1 | /* Interface Fits BINARY/ASCII Table Column Reader cmv 26/09/2001 */
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2 | #ifndef FABTCOLREAD_H_SEEN
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3 | #define FABTCOLREAD_H_SEEN
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4 |
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5 | #include "machdefs.h"
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6 | #include <iostream>
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7 | #include <string.h>
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8 | #include <string>
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9 |
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10 | #include "anydataobj.h"
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11 | #include "tvector.h"
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12 | #include "FitsIO/fitsio.h"
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13 |
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14 | namespace SOPHYA {
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15 |
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16 | ///////////////////////////////////////////////////////////////////
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17 | //! Class for opening a FITS file for reading
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18 | class FitsOpenFile : public AnyDataObj {
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19 | public:
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20 | FitsOpenFile(string fname);
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21 | FitsOpenFile(const char *cfname);
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22 | FitsOpenFile();
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23 | FitsOpenFile(FitsOpenFile& fof);
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24 | virtual ~FitsOpenFile();
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25 |
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26 | inline string FileName() const {return FitsFN;}
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27 | //! Get the number of the HDU read
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28 | inline int HDU(void) const {return IHdu;}
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29 | //! Get the number of the HDU type
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30 | inline int HDUType(void) const {return HduType;}
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31 | //! Get the number of HDU in file
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32 | inline int NHDU() const {return NHdu;}
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33 | //! Get the CFISTIO fits file pointer
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34 | inline fitsfile* GetFitsPtr() const {return FitsPtr;}
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35 | //! Set the positionning status of the file
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36 | inline void SetPosStatus(bool sta=true) {HasBeenPos = sta;}
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37 | //! Get the positionning status of the file
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38 | inline bool GetPosStatus(void) const {return HasBeenPos;}
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39 |
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40 | int MoveToHDU(int ihdu);
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41 | int MoveToFirst(int hdutype,int ihdudeb=1);
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42 | int MoveToLast(int hdutype,int ihdudeb=1);
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43 | void Print(void);
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44 |
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45 | static double ReadKey(fitsfile *fitsptr,char *keyname);
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46 | static long ReadKeyL(fitsfile *fitsptr,char *keyname);
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47 | static string ReadKeyS(fitsfile *fitsptr,char *keyname);
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48 | static void printerror(int sta);
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49 |
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50 | protected:
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51 | void Init(const char *cfname);
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52 | void Delete(void);
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53 |
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54 | string FitsFN;
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55 | int NHdu, IHdu, HduType;
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56 | fitsfile *FitsPtr;
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57 | bool HasBeenPos;
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58 | };
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59 |
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60 | ///////////////////////////////////////////////////////////////////
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61 | //! Class for reading a column in a FITS ASCII or BINARY table
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62 | class FitsABTColRd : public AnyDataObj {
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63 | public:
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64 | FitsABTColRd(FitsOpenFile* fof,string collabel,int ihdu=0
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65 | ,long blen=100,long bsens=1,int lp=0);
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66 | FitsABTColRd(FitsOpenFile* fof,int colnum,int ihdu=0
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67 | ,long blen=100,long bsens=1,int lp=0);
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68 | FitsABTColRd(FitsABTColRd& fbt);
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69 | FitsABTColRd();
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70 | virtual ~FitsABTColRd();
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71 |
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72 | void ChangeBuffer(long blen=100,long bsens=1);
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73 |
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74 | double ReadKey(char *keyname);
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75 | long ReadKeyL(char *keyname);
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76 | string ReadKeyS(char *keyname);
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77 |
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78 | double Read(long n,bool usebuffer=true);
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79 |
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80 | long Read(long n1,long n2,TVector<uint_2>& data);
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81 | long Read(long n1,long n2,TVector<int_4>& data);
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82 | long Read(long n1,long n2,TVector<int_8>& data);
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83 | long Read(long n1,long n2,TVector<float>& data);
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84 | long Read(long n1,long n2,TVector<double>& data);
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85 |
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86 | //! return the value of the first row
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87 | double ReadFirstRow(bool usebuffer=false)
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88 | {return Read(0,usebuffer);}
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89 | //! return the value of the last row
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90 | double ReadLastRow(bool usebuffer=false)
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91 | {return Read(NBline-1,usebuffer);}
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92 |
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93 | long FirstRow(double val1,double val2,long rowstart=-1);
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94 | long LastRow(double val1,double val2,long rowstart=-1);
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95 |
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96 | //! Set debug level
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97 | inline void SetDebug(int lp=0) {DbgLevel = (unsigned short) lp;}
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98 | //! Set null value to be return when reading null data (0=return the data)
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99 | inline void SetNulVal(double nulval=0.) {NulVal = nulval;}
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100 | //! Get the FITS file name
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101 | inline string FileName(void) const
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102 | {if(FitsOF) return FitsOF->FileName(); else return (string)"";}
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103 | //! Get the pointer to FitsOpenFile
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104 | inline FitsOpenFile* GetFitsOpenFile(void) const {return FitsOF;}
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105 | //! Get the FITS file pointer (cfistio pointer)
