[3115] | 1 | #include "sopnamsp.h"
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| 2 | #include "machdefs.h"
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| 3 | #include <iostream>
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| 4 | #include <stdlib.h>
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| 5 | #include <stdio.h>
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| 6 | #include <string.h>
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| 7 | #include <math.h>
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| 8 | #include <unistd.h>
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| 9 | #include "timing.h"
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| 10 | #include "ntuple.h"
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| 11 | #include "matharr.h"
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| 12 |
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| 13 | #include "constcosmo.h"
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[3157] | 14 | #include "cosmocalc.h"
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[3115] | 15 | #include "schechter.h"
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| 16 | #include "geneutils.h"
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| 17 | #include "genefluct3d.h"
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| 18 |
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| 19 | void usage(void);
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| 20 | void usage(void)
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| 21 | {
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[3182] | 22 | cout<<"cmvobserv3d [...options...]"<<endl
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[3200] | 23 | <<" -a : auto init random seed (needed for multiple simul)"<<endl
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| 24 | <<" -0 : use ComputeFourier0 method (defaut: no, use normal way)"<<endl
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[3157] | 25 | <<" -G : compute Pk(z=0) and apply growth factor in real space"<<endl
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[3200] | 26 | <<" (default: no, spectrum Pk(z=z_median) for all cube)"<<endl
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| 27 | <<" -x nx,dx : size along x axis (npix,Mpc)"<<endl
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| 28 | <<" -y ny,dy : size along y axis (npix,Mpc)"<<endl
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| 29 | <<" if ny or dy <=0 take same value as for x"<<endl
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| 30 | <<" -z nz,dz : size along z axis (redshift axis, npix,Mpc)"<<endl
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| 31 | <<" -Z zref : redshift for the center of the simulation cube"<<endl
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| 32 | <<" -s snoise : gaussian noise sigma in equivalent Msol"<<endl
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| 33 | <<" -2 : compute also 2D spectrum (default: no)"<<endl
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[3193] | 34 | <<" -M schmin,schmax,nsch : min,max mass and nb points for schechter HI"<<endl
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[3200] | 35 | <<" -A <log10(S_agn in Jy at 1.4 GHz)>,sigma,powlaw :"<<endl
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| 36 | <<" AGN mean and sigma gaussian equiv. distrib. for solid angle of centeral pixel"<<endl
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| 37 | <<" powlaw: apply S_agn evolution as (Nu/1.4)^powlaw"<<endl
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| 38 | <<" -W : write cube in FITS format (complex cube is coded as real cube)"<<endl
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[3154] | 39 | <<" -P : write cube in PPF format"<<endl
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[3200] | 40 | <<" -V : compute variance from real space (for check, default: no)"<<endl
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| 41 | <<" -K : use power spectrum computation adapted for AGN (bidon!)"<<endl
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[3115] | 42 | <<endl;
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| 43 | }
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| 44 |
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| 45 | int main(int narg,char *arg[])
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| 46 | {
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| 47 | InitTim();
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| 48 |
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| 49 | //-----------------------------------------------------------------
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| 50 | // *** Survey definition
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[3129] | 51 | long nx=360, ny=-1, nz=64; double dx=1., dy=-1., dz=-1.;
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| 52 | //long nx=1000, ny=-1, nz=128; double dx=3., dy=-1., dz=6.;
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| 53 | //long nx=1200, ny=-1, nz=128; double dx=1., dy=-1., dz=3;
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[3115] | 54 |
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| 55 | // *** Cosmography definition (WMAP)
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[3157] | 56 | unsigned short flat = 0;
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[3115] | 57 | double ob0 = 0.0444356;
