[3493] | 1 | /*
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| 2 | --- SOPHYA software - FitsIOServer module ---
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| 3 | C. Magneville, 2001
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| 4 | (C) UPS+LAL IN2P3/CNRS (C) DAPNIA-SPP/CEA
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| 5 | */
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[1654] | 6 | /* Interface Fits BINARY/ASCII Table Column Reader cmv 26/09/2001 */
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| 7 | #ifndef FABTCOLREAD_H_SEEN
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| 8 | #define FABTCOLREAD_H_SEEN
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| 9 |
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| 10 | #include "machdefs.h"
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[2322] | 11 | #include <iostream>
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[1654] | 12 | #include <string.h>
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| 13 | #include <string>
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| 14 |
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| 15 | #include "anydataobj.h"
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| 16 | #include "tvector.h"
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| 17 | #include "FitsIO/fitsio.h"
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| 18 |
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| 19 | namespace SOPHYA {
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| 20 |
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[2449] | 21 | ///////////////////////////////////////////////////////////////////
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| 22 | //! Class for opening a FITS file for reading
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| 23 | class FitsOpenFile : public AnyDataObj {
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| 24 | public:
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| 25 | FitsOpenFile(string fname);
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| 26 | FitsOpenFile(const char *cfname);
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| 27 | FitsOpenFile();
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| 28 | FitsOpenFile(FitsOpenFile& fof);
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| 29 | virtual ~FitsOpenFile();
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| 30 |
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[2456] | 31 | inline string FileName() const {return FitsFN;}
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| 32 | //! Get the number of the HDU read
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| 33 | inline int HDU(void) const {return IHdu;}
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| 34 | //! Get the number of the HDU type
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| 35 | inline int HDUType(void) const {return HduType;}
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| 36 | //! Get the number of HDU in file
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| 37 | inline int NHDU() const {return NHdu;}
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| 38 | //! Get the CFISTIO fits file pointer
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| 39 | inline fitsfile* GetFitsPtr() const {return FitsPtr;}
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| 40 | //! Set the positionning status of the file
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| 41 | inline void SetPosStatus(bool sta=true) {HasBeenPos = sta;}
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| 42 | //! Get the positionning status of the file
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| 43 | inline bool GetPosStatus(void) const {return HasBeenPos;}
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[2449] | 44 |
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[2456] | 45 | int MoveToHDU(int ihdu);
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| 46 | int MoveToFirst(int hdutype,int ihdudeb=1);
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| 47 | int MoveToLast(int hdutype,int ihdudeb=1);
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| 48 | void Print(void);
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| 49 |
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[3128] | 50 | static double ReadKey(fitsfile *fitsptr,char *keyname);
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| 51 | static long ReadKeyL(fitsfile *fitsptr,char *keyname);
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| 52 | static LONGLONG ReadKeyLL(fitsfile *fitsptr,char *keyname);
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| 53 | static string ReadKeyS(fitsfile *fitsptr,char *keyname);
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[2453] | 54 | static void printerror(int sta);
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| 55 |
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[2449] | 56 | protected:
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| 57 | void Init(const char *cfname);
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| 58 | void Delete(void);
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| 59 |
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| 60 | string FitsFN;
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[2456] | 61 | int NHdu, IHdu, HduType;
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[2449] | 62 | fitsfile *FitsPtr;
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[2456] | 63 | bool HasBeenPos;
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[2449] | 64 | };
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| 65 |
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| 66 | ///////////////////////////////////////////////////////////////////
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[1654] | 67 | //! Class for reading a column in a FITS ASCII or BINARY table
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[2449] | 68 | class FitsABTColRd : public AnyDataObj {
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[1654] | 69 | public:
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[2449] | 70 | FitsABTColRd(FitsOpenFile* fof,string collabel,int ihdu=0
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| 71 | ,long blen=100,long bsens=1,int lp=0);
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| 72 | FitsABTColRd(FitsOpenFile* fof,int colnum,int ihdu=0
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| 73 | ,long blen=100,long bsens=1,int lp=0);
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| 74 | FitsABTColRd(FitsABTColRd& fbt);
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| 75 | FitsABTColRd();
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| 76 | virtual ~FitsABTColRd();
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[1654] | 77 |
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| 78 | void ChangeBuffer(long blen=100,long bsens=1);
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| 79 |
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[3128] | 80 | double ReadKey(char *keyname);
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| 81 | long ReadKeyL(char *keyname);
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| 82 | LONGLONG ReadKeyLL(char *keyname);
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| 83 | string ReadKeyS(char *keyname);
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[1814] | 84 |
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[3128] | 85 | double Read(LONGLONG n,bool usebuffer=true);
