeValue().transcode();
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| 150 | char* p=s; while ((*p)==' ') p++;
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| 151 | char* q=p+strlen(p)-1;
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| 152 | while (q>p && *q==' ') {
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| 153 | *q = '\0';
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| 154 | q--;
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| 155 | }
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| 156 | string ss = p;
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| 157 | free(s);
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| 158 | return ss;
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| 159 | }
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| 160 |
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| 161 | bool DOMHasOption(DOM_Document& doc, string path) {
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| 162 | DOM_Node n = DOMGetNode(doc, path);
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| 163 | return n != 0;
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| 164 | }
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| 165 |
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| 166 | void parseFlags(DOM_Node flagnode, vector<FlagToiDef>& flgs) {
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| 167 | DOM_Element elt = (DOM_Element&) flagnode;
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| 168 | DOM_NodeList l = elt.getElementsByTagName("flag");
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| 169 | // prepare array
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| 170 | flgs.clear();
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| 171 | flgs.insert(flgs.begin(), l.getLength(), (FlagToiDef)0);
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| 172 | for (int i = 0; i<l.getLength(); i++) {
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| 173 | DOM_Node node = l.item(i);
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| 174 | DOM_Element elt = (DOM_Element&) node;
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| 175 | DOMString scol = elt.getAttribute("column");
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| 176 | DOMString sval = elt.getAttribute("kind");
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| 177 | int col = atoi(scol.transcode());
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| 178 | int value = atoi(sval.transcode());
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| 179 | flgs[col-1] = (FlagToiDef) value;
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| 180 | }
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| 181 | }
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| 182 |
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| 183 | void parsePrefs(string prefFile, Gph424_1_Prefs& prefs) {
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| 184 | try {
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| 185 | XMLPlatformUtils::Initialize();
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| 186 | } catch (const XMLException& toCatch) {
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| 187 | cerr << "Error during XML initialization! :\n"
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| 188 | << toCatch.getMessage() << endl;
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| 189 | exit(-1);
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| 190 | }
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| 191 |
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| 192 | DOMParser* parser = new DOMParser;
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| 193 |
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| 194 | try {
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| 195 | parser->parse(prefFile.c_str());
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| 196 | } catch (const XMLException& toCatch) {
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| 197 | cerr << "\nError during parsing: '" << prefFile << "'\n"
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| 198 | << "Exception message is: \n"
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| 199 | << toCatch.getMessage() << "\n" << endl;
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| 200 | exit(-1);
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| 201 | } catch (const DOM_DOMException& toCatch) {
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| 202 | cerr << "\nDOM Error during parsing: '" << prefFile << "'\n"
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| 203 | << "DOMException code is: \n"
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| 204 | << toCatch.code << "\n" << endl;
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| 205 | exit(-1);
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| 206 | } catch (...) {
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| 207 | cerr << "\nUnexpected exception during parsing: '" << prefFile << "'\n";
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| 208 | exit(-1);
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| 209 | }
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| 210 |
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| 211 | DOM_Document doc = parser->getDocument();
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| 212 |
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| 213 | prefs.input.pointing.fname = DOMGetString(doc, "/input/pointing/fname");
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| 214 | if (DOMHasOption(doc, "/input/pointing/flags")) {
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| 215 | prefs.input.pointing.flagfname =
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| 216 | DOMGetString(doc, "/input/pointing/flags/fname");
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| 217 | DOM_Node flagnode = DOMGetNode(doc, "/input/pointing/flags");
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| 218 | parseFlags(flagnode, prefs.input.pointing.flags);
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| 219 | }
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| 220 | prefs.input.pointing.coord1 = DOMGetString(doc, "/input/pointing/coord1","phi");
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| 221 | prefs.input.pointing.coord2 = DOMGetString(doc, "/input/pointing/coord2","theta");
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| 222 | bool inequ = DOMHasOption(doc, "/input/pointing/equatorial");
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| 223 | bool ingal = DOMHasOption(doc, "/input/pointing/galactic");
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| 224 | prefs.input.pointing.typcoord = ingal ? TypCoordGal : TypCoordEq;
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| 225 | bool inhd = DOMHasOption(doc, "/input/pointing/hourdeg");
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| 226 | bool indd = DOMHasOption(doc, "/input/pointing/degdeg");
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| 227 | bool inrr = DOMHasOption(doc, "/input/pointing/radian");
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| 228 | bool iscolat = DOMHasOption(doc, "/input/pointing/colat");