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| 58 | double h100=0.71, om0=0.267804, or0=7.9e-05, ol0=0.73,w0=-1.;
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| 59 | double zref = 0.5;
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[3157] | 60 | double perc=0.01,dzinc=-1.,dzmax=5.; unsigned short glorder=4;
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[3115] | 61 |
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| 62 | // *** Spectrum and variance definition
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| 63 | double ns = 1., as = 1.;
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| 64 | double R=8./h100, Rg=R/sqrt(5.);
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| 65 | double sigmaR = 1.;
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| 66 |
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| 67 | double kmin=1e-5,kmax=1000.;
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| 68 | int npt = 10000;
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| 69 | double lkmin=log10(kmin), lkmax=log10(kmax);
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| 70 | double eps=1.e-3;
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| 71 |
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| 72 | // *** Schechter mass function definition
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[3193] | 73 | double h75 = h100 / 0.75;
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| 74 | double nstar = 0.006*pow(h75,3.);
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[3115] | 75 | double mstar = pow(10.,9.8/(h75*h75)); // MSol
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| 76 | double alpha = -1.37;
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| 77 |
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| 78 | double schmin=1e8, schmax=1e12;
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| 79 | int schnpt = 1000;
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| 80 |
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| 81 | // *** Niveau de bruit
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| 82 | double snoise= 0.; // en equivalent MSol
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| 83 |
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[3196] | 84 | // *** AGN
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| 85 | bool do_agn = false;
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[3199] | 86 | double lfjy_agn=-99., lsigma_agn=0.; // en Jy
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| 87 | double powlaw_agn = 0.;
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| 88 | bool killkz = false;
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[3196] | 89 |
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[3115] | 90 | // *** type de generation
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| 91 | bool computefourier0=false;
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[3157] | 92 | bool use_growth_factor = false;
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[3115] | 93 | unsigned short nthread=4;
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| 94 |
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[3154] | 95 | // *** What to do
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| 96 | bool comp2dspec = false;
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| 97 | bool wfits = false;
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| 98 | bool wppf = false;
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| 99 | bool compvarreal = false;
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| 100 |
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[3115] | 101 | // --- Decodage arguments
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[3262] | 102 | if(narg>0) {
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| 103 | for(int i=0;i<narg;i++) cout<<arg[i]<<" ";
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| 104 | cout<<endl;
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| 105 | }
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[3115] | 106 |
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| 107 | char c;
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[3199] | 108 | while((c = getopt(narg,arg,"ha0PWV2GKx:y:z:s:Z:M:A:")) != -1) {
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[3115] | 109 | switch (c) {
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| 110 | case 'a' :
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| 111 | Auto_Ini_Ranf(5);
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| 112 | break;
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| 113 | case '0' :
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| 114 | computefourier0 = true;
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| 115 | break;
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[3157] | 116 | case 'G' :
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| 117 | use_growth_factor = true;
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| 118 | break;
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[3115] | 119 | case 'x' :
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[3129] | 120 | sscanf(optarg,"%ld,%lf",&nx,&dx);
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[3115] | 121 | break;
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| 122 | case 'y' :
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[3129] | 123 | sscanf(optarg,"%ld,%lf",&ny,&dy);
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[3115] | 124 | break;
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| 125 | case 'z' :
