| 1 | /* Test de processeurs ds simtoipr.cc - Reza Avril 2001
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| 2 |
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| 3 | ---------------- Exemple d'appel ---------------------
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| 4 | csh> simtst -start 104385384 -end 104399964 -range -500,500 \
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| 5 | -intoi boloMuV_26 -wtoi 8192 -wdegli 1024 \
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| 6 | inputbolo.fits filt.fits xx.ppf
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| 7 | # Avec Filtre de Fourier
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| 8 | csh> simtst -start 104385384 -end 104399964 -range -500,500 \
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| 9 | -intoi boloMuV_26 -wtoi 8192 -wdegli 1024 \
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| 10 | -wfft 4096 -keepfft 5 -killfreq 15,4,2.5 \
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| 11 | inputbolo.fits filtfft.fits spectre.ppf
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| 12 | # Autre exemple b545k02
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| 13 | cool> ./simtst -start 104389122 -end 104649122 -range -1000.,1000. -intoi boloMu
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| 14 | V_23 -wtoi 8192 -wdegli 1024 -wfft 4096 -keepfft 5 -killfreq 15,4,2.5 Cmv/b545k02
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| 15 | 2_16.00_16.49.fits b545.fits b545.ppf
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| 16 |
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| 17 | */
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| 18 |
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| 19 |
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| 20 |
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| 21 | #include "machdefs.h"
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| 22 | #include <math.h>
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| 23 | #include "array.h"
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| 24 | #include <unistd.h>
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| 25 | #include <stdexcept>
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| 26 | #include "toi.h"
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| 27 | #include "toiprocessor.h"
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| 28 | #include "fitstoirdr.h"
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| 29 | #include "fitstoiwtr.h"
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| 30 | #include "toisqfilter.h"
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| 31 | #include "toimanager.h"
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| 32 | #include "simtoipr.h"
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| 33 | #include "nooppr.h"
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| 34 | #include "toiseqbuff.h"
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| 35 | #include "timing.h"
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| 36 | #include "sambainit.h"
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| 37 |
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| 38 | void Usage(bool fgerr)
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| 39 | {
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| 40 | cout << endl;
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| 41 | if (fgerr) {
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| 42 | cout << " simtst : Argument Error ! simtst -h for usage " << endl;
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| 43 | exit(1);
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| 44 | }
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| 45 | else {
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| 46 | cout << "\n Usage : simtst [-intoi toiname] [-start snb] [-end sne] \n"
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| 47 | << " [-dbg] [-wtoi sz] [-wdegli sz] [-range min,max] \n"
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| 48 | << " [-degli ns,ns2,mxpt,mnpt,wrec] [-gfilt wsz,sigma] \n"
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| 49 | << " [-wfft sz] [-keepfft n] [-killfreq bf,nharm,sigf] \n"
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| 50 | << " [-nooutflg] [-nowrtms] [-nowrticd] \n"
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| 51 | << " inFitsName outFitsName outPPFName \n"
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| 52 | << " -dbg : sets TOISeqBuffered debug level to 1 \n"
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| 53 | << " -start snb : sets the start sample num \n"
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| 54 | << " -end sne : sets the end sample num \n"
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| 55 | << " -range min,max : sets the acceptable range for intoi \n"
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| 56 | << " default= -16000,16000\n"
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| 57 | << " -intoi toiName : select input TOI name (def boloMuV_27)\n"
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| 58 | << " -wtoi sz : sets TOISeqBuff buffer size (def= 8192)\n"
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| 59 | << " -wdegli sz : sets deglitcher window size (def= 512) \n"
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| 60 | << " -degli ns,ns2,maxnpt,minnpt,wrec : sets deglitcher parameters\n"
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| 61 | << " -gfilt wsz,sigma : Gaussian filter window size and sigma\n"
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| 62 | << " -wfft sz : Activate Fourier filter and sets its width \n"
