[949] | 1 | #include "machdefs.h"
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| 2 | #include <stdlib.h>
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[839] | 3 | #include "fitsfile.h"
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| 4 | #include "pexceptions.h"
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| 5 | #include "strutil.h"
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[903] | 6 | #include "anydataobj.h"
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| 7 | #include "fitsspherehealpix.h"
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[1136] | 8 |
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[1371] | 9 | /*!
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| 10 | \defgroup FitsIOServer FitsIOServer module
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| 11 | This module contains classes which handle FITS format I/O for
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| 12 | SOPHYA objects. This module uses cfitsio library.
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| 13 | */
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[1136] | 14 |
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[1359] | 15 | void BnTblLine::setFormat(int dc, int fc, int ic, int lc, int bc,int cc, vector<string> names)
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[1218] | 16 | {
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[1359] | 17 | int nbcols = dc + fc + ic + cc + lc + bc;
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[1218] | 18 | int maxName = names.size();
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| 19 | if (nbcols != maxName)
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| 20 | {
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| 21 | cout << " WARNING: BnTblLine:: length of vector of column names not equal to total number of columns" << endl;
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| 22 | maxName = nbcols < maxName ? nbcols : maxName;
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| 23 | }
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| 24 | ColName_ = vector<string>(nbcols);
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| 25 | for (int k=0; k < maxName; k++) ColName_[k] = names[k];
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| 26 | if (dc >0) ddata_ = vector<double>(dc);
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| 27 | if (fc >0) fdata_ = vector<float>(fc);
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| 28 | if (ic >0) idata_ = vector<int>(fc);
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| 29 | if (cc >0) cdata_ = vector<string>(fc);
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[1359] | 30 | if (lc >0) ldata_ = vector<long>(lc);
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| 31 | if (bc >0) bdata_ = vector<unsigned char>(bc);
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[1218] | 32 | }
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| 33 |
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| 34 | bool BnTblLine::sameFormat(const BnTblLine& btl) const
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| 35 | {
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[1359] | 36 | if (btl.ddata_.size() == ddata_.size() && btl.fdata_.size() == fdata_.size() && btl.idata_.size() == idata_.size() && btl.cdata_.size() == cdata_.size() && btl.ldata_.size() == ldata_.size() && btl.bdata_.size() == bdata_.size()) return true;
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[1218] | 37 | else return false;
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| 38 | }
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| 39 |
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| 40 | void BnTblLine::Print()
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| 41 | {
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| 42 | int k;
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| 43 | cout << " ********* ligne ************* " << endl;
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| 44 | cout << " *** noms de variables " << endl;
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| 45 | for (k=0; k < ColName_.size(); k++) cout << ColName_[k] << " ";
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| 46 | cout << endl;
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| 47 | cout << " *** variables doubles " << endl;
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| 48 | for (k=0; k < ddata_.size(); k++) cout << ddata_[k] << " ";
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| 49 | cout << endl;
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| 50 | cout << " *** variables float " << endl;
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| 51 | for (k=0; k < fdata_.size(); k++) cout << fdata_[k] << " ";
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| 52 | cout << endl;
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| 53 | cout << " *** variables int " << endl;
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| 54 | for (k=0; k < idata_.size(); k++) cout << idata_[k] << " ";
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| 55 | cout << endl;
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| 56 | cout << " *** variables string " << endl;
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| 57 | for (k=0; k < cdata_.size(); k++) cout << cdata_[k] << " ";
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| 58 | cout << endl;
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[1359] | 59 | cout << " *** variables long " << endl;
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| 60 | for (k=0; k < ldata_.size(); k++) cout << ldata_[k] << " ";
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| 61 | cout << endl;
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| 62 | cout << " *** variables byte " << endl;
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| 63 | for (k=0; k < bdata_.size(); k++) cout << (int)bdata_[k] << " ";
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| 64 | cout << endl;
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[1218] | 65 | cout << " ***************************** " << endl;
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| 66 | }
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| 67 |
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| 68 |
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| 69 |
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| 70 | /*!
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| 71 | \class SOPHYA::FitsIOHandler
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[1371] | 72 | \ingroup FitsIOServer
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[1218] | 73 | The class structure is analogous to Sophya-PPersist system :
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| 74 | Each SOPHYA object XXX is associated with a object of class FITS_XXX
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| 75 | (inheriting from FitsFileHandler), to which input/output operations with FITS
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| 76 | files are delegated (through a class Hierarchy : FitsFile (virtual),
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| 77 | FitsInFile, FitsOutFile) . A typical example of use is the following :
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| 78 |
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| 79 | \verbatim
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| 80 | int m=... ;
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| 81 | SphereHEALPix<r_8> sphere1(m); // definition of the SOPHYA object
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| 82 | .... fill the sphere ....
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| 83 |
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| 84 | FITS_SphereHEALPix<r_8> fits_sph1(sphere1);
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| 85 | // delegated object
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| 86 | fits_sph.Write("myfile.fits"); // writing on FITS file
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| 87 |
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| 88 | FITS_SphereHEALPix<r_8> fits_sph2("myfile.fits");
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| 89 | // load a delegated object
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| 90 | // from FITS file
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| 91 | SphereHEALPix<r_8> sphere2=(SphereHEALPix<r_8>)fits_sph2;
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| 92 | // casting the delegated object
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| 93 | // into a SOPHYA object
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| 94 | \endverbatim
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| 95 |
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| 96 |
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| 97 | */
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| 98 |
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| 99 | /*! \fn void SOPHYA::FitsIOHandler::Read(char flnm[],int hdunum)
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| 100 |
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| 101 | this method is called from inherited objects :
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| 102 |
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| 103 | opens a file 'flnm'
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| 104 |
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| 105 | gets parameters in extension-header (hdunum)
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| 106 |
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| 107 | calls the method 'ReadFromFits' from the inherited object
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| 108 | */
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[1136] | 109 | void FitsIOHandler::Read(char flnm[],int hdunum)
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[839] | 110 | {
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[1136] | 111 | FitsInFile ifts(flnm);
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| 112 | Read(ifts, hdunum);
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[839] | 113 | }
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[1218] | 114 |
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| 115 | /*! \fn void SOPHYA::FitsIOHandler::Read(FitsInFile& is, int hdunum)
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| 116 | Read the data on extension hdunum (or primary header, if hdunum=1) from FitsInFIle. If hdunum is not addressed, , one reads the next extension, with respect to the current position.