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[3129] | 126 | sscanf(optarg,"%ld,%lf",&nz,&dz);
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[3115] | 127 | break;
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| 128 | case 's' :
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| 129 | sscanf(optarg,"%lf",&snoise);
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| 130 | break;
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| 131 | case 'Z' :
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| 132 | sscanf(optarg,"%lf",&zref);
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| 133 | break;
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[3154] | 134 | case '2' :
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| 135 | comp2dspec = true;
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| 136 | break;
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[3193] | 137 | case 'M' :
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| 138 | sscanf(optarg,"%lf,%lf,%d",&schmin,&schmax,&schnpt);
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| 139 | break;
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[3196] | 140 | case 'A' :
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| 141 | do_agn = true;
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[3199] | 142 | sscanf(optarg,"%lf,%lf,%lf",&lfjy_agn,&lsigma_agn,&powlaw_agn);
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[3196] | 143 | break;
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[3199] | 144 | case 'K' :
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| 145 | killkz = true;
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| 146 | break;
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[3154] | 147 | case 'V' :
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| 148 | compvarreal = true;
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| 149 | break;
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| 150 | case 'W' :
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| 151 | wfits = true;
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| 152 | break;
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| 153 | case 'P' :
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| 154 | wppf = true;
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| 155 | break;
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[3115] | 156 | case 'h' :
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| 157 | default :
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| 158 | usage(); return -1;
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| 159 | }
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| 160 | }
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| 161 |
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[3193] | 162 | double lschmin=log10(schmin), lschmax=log10(schmax), dlsch=(lschmax-lschmin)/schnpt;
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| 163 |
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[3115] | 164 | string tagobs = "cmvobserv3d.ppf";
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| 165 | POutPersist posobs(tagobs);
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| 166 |
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| 167 | cout<<"zref="<<zref<<endl;
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| 168 | cout<<"nx="<<nx<<" dx="<<dx<<" ny="<<ny<<" dy="<<dy<<" nz="<<nz<<" dz="<<dz<<endl;
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| 169 | cout<<"kmin="<<kmin<<" ("<<lkmin<<"), kmax="<<kmax<<" ("<<lkmax<<") Mpc^-1"
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| 170 | <<", npt="<<npt<<endl;
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| 171 | cout<<"R="<<R<<" Rg="<<Rg<<" Mpc, sigmaR="<<sigmaR<<endl;
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[3246] | 172 | cout<<"nstar= "<<nstar<<" mstar="<<mstar<<" alpha="<<alpha<<endl;
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[3115] | 173 | cout<<"schmin="<<schmin<<" ("<<lschmin
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| 174 | <<"), schmax="<<schmax<<" ("<<lschmax<<") Msol"
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| 175 | <<", schnpt="<<schnpt<<endl;
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| 176 | cout<<"snoise="<<snoise<<" equivalent Msol"<<endl;
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[3199] | 177 | if(do_agn)
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| 178 | cout<<"AGN: <log10(Jy)>="<<lfjy_agn<<" , sigma="<<lsigma_agn
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| 179 | <<" , powlaw="<<powlaw_agn<<endl;
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[3115] | 180 |
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| 181 | //-----------------------------------------------------------------
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[3157] | 182 | cout<<endl<<"\n--- Create Cosmology"<<endl;
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[3115] | 183 |
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[3157] | 184 | CosmoCalc univ(flat,true,zref+1.);
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| 185 | univ.SetInteg(perc,dzinc,dzmax,glorder);
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| 186 | univ.SetDynParam(h100,om0,or0,ol0,w0);
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| 187 | univ.Print();
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| 188 | double loscomref = univ.Dloscom(zref);
