1 | /*
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2 | --- SOPHYA software - FitsIOServer module ---
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3 | R. Ansari , 2005-2008
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4 | (C) UPS+LAL IN2P3/CNRS (C) DAPNIA-SPP/CEA
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5 | */
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6 | #ifndef FITSARRHAND_H
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7 | #define FITSARRHAND_H
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8 |
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9 | #include "machdefs.h"
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10 | #include <string>
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11 | #include "tarray.h"
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12 | #include "tvector.h"
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13 |
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14 | #include "fitshandler.h"
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15 | #include "fitsblkrw.h"
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16 |
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17 | namespace SOPHYA {
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18 |
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19 | /*!
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20 | \ingroup FitsIOServer
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21 | \brief FITS I/O handler for array objects
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22 | */
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23 |
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24 | template <class T>
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25 | class FitsArrayHandler : public FitsHandlerInterface {
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26 | public :
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27 | FitsArrayHandler() { dobj=NULL; ownobj=true; }
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28 | FitsArrayHandler(TArray< T > & obj) { dobj = &obj; ownobj=false; }
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29 | virtual ~FitsArrayHandler() { if (ownobj && dobj) delete dobj; }
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30 | virtual AnyDataObj* DataObj() { return(dobj); }
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31 |
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32 | virtual int CheckHandling(AnyDataObj & o)
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33 | {
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34 | if ( (typeid(o) == typeid(TArray<T>)) ||
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35 | (typeid(o) == typeid(TMatrix<T>)) ||
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36 | (typeid(o) == typeid(TVector<T>)) ) return 2;
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37 | TArray<T> * po = dynamic_cast< TArray<T> * >(& o);
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38 | if (po == NULL) return 0;
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39 | else return 1;
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40 | }
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41 |
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42 | virtual void SetDataObj(AnyDataObj & o)
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43 | {
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44 | TArray<T> * po = dynamic_cast< TArray<T> * >(& o);
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45 | if (po == NULL) {
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46 | string msg = "FitsHandler<T>::SetDataObj() Wrong object type: " ;
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47 | msg += typeid(o).name();
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48 | throw TypeMismatchExc(msg);
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49 | }
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50 | if (ownobj && dobj) delete dobj; dobj = po; ownobj = false;
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51 | }
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52 |
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53 | virtual int CheckReadability(FitsInOutFile& is)
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54 | {
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55 | if (is.CurrentHDUType() != IMAGE_HDU) return 0;
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56 | T x = 0;
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57 | LONGLONG naxes[BASEARRAY_MAXNDIMS];
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58 | int naxis=BASEARRAY_MAXNDIMS;
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59 | int imgtyp = is.GetImageHDUInfo(naxis, naxes);
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60 | if (naxis < 1) return 0;
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61 | if (FitsTypes::ImageType(x) == imgtyp) return 2;
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62 | else return 1;
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63 | }
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64 |
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65 | virtual FitsHandlerInterface* Clone()
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66 | { return new FitsArrayHandler< T >(); }
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67 |
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68 | inline operator T&() { return(*dobj); }
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69 |
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70 | //----- Ecriture
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71 | //! Writes the complete array as an IMAGE HDU
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72 | virtual void Write(FitsInOutFile& os)
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73 | {
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74 | if (( dobj == NULL) || (dobj->Size() < 1))
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75 | throw NullPtrError("FitsArrayHandler<T>::Write() dobj=NULL or dobj->Size()=0");
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76 |
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77 | LONGLONG naxes[BASEARRAY_MAXNDIMS] = {0,0,0,0,0};
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78 | for(int_4 id=0; id<dobj->NbDimensions(); id++)
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79 | naxes[id] = dobj->Size(id);
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80 | int naxis=dobj->NbDimensions();
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81 | T x = 0;
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82 | TVector<T> * pvec = dynamic_cast< TVector<T> * >(dobj);
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83 | if (pvec!=NULL) { naxis=1; naxes[0]=pvec->NElts(); }
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84 | os.CreateImageHDU(FitsTypes::ImageType(x), naxis, naxes);
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85 | os.WriteHeaderRecords(dobj->Info());
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86 | MuTyV mtv;
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87 | mtv = "SOPHYA::TArray<T>";
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88 | os.WriteKey("SOPCLSNM",mtv," Object class name ");
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89 | FitsBlockRW<T>::WriteImageData(os, dobj->Data(), dobj->Size());
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90 | }
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91 |
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92 | //----- Lecture
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93 | //! Resize the array and reads the complete IMAGE HDU to the array
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94 | virtual void Read(FitsInOutFile& is)
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95 | {
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96 | LONGLONG naxes[BASEARRAY_MAXNDIMS];
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97 | int naxis=BASEARRAY_MAXNDIMS;
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98 | is.GetImageHDUInfo(naxis, naxes);
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99 | if ( dobj == NULL) {
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100 | if (naxis == 1) dobj = new TVector<T>;
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101 | else if (naxis == 2) {
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102 | if ( (naxes[0] == 1) || (naxes[1] == 1) )
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103 | dobj = new TVector<T>;
