| 1 | // ArchTOIPipe (C) CEA/DAPNIA/SPP IN2P3/LAL
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| 2 | // Eric Aubourg
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| 3 | // Christophe Magneville
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| 4 | // Reza Ansari
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| 5 | // $Id: simofftst.cc,v 1.1 2002-05-14 13:06:58 ansari Exp $
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| 6 |
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| 7 | /* Test de processeurs ds simtoipr.cc - Reza Avril 2001
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| 8 |
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| 9 | ---------------- Exemple d'appel ---------------------
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| 10 | csh> simofftst -start 104385384 -end 104399964 -range -500,500 \
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| 11 | -intoi boloMuV_26 -wtoi 8192 -wdegli 1024 \
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| 12 | inputbolo.fits filt.fits xx.ppf
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| 13 | # Avec Filtre de Fourier
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| 14 | csh> simofftst -start 104385384 -end 104399964 -range -500,500 \
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| 15 | -intoi boloMuV_26 -wtoi 8192 -wdegli 1024 \
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| 16 | -wfft 4096 -keepfft 5 -killfreq 15,4,2.5 \
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| 17 | inputbolo.fits filtfft.fits spectre.ppf
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| 18 | # Autre exemple b545k02
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| 19 | cool> ./simofftst -start 104389122 -end 104649122 -range -1000.,1000. -intoi boloMu
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| 20 | V_23 -wtoi 8192 -wdegli 1024 -wfft 4096 -keepfft 5 -killfreq 15,4,2.5 Cmv/b545k02
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| 21 | 2_16.00_16.49.fits b545.fits b545.ppf
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| 22 |
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| 23 | */
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| 24 |
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| 25 |
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| 26 |
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| 27 | #include "machdefs.h"
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| 28 | #include <math.h>
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| 29 | #include <unistd.h>
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| 30 |
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| 31 | #include "toimanager.h"
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| 32 | #include "cgt.h"
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| 33 | #include "fitstoirdr.h"
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| 34 | #include "fitstoiwtr.h"
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| 35 | #include "simtoipr.h"
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| 36 | #include "simoffset.h"
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| 37 | #include "nooppr.h"
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| 38 | #include "timing.h"
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| 39 | #include "sambainit.h"
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| 40 | #include <stdexcept>
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| 41 |
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| 42 | void Usage(bool fgerr)
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| 43 | {
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| 44 | cout << endl;
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| 45 | if (fgerr) {
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| 46 | cout << " simofftst : Argument Error ! simofftst -h for usage " << endl;
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| 47 | exit(1);
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| 48 | }
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| 49 | else {
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| 50 | cout << "\n Usage : simofftst [-intoi toiname] [-start snb] [-end sne] \n"
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| 51 | << " [-dbg] [-wtoi sz] [-wdegli sz] [-range min,max] \n"
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| 52 | << " [-degli ns,ns2,mxpt,mnpt,wrec] [-soff wsz,nptfit,degpol] \n"
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| 53 | << " [-soffnt PPFName] [-gfilt wsz,sigma] \n"
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| 54 | << " [-nooutflg] [-nowrtms] [-nowrticd] [-prstat] [-useseqbuff] \n"
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| 55 | << " inFitsName outFitsName \n"
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| 56 | << " -dbg : sets TOISeqBuffered debug level to 1 \n"
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| 57 | << " -start snb : sets the start sample num \n"
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| 58 | << " -end sne : sets the end sample num \n"
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| 59 | << " -range min,max : sets the acceptable range for intoi \n"
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| 60 | << " default= -16000,16000\n"
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| 61 | << " -intoi toiName : select input TOI name (def bolo)\n"
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| 62 | << " -wtoi sz : sets TOISeqBuff buffer size (def= 8192)\n"
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| 63 | << " -wdegli sz : sets deglitcher window size (def= 512) \n"
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| 64 | << " -degli ns,ns2,maxnpt,minnpt,wrec : sets deglitcher parameters\n"
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| 65 | << " -soff wsz,nptfit,degpol : set SimpleOffsetEstimator parameters\n"
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| 66 | << " -soffnt PPFName : Writes out SimpleOffsetEstimator NTuple \n"
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| 67 | << " -gfilt wsz,sigma : Activate gaussian filter (par= window size, sigma) \n"
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| 68 | // << " -wfft sz : Activate Fourier filter and sets its width \n"
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| 69 | // << " -keepfft n : Keeps n spectra (if Fourier filter activated) \n"
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| 70 | // << " -killfreq bf,nharm,sigf : kills nharm frequency, basefreq=bf \n"
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| 71 | // << " with a gaussian with width=sigf \n"
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| 72 | << " -nooutflg : Don't write flags to output FITS \n"
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| 73 | << " -wrtms : Write mean/sigma TOI's from Deglitcher \n"
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| 74 | << " -wrticd : Write incopie,degli TOI's from deglitcher \n"
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| 75 | << " -prstat : PrintStat with ProcSampleCounter \n"
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| 76 | << " -useseqbuff : Use TOISeqBuffered TOI's (default: TOISegmented) \n"