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| 117 | */
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[1136] | 118 | void FitsIOHandler::Read(FitsInFile& is, int hdunum)
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| 119 | {
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[1300] | 120 | is.ReadHeader(hdunum);
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[1136] | 121 | ReadFromFits(is);
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| 122 | }
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| 123 |
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| 124 |
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[1218] | 125 | /*! \fn void SOPHYA::FitsIOHandler::Write(char flnm[])
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| 126 | this method is called from inherited objects.
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| 127 |
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| 128 | for writing a new object in a new fits-extension :
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| 129 |
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[1234] | 130 | \warning By convention, primary header may contain fits-image data.
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| 131 | For switching off this convention (i.e. to make sure that all data will be on fits-extensions) use the method :
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[1218] | 132 |
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| 133 | firstImageOnPrimaryHeader() (see below)
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| 134 |
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| 135 | calls the method 'WriteToFits' from the inherited object
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| 136 |
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| 137 | */
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[1193] | 138 | void FitsIOHandler::Write(char flnm[])
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[1136] | 139 |
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| 140 | {
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[1231] | 141 | FitsOutFile of(flnm, FitsFile::unknown);
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[1136] | 142 | Write(of);
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| 143 | }
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| 144 |
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| 145 | void FitsIOHandler::Write(FitsOutFile& os)
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| 146 | {
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| 147 | WriteToFits(os);
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| 148 | }
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| 149 |
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| 150 |
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| 151 |
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[839] | 152 |
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| 153 | FitsFile::~FitsFile()
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| 154 | {
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| 155 | int status = 0;
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[1175] | 156 | if( fptr_ != NULL)
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[903] | 157 | {
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| 158 | fits_close_file(fptr_,&status);
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[1175] | 159 | // je ne fais pas delete fptr_, c'est la lib. fitsio qui a fait
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| 160 | // new...
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[903] | 161 | }
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[1175] | 162 | if( status ) printerror( status );
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[839] | 163 | }
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[903] | 164 |
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[1136] | 165 |
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| 166 | void FitsFile::printerror(int &status)
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| 167 | //*****************************************************/
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| 168 | //* Print out cfitsio error messages and exit program */
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| 169 | //*****************************************************/
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[1045] | 170 | {
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[1136] | 171 | if( status )
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| 172 | {
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| 173 | fits_report_error(stderr,status);
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| 174 | throw IOExc("FitsFile:: error FITSIO status");
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| 175 | }
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| 176 | return;
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| 177 | }
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[903] | 178 |
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[1136] | 179 | void FitsFile::printerror(int& status, char* texte)
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| 180 | //*****************************************************/
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| 181 | //* Print out cfitsio error messages and exit program */
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| 182 | //*****************************************************/
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| 183 | {
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| 184 | // print out cfitsio error messages and exit program
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| 185 | // print error report
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[1235] | 186 | fits_report_error(stderr, status);
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[1136] | 187 | cout << " erreur:: " << texte << endl;
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| 188 | throw IOExc("FitsFile:: error FITSIO status");
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| 189 | }
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[1703] | 190 | void FitsFile::printerrorAndContinue(int& status, char* texte)
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| 191 | //*****************************************************/
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| 192 | //* Print out cfitsio error messages and exit program */
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| 193 | //*****************************************************/
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| 194 | {
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| 195 | // print out cfitsio error messages and exit program
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| 196 | // print error report
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| 197 | fits_report_error(stderr, status);
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| 198 | cout << " erreur:: " << texte << endl;
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| 199 | // throw IOExc("FitsFile:: error FITSIO status");
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| 200 | }
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[1136] | 201 |
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| 202 | void FitsFile::ResetStatus(int& status)
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| 203 | {
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| 204 | fits_status_ = status;
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| 205 | status = 0;
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[1235] | 206 | fits_clear_errmsg();
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[1136] | 207 | }
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| 208 |
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[1209] | 209 | string FitsFile::GetErrStatus(int status)
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[1136] | 210 | {
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| 211 | char text[31];
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| 212 | fits_get_errstatus(status, text);
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| 213 | return string(text);
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| 214 | }
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| 215 |
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[1218] | 216 | /*!