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[3193] | 189 | cout<<"\nzref = "<<zref<<" -> dloscom = "<<loscomref<<" Mpc"<<endl;
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| 190 | univ.Print(zref);
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[3157] | 191 |
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| 192 | //-----------------------------------------------------------------
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[3193] | 193 | cout<<endl<<"\n--- Create Spectrum"<<endl;
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[3157] | 194 |
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[3115] | 195 | InitialSpectrum pkini(ns,as);
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| 196 |
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| 197 | TransfertEisenstein tf(h100,om0-ob0,ob0,T_CMB_Par,false);
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| 198 | //tf.SetNoOscEnv(2);
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| 199 |
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[3157] | 200 | GrowthFactor growth(om0,ol0);
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[3193] | 201 | // GrowthFactor growth(1.,0.); // D(z) = 1/(1+z)
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[3115] | 202 |
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| 203 | PkSpectrum0 pk0(pkini,tf);
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| 204 |
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[3157] | 205 | PkSpectrumZ pkz(pk0,growth,zref);
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[3115] | 206 |
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[3193] | 207 | //-----------------------------------------------------------------
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| 208 | cout<<endl<<"\n--- Create mass function"<<endl;
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| 209 |
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[3115] | 210 | Schechter sch(nstar,mstar,alpha);
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[3193] | 211 | sch.Print();
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[3115] | 212 |
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| 213 | //-----------------------------------------------------------------
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| 214 | pkz.SetZ(0.);
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| 215 | cout<<endl<<"\n--- Compute variance for top-hat R="<<R
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| 216 | <<" at z="<<pkz.GetZ()<<endl;
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| 217 | VarianceSpectrum varpk_th(pkz,0);
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| 218 | double kfind_th = varpk_th.FindMaximum(R,kmin,kmax,eps);
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| 219 | double pkmax_th = varpk_th(kfind_th);
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| 220 | cout<<"kfind_th = "<<kfind_th<<" ("<<log10(kfind_th)<<"), integrand="<<pkmax_th<<endl;
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| 221 | double k1=kmin, k2=kmax;
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| 222 | int rc = varpk_th.FindLimits(R,pkmax_th/1.e4,k1,k2,eps);
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| 223 | cout<<"limit_th: rc="<<rc<<" : "<<k1<<" ("<<log10(k1)<<") , "
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| 224 | <<k2<<" ("<<log10(k2)<<")"<<endl;
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| 225 |
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| 226 | double ldlk = (log10(k2)-log10(k1))/npt;
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| 227 | varpk_th.SetInteg(0.01,ldlk,-1.,4);
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| 228 | double sr2 = varpk_th.Variance(R,k1,k2);
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| 229 | cout<<"varpk_th="<<sr2<<" -> sigma="<<sqrt(sr2)<<endl;
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| 230 |
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| 231 | double normpkz = sigmaR*sigmaR/sr2;
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| 232 | pkz.SetScale(normpkz);
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| 233 | cout<<"Spectrum normalisation = "<<pkz.GetScale()<<endl;
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| 234 |
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| 235 | pkz.SetZ(zref);
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| 236 |
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[3120] | 237 | Histo hpkz(lkmin,lkmax,npt); hpkz.ReCenterBin();
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[3115] | 238 | FuncToHisto(pkz,hpkz,true);
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| 239 | {
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| 240 | tagobs = "hpkz"; posobs.PutObject(hpkz,tagobs);
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| 241 | }
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| 242 |
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| 243 | //-----------------------------------------------------------------
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| 244 | cout<<endl<<"\n--- Compute variance for Pk at z="<<pkz.GetZ()<<endl;
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| 245 | VarianceSpectrum varpk_int(pkz,2);
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| 246 |
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| 247 | double kfind_int = varpk_int.FindMaximum(R,kmin,kmax,eps);
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| 248 | double pkmax_int = varpk_int(kfind_int);