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| 63 | << " -keepfft n : Keeps n spectra (if Fourier filter activated) \n"
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| 64 | << " -killfreq bf,nharm,sigf : kills nharm frequency, basefreq=bf \n"
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| 65 | << " with a gaussian with width=sigf \n"
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| 66 | << " -nooutflg : Don't write flags to output FITS \n"
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| 67 | << " -nowrtms : Don't write mean/sigma TOI's \n"
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| 68 | << " -nowrticd : Don't write incopie,degli,deglioffset TOI's \n"
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| 69 | << endl;
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| 70 | }
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| 71 | }
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| 72 |
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| 73 | int main(int narg, char** arg) {
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| 74 |
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| 75 | if ((narg > 1) && (strcmp(arg[1],"-h") == 0) ) Usage(false);
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| 76 |
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| 77 | cout << "simtst starting - Decoding arguments " << " narg=" << narg << endl;
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| 78 |
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| 79 | bool fgdbg = false;
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| 80 | bool fgsetstart = false;
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| 81 | int wtoi = 8192;
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| 82 | int wdegli = 512;
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| 83 |
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| 84 | int wfft = 4096;
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| 85 | int keepfft = 0;
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| 86 | int nmax = 10;
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| 87 | int istart = 0;
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| 88 | int iend = 0;
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| 89 | double range_min = -16000;
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| 90 | double range_max = 16000.;
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| 91 |
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| 92 | // Deglitcher parameters
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| 93 | double degli_ns1 = 3.;
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| 94 | double degli_ns2 = 1.5;
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| 95 | int degli_minnpt = 2;
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| 96 | int degli_maxnpt = 4;
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| 97 | int degli_wrec = 10;
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| 98 |
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| 99 | // Gaussian filter parameters
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| 100 | int gfilt_wsz = 16;
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| 101 | double gfilt_sigma = 2.;
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| 102 |
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| 103 | // File names
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| 104 | string infile;
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| 105 | string outfile;
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| 106 | string outppfname;
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| 107 | string intoi = "boloMuV_27";
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| 108 |
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| 109 | bool fg_wrtflag = true;
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| 110 | bool fg_nowrtms = false;
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| 111 | bool fg_nowrticd = false;
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| 112 |
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| 113 |
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| 114 | bool fg_f_filt = false;
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| 115 | bool fg_killfreq = false;
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| 116 | int bf_killfreq = 1;
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| 117 | int nharm_killfreq = 1;
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| 118 | double sigf_killfreq = 1.;
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| 119 |
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| 120 | if (narg < 4) Usage(true);
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| 121 | int ko=1;
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| 122 | // decoding arguments
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| 123 | for(int ia=1; ia<narg; ia++) {
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| 124 | if (strcmp(arg[ia],"-start") == 0) {
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| 125 | if (ia == narg-1) Usage(true); // -start est suivi d'un argument
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| 126 | istart = atoi(arg[ia+1]); ia++;
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| 127 | fgsetstart = true;
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| 128 | }
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| 129 | else if (strcmp(arg[ia],"-end") == 0) {
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| 130 | if (ia == narg-1) Usage(true);
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| 131 | iend = atoi(arg[ia+1]); ia++;
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| 132 | }