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| 229 | if (inhd) {
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| 230 | prefs.input.pointing.typcoord |= TypCoord1H|TypCoord2D;
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| 231 | } else if (indd) {
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| 232 | prefs.input.pointing.typcoord |= TypCoord1D|TypCoord2D;
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| 233 | } else if (inrr) {
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| 234 | prefs.input.pointing.typcoord |= TypCoord1R|TypCoord2R;
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| 235 | } else if (prefs.input.pointing.typcoord & TypCoordEq) {
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| 236 | prefs.input.pointing.typcoord = TypCoordEqStd;
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| 237 | } else {
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| 238 | prefs.input.pointing.typcoord = TypCoordGalStd;
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| 239 | }
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| 240 | if (iscolat) {
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| 241 | prefs.input.pointing.typcoord |= TypCoord2C;
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| 242 | }
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| 243 |
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| 244 | prefs.input.signal.fname = DOMGetString(doc, "/input/signal/fname");
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| 245 | prefs.input.signal.toiname = DOMGetString(doc, "/input/signal/toiname");
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| 246 | if (DOMHasOption(doc, "/input/signal/flags")) {
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| 247 | prefs.input.signal.flagfname =
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| 248 | DOMGetString(doc, "/input/signal/flags/fname");
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| 249 | DOM_Node flagnode = DOMGetNode(doc, "/input/signal/flags");
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| 250 | parseFlags(flagnode, prefs.input.signal.flags);
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| 251 | }
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| 252 | prefs.output.fname = DOMGetString(doc, "/output/fname");
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| 253 | prefs.output.wfname = DOMGetString(doc, "/output/wfname");
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| 254 | bool outequ = DOMHasOption(doc, "/output/equatorial");
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| 255 | bool outgal = DOMHasOption(doc, "/output/galactic");
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| 256 | prefs.output.typcoord = outgal ? TypCoordGal : TypCoordEq;
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| 257 | bool outhd = DOMHasOption(doc, "/output/hourdeg");
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| 258 | bool outdd = DOMHasOption(doc, "/output/degdeg");
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| 259 | bool outrr = DOMHasOption(doc, "/output/radian");
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| 260 | if (outhd) {
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| 261 | prefs.output.typcoord |= TypCoord1H | TypCoord2D;
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| 262 | } else if (outdd) {
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| 263 | prefs.output.typcoord |= TypCoord1D | TypCoord2D;
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| 264 | } else if (outrr) {
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| 265 | prefs.output.typcoord |= TypCoord1R | TypCoord2R;
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| 266 | } else if (prefs.output.typcoord & TypCoordEq) {
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| 267 | prefs.output.typcoord = TypCoordEqStd;
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| 268 | } else {
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| 269 | prefs.output.typcoord |= TypCoordGalStd;
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| 270 | }
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| 271 |
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| 272 | prefs.output.typmap = DOMHasOption(doc, "/output/local") ? "local" :
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| 273 | (DOMHasOption(doc, "/output/healpix") ? "healpix" : "healpix");
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| 274 | prefs.output.healpix_opt.nlat = atoi(DOMGetString(doc, "/output/healpix/nlat", "128").c_str());
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| 275 |
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| 276 | string s = DOMGetString(doc, "/output/local/npx");
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| 277 | prefs.output.local_opt.npx = prefs.output.local_opt.npy = -1;
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| 278 | int nc = sscanf(s.c_str(), "%d %d", &prefs.output.local_opt.npx, &prefs.output.local_opt.npy);
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| 279 | if (nc == 1) prefs.output.local_opt.npy = prefs.output.local_opt.npx;
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| 280 |
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| 281 | s = DOMGetString(doc, "/output/local/center");
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| 282 | prefs.output.local_opt.org1 = prefs.output.local_opt.org2 = 0;
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| 283 | sscanf(s.c_str(), "%lg %lg", &prefs.output.local_opt.org1, &prefs.output.local_opt.org2);
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| 284 |
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| 285 | s = DOMGetString(doc, "/output/local/angle");
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| 286 | prefs.output.local_opt.anglex = prefs.output.local_opt.angley = 0;
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| 287 | nc = sscanf(s.c_str(), "%d %d", &prefs.output.local_opt.anglex, &prefs.output.local_opt.angley);
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| 288 | if (nc == 1) prefs.output.local_opt.angley = prefs.output.local_opt.anglex;
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| 289 |
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| 290 | prefs.nproc = atoi(DOMGetString(doc, "/nproc", "1").c_str());
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| 291 |
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| 292 | s = DOMGetString(doc, "/samples", "-1 -1");
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| 293 | sscanf(s.c_str(), "%ld %ld", &prefs.snb, &prefs.sne);
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| 294 | }
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| 295 |
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| 296 | int main(int argc, char** argv) {
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| 297 |
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| 298 | // Read prefs
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| 299 | Gph424_1_Prefs prefs;
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| 300 | parsePrefs(argv[1], prefs);