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| 217 | \class SOPHYA::FitsInFile
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[1371] | 218 | \ingroup FitsIOServer
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[1246] | 219 | class for reading SOPHYA objects from FITS Format Files (uses cfitsio lib)
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[1218] | 220 | */
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| 221 |
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[1136] | 222 | FitsInFile::FitsInFile()
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| 223 | {
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| 224 | InitNull();
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| 225 | }
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[1218] | 226 |
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[1231] | 227 | FitsInFile::FitsInFile(string const & flnm)
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[1136] | 228 | {
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[1175] | 229 | InitNull();
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| 230 | int status = 0;
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[1231] | 231 | fits_open_file(&fptr_,flnm.c_str(),READONLY,&status);
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| 232 | if( status ) printerror( status );
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| 233 | }
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| 234 |
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| 235 | FitsInFile::FitsInFile(const char * flnm)
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| 236 | {
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| 237 | InitNull();
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| 238 | int status = 0;
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[1175] | 239 | fits_open_file(&fptr_,flnm,READONLY,&status);
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| 240 | if( status ) printerror( status );
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[1136] | 241 | }
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| 242 |
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| 243 |
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| 244 | void FitsInFile::InitNull()
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| 245 | {
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[1300] | 246 | imageDataType_ = FitsDataType_NULL;
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[1045] | 247 | naxis_ = 0;
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| 248 | nbData_ = 0;
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| 249 | nrows_ = 0;
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| 250 | nbcols_ = 0;
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| 251 | naxisn_.clear();
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| 252 | repeat_.clear();
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| 253 | noms_.clear();
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| 254 | taille_des_chaines_.clear();
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| 255 | dvl_.Clear();
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[1175] | 256 |
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[1045] | 257 | }
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| 258 |
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[1218] | 259 | //////////////////////////////////////////////////////////
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| 260 | // methods with general purpose
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| 261 | /////////////////////////////////////////////////////////
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[1045] | 262 |
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[1136] | 263 | int FitsInFile::NbBlocks(char flnm[])
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[903] | 264 | {
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| 265 | int status = 0;
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| 266 | int nbhdu = 0;
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| 267 | fitsfile* fileptr;
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| 268 | fits_open_file(&fileptr,flnm,READONLY,&status);
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| 269 | if( status ) printerror( status, "NbBlocks: erreur ouverture fichier" );
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| 270 | fits_get_num_hdus(fileptr, &nbhdu, &status);
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| 271 | fits_close_file(fileptr,&status);
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| 272 | return nbhdu;
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| 273 | }
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[1334] | 274 | int FitsInFile::NbBlocks()
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| 275 | {
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| 276 | int status = 0;
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| 277 | int nbhdu = 0;
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| 278 | fits_get_num_hdus(fptr_, &nbhdu, &status);
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| 279 | return nbhdu;
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| 280 | }
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[903] | 281 |
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[1231] | 282 | void FitsInFile::GetBlockType(char flnm[], int hdunum, FitsExtensionType& typeOfExtension, int& naxis, vector<int>& naxisn, FitsDataType& dataType, DVList& dvl )
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[903] | 283 | {
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| 284 | int status = 0;
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| 285 | fitsfile* fileptr;
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| 286 | fits_open_file(&fileptr,flnm,READONLY,&status);
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[1209] | 287 | if( status ) printerror( status, "GetBlockType: erreur ouverture fichier" );
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[903] | 288 | // move to the specified HDU number
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| 289 | int hdutype = 0;
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| 290 | fits_movabs_hdu(fileptr,hdunum,&hdutype,&status);
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[1209] | 291 | if( status ) printerror( status,"GetBlockType: erreur movabs");
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[903] | 292 | if(hdutype == IMAGE_HDU)
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| 293 | {
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[1231] | 294 | typeOfExtension = FitsExtensionType_IMAGE;
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[1300] | 295 | GetImageParameters (fileptr, dataType, naxis, naxisn);
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[903] | 296 | }
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| 297 | else
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| 298 | if(hdutype == ASCII_TBL || hdutype == BINARY_TBL)
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| 299 | {
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| 300 | int nrows = 0;
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| 301 | vector<string> noms;
