[3493] | 1 | /*
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| 2 | --- SOPHYA software - FitsIOServer module ---
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| 3 | R. Ansari , 2005-2008
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| 4 | (C) UPS+LAL IN2P3/CNRS (C) DAPNIA-SPP/CEA
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| 5 | */
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[2820] | 6 | #ifndef FITSARRHAND_H
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| 7 | #define FITSARRHAND_H
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| 8 |
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| 9 | #include "machdefs.h"
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| 10 | #include <string>
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| 11 | #include "tarray.h"
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[2864] | 12 | #include "tvector.h"
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[2820] | 13 |
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| 14 | #include "fitshandler.h"
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[2864] | 15 | #include "fitsblkrw.h"
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[2820] | 16 |
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| 17 | namespace SOPHYA {
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| 18 |
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| 19 | /*!
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| 20 | \ingroup FitsIOServer
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| 21 | \brief FITS I/O handler for array objects
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| 22 | */
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| 23 |
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| 24 | template <class T>
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| 25 | class FitsArrayHandler : public FitsHandlerInterface {
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| 26 | public :
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| 27 | FitsArrayHandler() { dobj=NULL; ownobj=true; }
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| 28 | FitsArrayHandler(TArray< T > & obj) { dobj = &obj; ownobj=false; }
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| 29 | virtual ~FitsArrayHandler() { if (ownobj && dobj) delete dobj; }
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| 30 | virtual AnyDataObj* DataObj() { return(dobj); }
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| 31 |
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[2864] | 32 | virtual int CheckHandling(AnyDataObj & o)
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[2820] | 33 | {
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[2864] | 34 | if ( (typeid(o) == typeid(TArray<T>)) ||
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| 35 | (typeid(o) == typeid(TMatrix<T>)) ||
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| 36 | (typeid(o) == typeid(TVector<T>)) ) return 2;
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[2820] | 37 | TArray<T> * po = dynamic_cast< TArray<T> * >(& o);
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[2864] | 38 | if (po == NULL) return 0;
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| 39 | else return 1;
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[2820] | 40 | }
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[2864] | 41 |
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[2820] | 42 | virtual void SetDataObj(AnyDataObj & o)
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| 43 | {
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| 44 | TArray<T> * po = dynamic_cast< TArray<T> * >(& o);
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| 45 | if (po == NULL) {
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| 46 | string msg = "FitsHandler<T>::SetDataObj() Wrong object type: " ;
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| 47 | msg += typeid(o).name();
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| 48 | throw TypeMismatchExc(msg);
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| 49 | }
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| 50 | if (ownobj && dobj) delete dobj; dobj = po; ownobj = false;
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| 51 | }
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| 52 |
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[2864] | 53 | virtual int CheckReadability(FitsInOutFile& is)
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| 54 | {
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| 55 | if (is.CurrentHDUType() != IMAGE_HDU) return 0;
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| 56 | T x = 0;
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[3167] | 57 | LONGLONG naxes[BASEARRAY_MAXNDIMS];
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[2864] | 58 | int naxis=BASEARRAY_MAXNDIMS;
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[2898] | 59 | int imgtyp = is.GetImageHDUInfo(naxis, naxes);
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| 60 | if (naxis < 1) return 0;
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| 61 | if (FitsTypes::ImageType(x) == imgtyp) return 2;
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[2864] | 62 | else return 1;
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| 63 | }
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| 64 |
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[2820] | 65 | virtual FitsHandlerInterface* Clone()
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| 66 | { return new FitsArrayHandler< T >(); }
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| 67 |
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| 68 | inline operator T&() { return(*dobj); }
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| 69 |
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| 70 | //----- Ecriture