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[2170] | 86 |
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[3128] | 87 | LONGLONG Read(LONGLONG n1,LONGLONG n2,TVector<uint_2>& data);
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| 88 | LONGLONG Read(LONGLONG n1,LONGLONG n2,TVector<int_4>& data);
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| 89 | LONGLONG Read(LONGLONG n1,LONGLONG n2,TVector<int_8>& data);
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| 90 | LONGLONG Read(LONGLONG n1,LONGLONG n2,TVector<float>& data);
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| 91 | LONGLONG Read(LONGLONG n1,LONGLONG n2,TVector<double>& data);
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[1654] | 92 |
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[1659] | 93 | //! return the value of the first row
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| 94 | double ReadFirstRow(bool usebuffer=false)
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| 95 | {return Read(0,usebuffer);}
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| 96 | //! return the value of the last row
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| 97 | double ReadLastRow(bool usebuffer=false)
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| 98 | {return Read(NBline-1,usebuffer);}
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| 99 |
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[3128] | 100 | LONGLONG FirstRow(double val1,double val2,LONGLONG rowstart=-1);
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| 101 | LONGLONG LastRow(double val1,double val2,LONGLONG rowstart=-1);
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[1659] | 102 |
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[1654] | 103 | //! Set debug level
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[2456] | 104 | inline void SetDebug(int lp=0) {DbgLevel = (unsigned short) lp;}
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[1654] | 105 | //! Set null value to be return when reading null data (0=return the data)
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[2456] | 106 | inline void SetNulVal(double nulval=0.) {NulVal = nulval;}
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[1654] | 107 | //! Get the FITS file name
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[2456] | 108 | inline string FileName(void) const
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| 109 | {if(FitsOF) return FitsOF->FileName(); else return (string)"";}
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[2449] | 110 | //! Get the pointer to FitsOpenFile
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[2456] | 111 | inline FitsOpenFile* GetFitsOpenFile(void) const {return FitsOF;}
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[1673] | 112 | //! Get the FITS file pointer (cfistio pointer)
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[3114] | 113 | inline fitsfile* GetFitsPtr(void) const {return FitsOF->GetFitsPtr();}
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[1654] | 114 | //! Get the number of HDU in the FITS file
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[2456] | 115 | inline int NHDU(void) const
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| 116 | {if(FitsOF) return FitsOF->NHDU(); else return 0;}
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[1654] | 117 | //! Get the number of the HDU read
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[2456] | 118 | inline int HDU(void) const
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| 119 | {if(FitsOF) return FitsOF->HDU(); else return 0;}
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[1654] | 120 | //! Get the HDU type
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[2456] | 121 | inline int HDUType(void) const
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| 122 | {if(FitsOF) return FitsOF->HDUType(); else return 0;}
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[1654] | 123 | //! Get the number of rows in the FITS HDU to be read
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[3128] | 124 | inline LONGLONG GetNbLine(void) const {return NBline;}
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[1654] | 125 | //! Get the number of columns in the FITS HDU to be read
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[2456] | 126 | inline int GetNbCol(void) const {return NBcol;}
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[1654] | 127 | //! Get the columns number that is read
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[2456] | 128 | inline int GetColNum(void) const {return ColNum;}
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[1654] | 129 | //! Get the columns label that is read
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[2456] | 130 | inline string GetColLabel(void) const {return ColLabel;}
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[1654] | 131 | //! Get the columns type code that is read
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[2456] | 132 | inline int GetColTypeCode(void) const {return ColTypeCode;}
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[1654] | 133 | //! Get the columns fits tunit that is read
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[2456] | 134 | inline string GetColTUnit(void) const {return ColTUnit;}
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[1654] | 135 | //! Get the columns fits tform that is read
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[2456] | 136 | inline string GetColTForm(void) const {return ColTForm;}
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[1657] | 137 | //! Get the read requested buffer length
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[2456] | 138 | inline long GetBLen(void) const {return BuffLen;}
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[1654] | 139 | //! Get the read buffer direction
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[2456] | 140 | inline long GetBSens(void) const {return BuffSens;}
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[1654] | 141 | //! Print to os
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[2456] | 142 | virtual void Print(ostream& os,int lp=1) const;
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[1654] | 143 | //! Print to stdout
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[2456] | 144 | inline void Print(int lp=1) const {Print(cout,lp);}
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[1657] | 145 | //! Get the read effective buffer length
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[2456] | 146 | inline long GetNBuffer(void) const {return NBuffer;}
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[1654] | 147 | //! Get the read bufferpointer
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| 148 | inline double* GetBuffer(void) {return Buffer;}
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| 149 |
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| 150 | protected:
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[2449] | 151 | void Init(FitsOpenFile* fof,const char *collabel,int colnum
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[1654] | 152 | ,int ihdu,long blen,long bsens,int lp);
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| 153 | void Delete(void);
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| 154 |
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[2456] | 155 | string ColLabel,ColTUnit,ColTForm;
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| 156 | int ColNum,ColTypeCode,NBcol;
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[3128] | 157 | LONGLONG NBline;