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[1300] | 302 | vector<FitsDataType> types;
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[903] | 303 | vector<int> taille_des_chaines;
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[971] | 304 | GetBinTabParameters(fileptr, naxis, nrows, naxisn, noms, types, taille_des_chaines);
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| 305 | int k;
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| 306 | for (k=0; k< naxisn.size(); k++) naxisn[k] *= nrows;
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[903] | 307 | if(hdutype == ASCII_TBL)
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| 308 | {
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[1231] | 309 | typeOfExtension = FitsExtensionType_ASCII_TBL;
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| 310 | dataType = FitsDataType_ASCII;
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[903] | 311 | }
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| 312 | else
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| 313 | {
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[1231] | 314 | typeOfExtension = FitsExtensionType_BINARY_TBL;
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[1300] | 315 | dataType = types[0];
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[903] | 316 | }
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| 317 | }
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| 318 | else
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| 319 | {
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| 320 | cout << " hdutype= " << hdutype << endl;
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[1209] | 321 | throw IOExc("FitsFile::GetBlockType: this HDU type is unknown");
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[903] | 322 | }
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| 323 |
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[971] | 324 | KeywordsIntoDVList(fileptr, dvl, hdunum);
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[903] | 325 | fits_close_file(fileptr,&status);
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| 326 | }
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| 327 |
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[1136] | 328 |
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[1300] | 329 | void FitsInFile::ReadHeader(int hdunum)
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[1045] | 330 | {
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[1300] | 331 | // InitNull();
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[1045] | 332 | int status = 0;
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[1334] | 333 | if (hdunum<0)
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| 334 | {
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[1703] | 335 | throw PException(" FitsInFile::ReadHeader : hdu number must be not negative");
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[1334] | 336 | }
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[1234] | 337 | if (hdunum != 0 ) hdunum_ = hdunum;
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| 338 |
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| 339 | // si le numero de header non precise
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| 340 | else
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[1045] | 341 | {
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[1234] | 342 | // si c'est le premier objet a lire
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| 343 | if (hdunum_ == 0)
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[1045] | 344 | {
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[1234] | 345 | // on calcule le numero de header a lire
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[1246] | 346 | if (imageOnPrimary_ == true ) hdunum_ = 1;
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[1234] | 347 | else hdunum_ = 2;
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[1045] | 348 | }
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[1234] | 349 | // sinon objet suivant
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| 350 | else hdunum_++;
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[1045] | 351 | }
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[1771] | 352 | getHeaderWithSophyaObject();
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[1334] | 353 | if ( hdutype_ == FitsExtensionType_NULL )
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| 354 | {
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| 355 | if (hdunum == 0 && hdunum_ == 1)
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| 356 | {
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| 357 | hdunum_++;
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[1771] | 358 | getHeaderWithSophyaObject();
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[1334] | 359 | }
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| 360 | else
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| 361 | {
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| 362 | cout << " WARNING (FitsInFile::ReadHeader) : no SOPHYA object on HDU number : " << hdunum_ << endl;
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| 363 | }
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| 364 | }
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[1418] | 365 | if ( hdutype_ == FitsExtensionType_EOF )
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| 366 | {
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| 367 | throw PException("FitsFile::ReadHeader, attempt to read through EOF");
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| 368 | }
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[1045] | 369 | }
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| 370 |
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[1354] | 371 | string FitsInFile::getStringKeyword(int hdunum, string keyw, int& retStatus)
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| 372 | {
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| 373 | string s;
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| 374 | retStatus = 0;
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| 375 | int status = 0;
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| 376 | if (hdunum != hdunum_ )
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| 377 | {
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| 378 | int hdutype;
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| 379 | fits_movabs_hdu(fptr_,hdunum,&hdutype,&status);
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| 380 | }
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| 381 |
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| 382 | char value[FLEN_VALUE];
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| 383 | char* keyname= const_cast<char*>(keyw.c_str());
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| 384 | fits_read_key_str(fptr_,keyname,value,NULL,&status);
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| 385 | if (status == 0)
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| 386 | s = string(value);
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| 387 | else retStatus = status;