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106 | inline fitsfile* GetFitsPtr(void) const {return FitsOF->GetFitsPtr();}
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107 | //! Get the number of HDU in the FITS file
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108 | inline int NHDU(void) const
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109 | {if(FitsOF) return FitsOF->NHDU(); else return 0;}
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110 | //! Get the number of the HDU read
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111 | inline int HDU(void) const
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112 | {if(FitsOF) return FitsOF->HDU(); else return 0;}
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113 | //! Get the HDU type
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114 | inline int HDUType(void) const
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115 | {if(FitsOF) return FitsOF->HDUType(); else return 0;}
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116 | //! Get the number of rows in the FITS HDU to be read
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117 | inline long GetNbLine(void) const {return NBline;}
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118 | //! Get the number of columns in the FITS HDU to be read
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119 | inline int GetNbCol(void) const {return NBcol;}
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120 | //! Get the columns number that is read
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121 | inline int GetColNum(void) const {return ColNum;}
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122 | //! Get the columns label that is read
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123 | inline string GetColLabel(void) const {return ColLabel;}
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124 | //! Get the columns type code that is read
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125 | inline int GetColTypeCode(void) const {return ColTypeCode;}
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126 | //! Get the columns fits tunit that is read
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127 | inline string GetColTUnit(void) const {return ColTUnit;}
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128 | //! Get the columns fits tform that is read
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129 | inline string GetColTForm(void) const {return ColTForm;}
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130 | //! Get the read requested buffer length
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131 | inline long GetBLen(void) const {return BuffLen;}
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132 | //! Get the read buffer direction
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133 | inline long GetBSens(void) const {return BuffSens;}
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134 | //! Print to os
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135 | virtual void Print(ostream& os,int lp=1) const;
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136 | //! Print to stdout
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137 | inline void Print(int lp=1) const {Print(cout,lp);}
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138 | //! Get the read effective buffer length
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139 | inline long GetNBuffer(void) const {return NBuffer;}
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140 | //! Get the read bufferpointer
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141 | inline double* GetBuffer(void) {return Buffer;}
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142 |
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143 | protected:
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144 | void Init(FitsOpenFile* fof,const char *collabel,int colnum
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145 | ,int ihdu,long blen,long bsens,int lp);
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146 | void Delete(void);
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147 |
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148 | string ColLabel,ColTUnit,ColTForm;
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149 | int ColNum,ColTypeCode,NBcol;
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150 | long NBline;
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151 |
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152 | double NulVal;
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153 | unsigned short DbgLevel;
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154 | long BuffLen, BuffSens;
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155 |
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156 | unsigned long NFitsRead;
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157 | FitsOpenFile* FitsOF;
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158 | long LineDeb, LineFin;
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159 | double *Buffer;
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160 | long NBuffer;
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161 | };
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162 |
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163 | ///////////////////////////////////////////////////////////////////
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164 | //! Class for reading a column in a FITS ASCII or BINARY table with fits file opening
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165 | class FitsABTColRead : public FitsABTColRd {
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166 | public:
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167 | FitsABTColRead(string fname,string collabel,int ihdu=0
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168 | ,long blen=100,long bsens=1,int lp=0);
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169 | FitsABTColRead(string fname,int colnum,int ihdu=0
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170 | ,long blen=100,long bsens=1,int lp=0);
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171 | FitsABTColRead(const char *cfname,const char *collabel,int ihdu=0
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172 | ,long blen=100,long bsens=1,int lp=0);
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173 | FitsABTColRead(const char *cfname,int colnum,int ihdu=0
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174 | ,long blen=100,long bsens=1,int lp=0);
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175 | FitsABTColRead(FitsABTColRead& fbt);
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176 | FitsABTColRead();
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177 | virtual ~FitsABTColRead();
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178 | };
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179 |
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180 |
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181 | ///////////////////////////////////////////////////////////////////
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182 | //! Class for reading a 2D image from a FITS file
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183 | class FitsImg2DRd : public AnyDataObj {
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184 | public:
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185 | FitsImg2DRd(FitsOpenFile* fof,int ihdu=0,int lp=0);
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186 | FitsImg2DRd(FitsImg2DRd& fbt);
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187 | FitsImg2DRd();
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188 | virtual ~FitsImg2DRd();
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189 |
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190 | double ReadKey(char *keyname);
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191 | long ReadKeyL(char *keyname);
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192 | string ReadKeyS(char *keyname);
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193 |
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194 | size_t Read(TMatrix<uint_2>& data);
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195 | size_t Read(TMatrix<int_4>& data);
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196 | size_t Read(TMatrix<int_8>& data);
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197 | size_t Read(TMatrix<float>& data);
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198 | size_t Read(TMatrix<double>& data);
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199 |
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200 | //! Set debug level
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201 | inline void SetDebug(int lp=0) {DbgLevel = (unsigned short) lp;}
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202 | //! Set null value to be return when reading null data (0=return the data)
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203 | inline void SetNulVal(double nulval=0.) {NulVal = nulval;}
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204 | //! Get the pointer to FitsOpenFile
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205 | inline FitsOpenFile* GetFitsOpenFile(void) const {return FitsOF;}