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| 133 | else if (strcmp(arg[ia],"-wtoi") == 0) {
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| 134 | if (ia == narg-1) Usage(true);
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| 135 | wtoi = atoi(arg[ia+1]); ia++;
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| 136 | }
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| 137 | else if (strcmp(arg[ia],"-wdegli") == 0) {
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| 138 | if (ia == narg-1) Usage(true);
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| 139 | wdegli = atoi(arg[ia+1]); ia++;
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| 140 | }
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| 141 | else if (strcmp(arg[ia],"-degli") == 0) {
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| 142 | if (ia == narg-1) Usage(true);
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| 143 | sscanf(arg[ia+1],"%lf,%lf,%d,%d,%d", °li_ns1, °li_ns2,
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| 144 | °li_maxnpt, °li_minnpt, °li_wrec);
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| 145 | ia++;
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| 146 | }
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| 147 | else if (strcmp(arg[ia],"-gfilt") == 0) {
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| 148 | if (ia == narg-1) Usage(true);
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| 149 | sscanf(arg[ia+1],"%d,%lf", &gfilt_wsz, &gfilt_sigma);
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| 150 | ia++;
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| 151 | }
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| 152 | else if (strcmp(arg[ia],"-wfft") == 0) {
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| 153 | if (ia == narg-1) Usage(true);
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| 154 | wfft = atoi(arg[ia+1]); ia++;
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| 155 | fg_f_filt = true;
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| 156 | }
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| 157 | else if (strcmp(arg[ia],"-keepfft") == 0) {
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| 158 | if (ia == narg-1) Usage(true);
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| 159 | keepfft = atoi(arg[ia+1]); ia++;
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| 160 | }
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| 161 | else if (strcmp(arg[ia],"-killfreq") == 0) {
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| 162 | if (ia == narg-1) Usage(true);
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| 163 | sscanf(arg[ia+1],"%d,%d,%lf",&bf_killfreq, &nharm_killfreq, &sigf_killfreq);
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| 164 | fg_killfreq = true;
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| 165 | ia++;
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| 166 | }
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| 167 | else if (strcmp(arg[ia],"-range") == 0) {
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| 168 | if (ia == narg-1) Usage(true);
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| 169 | sscanf(arg[ia+1],"%lf,%lf",&range_min, &range_max);
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| 170 | ia++;
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| 171 | }
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| 172 | else if (strcmp(arg[ia],"-intoi") == 0) {
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| 173 | if (ia == narg-1) Usage(true);
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| 174 | intoi = arg[ia+1]; ia++;
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| 175 | }
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| 176 | else if (strcmp(arg[ia],"-dbg") == 0) fgdbg = true;
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| 177 | else if (strcmp(arg[ia],"-nooutflg") == 0) fg_wrtflag = false;
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| 178 | else if (strcmp(arg[ia],"-nowrtms") == 0) fg_nowrtms = true;
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| 179 | else if (strcmp(arg[ia],"-nowrticd") == 0) fg_nowrticd = true;
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| 180 |
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| 181 | else { ko = ia; break; } // Debut des noms
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| 182 | }
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| 183 |
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| 184 | if (iend < istart) iend = istart+wtoi*(nmax+5);
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| 185 | if ((narg-ko) < 3) Usage(true);
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| 186 | infile = arg[ko];
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| 187 | outfile = arg[ko+1];
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| 188 | outppfname = arg[ko+2];
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| 189 |
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| 190 | cout << " Initializing SOPHYA ... " << endl;
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| 191 | SophyaInit();
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| 192 | InitTim();
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| 193 |
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| 194 | cout << ">>>> simtst: Infile= " << infile << " outFile="
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| 195 | << outfile << endl;
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| 196 | cout << ">>>> Window Size WTOI= " << wtoi << " WDEGLI= " << wdegli
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| 197 | << " iStart= " << istart << " iEnd= " << iend << endl;