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| 77 | << endl;
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| 78 | }
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| 79 | }
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| 80 |
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| 81 | int main(int narg, char** arg) {
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| 82 |
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| 83 | if ((narg > 1) && (strcmp(arg[1],"-h") == 0) ) Usage(false);
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| 84 |
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| 85 | cout << "simofftst starting - Decoding arguments " << " narg=" << narg << endl;
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| 86 |
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| 87 | bool fgdbg = false;
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| 88 | bool fgsetstart = false;
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| 89 |
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| 90 | bool fgprstat = false;
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| 91 | bool fgsegmented = true;
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| 92 |
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| 93 | int dbglev = 0;
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| 94 |
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| 95 | int wtoi = 8192;
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| 96 | int wdegli = 512;
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| 97 |
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| 98 | int wfft = 4096;
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| 99 | int keepfft = 0;
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| 100 | int nmax = 10;
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| 101 | int istart = 0;
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| 102 | int iend = 0;
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| 103 |
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| 104 | double range_min = -16000;
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| 105 | double range_max = 16000.;
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| 106 |
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| 107 | // Deglitcher parameters
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| 108 | double degli_ns1 = 3.;
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| 109 | double degli_ns2 = 1.5;
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| 110 | int degli_minnpt = 2;
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| 111 | int degli_maxnpt = 4;
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| 112 | int degli_wrec = 10;
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| 113 |
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| 114 | // SimpleOffsetEstimator parameters
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| 115 | int soff_mwsz = 256;
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| 116 | int soff_nptfit = 5;
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| 117 | int soff_degpol = 2;
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| 118 | bool soff_nt = false;
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| 119 | string soff_nt_ppfname = "";
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| 120 |
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| 121 | // Gaussian filter parameters
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| 122 | bool gfilt_fg = false;
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| 123 | int gfilt_wsz = 16;
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| 124 | double gfilt_sigma = 2.;
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| 125 |
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| 126 | // File names
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| 127 | string infile;
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| 128 | string outfile;
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| 129 | string outppfname;
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| 130 | string intoi = "bolo";
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| 131 |
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| 132 | bool fg_wrtflag = true;
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| 133 | bool fg_wrtms = false;
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| 134 | bool fg_wrticd = false;
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| 135 |
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| 136 |
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| 137 | bool fg_f_filt = false;
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| 138 | bool fg_killfreq = false;
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| 139 | int bf_killfreq = 1;
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| 140 | int nharm_killfreq = 1;
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| 141 | double sigf_killfreq = 1.;
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| 142 |
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| 143 | if (narg < 4) Usage(true);
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| 144 | int ko=1;
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| 145 | // decoding arguments
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| 146 | for(int ia=1; ia<narg; ia++) {
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| 147 | if (strcmp(arg[ia],"-start") == 0) {
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| 148 | if (ia == narg-1) Usage(true); // -start est suivi d'un argument
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| 149 | istart = atoi(arg[ia+1]); ia++;
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| 150 | fgsetstart = true;
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| 151 | }
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| 152 | else if (strcmp(arg[ia],"-end") == 0) {
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| 153 | if (ia == narg-1) Usage(true);
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| 154 | iend = atoi(arg[ia+1]); ia++;
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| 155 | }
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| 156 | else if (strcmp(arg[ia],"-wtoi") == 0) {
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| 157 | if (ia == narg-1) Usage(true);
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| 158 | wtoi = atoi(arg[ia+1]); ia++;
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| 159 | }
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| 160 | else if (strcmp(arg[ia],"-wdegli") == 0) {
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| 161 | if (ia == narg-1) Usage(true);
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| 162 | wdegli = atoi(arg[ia+1]); ia++;
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| 163 | }
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| 164 | else if (strcmp(arg[ia],"-degli") == 0) {
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| 165 | if (ia == narg-1) Usage(true);
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| 166 | sscanf(arg[ia+1],"%lf,%lf,%d,%d,%d", °li_ns1, °li_ns2,
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| 167 | °li_maxnpt, °li_minnpt, °li_wrec);