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206 | //! Get the FITS file pointer (cfistio pointer)
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207 | inline fitsfile* GetFitsPtr(void) const {return FitsOF->GetFitsPtr();}
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208 | //! Get the number of HDU in the FITS file
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209 | inline int NHDU(void) const
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210 | {if(FitsOF) return FitsOF->NHDU(); else return 0;}
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211 | //! Get the number of the HDU read
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212 | inline int HDU(void) const
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213 | {if(FitsOF) return FitsOF->HDU(); else return 0;}
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214 | //! Get the HDU type
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215 | inline int HDUType(void) const
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216 | {if(FitsOF) return FitsOF->HDUType(); else return 0;}
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217 | //! Get NAXIS1
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218 | inline long Naxis1(void) const {return Naxis[0];}
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219 | //! Get NAXIS2
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220 | inline long Naxis2(void) const {return Naxis[1];}
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221 |
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222 | protected:
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223 | void Init(FitsOpenFile* fof,int ihdu,int lp);
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224 |
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225 | long Naxis[2];
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226 | double NulVal;
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227 | unsigned short DbgLevel;
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228 |
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229 | FitsOpenFile* FitsOF;
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230 | };
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231 |
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232 | ///////////////////////////////////////////////////////////////////
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233 | //! Class for reading a 2D image from a FITS file
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234 | class FitsImg2DRead : public FitsImg2DRd {
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235 | public:
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236 | FitsImg2DRead(string fname,int ihdu=0,int lp=0);
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237 | FitsImg2DRead(const char *cfname,int ihdu=0,int lp=0);
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238 | FitsImg2DRead(FitsImg2DRead& fbt);
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239 | FitsImg2DRead();
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240 | virtual ~FitsImg2DRead();
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241 | };
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242 |
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243 |
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244 | ///////////////////////////////////////////////////////////////////
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245 | //! Class for reading a 3D image from a FITS file
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246 | class FitsImg3DRd : public AnyDataObj {
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247 | public:
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248 | FitsImg3DRd(FitsOpenFile* fof,int ihdu=0,int lp=0);
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249 | FitsImg3DRd(FitsImg3DRd& fbt);
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250 | FitsImg3DRd();
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251 | virtual ~FitsImg3DRd();
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252 |
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253 | double ReadKey(char *keyname);
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254 | long ReadKeyL(char *keyname);
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255 | string ReadKeyS(char *keyname);
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256 |
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257 | size_t Read(TArray<uint_2>& data);
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258 | size_t Read(TArray<int_4>& data);
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259 | size_t Read(TArray<int_8>& data);
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260 | size_t Read(TArray<float>& data);
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261 | size_t Read(TArray<double>& data);
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262 |
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263 | //! Set debug level
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264 | inline void SetDebug(int lp=0) {DbgLevel = (unsigned short) lp;}
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265 | //! Set null value to be return when reading null data (0=return the data)
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266 | inline void SetNulVal(double nulval=0.) {NulVal = nulval;}
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267 | //! Get the pointer to FitsOpenFile
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268 | inline FitsOpenFile* GetFitsOpenFile(void) const {return FitsOF;}
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269 | //! Get the FITS file pointer (cfistio pointer)
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270 | inline fitsfile* GetFitsPtr(void) const {return FitsOF->GetFitsPtr();}
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271 | //! Get the number of HDU in the FITS file
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272 | inline int NHDU(void) const
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273 | {if(FitsOF) return FitsOF->NHDU(); else return 0;}
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274 | //! Get the number of the HDU read
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275 | inline int HDU(void) const
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276 | {if(FitsOF) return FitsOF->HDU(); else return 0;}
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277 | //! Get the HDU type
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278 | inline int HDUType(void) const
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279 | {if(FitsOF) return FitsOF->HDUType(); else return 0;}
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280 | //! Get NAXIS1
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281 | inline long Naxis1(void) const {return Naxis[0];}
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282 | //! Get NAXIS2
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283 | inline long Naxis2(void) const {return Naxis[1];}
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284 | //! Get NAXIS3
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285 | inline long Naxis3(void) const {return Naxis[2];}
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286 |
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287 | protected:
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288 | void Init(FitsOpenFile* fof,int ihdu,int lp);
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289 |
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290 | long Naxis[3];
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291 | double NulVal;
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292 | unsigned short DbgLevel;
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293 |
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294 | FitsOpenFile* FitsOF;
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295 | };
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296 |
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297 | ///////////////////////////////////////////////////////////////////
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298 | //! Class for reading a 3D image from a FITS file
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299 | class FitsImg3DRead : public FitsImg3DRd {
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300 | public:
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301 | FitsImg3DRead(string fname,int ihdu=0,int lp=0);
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302 | FitsImg3DRead(const char *cfname,int ihdu=0,int lp=0);
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303 | FitsImg3DRead(FitsImg3DRead& fbt);
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304 | FitsImg3DRead();
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305 | virtual ~FitsImg3DRead();
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306 | };
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307 |
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308 | } // namespace SOPHYA
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309 | #endif /* FABTCOLREAD_H_SEEN */
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