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| 198 | cout << ">>>> InTOIName= " << intoi << endl;
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| 199 |
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| 200 | try {
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| 201 | TOIManager* mgr = TOIManager::getManager();
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| 202 |
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| 203 | // mgr->setRequestedSample(11680920,11710584);
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| 204 | // mgr->setRequestedSample(104121000, 104946120);
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| 205 | if (fgsetstart)
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| 206 | mgr->setRequestedSample(istart, iend);
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| 207 |
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| 208 | // FITSTOIReader r("/data/Archeops/bolo11.fits);
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| 209 | FITSTOIReader r(infile);
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| 210 | cout << "reader created" << endl;
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| 211 | // FITSTOIWriter w("/data/Archeops/rz.fits");
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| 212 | FITSTOIWriter w(outfile);
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| 213 | cout << "fits writer created" << endl;
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| 214 |
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| 215 |
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| 216 | int w1 = wtoi;
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| 217 | int w2 = (fg_f_filt) ? wfft+3*w1 : w1;
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| 218 |
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| 219 | // char * colname[5] = {"MJD", "UTC","boloMuV_11","magnFlux","pivot"};
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| 220 | TOISeqBuffered * toiin = new TOISeqBuffered("f2in", w1);
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| 221 | if (fgdbg) toiin->setDebugLevel(1);
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| 222 | TOISeqBuffered * toidegli = new TOISeqBuffered("degli", w1);
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| 223 | if (fgdbg) toidegli->setDebugLevel(1);
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| 224 | TOISeqBuffered * toimean = new TOISeqBuffered("mean", w1);
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| 225 | if (fgdbg) toimean->setDebugLevel(1);
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| 226 | TOISeqBuffered * toisig = new TOISeqBuffered("sigma", w2);
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| 227 | if (fgdbg) toisig->setDebugLevel(1);
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| 228 | TOISeqBuffered * toiincopie = new TOISeqBuffered("incopie", w2);
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| 229 | if (fgdbg) toiincopie->setDebugLevel(1);
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| 230 |
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| 231 |
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| 232 |
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| 233 | // Connecting TOI to FITSTOIReader Processor
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| 234 | // for(kk=0; kk<5; kk++) {
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| 235 | // r.addOutput(colname[kk], toitab[kk]);
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| 236 | // }
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| 237 |
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| 238 | // int kk = 2;
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| 239 | r.addOutput(intoi, toiin);
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| 240 | // toi->dbg=true;
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| 241 | // r.addOutput("boloMuV_11", toi);
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| 242 | cout << " connecting in/out to RzTOIProcessor ... " << endl;
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| 243 |
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| 244 | // TOIProcessor * filt = NULL;
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| 245 |
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| 246 | cout << " Creating SimpleDeglitcher() " << endl;
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| 247 | SimpleDeglitcher degl(wdegli);
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| 248 | degl.SetDetectionParam(degli_ns1, degli_ns2, degli_maxnpt,
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| 249 | degli_minnpt, degli_wrec);
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| 250 |
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| 251 | cout << " Setting Range for deglitcher: " << range_min
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| 252 | << " - " << range_max << endl;
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| 253 |
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| 254 | degl.SetRange(range_min, range_max);
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| 255 | degl.addInput("in", toiin);
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| 256 | degl.addOutput("out", toidegli);
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| 257 | degl.addOutput("mean", toimean);
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| 258 | degl.addOutput("sigma", toisig);
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| 259 | degl.addOutput("incopie", toiincopie);
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| 260 |
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| 261 | cout << " Creating a FanOut SimpleFanOut Object " << endl;
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| 262 | SimpleFanOut fanout(2,2);