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| 388 | if (hdunum != hdunum_ )
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| 389 | {
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| 390 | int hdutype;
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| 391 | if (hdunum_ != 0)
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| 392 | fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
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| 393 | else fits_movabs_hdu(fptr_,1,&hdutype,&status);
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| 394 |
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| 395 | }
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| 396 | return s;
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| 397 | }
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| 398 | bool FitsInFile::hasKeyword(int hdunum, string keyw)
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[1353] | 399 | {
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| 400 | bool has=false;
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| 401 | int status = 0;
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| 402 | if (hdunum != hdunum_ )
|
---|
| 403 | {
|
---|
| 404 | int hdutype;
|
---|
| 405 | fits_movabs_hdu(fptr_,hdunum,&hdutype,&status);
|
---|
| 406 | }
|
---|
[1218] | 407 |
|
---|
[1353] | 408 | char value[FLEN_VALUE];
|
---|
| 409 | char* keyname= const_cast<char*>(keyw.c_str());
|
---|
| 410 | fits_read_keyword(fptr_,keyname,value,NULL,&status);
|
---|
| 411 | if (status == 0)
|
---|
| 412 | has = true;
|
---|
| 413 | else
|
---|
| 414 | if (status == KEY_NO_EXIST ) status =0;
|
---|
| 415 | else fits_report_error(stderr,status);
|
---|
| 416 | if (hdunum != hdunum_ )
|
---|
| 417 | {
|
---|
| 418 | int hdutype;
|
---|
| 419 | if (hdunum_ != 0)
|
---|
| 420 | fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
|
---|
| 421 | else fits_movabs_hdu(fptr_,1,&hdutype,&status);
|
---|
| 422 |
|
---|
| 423 | }
|
---|
| 424 | return has;
|
---|
| 425 | }
|
---|
| 426 |
|
---|
[1771] | 427 | void FitsInFile::GetKeywordsFromHeader (int hdunum, list<FitsKeyword>& mots_cles) const
|
---|
| 428 | {
|
---|
| 429 | int status = 0;
|
---|
| 430 | int hdutype;
|
---|
| 431 | fits_movabs_hdu(fptr_,hdunum,&hdutype,&status);
|
---|
| 432 | if( status ) fits_report_error(stderr,status);
|
---|
| 433 |
|
---|
| 434 | // get number of keywords
|
---|
| 435 | int nkeys,keypos;
|
---|
| 436 | fits_get_hdrpos(fptr_, &nkeys, &keypos,&status);
|
---|
| 437 | if( status ) fits_report_error(stderr,status);
|
---|
| 438 | // shift with the number of mandatory keywords
|
---|
| 439 | int num= 0;
|
---|
| 440 | // if primary header
|
---|
| 441 | if (hdunum == 1)
|
---|
| 442 | {
|
---|
| 443 | // read NAXIS
|
---|
| 444 | int naxis=0;
|
---|
| 445 | fits_read_key(fptr_,TINT,"NAXIS",&naxis,NULL,&status);
|
---|
| 446 | // number of mandatory keywords
|
---|
| 447 | num = naxis+3;
|
---|
| 448 | }
|
---|
| 449 | // extensions
|
---|
| 450 | else
|
---|
| 451 | {
|
---|
| 452 | if (hdutype == IMAGE_HDU)
|
---|
| 453 | {
|
---|
| 454 | // read NAXIS
|
---|
| 455 | int naxis=0;
|
---|
| 456 | fits_read_key(fptr_,TINT,"NAXIS",&naxis,NULL,&status);
|
---|
| 457 | // number of mandatory keywords
|
---|
| 458 | num = naxis+5;
|
---|
| 459 | }
|
---|
| 460 | else
|
---|
| 461 | if(hdutype == ASCII_TBL || hdutype == BINARY_TBL)
|
---|
| 462 | {
|
---|
| 463 | // number of mandatory keywords
|
---|
| 464 | num = 8;
|
---|
| 465 | }
|
---|
| 466 | }
|
---|
| 467 | int j;
|
---|
| 468 | char keyname[LEN_KEYWORD];
|
---|
| 469 | char value[FLEN_VALUE];
|
---|
| 470 | char comment[FLEN_COMMENT];
|
---|
| 471 | for(j = num+1; j <= nkeys; j++)
|
---|
| 472 | {
|
---|
| 473 | char dtype;
|
---|
| 474 | fits_read_keyn(fptr_,j,keyname,value,comment,&status);
|
---|
| 475 | if(status)
|
---|
| 476 | {
|
---|
| 477 | fits_report_error(stderr,status);
|
---|
| 478 | status=0;
|
---|
| 479 | }
|
---|
| 480 | string kn(keyname);
|
---|
| 481 | string cm(comment);
|
---|
| 482 | string val(value);
|
---|
| 483 | FitsKeyword kw(kn, val, cm);
|
---|
| 484 | mots_cles.push_back(kw);
|
---|
| 485 | }
|
---|
| 486 | if (hdunum_ > 0) fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
|
---|
| 487 |
|
---|
| 488 | }
|
---|
[1300] | 489 | void FitsInFile::GetImageParameters (fitsfile* fileptr,FitsDataType& dataType,int& naxis,vector<int>& naxisn)
|
---|
[1218] | 490 | {
|
---|
| 491 | int hdunum=0;
|
---|
[1334] | 492 | // cout << " Reading a FITS image in HDU : " << fits_get_hdu_num(fileptr,&hdunum) << endl;
|
---|
[1218] | 493 | int status= 0;
|
---|
| 494 |
|
---|
| 495 | // bits per pixels
|
---|
[1300] | 496 | int bitpix=0;
|
---|
[1218] | 497 | fits_read_key(fileptr,TINT,"BITPIX",&bitpix,NULL,&status);
|
---|
| 498 | if( status ) printerror( status );
|
---|
[1300] | 499 | if(bitpix == DOUBLE_IMG) dataType = FitsDataType_double;
|
---|
| 500 | else if(bitpix == FLOAT_IMG) dataType = FitsDataType_float;
|
---|
| 501 | else if(bitpix == LONG_IMG || bitpix == SHORT_IMG ) dataType = FitsDataType_int;
|
---|
| 502 | else if (bitpix == BYTE_IMG) dataType = FitsDataType_char;
|
---|
| 503 | else
|
---|
| 504 | {
|
---|
| 505 | cout << " bitpix= " << bitpix << endl;
|
---|
| 506 | throw PException(" FitsFile::GetImageParameters : unsupported FITS data type");
|
---|
| 507 | }
|
---|
[1218] | 508 |
|
---|
| 509 | // number of dimensions in the FITS array
|
---|
| 510 | naxis= 0;
|
---|
| 511 | fits_read_key(fileptr,TINT,"NAXIS",&naxis,NULL,&status);
|
---|
| 512 | if( status ) printerror( status );
|
---|
| 513 | // read the NAXISn keywords to get image size
|
---|
| 514 | long* naxes = new long[naxis] ;
|
---|
| 515 | int nfound;
|
---|
| 516 | fits_read_keys_lng(fileptr,"NAXIS",1,naxis,naxes,&nfound,&status);
|
---|
| 517 | if( status ) printerror( status );
|
---|
| 518 | if (nfound != naxis )
|
---|
| 519 | cout << " WARNING : " << nfound << " axes found, expected naxis= " << naxis << endl;
|
---|
| 520 | int k;
|
---|
| 521 | for (k=0; k<naxis; k++)
|
---|
| 522 | {
|
---|
| 523 | naxisn.push_back( (int)naxes[k] );
|
---|
| 524 | }
|
---|
| 525 | delete [] naxes;
|
---|
| 526 | }
|
---|
| 527 |
|
---|
| 528 |
|
---|
| 529 |
|
---|
| 530 |
|
---|
| 531 | /*! \fn DVList SOPHYA::FitsInFile::DVListFromPrimaryHeader() const
|
---|
| 532 |
|
---|
| 533 | \return the keywords of primary header in a DVList
|
---|
| 534 |
|
---|
| 535 | */
|
---|
[1143] | 536 | DVList FitsInFile::DVListFromPrimaryHeader() const
|
---|
| 537 | {
|
---|
| 538 | int status;
|
---|
| 539 | DVList dvl;
|
---|
| 540 | KeywordsIntoDVList(fptr_, dvl, 1);
|
---|
| 541 | int hdutype = 0;
|
---|
| 542 | if (hdunum_ > 0) fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
|
---|
| 543 | return dvl;
|
---|
| 544 | }
|
---|
[1136] | 545 |
|
---|
[1771] | 546 | void FitsInFile::getHeaderWithSophyaObject()
|
---|
[971] | 547 | {
|
---|
[1300] | 548 | // si hdunum_ > 1 lit le header correspondant
|
---|
| 549 | // si hdunum_ = 1 se positionne au (et lit le) premier header qui
|
---|
| 550 | // contient reellement un objet
|
---|
[1234] | 551 | int status=0;
|
---|
| 552 | if (hdunum_ < 1) throw PException(" attempt to read hdunum < 1");
|
---|
[1300] | 553 | InitNull();
|
---|
[1234] | 554 | if (hdunum_ == 1)
|
---|
[839] | 555 | {
|
---|
[1234] | 556 | // presence of image ?