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[1654] | 158 |
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[1657] | 159 | double NulVal;
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| 160 | unsigned short DbgLevel;
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[1654] | 161 | long BuffLen, BuffSens;
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| 162 |
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[3128] | 163 | LONGLONG NFitsRead;
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[2449] | 164 | FitsOpenFile* FitsOF;
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[3128] | 165 | LONGLONG LineDeb, LineFin;
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[1654] | 166 | double *Buffer;
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| 167 | long NBuffer;
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| 168 | };
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| 169 |
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[2449] | 170 | ///////////////////////////////////////////////////////////////////
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| 171 | //! Class for reading a column in a FITS ASCII or BINARY table with fits file opening
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| 172 | class FitsABTColRead : public FitsABTColRd {
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| 173 | public:
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| 174 | FitsABTColRead(string fname,string collabel,int ihdu=0
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| 175 | ,long blen=100,long bsens=1,int lp=0);
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| 176 | FitsABTColRead(string fname,int colnum,int ihdu=0
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| 177 | ,long blen=100,long bsens=1,int lp=0);
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| 178 | FitsABTColRead(const char *cfname,const char *collabel,int ihdu=0
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| 179 | ,long blen=100,long bsens=1,int lp=0);
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| 180 | FitsABTColRead(const char *cfname,int colnum,int ihdu=0
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| 181 | ,long blen=100,long bsens=1,int lp=0);
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| 182 | FitsABTColRead(FitsABTColRead& fbt);
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| 183 | FitsABTColRead();
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| 184 | virtual ~FitsABTColRead();
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| 185 | };
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| 186 |
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[2453] | 187 |
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| 188 | ///////////////////////////////////////////////////////////////////
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| 189 | //! Class for reading a 2D image from a FITS file
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| 190 | class FitsImg2DRd : public AnyDataObj {
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| 191 | public:
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| 192 | FitsImg2DRd(FitsOpenFile* fof,int ihdu=0,int lp=0);
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| 193 | FitsImg2DRd(FitsImg2DRd& fbt);
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| 194 | FitsImg2DRd();
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| 195 | virtual ~FitsImg2DRd();
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| 196 |
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[3128] | 197 | double ReadKey(char *keyname);
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| 198 | long ReadKeyL(char *keyname);
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| 199 | LONGLONG ReadKeyLL(char *keyname);
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| 200 | string ReadKeyS(char *keyname);
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[2453] | 201 |
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[3128] | 202 | LONGLONG Read(TMatrix<uint_2>& data);
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| 203 | LONGLONG Read(TMatrix<int_4>& data);
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| 204 | LONGLONG Read(TMatrix<int_8>& data);
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| 205 | LONGLONG Read(TMatrix<float>& data);
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| 206 | LONGLONG Read(TMatrix<double>& data);
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[3188] | 207 | double Read(LONGLONG numcol, LONGLONG numrow);
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[2453] | 208 |
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| 209 | //! Set debug level
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| 210 | inline void SetDebug(int lp=0) {DbgLevel = (unsigned short) lp;}
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| 211 | //! Set null value to be return when reading null data (0=return the data)
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| 212 | inline void SetNulVal(double nulval=0.) {NulVal = nulval;}
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| 213 | //! Get the pointer to FitsOpenFile
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[2456] | 214 | inline FitsOpenFile* GetFitsOpenFile(void) const {return FitsOF;}
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| 215 | //! Get the FITS file pointer (cfistio pointer)
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[3114] | 216 | inline fitsfile* GetFitsPtr(void) const {return FitsOF->GetFitsPtr();}
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[2456] | 217 | //! Get the number of HDU in the FITS file
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| 218 | inline int NHDU(void) const
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| 219 | {if(FitsOF) return FitsOF->NHDU(); else return 0;}
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[2453] | 220 | //! Get the number of the HDU read
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[2456] | 221 | inline int HDU(void) const
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| 222 | {if(FitsOF) return FitsOF->HDU(); else return 0;}
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[2453] | 223 | //! Get the HDU type
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[2456] | 224 | inline int HDUType(void) const
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| 225 | {if(FitsOF) return FitsOF->HDUType(); else return 0;}
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[2453] | 226 | //! Get NAXIS1
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[3128] | 227 | inline LONGLONG Naxis1(void) const {return Naxis[0];}
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[2453] | 228 | //! Get NAXIS2
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[3128] | 229 | inline LONGLONG Naxis2(void) const {return Naxis[1];}
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[2453] | 230 |
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| 231 | protected:
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| 232 | void Init(FitsOpenFile* fof,int ihdu,int lp);
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| 233 |
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[3128] | 234 | LONGLONG Naxis[2];
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[2453] | 235 | double NulVal;
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| 236 | unsigned short DbgLevel;
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| 237 |
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| 238 | FitsOpenFile* FitsOF;