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| 263 | TOISeqBuffered * toidegli0 = new TOISeqBuffered("degli0", w1);
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| 264 | if (fgdbg) toidegli0->setDebugLevel(1);
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| 265 | TOISeqBuffered * toidegli1 = new TOISeqBuffered("degli1", w2);
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| 266 |
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| 267 | TOISeqBuffered * toimean0 = new TOISeqBuffered("mean0", w1);
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| 268 | if (fgdbg) toimean0->setDebugLevel(1);
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| 269 | TOISeqBuffered * toimean1 = new TOISeqBuffered("mean1", w2);
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| 270 | if (fgdbg) toimean1->setDebugLevel(1);
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| 271 |
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| 272 | fanout.addInput("in0", toidegli);
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| 273 | fanout.addOutput("out0_0", toidegli0);
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| 274 | fanout.addOutput("out0_1", toidegli1);
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| 275 | fanout.addInput("in1", toimean);
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| 276 | fanout.addOutput("out1_0", toimean0);
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| 277 | fanout.addOutput("out1_1", toimean1);
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| 278 |
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| 279 | cout << " Creating an Adder SimpleAdder Object " << endl;
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| 280 | SimpleAdder adder(2);
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| 281 | adder.addInput("in0", toidegli0);
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| 282 | adder.addInput("in1", toimean0);
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| 283 | adder.SetGain(0, 1.);
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| 284 | adder.SetGain(1, -1.);
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| 285 | TOISeqBuffered * toideglioff = new TOISeqBuffered("deglioff", w1);
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| 286 | if (fgdbg) toideglioff->setDebugLevel(1);
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| 287 | adder.addOutput("out", toideglioff);
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| 288 |
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| 289 | cout << " Creating a GaussianFilter SimpleFilter Object " << endl;
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| 290 | double G_sigma = 2.0;
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| 291 | double G_a = 1./(G_sigma*sqrt(M_PI*2.));
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| 292 | SimpleFilter filt(16, SimpleFilter::GaussFilter, G_a, G_sigma);
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| 293 |
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| 294 | filt.addInput("in", toideglioff);
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| 295 | TOISeqBuffered * toiout = new TOISeqBuffered("out", w1);
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| 296 | if (fgdbg) toiout->setDebugLevel(1);
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| 297 | TOISeqBuffered * toideglioffcopie = new TOISeqBuffered("deglioffcopie", w2);
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| 298 | if (fgdbg) toideglioffcopie->setDebugLevel(1);
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| 299 | filt.addOutput("out", toiout);
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| 300 | filt.addOutput("incopie", toideglioffcopie);
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| 301 |
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| 302 | Vector fcoef(wfft/2+1);
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| 303 | // fcoef = RegularSequence(1., -2./wfft);
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| 304 | fcoef = 1.;
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| 305 | for(int kfk=0; kfk<nharm_killfreq; kfk++) {
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| 306 | double cfreq = bf_killfreq*(kfk+1);
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| 307 | double xfreq = 0.;
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| 308 | for(int kfj=cfreq-3.*sigf_killfreq; kfj<= cfreq+3.*sigf_killfreq; kfj++) {
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| 309 | if ( (kfj < 0) || (kfj >= fcoef.Size() ) ) continue;
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| 310 | xfreq = (cfreq-kfj)/sigf_killfreq;
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| 311 | fcoef(kfj) -= exp(-xfreq*xfreq);
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| 312 | }
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| 313 | }
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| 314 | cout << " Creating Fourier Filter ... " << endl;
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| 315 | SimpleFourierFilter sfft(fcoef);
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| 316 | sfft.KeepSpectra(outppfname, keepfft);
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| 317 | sfft.ComputeMeanSpectra(true);
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| 318 | TOISeqBuffered * toifft = NULL;
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| 319 | TOISeqBuffered * toifiltcopie = NULL;
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| 320 |
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| 321 | if (fg_f_filt) {
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| 322 | cout << " Connecting Fourier Filter ... " << endl;