|
---|
| 557 | int naxis= 0;
|
---|
| 558 | fits_read_key(fptr_,TINT,"NAXIS",&naxis,NULL,&status);
|
---|
| 559 | if( status ) printerror( status );
|
---|
| 560 | if (naxis > 0 ) // there is an image
|
---|
| 561 | {
|
---|
[1334] | 562 | hdutype_ = FitsExtensionType_IMAGE;
|
---|
[1300] | 563 | GetImageParameters (fptr_, imageDataType_, naxis_, naxisn_);
|
---|
[1234] | 564 | nbData_ = 1;
|
---|
| 565 | int k;
|
---|
| 566 | for (k=0; k<naxis_; k++) if (naxisn_[k] > 0) nbData_ *= naxisn_[k];
|
---|
| 567 | KeywordsIntoDVList(fptr_, dvl_,hdunum_);
|
---|
| 568 | }
|
---|
| 569 | else
|
---|
| 570 | {
|
---|
[1334] | 571 | hdutype_ = FitsExtensionType_NULL;
|
---|
| 572 | KeywordsIntoDVList(fptr_, dvl_,hdunum_);
|
---|
[1234] | 573 | }
|
---|
[839] | 574 | }
|
---|
[1234] | 575 | else
|
---|
[839] | 576 | {
|
---|
[1234] | 577 | int hdutype;
|
---|
| 578 | fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
|
---|
[1334] | 579 |
|
---|
| 580 | if( status )
|
---|
[1234] | 581 | {
|
---|
[1334] | 582 | if (status == END_OF_FILE)
|
---|
| 583 | {
|
---|
| 584 | hdutype_= FitsExtensionType_EOF;
|
---|
| 585 | status =0;
|
---|
| 586 | return;
|
---|
| 587 | }
|
---|
| 588 | else
|
---|
| 589 | {
|
---|
[1771] | 590 | cout << "WARNING (FitsInFile::getHeaderWithSophyaObject) : error during movabs" << endl;
|
---|
[1334] | 591 | hdutype_= FitsExtensionType_ERROR;
|
---|
| 592 | status =0;
|
---|
| 593 | return;
|
---|
| 594 | }
|
---|
| 595 | // printerror( status,":FitsInFile::getHeader : erreur movabs");
|
---|
| 596 | }
|
---|
| 597 | if(hdutype == IMAGE_HDU)
|
---|
| 598 | {
|
---|
| 599 | hdutype_= FitsExtensionType_IMAGE;
|
---|
[1300] | 600 | GetImageParameters (fptr_, imageDataType_, naxis_, naxisn_);
|
---|
[1234] | 601 | nbData_ = 1;
|
---|
| 602 | int k;
|
---|
| 603 | for (k=0; k<naxis_; k++) if (naxisn_[k] > 0) nbData_ *= naxisn_[k];
|
---|
| 604 | KeywordsIntoDVList(fptr_, dvl_,hdunum_);
|
---|
| 605 | }
|
---|
[1334] | 606 | else if(hdutype == ASCII_TBL)
|
---|
[1234] | 607 | {
|
---|
[1334] | 608 | hdutype_= FitsExtensionType_ASCII_TBL;
|
---|
[1234] | 609 | GetBinTabParameters(fptr_,nbcols_, nrows_,repeat_, noms_, types_, taille_des_chaines_);
|
---|
| 610 | KeywordsIntoDVList(fptr_, dvl_, hdunum_);
|
---|
| 611 | }
|
---|
[1334] | 612 | else if(hdutype == BINARY_TBL)
|
---|
| 613 | {
|
---|
| 614 | hdutype_= FitsExtensionType_BINARY_TBL;
|
---|
| 615 | GetBinTabParameters(fptr_,nbcols_, nrows_,repeat_, noms_, types_, taille_des_chaines_);
|
---|
| 616 | KeywordsIntoDVList(fptr_, dvl_, hdunum_);
|
---|
| 617 | }
|
---|
| 618 | else
|
---|
| 619 | {
|
---|
| 620 | hdutype_= FitsExtensionType_NULL;
|
---|
| 621 | KeywordsIntoDVList(fptr_, dvl_, hdunum_);
|
---|
| 622 | }
|
---|
[839] | 623 | }
|
---|
[971] | 624 | }
|
---|
[839] | 625 |
|
---|
[1136] | 626 |
|
---|
[1234] | 627 | void FitsInFile::moveToFollowingHeader()
|
---|
| 628 | {
|
---|
| 629 | int status = 0;
|
---|
| 630 | hdunum_++;
|
---|
[1771] | 631 | getHeaderWithSophyaObject();
|
---|
[1334] | 632 | if ( hdutype_ == FitsExtensionType_NULL )
|
---|
| 633 | {
|
---|
| 634 | cout << " WARNING (FitsInFile::ReadHeader) : no SOPHYA object on HDU number : " << hdunum_ << endl;
|
---|
| 635 |
|
---|
| 636 | }
|
---|
[1234] | 637 | }
|
---|
[1218] | 638 |
|
---|
| 639 |
|
---|
| 640 |
|
---|
[1234] | 641 |
|
---|
| 642 |
|
---|
[1218] | 643 | /*! \fn int SOPHYA::FitsInFile::NbColsFromFits() const
|
---|
| 644 | \return number of columns (return 1 if IMAGE)
|
---|
| 645 | */
|
---|
[1136] | 646 | int FitsInFile::NbColsFromFits() const
|
---|
[839] | 647 | {
|
---|
[1334] | 648 | if(hdutype_ == FitsExtensionType_BINARY_TBL) return nbcols_;
|
---|
[971] | 649 | else
|
---|
[1334] | 650 | if(hdutype_ == FitsExtensionType_ASCII_TBL || hdutype_ == FitsExtensionType_IMAGE) return 1;
|
---|
[839] | 651 | else
|
---|
| 652 | {
|
---|
[1379] | 653 | cout << " hdutype= " << (int) hdutype_ << endl;
|
---|
[1334] | 654 | throw PException("FitsFile::NbColsFromFits, HDU not supported");
|
---|
[839] | 655 | }
|
---|
| 656 | }
|
---|
| 657 |
|
---|
[1218] | 658 | /*! \fn int SOPHYA::FitsInFile::NentriesFromFits(int nocol) const
|
---|
| 659 | \return number of data in the current IMAGE extension on FITS file, or number
|
---|
| 660 | of data of column number 'nocol' of the current BINTABLE extension
|
---|
| 661 | */
|
---|
[1136] | 662 | int FitsInFile::NentriesFromFits(int nocol) const
|