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[3493] | 71 | //! Writes the complete array as an IMAGE HDU
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[2820] | 72 | virtual void Write(FitsInOutFile& os)
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| 73 | {
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[3493] | 74 | if (( dobj == NULL) || (dobj->Size() < 1))
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| 75 | throw NullPtrError("FitsArrayHandler<T>::Write() dobj=NULL or dobj->Size()=0");
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| 76 |
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[3167] | 77 | LONGLONG naxes[BASEARRAY_MAXNDIMS] = {0,0,0,0,0};
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[2820] | 78 | for(int_4 id=0; id<dobj->NbDimensions(); id++)
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| 79 | naxes[id] = dobj->Size(id);
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[3887] | 80 | int naxis=dobj->NbDimensions();
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[2844] | 81 | T x = 0;
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[3887] | 82 | TVector<T> * pvec = dynamic_cast< TVector<T> * >(dobj);
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| 83 | if (pvec!=NULL) { naxis=1; naxes[0]=pvec->NElts(); }
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| 84 | os.CreateImageHDU(FitsTypes::ImageType(x), naxis, naxes);
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[2820] | 85 | os.WriteHeaderRecords(dobj->Info());
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[2864] | 86 | MuTyV mtv;
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| 87 | mtv = "SOPHYA::TArray<T>";
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| 88 | os.WriteKey("SOPCLSNM",mtv," Object class name ");
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[2820] | 89 | FitsBlockRW<T>::WriteImageData(os, dobj->Data(), dobj->Size());
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| 90 | }
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| 91 |
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| 92 | //----- Lecture
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[3493] | 93 | //! Resize the array and reads the complete IMAGE HDU to the array
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[2820] | 94 | virtual void Read(FitsInOutFile& is)
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| 95 | {
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[3167] | 96 | LONGLONG naxes[BASEARRAY_MAXNDIMS];
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[2820] | 97 | int naxis=BASEARRAY_MAXNDIMS;
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| 98 | is.GetImageHDUInfo(naxis, naxes);
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[2864] | 99 | if ( dobj == NULL) {
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| 100 | if (naxis == 1) dobj = new TVector<T>;
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[2907] | 101 | else if (naxis == 2) {
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| 102 | if ( (naxes[0] == 1) || (naxes[1] == 1) )
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| 103 | dobj = new TVector<T>;
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| 104 | else dobj = new TMatrix<T>;
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| 105 | }
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[2864] | 106 | else dobj = new TArray<T>;
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| 107 | ownobj = true;
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| 108 | }
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[2820] | 109 | sa_size_t sz[BASEARRAY_MAXNDIMS];
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[3493] | 110 | if (naxis > BASEARRAY_MAXNDIMS) {
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| 111 | cerr << "FitsArrayHandler<T>::Read()/Warning FITS NAXIS=" << naxis
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| 112 | << " > BASEARRAY_MAXNDIMS=" << BASEARRAY_MAXNDIMS << endl;
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| 113 | naxis = BASEARRAY_MAXNDIMS;
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| 114 | }
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[2820] | 115 | for(int_4 id=0; id<naxis; id++) sz[id] = naxes[id];
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[3885] | 116 | TMatrix<T> * pmx = dynamic_cast< TMatrix<T> * >(dobj);
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| 117 | if ((naxis==1)&&(pmx!=NULL)) {
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| 118 | TVector<T> * pvec = dynamic_cast< TVector<T> * >(dobj);
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| 119 | if (pvec!=NULL) pvec->SetSize(naxes[0]);
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| 120 | else pmx->SetSize(1,naxes[0]);
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| 121 | }
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| 122 | else dobj->SetSize(naxis, sz, 1, false);
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[2820] | 123 | FitsBlockRW<T>::ReadImageData(is, dobj->Data(), dobj->Size());
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| 124 | is.GetHeaderRecords(dobj->Info());
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| 125 | }
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| 126 |
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[3493] | 127 | //----- Lecture avec specification d'offset et taille donnee par le tableau
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| 128 | /*! \brief Reads from the fits file into the array, at the specified offset
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| 129 |
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| 130 | The array should be allocated and its size is used to define the number of
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| 131 | pixels to be read.