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| 301 | prefs.dump();
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| 302 |
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| 303 | // Assemble pipeline
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| 304 |
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| 305 | TOIManager* mgr = TOIManager::getManager();
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| 306 |
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| 307 | // Two input files
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| 308 |
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| 309 | FITSTOIReader inPoint(prefs.input.pointing.fname);
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| 310 | FITSTOIReader inSig (prefs.input.signal.fname);
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| 311 |
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| 312 | inPoint.setImplicitSN();
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| 313 | inSig.setImplicitSN();
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| 314 |
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| 315 | // Associate flag files
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| 316 |
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| 317 | if (prefs.input.pointing.flagfname != "") {
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| 318 | inPoint.setFlagFile(prefs.input.pointing.flagfname, prefs.input.pointing.flags);
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| 319 | }
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| 320 |
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| 321 | if (prefs.input.signal.flagfname != "") {
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| 322 | inSig.setFlagFile(prefs.input.signal.flagfname, prefs.input.signal.flags);
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| 323 | }
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| 324 |
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| 325 | // Prepare maps for output
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| 326 |
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| 327 | PixelMap<r_8>* map;
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| 328 | PixelMap<r_8>* wmap;
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| 329 |
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| 330 | if (prefs.output.typmap == "local") {
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| 331 | LocalMap<r_8>* lmap = new LocalMap<r_8>(prefs.output.local_opt.npx, prefs.output.local_opt.npy);
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| 332 | lmap->SetOrigin(prefs.output.local_opt.org1, prefs.output.local_opt.org2);
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| 333 | lmap->SetSize(prefs.output.local_opt.anglex, prefs.output.local_opt.angley);
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| 334 | map = lmap;
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| 335 | wmap = new LocalMap<r_8>(*lmap);
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| 336 | } else if (prefs.output.typmap == "healpix") {
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| 337 | map = new SphereHEALPix<r_8>(prefs.output.healpix_opt.nlat);
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| 338 | wmap = new SphereHEALPix<r_8>(prefs.output.healpix_opt.nlat);
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| 339 | } else {
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| 340 | cout << "typmap " << prefs.output.typmap << " unknown" << endl;
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| 341 | exit(-1);
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| 342 | }
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| 343 |
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| 344 | TOI2Map toi2m(map,wmap);
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| 345 |
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| 346 | toi2m.SetEquinox(2000.);
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| 347 | toi2m.SetCoorIn((TypAstroCoord) prefs.input.pointing.typcoord);
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| 348 | toi2m.SetCoorMap((TypAstroCoord) prefs.output.typcoord);
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| 349 |
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| 350 | TOISegmented * toicoord1in = new TOISegmented(prefs.input.pointing.coord1);
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| 351 | inPoint.addOutput(prefs.input.pointing.coord1,toicoord1in);
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| 352 | toi2m.addInput("Coord1In",toicoord1in);
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| 353 |
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| 354 | TOISegmented * toicoord2in = new TOISegmented(prefs.input.pointing.coord2);
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| 355 | inPoint.addOutput(prefs.input.pointing.coord2,toicoord2in);
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|---|
| 356 | toi2m.addInput("Coord2In",toicoord2in);
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| 357 |
|
|---|
| 358 | TOISegmented * toibolin = new TOISegmented("toi_bolo_in");
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| 359 | inSig.addOutput(prefs.input.signal.toiname,toibolin);
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| 360 | toi2m.addInput("BoloIn",toibolin);
|
|---|
| 361 |
|
|---|
| 362 | // Start processing
|
|---|
| 363 |
|
|---|
| 364 | if (prefs.snb >= 0 && prefs.sne >= 0) {
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|---|
| 365 | toi2m.setRequestedSample(prefs.snb, prefs.sne);
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|---|
| 366 | }
|
|---|
| 367 |
|
|---|
| 368 | mgr->startAll();
|
|---|
| 369 | mgr->waitForAll();
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|---|
| 370 |
|
|---|
| 371 | // Save maps
|
|---|
| 372 |
|
|---|
| 373 | {
|
|---|
| 374 | FitsOutFile sfits(prefs.output.fname,FitsFile::clear);
|
|---|
| 375 | cout<<"Creating map fits file "<<prefs.output.fname<<endl;
|
|---|
| 376 | // Would need some generic mechanism here $CHECK$ $$TBD$$
|
|---|
| 377 | if (map->TypeOfMap() == "RING") {
|
|---|
| 378 | sfits << * (SphereHEALPix<r_8>*)map;
|
|---|
| 379 | } else if (map->TypeOfMap() == "LOCAL") {
|
|---|
| 380 | sfits << * (LocalMap<r_8>*)map;
|
|---|
| 381 | } else {
|
|---|
| 382 | cout << "error, unknown type " << map->TypeOfMap() << endl;
|
|---|
| 383 | }
|
|---|
| 384 | }
|
|---|
| 385 |
|
|---|
| 386 | {
|
|---|
| 387 | FitsOutFile swfits(prefs.output.wfname,FitsFile::clear);
|
|---|
| 388 | cout<<"Creating map weight fits file "<<prefs.output.wfname<<endl;
|
|---|
| 389 | // swfits << *wmap;
|
|---|
| 390 | if (wmap->TypeOfMap() == "RING") {
|
|---|
| 391 | swfits << * (SphereHEALPix<r_8>*)wmap;
|
|---|
| 392 | } else if (wmap->TypeOfMap() == "LOCAL") {
|
|---|
| 393 | swfits << * (LocalMap<r_8>*)wmap;
|
|---|
| 394 | } else {
|
|---|
| 395 | cout << "error, unknown type " << wmap->TypeOfMap() << endl;
|
|---|
| 396 | }
|
|---|
| 397 | }
|
|---|
| 398 |
|
|---|
| 399 | delete map;
|
|---|
| 400 | delete wmap;
|
|---|
| 401 |
|
|---|
| 402 | return 0;
|
|---|
| 403 | }
|
|---|
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