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| 249 | cout<<"kfind_int = "<<kfind_int<<" ("<<log10(kfind_int)<<"), integrand="<<pkmax_int<<endl;
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| 250 | double k1int=kmin, k2int=kmax;
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| 251 | int rcint = varpk_int.FindLimits(R,pkmax_int/1.e4,k1int,k2int,eps);
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| 252 | cout<<"limit_int: rc="<<rcint<<" : "<<k1int<<" ("<<log10(k1int)<<") , "
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| 253 | <<k2int<<" ("<<log10(k2int)<<")"<<endl;
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| 254 |
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| 255 | double ldlkint = (log10(k2int)-log10(k1int))/npt;
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| 256 | varpk_int.SetInteg(0.01,ldlkint,-1.,4);
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| 257 | double sr2int = varpk_int.Variance(R,k1int,k2int);
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| 258 | cout<<"varpk_int="<<sr2int<<" -> sigma="<<sqrt(sr2int)<<endl;
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| 259 |
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| 260 | //-----------------------------------------------------------------
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[3154] | 261 | cout<<endl<<"\n--- Compute galaxy density number"<<endl;
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[3115] | 262 |
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| 263 | sch.SetOutValue(0);
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| 264 | cout<<"sch(mstar) = "<<sch(mstar)<<" /Mpc^3/Msol"<<endl;
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| 265 | double ngal_by_mpc3 = IntegrateFuncLog(sch,lschmin,lschmax,0.01,dlsch,10.*dlsch,4);
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| 266 | cout<<"Galaxy density number = "<<ngal_by_mpc3<<" /Mpc^3 between limits"<<endl;
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| 267 |
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| 268 | sch.SetOutValue(1);
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| 269 | cout<<"mstar*sch(mstar) = "<<sch(mstar)<<" Msol/Mpc^3/Msol"<<endl;
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| 270 | double mass_by_mpc3 = IntegrateFuncLog(sch,lschmin,lschmax,0.01,dlsch,10.*dlsch,4);
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| 271 | cout<<"Galaxy mass density= "<<mass_by_mpc3<<" Msol/Mpc^3 between limits"<<endl;
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[3193] | 272 | cout<<"Omega_HI at z=0 is "<<mass_by_mpc3/(univ.Rhoc(0.)*GCm3toMsolMpc3_Cst)<<endl
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| 273 | <<" at z="<<zref<<" is "<<mass_by_mpc3/(univ.Rhoc(zref)*GCm3toMsolMpc3_Cst)<<endl;
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[3115] | 274 |
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[3155] | 275 | PrtTim(">>>> End of definition");
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| 276 |
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[3115] | 277 | //-----------------------------------------------------------------
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| 278 | // FFTW3 (p26): faster if sizes 2^a 3^b 5^c 7^d 11^e 13^f with e+f=0 ou 1
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[3155] | 279 | cout<<endl<<"\n--- Initialisation de GeneFluct3D"<<endl;
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[3115] | 280 |
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| 281 | TArray< complex<r_8> > pkgen;
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[3141] | 282 | GeneFluct3D fluct3d(pkgen);
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[3155] | 283 | fluct3d.SetPrtLevel(2);
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[3115] | 284 | fluct3d.SetNThread(nthread);
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| 285 | fluct3d.SetSize(nx,ny,nz,dx,dy,dz);
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[3157] | 286 | fluct3d.SetObservator(zref,nz/2.);
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| 287 | fluct3d.SetCosmology(univ);
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| 288 | fluct3d.SetGrowthFactor(growth);
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[3199] | 289 | fluct3d.LosComRedshift(0.001,-1);
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[3141] | 290 | TArray<r_8>& rgen = fluct3d.GetRealArray();
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[3157] | 291 | cout<<endl; fluct3d.Print();
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[3141] | 292 |
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| 293 | double dkmin = fluct3d.GetKincMin();
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[3115] | 294 | double knyqmax = fluct3d.GetKmax();
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[3141] | 295 | long nherr = long(knyqmax/dkmin+0.5);
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| 296 | cout<<"For HistoErr: d="<<dkmin<<" max="<<knyqmax<<" n="<<nherr<<endl;
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[3115] | 297 |
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[3141] | 298 | double dktmin = fluct3d.GetKTincMin();
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| 299 | double ktnyqmax = fluct3d.GetKTmax();
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| 300 | long nherrt = long(ktnyqmax/dktmin+0.5);
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| 301 | double dkzmin = fluct3d.GetKinc()[2];