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104 | else dobj = new TMatrix<T>;
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105 | }
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106 | else dobj = new TArray<T>;
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107 | ownobj = true;
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108 | }
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109 | sa_size_t sz[BASEARRAY_MAXNDIMS];
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110 | if (naxis > BASEARRAY_MAXNDIMS) {
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111 | cerr << "FitsArrayHandler<T>::Read()/Warning FITS NAXIS=" << naxis
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112 | << " > BASEARRAY_MAXNDIMS=" << BASEARRAY_MAXNDIMS << endl;
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113 | naxis = BASEARRAY_MAXNDIMS;
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114 | }
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115 | for(int_4 id=0; id<naxis; id++) sz[id] = naxes[id];
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116 | TMatrix<T> * pmx = dynamic_cast< TMatrix<T> * >(dobj);
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117 | if ((naxis==1)&&(pmx!=NULL)) {
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118 | TVector<T> * pvec = dynamic_cast< TVector<T> * >(dobj);
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119 | if (pvec!=NULL) pvec->SetSize(naxes[0]);
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120 | else pmx->SetSize(1,naxes[0]);
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121 | }
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122 | else dobj->SetSize(naxis, sz, 1, false);
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123 | FitsBlockRW<T>::ReadImageData(is, dobj->Data(), dobj->Size());
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124 | is.GetHeaderRecords(dobj->Info());
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125 | }
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126 |
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127 | //----- Lecture avec specification d'offset et taille donnee par le tableau
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128 | /*! \brief Reads from the fits file into the array, at the specified offset
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129 |
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130 | The array should be allocated and its size is used to define the number of
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131 | pixels to be read.
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132 | \warning The offset should be specified with SOPHYA/C array index convention
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133 | (starting at zero) - and NOT the cfitsio/fortran convention.
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134 | The offset should contain as many elements as the fits NAXIS keyword.
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135 | */
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136 | virtual void ReadAtOffset(FitsInOutFile& is, sa_size_t* offset)
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137 | {
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138 | if (( dobj == NULL) || (dobj->Size() < 1))
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139 | throw NullPtrError("FitsArrayHandler<T>::ReadAtOffset() dobj=NULL or dobj->Size()=0");
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140 |
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141 | LONGLONG naxes[BASEARRAY_MAXNDIMS];
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142 | int naxis=BASEARRAY_MAXNDIMS;
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143 | is.GetImageHDUInfo(naxis, naxes);
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144 | LONGLONG fpix[15];
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145 | int namx = (naxis < 15) ? naxis : 15;
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146 | for(int i=0; i<namx; i++) fpix[i] = offset[i]+1;
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147 | FitsBlockRW<T>::ReadImageData(is, dobj->Data(), dobj->Size(), fpix);
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148 | is.GetHeaderRecords(dobj->Info());
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149 | }
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150 |
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151 | //----- Ecriture avec specification d'offset et taille donnee par le tableau
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152 | /*! \brief Writes the array to the fits file, at the specified offset
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153 |
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154 | The array should be allocated and its size is used to define the number of
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155 | pixels to be written.
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156 | \warning The offset should be specified with SOPHYA/C array index convention
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157 | (starting at zero) - and NOT the cfitsio/fortran convention.
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158 | The offset should contain as many elements as the fits NAXIS keyword.
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159 | \warning The IMAGE HDU should be already created using FitsInOutFile::CreateImageHDU().
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160 | */
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161 | virtual void WriteAtOffset(FitsInOutFile& os, sa_size_t* offset)
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162 | {
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163 | if (( dobj == NULL) || (dobj->Size() < 1))
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164 | throw NullPtrError("FitsArrayHandler<T>::ReadAtOffset() dobj=NULL or dobj->Size()=0");
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165 |
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166 | LONGLONG naxes[BASEARRAY_MAXNDIMS];
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167 | int naxis=BASEARRAY_MAXNDIMS;
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168 | os.GetImageHDUInfo(naxis, naxes);
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169 | LONGLONG fpix[15];
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170 | int namx = (naxis < 15) ? naxis : 15;
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171 | for(int i=0; i<namx; i++) fpix[i] = offset[i]+1;
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172 | FitsBlockRW<T>::WriteImageData(os, dobj->Data(), dobj->Size(), fpix);
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173 | }
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174 |
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175 | protected :
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176 | TArray<T> * dobj;
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177 | bool ownobj; // True si dobj obtenu par new
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178 | };
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179 |
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180 |
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181 | //! operator << overload to write a TArray<T> to a fits IMAGE HDU
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182 | template <class T>
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183 | inline FitsInOutFile& operator << (FitsInOutFile& os, TArray<T> const & obj)
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184 | { FitsArrayHandler<T> fio(const_cast< TArray<T> &>(obj)); fio.Write(os); return os; }
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185 |
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186 | //! operator >> overload to read a TArray<T> from a fits IMAGE HDU
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187 | template <class T>
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188 | inline FitsInOutFile& operator >> (FitsInOutFile& is, TArray<T> & obj)
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189 | { FitsArrayHandler<T> fio(obj); fio.Read(is); is.MoveToNextHDU(); return(is); }
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190 |
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191 |
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192 | } // Fin du namespace
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193 |
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194 | #endif
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195 |
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