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| 168 | ia++;
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| 169 | }
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| 170 | else if (strcmp(arg[ia],"-soff") == 0) {
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| 171 | if (ia == narg-1) Usage(true);
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| 172 | sscanf(arg[ia+1],"%d,%d,%d", &soff_mwsz, &soff_nptfit, &soff_degpol);
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| 173 | ia++;
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| 174 | }
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| 175 | else if (strcmp(arg[ia],"-soffnt") == 0) {
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| 176 | soff_nt = true;
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| 177 | soff_nt_ppfname = arg[ia+1]; ia++;
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| 178 | }
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| 179 | else if (strcmp(arg[ia],"-gfilt") == 0) {
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| 180 | if (ia == narg-1) Usage(true);
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| 181 | sscanf(arg[ia+1],"%d,%lf", &gfilt_wsz, &gfilt_sigma);
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| 182 | gfilt_fg = true;
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| 183 | ia++;
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| 184 | }
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| 185 | else if (strcmp(arg[ia],"-wfft") == 0) {
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| 186 | if (ia == narg-1) Usage(true);
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| 187 | wfft = atoi(arg[ia+1]); ia++;
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| 188 | fg_f_filt = true;
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| 189 | }
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| 190 | else if (strcmp(arg[ia],"-keepfft") == 0) {
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| 191 | if (ia == narg-1) Usage(true);
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| 192 | keepfft = atoi(arg[ia+1]); ia++;
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| 193 | }
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| 194 | else if (strcmp(arg[ia],"-killfreq") == 0) {
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| 195 | if (ia == narg-1) Usage(true);
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| 196 | sscanf(arg[ia+1],"%d,%d,%lf",&bf_killfreq, &nharm_killfreq, &sigf_killfreq);
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| 197 | fg_killfreq = true;
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| 198 | ia++;
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| 199 | }
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| 200 | else if (strcmp(arg[ia],"-range") == 0) {
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| 201 | if (ia == narg-1) Usage(true);
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| 202 | sscanf(arg[ia+1],"%lf,%lf",&range_min, &range_max);
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| 203 | ia++;
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| 204 | }
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| 205 | else if (strcmp(arg[ia],"-intoi") == 0) {
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| 206 | if (ia == narg-1) Usage(true);
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| 207 | intoi = arg[ia+1]; ia++;
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| 208 | }
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| 209 | else if (strcmp(arg[ia],"-dbg") == 0) fgdbg = true;
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| 210 | else if (strcmp(arg[ia],"-nooutflg") == 0) fg_wrtflag = false;
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| 211 | else if (strcmp(arg[ia],"-wrtms") == 0) fg_wrtms = true;
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| 212 | else if (strcmp(arg[ia],"-wrticd") == 0) fg_wrticd = true;
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| 213 |
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| 214 | else if (strcmp(arg[ia],"-prstat") == 0) fgprstat = true;
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| 215 | else if (strcmp(arg[ia],"-useseqbuff") == 0) fgsegmented = false;
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| 216 |
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| 217 | else { ko = ia; break; } // Debut des noms
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| 218 | }
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| 219 |
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| 220 | if (iend < istart) iend = istart+wtoi*(nmax+5);
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| 221 | if ((narg-ko) < 2) Usage(true);
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| 222 | infile = arg[ko];
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| 223 | outfile = arg[ko+1];
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| 224 | // outppfname = arg[ko+2];
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| 225 |
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| 226 | cout << " Initializing SOPHYA ... " << endl;
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| 227 | SophyaInit();
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| 228 | InitTim();
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| 229 |
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| 230 | cout << ">>>> simofftst: Infile= " << infile << " outFile="
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| 231 | << outfile << endl;
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| 232 | cout << ">>>> Window Size WTOI= " << wtoi << " WDEGLI= " << wdegli
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| 233 | << " iStart= " << istart << " iEnd= " << iend << endl;
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| 234 | cout << ">>>> InTOIName= " << intoi << endl;
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| 235 |
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| 236 | try {
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| 237 | TOIManager* mgr = TOIManager::getManager();
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| 238 |
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| 239 | // mgr->setRequestedSample(11680920,11710584);
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| 240 | // mgr->setRequestedSample(104121000, 104946120);
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| 241 | if (fgsetstart)
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| 242 | mgr->setRequestedSample(istart, iend);
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| 243 |
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| 244 | cout << "> Creating FITSTOIReader object - InFile=" << infile << endl;
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| 245 | FITSTOIReader r(infile);
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| 246 |
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| 247 | cout << "> Creating SimpleDeglitcher() " << endl;
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| 248 | SimpleDeglitcher degl(wdegli);
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| 249 | degl.SetDetectionParam(degli_ns1, degli_ns2, degli_maxnpt,