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| 302 | double kznyqmax = fluct3d.GetKnyq()[2];
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| 303 | long nherrz = long(kznyqmax/dkzmin+0.5);
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| 304 | cout<<"For Histo2DErr: d="<<dktmin<<","<<dkzmin
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| 305 | <<" max="<<ktnyqmax<<","<<kznyqmax<<" n="<<nherrt<<","<<nherrz<<endl;
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| 306 |
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[3157] | 307 | //-----------------------------------------------------------------
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[3115] | 308 | cout<<"\n--- Computing spectra variance up to Kmax at z="<<pkz.GetZ()<<endl;
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| 309 | // En fait on travaille sur un cube inscrit dans la sphere de rayon kmax:
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| 310 | // sphere: Vs = 4Pi/3 k^3 , cube inscrit (cote k*sqrt(2)): Vc = (k*sqrt(2))^3
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| 311 | // Vc/Vs = 0.675 -> keff = kmax * (0.675)^(1/3) = kmax * 0.877
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[3141] | 312 | double knyqmax_mod = 0.877*knyqmax;
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| 313 | ldlkint = (log10(knyqmax_mod)-log10(k1int))/npt;
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[3115] | 314 | varpk_int.SetInteg(0.01,ldlkint,-1.,4);
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[3141] | 315 | double sr2int_kmax = varpk_int.Variance(R,k1int,knyqmax_mod);
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| 316 | cout<<"varpk_int(<"<<knyqmax_mod<<")="<<sr2int_kmax<<" -> sigma="<<sqrt(sr2int_kmax)<<endl;
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[3115] | 317 |
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[3155] | 318 | PrtTim(">>>> End Initialisation de GeneFluct3D");
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| 319 |
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[3157] | 320 | //-----------------------------------------------------------------
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[3115] | 321 | cout<<"\n--- Computing a realization in Fourier space"<<endl;
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[3157] | 322 | if(use_growth_factor) pkz.SetZ(0.); else pkz.SetZ(zref);
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| 323 | cout<<"Power spectrum set at redshift: "<<pkz.GetZ()<<endl;
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[3141] | 324 | if(computefourier0) fluct3d.ComputeFourier0(pkz);
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| 325 | else fluct3d.ComputeFourier(pkz);
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[3155] | 326 | PrtTim(">>>> End Computing a realization in Fourier space");
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[3115] | 327 |
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[3141] | 328 | if(1) {
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| 329 | cout<<"\n--- Checking realization spectra"<<endl;
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| 330 | HistoErr hpkgen(0.,knyqmax,nherr);
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| 331 | hpkgen.ReCenterBin(); hpkgen.Zero();
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| 332 | hpkgen.Show();
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| 333 | fluct3d.ComputeSpectrum(hpkgen);
|
---|
| 334 | {
|
---|
| 335 | tagobs = "hpkgen"; posobs.PutObject(hpkgen,tagobs);
|
---|
| 336 | }
|
---|
[3155] | 337 | PrtTim(">>>> End Checking realization spectra");
|
---|
[3115] | 338 | }
|
---|
| 339 |
|
---|
[3154] | 340 | if(comp2dspec) {
|
---|
[3141] | 341 | cout<<"\n--- Checking realization 2D spectra"<<endl;
|
---|
| 342 | Histo2DErr hpkgen2(0.,ktnyqmax,nherrt,0.,kznyqmax,nherrz);
|
---|
| 343 | hpkgen2.ReCenterBin(); hpkgen2.Zero();
|
---|
| 344 | hpkgen2.Show();
|
---|
| 345 | fluct3d.ComputeSpectrum2D(hpkgen2);
|
---|
| 346 | {
|
---|
| 347 | tagobs = "hpkgen2"; posobs.PutObject(hpkgen2,tagobs);
|
---|
| 348 | }
|
---|
[3155] | 349 | PrtTim(">>>> End Checking realization 2D spectra");
|
---|
[3141] | 350 | }
|
---|
| 351 |
|
---|
| 352 | if(1) {
|
---|
[3115] | 353 | cout<<"\n--- Computing convolution by pixel shape"<<endl;
|
---|
| 354 | fluct3d.FilterByPixel();
|
---|
[3155] | 355 | PrtTim(">>>> End Computing convolution by pixel shape");
|
---|
[3141] | 356 | }
|
---|
[3115] | 357 |
|
---|
[3155] | 358 | if(wfits) {
|
---|
| 359 | fluct3d.WriteFits("!cmvobserv3d_k0.fits");
|
---|
| 360 | PrtTim(">>>> End WriteFits");
|
---|
| 361 | }
|
---|
| 362 | if(wppf) {
|
---|
| 363 | fluct3d.WritePPF("cmvobserv3d_k0.ppf",false);
|
---|
| 364 | PrtTim(">>>> End WritePPF");
|
---|
| 365 | }
|
---|
[3141] | 366 |
|
---|
| 367 | if(1) {
|
---|
[3115] | 368 | cout<<"\n--- Checking realization spectra after pixel shape convol."<<endl;
|
---|
[3141] | 369 | HistoErr hpkgenf(0.,knyqmax,nherr);
|
---|
| 370 | hpkgenf.ReCenterBin(); hpkgenf.Zero();
|
---|
| 371 | hpkgenf.Show();
|
---|
[3115] | 372 | fluct3d.ComputeSpectrum(hpkgenf);
|
---|
| 373 | {
|
---|
| 374 | tagobs = "hpkgenf"; posobs.PutObject(hpkgenf,tagobs);
|
---|
| 375 | }
|
---|
[3155] | 376 | PrtTim(">>>> End Checking realization spectra");
|
---|
[3115] | 377 | }
|
---|
| 378 |
|
---|
[3154] | 379 | if(comp2dspec) {
|
---|
[3141] | 380 | cout<<"\n--- Checking realization 2D spectra after pixel shape convol."<<endl;
|
---|