---|
[839] | 663 | {
|
---|
[1334] | 664 | if(hdutype_ == FitsExtensionType_BINARY_TBL) return nrows_*repeat_[nocol];
|
---|
[1136] | 665 | else
|
---|
[1334] | 666 | if(hdutype_ == FitsExtensionType_ASCII_TBL) return nrows_;
|
---|
[1136] | 667 | else
|
---|
[1334] | 668 | if(hdutype_ == FitsExtensionType_IMAGE) return nbData_;
|
---|
[1136] | 669 | else
|
---|
[839] | 670 | {
|
---|
[1379] | 671 | cout << "hdutype= " << (int) hdutype_ << endl;
|
---|
[1334] | 672 | throw PException("FitsFile::NentriesFromFits, this HDU is not supported");
|
---|
[839] | 673 | }
|
---|
| 674 | }
|
---|
| 675 |
|
---|
[1218] | 676 | /*! \fn char SOPHYA::FitsInFile::ColTypeFromFits(int nocol) const
|
---|
| 677 |
|
---|
| 678 | return a character denoting data type of column number 'nocol' in a BINTABLE :
|
---|
| 679 |
|
---|
| 680 | D : double
|
---|
| 681 |
|
---|
| 682 | E : float
|
---|
| 683 |
|
---|
| 684 | I : integer
|
---|
| 685 |
|
---|
| 686 | S : character string
|
---|
| 687 |
|
---|
| 688 | */
|
---|
| 689 |
|
---|
[1300] | 690 | FitsFile::FitsDataType FitsInFile::ColTypeFromFits(int nocol) const
|
---|
[839] | 691 | {
|
---|
[1334] | 692 | if(hdutype_ != FitsExtensionType_ASCII_TBL && hdutype_ != FitsExtensionType_BINARY_TBL)
|
---|
[839] | 693 | {
|
---|
[1136] | 694 | throw IOExc("FitsFile::TypeFromFits, this HDU is not an ASCII table nor a binary table");
|
---|
[839] | 695 | }
|
---|
[1136] | 696 | return types_[nocol];
|
---|
[839] | 697 | }
|
---|
[1218] | 698 |
|
---|
| 699 |
|
---|
| 700 | /*! \fn string SOPHYA::FitsInFile::ColNameFromFits(int nocol) const
|
---|
| 701 |
|
---|
| 702 | \return name of the column number 'nocol' of the current BINTABLE extension
|
---|
| 703 | */
|
---|
| 704 |
|
---|
[1136] | 705 | string FitsInFile::ColNameFromFits(int nocol) const
|
---|
[839] | 706 | {
|
---|
[1334] | 707 | if(hdutype_ != FitsExtensionType_ASCII_TBL && hdutype_ != FitsExtensionType_BINARY_TBL)
|
---|
[1045] | 708 | {
|
---|
[1136] | 709 | throw IOExc("FitsFile::TypeFromFits, this HDU is not an ASCII table nor a binary table");
|
---|
[1045] | 710 | }
|
---|
[1136] | 711 | return noms_[nocol];
|
---|
[839] | 712 | }
|
---|
| 713 |
|
---|
[1218] | 714 | /*! \fn int DSOPHYA::FitsInFile::ColStringLengthFromFits(int nocol) const
|
---|
| 715 |
|
---|
| 716 | \return number of characters of each data for the column number 'nocol' (if char* typed) of the current BINTABLE extension
|
---|
| 717 | */
|
---|
| 718 |
|
---|
[1136] | 719 | int FitsInFile::ColStringLengthFromFits(int nocol) const
|
---|
[839] | 720 | {
|
---|
[1334] | 721 | if(hdutype_ != FitsExtensionType_ASCII_TBL && hdutype_ != FitsExtensionType_BINARY_TBL)
|
---|
[1136] | 722 | {
|
---|
| 723 | throw IOExc("FitsFile::TypeFromFits, this HDU is not an ASCII table nor a binary table");
|
---|
| 724 | }
|
---|
| 725 | int index=-1;
|
---|
| 726 | int k;
|
---|
| 727 | for (k=0; k<=nocol; k++)
|
---|
| 728 | {
|
---|
[1300] | 729 | if (types_[k] == FitsDataType_char) index++;
|
---|
[1136] | 730 | }
|
---|
| 731 | return taille_des_chaines_[index];
|
---|
[839] | 732 | }
|
---|
[1218] | 733 |
|
---|
| 734 |
|
---|
| 735 |
|
---|
| 736 | /*! \fn void SOPHYA::FitsInFile::GetBinTabLine(int NoLine, double* ddata, float* fdata, int* idata, char ** cdata)
|
---|
| 737 |
|
---|
| 738 | Get the NoLine-th 'line' from the current BINTABLE extension on FITS file,
|
---|
| 739 | */
|
---|
| 740 |
|
---|
[1193] | 741 | void FitsInFile::GetBinTabLine(int NoLine, double* ddata, float* fdata, int* idata, char ** cdata)
|
---|
[839] | 742 | {
|
---|
| 743 | int status= 0;
|
---|
[1136] | 744 | int anull;
|
---|
| 745 | double dnull= 0.;
|
---|
| 746 | float fnull= 0.;
|
---|
| 747 | int inull= 0;
|
---|
| 748 | char* cnull= "";
|
---|
| 749 | int dcount = 0.;
|
---|
| 750 | int fcount = 0.;
|
---|
| 751 | int icount = 0;
|
---|
| 752 | int ccount =0;
|
---|
| 753 | int ncol;
|
---|
| 754 | long nels=1;
|
---|
[1499] | 755 | int ligneAsolue = NoLine+1;
|
---|
[1136] | 756 | for (ncol=0; ncol<nbcols_; ncol++)
|
---|
[861] | 757 | {
|
---|
[1499] | 758 | int repetition =repeat_[ncol];
|
---|
| 759 | int ligneALire = ligneAsolue/repetition;
|
---|
| 760 | int premierElement = ligneAsolue-ligneALire*repetition;
|
---|
| 761 | if (premierElement != 0 )
|
---|
| 762 | {
|
---|
| 763 | ligneALire++;
|
---|
| 764 | }
|
---|
| 765 | else premierElement = repetition;
|
---|
| 766 |
|
---|
[1136] | 767 | switch (types_[ncol])