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| 250 | degli_minnpt, degli_wrec);
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| 251 | cout << " Setting Range for deglitcher: " << range_min
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| 252 | << " - " << range_max << endl;
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| 253 | degl.SetRange(range_min, range_max);
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| 254 |
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| 255 | cout << "> Creating SimpleDeglitcher(" << soff_mwsz << "," << soff_nptfit
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| 256 | << "," << soff_degpol << ")" << endl;
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| 257 | SimpleOffsetEstimator offes(soff_mwsz, soff_nptfit, soff_degpol);
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| 258 | offes.SavePolyNTuple(soff_nt, soff_nt_ppfname);
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| 259 |
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| 260 | if (gfilt_fg)
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| 261 | cout << "> Creating a GaussianFilter SimpleFilter Object " << endl;
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| 262 | double G_sigma = gfilt_sigma;
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| 263 | double G_a = 1./(G_sigma*sqrt(M_PI*2.));
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| 264 | SimpleFilter filt(gfilt_wsz, SimpleFilter::GaussFilter, G_a, G_sigma);
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| 265 |
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| 266 | cout << "> Creating FITSTOIWriter OutFitsName= " << outfile << endl;
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| 267 | FITSTOIWriter w(outfile);
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| 268 |
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| 269 | CGT plombier(fgsegmented, wtoi);
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| 270 | plombier.SetDebugLevel(dbglev);
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| 271 |
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| 272 | cout << "> Connecting Processors through plombier ... " << endl;
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| 273 | string inname = "in";
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| 274 | plombier.Connect(r, intoi, degl, inname);
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| 275 | plombier.Connect(degl, "out", offes, "in");
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| 276 | if (gfilt_fg) {
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| 277 | plombier.Connect(offes, "out", filt, "in");
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| 278 | plombier.Connect(filt, "out", w, "degoffil", "", 0, fg_wrtflag);
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| 279 | }
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| 280 | else
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| 281 | plombier.Connect(offes, "out", w, "degoff", "", 0, fg_wrtflag);
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| 282 |
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| 283 |
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| 284 | if (fg_wrticd) {
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| 285 | plombier.Connect(degl, "incopie", w, "incopie");
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| 286 | plombier.Connect(offes, "incopie", w, "indegl");
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| 287 | }
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| 288 | if (fg_wrtms) {
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| 289 | plombier.Connect(degl, "mean", w, "meandegl");
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| 290 | plombier.Connect(degl, "sigma", w, "sigdegl");
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| 291 | }
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| 292 |
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| 293 | cout << "> Plombier status before start" << endl;
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| 294 | cout << plombier ;
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| 295 |
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| 296 | cout << offes;
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| 297 |
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| 298 | PrtTim("starting processors");
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| 299 | plombier.Start();
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| 300 |
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| 301 |
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| 302 | // ------------------- Impression continu de stat ------------------------
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| 303 | if (fgprstat) {
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| 304 | ProcSampleCounter<SimpleOffsetEstimator> stats(offes);
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| 305 | stats.InfoMessage() = "simofftst/Info";
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| 306 | stats.PrintStats();
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| 307 | }
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| 308 | // -----------------------------------------------------------------------
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| 309 |
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| 310 | cout << degl;
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| 311 | cout << offes;
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| 312 | if (gfilt_fg) cout << filt;
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| 313 | cout << w;
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| 314 |
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| 315 | mgr->joinAll();
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| 316 | PrtTim("End threads");
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| 317 |
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| 318 | }
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| 319 | catch (PThrowable & exc) {
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| 320 | cerr << "\n simofftst: Catched Exception \n" << (string)typeid(exc).name()
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| 321 | << " - Msg= " << exc.Msg() << endl;
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| 322 | }
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| 323 | catch (const std::exception & sex) {
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| 324 | cerr << "\n simofftst: Catched std::exception \n"
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| 325 | << (string)typeid(sex).name() << endl;
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| 326 | }
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| 327 | catch (...) {
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| 328 | cerr << "\n simofftst: some other exception was caught ! " << endl;
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| 329 | }
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| 330 |
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| 331 | return(0);
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| 332 | }
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