| 381 | Histo2DErr hpkgenf2(0.,ktnyqmax,nherrt,0.,kznyqmax,nherrz);
|
---|
| 382 | hpkgenf2.ReCenterBin(); hpkgenf2.Zero();
|
---|
| 383 | hpkgenf2.Show();
|
---|
| 384 | fluct3d.ComputeSpectrum2D(hpkgenf2);
|
---|
| 385 | {
|
---|
| 386 | tagobs = "hpkgenf2"; posobs.PutObject(hpkgenf2,tagobs);
|
---|
| 387 | }
|
---|
[3155] | 388 | PrtTim(">>>> End Checking realization 2D spectra");
|
---|
[3115] | 389 | }
|
---|
| 390 |
|
---|
[3157] | 391 | //-----------------------------------------------------------------
|
---|
[3115] | 392 | cout<<"\n--- Computing a realization in real space"<<endl;
|
---|
| 393 | fluct3d.ComputeReal();
|
---|
| 394 | double rmin,rmax; rgen.MinMax(rmin,rmax);
|
---|
| 395 | cout<<"rgen.Min = "<<rmin<<" , Max="<<rmax<<endl;
|
---|
[3157] | 396 | PrtTim(">>>> End Computing a realization in real space");
|
---|
[3115] | 397 |
|
---|
[3157] | 398 | if(use_growth_factor) {
|
---|
| 399 | cout<<"\n--- Apply Growth factor"<<endl;
|
---|
| 400 | cout<<"...D(z=0)="<<growth(0.)<<" D(z="<<zref<<")="<<growth(zref)<<endl;
|
---|
[3199] | 401 | fluct3d.ApplyGrowthFactor();
|
---|
[3252] | 402 | rgen.MinMax(rmin,rmax);
|
---|
[3157] | 403 | cout<<"rgen.Min = "<<rmin<<" , Max="<<rmax<<endl;
|
---|
| 404 | PrtTim(">>>> End Applying growth factor");
|
---|
| 405 | }
|
---|
| 406 |
|
---|
[3155] | 407 | if(wfits) {
|
---|
| 408 | fluct3d.WriteFits("!cmvobserv3d_r0.fits");
|
---|
| 409 | PrtTim(">>>> End WriteFits");
|
---|
| 410 | }
|
---|
| 411 | if(wppf) {
|
---|
| 412 | fluct3d.WritePPF("cmvobserv3d_r0.ppf",true);
|
---|
| 413 | PrtTim(">>>> End WritePPF");
|
---|
| 414 | }
|
---|
[3115] | 415 |
|
---|
[3141] | 416 | int_8 nm;
|
---|
| 417 | double rm,rs2;
|
---|
[3115] | 418 | if(1) {
|
---|
[3141] | 419 | cout<<"\n--- Check mean and variance in real space"<<endl;
|
---|
[3262] | 420 | fluct3d.NumberOfBad(-1.,1e+200);
|
---|
[3141] | 421 | nm = fluct3d.MeanSigma2(rm,rs2);
|
---|
[3155] | 422 | PrtTim(">>>> End Check mean and variance in real space");
|
---|
[3141] | 423 | }
|
---|
| 424 |
|
---|
[3154] | 425 | if(compvarreal) {
|
---|
[3115] | 426 | cout<<"\n--- Check variance sigmaR in real space"<<endl;
|
---|
| 427 | double varr;
|
---|
[3262] | 428 | fluct3d.VarianceFrReal(R,varr);
|
---|
[3155] | 429 | PrtTim(">>>> End Check variance sigmaR in real space");
|
---|
[3115] | 430 | }
|
---|
| 431 |
|
---|
| 432 | //-----------------------------------------------------------------
|
---|
| 433 | cout<<endl<<"\n--- Converting fluctuations into mass"<<endl;
|
---|
| 434 | fluct3d.TurnFluct2Mass();
|
---|
[3262] | 435 | nm = fluct3d.MeanSigma2(rm,rs2);
|
---|
[3155] | 436 | PrtTim(">>>> End Converting fluctuations into mass");
|
---|
[3115] | 437 |
|
---|
| 438 | cout<<"\n--- Converting mass into galaxy number"<<endl;
|
---|
| 439 | rm = fluct3d.TurnMass2MeanNumber(ngal_by_mpc3);
|
---|
[3262] | 440 | nm = fluct3d.MeanSigma2(rm,rs2,0.,1e200);
|
---|
| 441 | nm = fluct3d.MeanSigma2(rm,rs2,0.,1e200,true,0.);
|
---|
| 442 | PrtTim(">>>> End Converting mass into galaxy number");
|
---|
[3115] | 443 |
|
---|
[3261] | 444 | cout<<"\n--- Set negative and null pixels to BAD"<<endl;
|
---|
[3115] | 445 | nm = fluct3d.SetToVal(0.,1e+200,-999.);
|
---|
[3155] | 446 | PrtTim(">>>> End Set negative pixels to BAD etc...");
|
---|
[3115] | 447 |
|
---|
[3154] | 448 | cout<<"\n--- Apply poisson on galaxy number"<<endl;
|
---|
[3262] | 449 | fluct3d.ApplyPoisson();
|
---|
| 450 | nm = fluct3d.MeanSigma2(rm,rs2,-998.,1e200);
|
---|
| 451 | nm = fluct3d.MeanSigma2(rm,rs2,0.,1e200,true,0.);
|
---|
[3155] | 452 | PrtTim(">>>> End Apply poisson on galaxy number");
|
---|
[3115] | 453 |
|
---|
[3154] | 454 | cout<<"\n--- Convert Galaxy number to HI mass"<<endl;
|
---|
[3129] | 455 | long nhmdndm = long( (lschmax-lschmin+1.)*100. + 0.5);
|
---|
[3115] | 456 | Histo hmdndm(lschmin,lschmax,nhmdndm);
|
---|
| 457 | sch.SetOutValue(1);
|
---|
| 458 | FuncToHisto(sch,hmdndm,true);
|
---|
| 459 | FunRan tirhmdndm(hmdndm,true);
|
---|
| 460 | {
|
---|
| 461 | tagobs = "hmdndm"; posobs.PutObject(hmdndm,tagobs);
|
---|
| 462 | Histo hdum1(tirhmdndm);
|
---|
| 463 | tagobs = "tirhmdndm"; posobs.PutObject(hdum1,tagobs);
|
---|
| 464 | }
|
---|
| 465 | double mhi = fluct3d.TurnNGal2Mass(tirhmdndm,true);
|
---|
| 466 | cout<<mhi<<" MSol in survey / "<<mass_by_mpc3*fluct3d.GetVol()<<endl;
|
---|
[3262] | 467 | nm = fluct3d.MeanSigma2(rm,rs2,-998.,1e200);
|
---|
| 468 | cout<<"Equivalent: "<<rm*nm/fluct3d.NPix()<<" Msol / pixels"<<endl;
|
---|
| 469 | nm = fluct3d.MeanSigma2(rm,rs2,0.,1e200,true,0.);
|
---|
[3155] | 470 | PrtTim(">>>> End Convert Galaxy number to HI mass");
|
---|
[3115] | 471 |
|
---|
| 472 | cout<<"\n--- Set BAD pixels to Zero"<<endl;
|
---|
| 473 | nm = fluct3d.SetToVal(-998.,1e+200,0.);
|
---|
[3155] | 474 | PrtTim(">>>> End Set BAD pixels to Zero etc...");
|
---|
[3115] | 475 |
|
---|
[3155] | 476 | if(wfits) {
|
---|
| 477 | fluct3d.WriteFits("!cmvobserv3d_r.fits");
|
---|
| 478 | PrtTim(">>>> End WriteFits");
|
---|
| 479 | }
|
---|
| 480 | if(wppf) {
|
---|
| 481 | fluct3d.WritePPF("cmvobserv3d_r.ppf",true);
|
---|
| 482 | PrtTim(">>>> End WritePPF");
|
---|
| 483 | }
|
---|
[3120] | 484 |
|
---|
[3196] | 485 | if(do_agn) {
|
---|
[3199] | 486 | cout<<"\n--- Add AGN: <log10(S Jy)>="<<lfjy_agn<<" , sigma="<<lsigma_agn
|
---|
| 487 | <<" , powlaw="<<powlaw_agn<<endl;
|
---|
| 488 | fluct3d.AddAGN(lfjy_agn,lsigma_agn,powlaw_agn);
|
---|
[3262] | 489 | nm = fluct3d.MeanSigma2(rm,rs2);
|
---|
[3196] | 490 | PrtTim(">>>> End Add AGN");
|
---|
| 491 | }
|
---|
| 492 |
|
---|
[3193] | 493 | if(snoise>0.) {
|
---|