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| 239 | };
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[2591] | 240 |
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[2791] | 241 | ///////////////////////////////////////////////////////////////////
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| 242 | //! Class for reading a 2D image from a FITS file
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| 243 | class FitsImg2DRead : public FitsImg2DRd {
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| 244 | public:
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| 245 | FitsImg2DRead(string fname,int ihdu=0,int lp=0);
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| 246 | FitsImg2DRead(const char *cfname,int ihdu=0,int lp=0);
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| 247 | FitsImg2DRead(FitsImg2DRead& fbt);
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| 248 | FitsImg2DRead();
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| 249 | virtual ~FitsImg2DRead();
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| 250 | };
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| 251 |
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[3114] | 252 |
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| 253 | ///////////////////////////////////////////////////////////////////
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| 254 | //! Class for reading a 3D image from a FITS file
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| 255 | class FitsImg3DRd : public AnyDataObj {
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| 256 | public:
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| 257 | FitsImg3DRd(FitsOpenFile* fof,int ihdu=0,int lp=0);
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| 258 | FitsImg3DRd(FitsImg3DRd& fbt);
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| 259 | FitsImg3DRd();
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| 260 | virtual ~FitsImg3DRd();
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| 261 |
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[3128] | 262 | double ReadKey(char *keyname);
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| 263 | long ReadKeyL(char *keyname);
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| 264 | LONGLONG ReadKeyLL(char *keyname);
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| 265 | string ReadKeyS(char *keyname);
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[3114] | 266 |
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[3128] | 267 | LONGLONG Read(TArray<uint_2>& data);
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| 268 | LONGLONG Read(TArray<int_4>& data);
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| 269 | LONGLONG Read(TArray<int_8>& data);
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| 270 | LONGLONG Read(TArray<float>& data);
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| 271 | LONGLONG Read(TArray<double>& data);
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[3188] | 272 | double Read(LONGLONG i, LONGLONG j, LONGLONG k);
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[3114] | 273 |
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| 274 | //! Set debug level
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| 275 | inline void SetDebug(int lp=0) {DbgLevel = (unsigned short) lp;}
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| 276 | //! Set null value to be return when reading null data (0=return the data)
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| 277 | inline void SetNulVal(double nulval=0.) {NulVal = nulval;}
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| 278 | //! Get the pointer to FitsOpenFile
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| 279 | inline FitsOpenFile* GetFitsOpenFile(void) const {return FitsOF;}
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| 280 | //! Get the FITS file pointer (cfistio pointer)
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| 281 | inline fitsfile* GetFitsPtr(void) const {return FitsOF->GetFitsPtr();}
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| 282 | //! Get the number of HDU in the FITS file
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| 283 | inline int NHDU(void) const
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| 284 | {if(FitsOF) return FitsOF->NHDU(); else return 0;}
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| 285 | //! Get the number of the HDU read
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| 286 | inline int HDU(void) const
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| 287 | {if(FitsOF) return FitsOF->HDU(); else return 0;}
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| 288 | //! Get the HDU type
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| 289 | inline int HDUType(void) const
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| 290 | {if(FitsOF) return FitsOF->HDUType(); else return 0;}
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| 291 | //! Get NAXIS1
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[3128] | 292 | inline LONGLONG Naxis1(void) const {return Naxis[0];}
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[3114] | 293 | //! Get NAXIS2
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[3128] | 294 | inline LONGLONG Naxis2(void) const {return Naxis[1];}
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[3114] | 295 | //! Get NAXIS3
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[3128] | 296 | inline LONGLONG Naxis3(void) const {return Naxis[2];}
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[3114] | 297 |
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| 298 | protected:
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| 299 | void Init(FitsOpenFile* fof,int ihdu,int lp);
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| 300 |
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[3128] | 301 | LONGLONG Naxis[3];
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[3114] | 302 | double NulVal;
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| 303 | unsigned short DbgLevel;
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| 304 |
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| 305 | FitsOpenFile* FitsOF;
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| 306 | };
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| 307 |
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| 308 | ///////////////////////////////////////////////////////////////////
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| 309 | //! Class for reading a 3D image from a FITS file
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| 310 | class FitsImg3DRead : public FitsImg3DRd {
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| 311 | public:
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| 312 | FitsImg3DRead(string fname,int ihdu=0,int lp=0);
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| 313 | FitsImg3DRead(const char *cfname,int ihdu=0,int lp=0);
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| 314 | FitsImg3DRead(FitsImg3DRead& fbt);
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| 315 | FitsImg3DRead();
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| 316 | virtual ~FitsImg3DRead();
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| 317 | };
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| 318 |
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[2591] | 319 | } // namespace SOPHYA
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| 320 | #endif /* FABTCOLREAD_H_SEEN */
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