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| 132 | \warning The offset should be specified with SOPHYA/C array index convention
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| 133 | (starting at zero) - and NOT the cfitsio/fortran convention.
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| 134 | The offset should contain as many elements as the fits NAXIS keyword.
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| 135 | */
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| 136 | virtual void ReadAtOffset(FitsInOutFile& is, sa_size_t* offset)
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| 137 | {
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| 138 | if (( dobj == NULL) || (dobj->Size() < 1))
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| 139 | throw NullPtrError("FitsArrayHandler<T>::ReadAtOffset() dobj=NULL or dobj->Size()=0");
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| 140 |
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| 141 | LONGLONG naxes[BASEARRAY_MAXNDIMS];
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| 142 | int naxis=BASEARRAY_MAXNDIMS;
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| 143 | is.GetImageHDUInfo(naxis, naxes);
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| 144 | LONGLONG fpix[15];
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| 145 | int namx = (naxis < 15) ? naxis : 15;
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| 146 | for(int i=0; i<namx; i++) fpix[i] = offset[i]+1;
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| 147 | FitsBlockRW<T>::ReadImageData(is, dobj->Data(), dobj->Size(), fpix);
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| 148 | is.GetHeaderRecords(dobj->Info());
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| 149 | }
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| 150 |
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| 151 | //----- Ecriture avec specification d'offset et taille donnee par le tableau
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| 152 | /*! \brief Writes the array to the fits file, at the specified offset
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| 153 |
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| 154 | The array should be allocated and its size is used to define the number of
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[3850] | 155 | pixels to be written.
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[3493] | 156 | \warning The offset should be specified with SOPHYA/C array index convention
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| 157 | (starting at zero) - and NOT the cfitsio/fortran convention.
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| 158 | The offset should contain as many elements as the fits NAXIS keyword.
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| 159 | \warning The IMAGE HDU should be already created using FitsInOutFile::CreateImageHDU().
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| 160 | */
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| 161 | virtual void WriteAtOffset(FitsInOutFile& os, sa_size_t* offset)
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| 162 | {
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| 163 | if (( dobj == NULL) || (dobj->Size() < 1))
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| 164 | throw NullPtrError("FitsArrayHandler<T>::ReadAtOffset() dobj=NULL or dobj->Size()=0");
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| 165 |
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| 166 | LONGLONG naxes[BASEARRAY_MAXNDIMS];
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| 167 | int naxis=BASEARRAY_MAXNDIMS;
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| 168 | os.GetImageHDUInfo(naxis, naxes);
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| 169 | LONGLONG fpix[15];
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| 170 | int namx = (naxis < 15) ? naxis : 15;
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| 171 | for(int i=0; i<namx; i++) fpix[i] = offset[i]+1;
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| 172 | FitsBlockRW<T>::WriteImageData(os, dobj->Data(), dobj->Size(), fpix);
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| 173 | }
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| 174 |
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[2820] | 175 | protected :
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| 176 | TArray<T> * dobj;
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| 177 | bool ownobj; // True si dobj obtenu par new
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| 178 | };
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| 179 |
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| 180 |
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[3493] | 181 | //! operator << overload to write a TArray<T> to a fits IMAGE HDU
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[2820] | 182 | template <class T>
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| 183 | inline FitsInOutFile& operator << (FitsInOutFile& os, TArray<T> const & obj)
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| 184 | { FitsArrayHandler<T> fio(const_cast< TArray<T> &>(obj)); fio.Write(os); return os; }
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| 185 |
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[3493] | 186 | //! operator >> overload to read a TArray<T> from a fits IMAGE HDU
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[2820] | 187 | template <class T>
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| 188 | inline FitsInOutFile& operator >> (FitsInOutFile& is, TArray<T> & obj)
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| 189 | { FitsArrayHandler<T> fio(obj); fio.Read(is); is.MoveToNextHDU(); return(is); }
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| 190 |
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| 191 |
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| 192 | } // Fin du namespace
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| 193 |
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| 194 | #endif
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| 195 |
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