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| 323 | toifft = new TOISeqBuffered("fftout", w1);
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| 324 | toifiltcopie = new TOISeqBuffered("filtcopie", w1);
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| 325 | sfft.addInput("in",toiout);
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| 326 | sfft.addOutput("out", toifft);
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| 327 | sfft.addOutput("incopie", toifiltcopie);
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| 328 | }
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| 329 |
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| 330 | cout << " Connecting to output (FitsWriter) " << endl;
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| 331 |
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| 332 | w.setOutFlags(fg_wrtflag);
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| 333 |
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| 334 | // Pour connecter les lignes non connectees au FitsWriter
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| 335 | NoOpProcessor noop[3];
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| 336 |
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| 337 | if (fg_nowrticd) noop[0].addInput("in", toiincopie);
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| 338 | else w.addInput("in", toiincopie);
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| 339 |
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| 340 | if (fg_f_filt) {
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| 341 | w.addInput("filtout", toifiltcopie);
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| 342 | w.addInput("fftout", toifft);
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| 343 | }
|
|---|
| 344 | else w.addInput("filtout", toiout);
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| 345 |
|
|---|
| 346 | if (fg_nowrticd) {
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|---|
| 347 | noop[1].addInput("in", toidegli1);
|
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| 348 | noop[1].addInput("in2", toideglioffcopie);
|
|---|
| 349 | }
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|---|
| 350 | else {
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| 351 | w.addInput("degli", toidegli1);
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| 352 | w.addInput("deglioff", toideglioffcopie);
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| 353 | }
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|---|
| 354 | if (fg_nowrtms) {
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|---|
| 355 | noop[2].addInput("in", toimean1);
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|---|
| 356 | noop[2].addInput("in2", toisig);
|
|---|
| 357 | }
|
|---|
| 358 | else {
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|---|
| 359 | w.addInput("mean", toimean1);
|
|---|
| 360 | w.addInput("sigma", toisig);
|
|---|
| 361 | }
|
|---|
| 362 |
|
|---|
| 363 | cout << " ------ FITSReaderTOI::PrintStatus() : ----- " << endl;
|
|---|
| 364 | r.PrintStatus(cout);
|
|---|
| 365 | cout << " ------ FanOut::PrintStatus() : ----- " << endl;
|
|---|
| 366 | fanout.PrintStatus(cout);
|
|---|
| 367 | cout << " ------ Adder::PrintStatus() : ----- " << endl;
|
|---|
| 368 | adder.PrintStatus(cout);
|
|---|
| 369 | cout << " ------ Filter::PrintStatus() : ----- " << endl;
|
|---|
| 370 | filt.PrintStatus(cout);
|
|---|
| 371 | cout << "----- FITSWriterTOI::PrintStatus() : ----- " << endl;
|
|---|
| 372 | w.PrintStatus(cout);
|
|---|
| 373 |
|
|---|
| 374 | PrtTim("starting threads");
|
|---|
| 375 | r.start();
|
|---|
| 376 | degl.start();
|
|---|
| 377 | fanout.start();
|
|---|
| 378 | adder.start();
|
|---|
| 379 | filt.start();
|
|---|
| 380 | if (fg_f_filt) sfft.start();
|
|---|
| 381 | w.start();
|
|---|
| 382 | if (fg_nowrticd) {
|
|---|
| 383 | noop[0].start();
|
|---|
| 384 | noop[1].start();
|
|---|
| 385 | }
|
|---|
| 386 | if (fg_nowrtms)
|
|---|
| 387 | noop[2].start();
|
|---|
| 388 |
|
|---|
| 389 | /*
|
|---|
| 390 | for(int jj=0; jj<3; jj++) {
|
|---|
| 391 | cout << *toiin;
|
|---|
| 392 | cout << *toimean;
|
|---|
| 393 | cout << *toimean1;
|
|---|
| 394 | cout << *toiout;
|
|---|
| 395 | sleep(1);
|
|---|
| 396 | }
|
|---|
| 397 |
|
|---|
| 398 | */
|
|---|
| 399 |
|
|---|
| 400 | mgr->joinAll();
|
|---|
| 401 | PrtTim("End threads");
|
|---|
| 402 |
|
|---|
| 403 | // cout << " ------ FITSReaderTOI::PrintStatus() : ----- " << endl;
|
|---|
| 404 | // r.PrintStatus(cout);
|
|---|
| 405 | // cout << "----- FITSWriterTOI::PrintStatus() : ----- " << endl;
|
|---|
| 406 | // w.PrintStatus(cout);
|
|---|
| 407 |
|
|---|
| 408 | cout << " ------ toiin, toidegli and toiout Status information ------- " << endl;
|
|---|
| 409 | cout << *toiin;
|
|---|
| 410 | cout << *toidegli;
|
|---|
| 411 | cout << *toiout;
|
|---|
| 412 | if (fg_f_filt) {
|
|---|
| 413 | cout << *toisig;
|
|---|
| 414 | cout << *toimean1;
|
|---|
| 415 | }
|
|---|
| 416 | cout << degl;
|
|---|
| 417 | cout << filt;
|
|---|
| 418 | cout << adder;
|
|---|
| 419 | if (fg_f_filt) cout << sfft ;
|
|---|
| 420 |
|
|---|
| 421 | }
|
|---|
| 422 | catch (PThrowable & exc) {
|
|---|
| 423 | cerr << "\n simtst: Catched Exception \n" << (string)typeid(exc).name()
|
|---|
| 424 | << " - Msg= " << exc.Msg() << endl;
|
|---|
| 425 | }
|
|---|
| 426 | catch (const std::exception & sex) {
|
|---|
| 427 | cerr << "\n simtst: Catched std::exception \n"
|
|---|
| 428 | << (string)typeid(sex).name() << endl;
|
|---|
| 429 | }
|
|---|
| 430 | catch (...) {
|
|---|
| 431 | cerr << "\n simtst: some other exception was caught ! " << endl;
|
|---|
| 432 | }
|
|---|
| 433 |
|
|---|
| 434 | return(0);
|
|---|
| 435 | }
|
|---|
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