| 494 | cout<<"\n--- Add noise to HI Flux snoise="<<snoise<<endl;
|
---|
| 495 | fluct3d.AddNoise2Real(snoise);
|
---|
[3262] | 496 | nm = fluct3d.MeanSigma2(rm,rs2);
|
---|
[3193] | 497 | PrtTim(">>>> End Add noise");
|
---|
| 498 | }
|
---|
[3115] | 499 |
|
---|
[3199] | 500 | if(wfits) {
|
---|
| 501 | fluct3d.WriteFits("!cmvobserv3d_rf.fits");
|
---|
| 502 | PrtTim(">>>> End WriteFits");
|
---|
| 503 | }
|
---|
| 504 | if(wppf) {
|
---|
| 505 | fluct3d.WritePPF("cmvobserv3d_rf.ppf",true);
|
---|
| 506 | PrtTim(">>>> End WritePPF");
|
---|
| 507 | }
|
---|
| 508 |
|
---|
[3115] | 509 | //-----------------------------------------------------------------
|
---|
| 510 | // -- NE PAS FAIRE CA SI ON VEUT CONTINUER LA SIMULATION -> d_rho/rho ecrase
|
---|
[3141] | 511 |
|
---|
[3115] | 512 | if(1) {
|
---|
| 513 | cout<<endl<<"\n--- ReComputing spectrum from real space"<<endl;
|
---|
| 514 | fluct3d.ReComputeFourier();
|
---|
[3155] | 515 | PrtTim(">>>> End ReComputing spectrum");
|
---|
[3141] | 516 | }
|
---|
| 517 |
|
---|
[3155] | 518 | if(wfits) {
|
---|
| 519 | fluct3d.WriteFits("!cmvobserv3d_k.fits");
|
---|
| 520 | PrtTim(">>>> End WriteFits");
|
---|
| 521 | }
|
---|
| 522 | if(wppf) {
|
---|
| 523 | fluct3d.WritePPF("cmvobserv3d_k.ppf",false);
|
---|
| 524 | PrtTim(">>>> End WritePPF");
|
---|
| 525 | }
|
---|
[3154] | 526 |
|
---|
[3141] | 527 | if(1) {
|
---|
| 528 | cout<<endl<<"\n--- Computing final spectrum"<<endl;
|
---|
| 529 | HistoErr hpkrec(0.,knyqmax,nherr);
|
---|
[3115] | 530 | hpkrec.ReCenterBin();
|
---|
[3141] | 531 | hpkrec.Show();
|
---|
[3199] | 532 | if(killkz) fluct3d.ComputeSpectrum_bricolo(hpkrec);
|
---|
| 533 | else fluct3d.ComputeSpectrum(hpkrec);
|
---|
[3115] | 534 | tagobs = "hpkrec"; posobs.PutObject(hpkrec,tagobs);
|
---|
[3155] | 535 | PrtTim(">>>> End Computing final spectrum");
|
---|
[3115] | 536 | }
|
---|
| 537 |
|
---|
[3154] | 538 | if(comp2dspec) {
|
---|
[3141] | 539 | cout<<"\n--- Computing final 2D spectrum"<<endl;
|
---|
| 540 | Histo2DErr hpkrec2(0.,ktnyqmax,nherrt,0.,kznyqmax,nherrz);
|
---|
| 541 | hpkrec2.ReCenterBin(); hpkrec2.Zero();
|
---|
| 542 | hpkrec2.Show();
|
---|
[3199] | 543 | if(killkz) fluct3d.ComputeSpectrum2D_bricolo(hpkrec2);
|
---|
| 544 | else fluct3d.ComputeSpectrum2D(hpkrec2);
|
---|
[3141] | 545 | {
|
---|
| 546 | tagobs = "hpkrec2"; posobs.PutObject(hpkrec2,tagobs);
|
---|
| 547 | }
|
---|
[3155] | 548 | PrtTim(">>>> End Computing final 2D spectrum");
|
---|
[3141] | 549 | }
|
---|
| 550 |
|
---|
[3155] | 551 | PrtTim(">>>> End Of Job");
|
---|
[3115] | 552 | return 0;
|
---|
| 553 | }
|
---|
| 554 |
|
---|
| 555 | /*
|
---|
[3141] | 556 | ######################################################
|
---|
[3154] | 557 | readfits cmvobserv3d_k0.fits
|
---|
[3141] | 558 | readfits cmvobserv3d_k.fits
|
---|
| 559 | readfits cmvobserv3d_r0.fits
|
---|
| 560 | readfits cmvobserv3d_r.fits
|
---|
[3199] | 561 | readfits cmvobserv3d_rf.fits
|
---|
[3141] | 562 |
|
---|
[3154] | 563 | openppf cmvobserv3d_k0.ppf
|
---|
[3141] | 564 | openppf cmvobserv3d_k.ppf
|
---|
| 565 | openppf cmvobserv3d_r0.ppf
|
---|
| 566 | openppf cmvobserv3d_r.ppf
|
---|
[3199] | 567 | openppf cmvobserv3d_rf.ppf
|
---|
[3141] | 568 |
|
---|
[3199] | 569 | # pour le plot 2D d'une slice en Z du 3D: xy2d nom_obj3D num_slice
|
---|
| 570 | defscript xy2d
|
---|
[3141] | 571 | objaoper $1 sliceyz $2
|
---|
[3199] | 572 | mv sliceyz_${2} ${1}_Z_$2
|
---|
| 573 | disp ${1}_Z_$2
|
---|
| 574 | echo display slice $2 of $1 name is ${1}_Z_$2
|
---|
| 575 | endscript
|
---|
| 576 |
|
---|
| 577 | # pour le plot 2D d'une slice en Y du 3D: xz2d nom_obj3D num_slice
|
---|
| 578 | defscript xz2d
|
---|
| 579 | objaoper $1 slicexy $2
|
---|
| 580 | mv slicexy_${2} ${1}_Y_$2
|
---|
| 581 | disp ${1}_Y_$2
|
---|
| 582 | echo display slice $2 of $1 name is ${1}_Y_$2
|
---|
[3141] | 583 | endscript
|
---|
[3199] | 584 |
|
---|
| 585 | # pour le plot 2D d'une slice en X du 3D: yz2d nom_obj3D num_slice
|
---|
| 586 | defscript yz2d
|
---|
| 587 | objaoper $1 slicexz $2
|
---|
| 588 | mv slicexz_${2} ${1}_X_$2
|
---|
| 589 | disp ${1}_X_$2
|
---|
| 590 | echo display slice $2 of $1 name is ${1}_X_$2
|
---|
| 591 | endscript
|
---|
[3141] | 592 |
|
---|
[3199] | 593 | xy2d $cobj 0
|
---|
| 594 | xz2d $cobj 0
|
---|
| 595 | yz2d $cobj 0
|
---|
[3141] | 596 |
|
---|
| 597 | ######################################################
|
---|
[3115] | 598 | openppf cmvobserv3d.ppf
|
---|
| 599 |
|
---|
[3141] | 600 | zone
|
---|
[3150] | 601 | set k pow(10.,x)
|
---|
| 602 | n/plot hpkz.val*$k*$k/(2*M_PI*M_PI)%x ! "connectpoints"
|
---|
| 603 |
|
---|
[3199] | 604 | echo ${hpkgen.sum}
|
---|
| 605 | echo ${hpkgenf.sum}
|
---|
| 606 | echo ${hpkrec.sum}
|
---|
| 607 |
|
---|
[3150] | 608 | zone
|
---|
[3120] | 609 | n/plot hpkz.val%x ! ! "nsta connectpoints"
|
---|
| 610 | n/plot hpkgen.val%log10(x) x>0 ! "nsta same red connectpoints"
|
---|
| 611 | n/plot hpkgenf.val%log10(x) x>0 ! "nsta same orange connectpoints"
|
---|
| 612 | n/plot hpkrec.val%log10(x) x>0 ! "nsta same blue connectpoints"
|
---|
[3115] | 613 |
|
---|
[3150] | 614 | disp hpkgen "hbincont err"
|
---|
| 615 | disp hpkgenf "hbincont err"
|
---|
| 616 | disp hpkrec "hbincont err"
|
---|
[3115] | 617 |
|
---|
[3141] | 618 | zone 2 2
|
---|
| 619 | imag hpkgen2
|
---|
| 620 | imag hpkgenf2
|
---|
| 621 | imag hpkrec2
|
---|
[3115] | 622 |
|
---|
[3150] | 623 | zone 2 1
|
---|
| 624 | disp hmdndm "nsta"
|
---|
| 625 | disp tirhmdndm "nsta"
|
---|
[3120] | 626 | addline 0 1 20 1 "red"
|
---|
| 627 |
|
---|
[3115] | 628 | */
|
---|