|
---|
| 768 | {
|
---|
[1300] | 769 | case FitsDataType_double :
|
---|
[1499] | 770 | {
|
---|
| 771 | fits_read_col(fptr_,TDOUBLE,ncol+1,ligneALire,premierElement,1,&dnull,&ddata[dcount++],&anull,&status);
|
---|
[1136] | 772 | break;
|
---|
[1499] | 773 | }
|
---|
| 774 | case FitsDataType_float :
|
---|
| 775 | fits_read_col(fptr_,TFLOAT,ncol+1,ligneALire,premierElement,1,&fnull,&fdata[fcount++],&anull,&status);
|
---|
[1136] | 776 | break;
|
---|
[1300] | 777 | case FitsDataType_int :
|
---|
[1499] | 778 | fits_read_col(fptr_,TINT,ncol+1,ligneALire,premierElement,1,&inull,&idata[icount++],
|
---|
[1136] | 779 | &anull,&status);
|
---|
| 780 | break;
|
---|
[1499] | 781 | case FitsDataType_long :
|
---|
| 782 | fits_read_col(fptr_,TLONG,ncol+1,ligneALire,premierElement,1,&inull,&idata[icount++], &anull,&status);
|
---|
| 783 | case FitsDataType_byte :
|
---|
| 784 | {
|
---|
| 785 | unsigned char uschar = 0;
|
---|
| 786 | fits_read_col(fptr_,TBYTE,ncol+1,ligneALire,premierElement,1,&inull,&uschar, &anull,&status);
|
---|
| 787 | idata[icount++] = (int)uschar;
|
---|
| 788 | }
|
---|
| 789 | break;
|
---|
[1300] | 790 | case FitsDataType_char :
|
---|
[1499] | 791 | fits_read_col(fptr_,TSTRING,ncol+1,ligneALire,premierElement,1,cnull,&cdata[ccount++],&anull,&status);
|
---|
[1136] | 792 | break;
|
---|
| 793 | }
|
---|
| 794 | if (status)
|
---|
| 795 | {
|
---|
| 796 | ResetStatus(status);
|
---|
| 797 | break;
|
---|
| 798 | }
|
---|
[861] | 799 | }
|
---|
[903] | 800 | }
|
---|
[839] | 801 |
|
---|
[1218] | 802 | /*! \fn void SOPHYA::FitsInFile::GetBinTabLine(long NoLine, BnTblLine& ligne)
|
---|
| 803 | Get the NoLine-th 'line' from the current BINTABLE extension on FITS file,
|
---|
| 804 | */
|
---|
[1193] | 805 | void FitsInFile::GetBinTabLine(long NoLine, BnTblLine& ligne)
|
---|
| 806 | {
|
---|
| 807 | int status= 0;
|
---|
| 808 | int anull;
|
---|
| 809 | double dnull= 0.;
|
---|
| 810 | float fnull= 0.;
|
---|
| 811 | int inull= 0;
|
---|
| 812 | char* cnull= "";
|
---|
| 813 | int dcount = 0.;
|
---|
| 814 | int fcount = 0.;
|
---|
| 815 | int icount = 0;
|
---|
| 816 | int ccount =0;
|
---|
| 817 | int ncol;
|
---|
| 818 | long nels=1;
|
---|
| 819 | for (ncol=0; ncol<nbcols_; ncol++)
|
---|
| 820 | {
|
---|
| 821 | switch (types_[ncol])
|
---|
| 822 | {
|
---|
[1300] | 823 | case FitsDataType_double :
|
---|
[1193] | 824 | fits_read_col(fptr_,TDOUBLE,ncol+1,NoLine+1,1,1,&dnull,&ligne.ddata_[dcount++],&anull,&status);
|
---|
[1300] | 825 | break;
|
---|
| 826 | case FitsDataType_float :
|
---|
[1193] | 827 | fits_read_col(fptr_,TFLOAT,ncol+1,NoLine+1,1,1,&fnull,&ligne.fdata_[fcount++],&anull,&status);
|
---|
| 828 | break;
|
---|
[1300] | 829 | case FitsDataType_int :
|
---|
[1359] | 830 | fits_read_col(fptr_,TINT,ncol+1,NoLine+1,1,1,&inull,&ligne.idata_[icount++], &anull,&status);
|
---|
[1193] | 831 | break;
|
---|
[1359] | 832 | case FitsDataType_long :
|
---|
| 833 | fits_read_col(fptr_,TLONG,ncol+1,NoLine+1,1,1,&inull,&ligne.ldata_[icount++], &anull,&status);
|
---|
| 834 | break;
|
---|
| 835 | case FitsDataType_byte :
|
---|
| 836 | fits_read_col(fptr_,TBYTE,ncol+1,NoLine+1,1,1,&inull,&ligne.bdata_[icount++], &anull,&status);
|
---|
| 837 | break;
|
---|
[1300] | 838 | case FitsDataType_char :
|
---|
[1193] | 839 | char* chaine = new char[taille_des_chaines_[ccount]];
|
---|
| 840 | fits_read_col(fptr_,TSTRING,ncol+1,NoLine+1,1,1,cnull,&chaine,&anull,&status);
|
---|
| 841 | ligne.cdata_[ccount++] = string(chaine);
|
---|
| 842 | break;
|
---|
| 843 | }
|
---|
| 844 | if (status)
|
---|
| 845 | {
|
---|
| 846 | ResetStatus(status);
|
---|
| 847 | break;
|
---|
| 848 | }
|
---|
| 849 | }
|
---|
| 850 | }
|
---|
| 851 |
|
---|
[1218] | 852 | /*! \fn void SOPHYA::FitsInFile::GetBinTabLine(int NoLine, float* fdata)
|
---|
| 853 |
|
---|
| 854 | Get the NoLine-th float 'line' from the current BINTABLE extension on FITS file,
|
---|
| 855 | */
|
---|
[1136] | 856 | void FitsInFile::GetBinTabLine(int NoLine, float* fdata)
|
---|
[903] | 857 | {
|
---|
[1136] | 858 | int status= 0;
|
---|
| 859 | int anull;
|
---|
| 860 | float fnull= 0.;
|
---|
| 861 | long nels=1;
|
---|
| 862 | int ncol;
|
---|
| 863 | for (ncol=0; ncol<nbcols_; ncol++)
|
---|
[861] | 864 | {
|
---|
[1136] | 865 | fits_read_col(fptr_,TFLOAT,ncol+1,NoLine+1,1,1,&fnull,&fdata[ncol],&anull,&status);
|
---|
| 866 | if (status)
|
---|
[903] | 867 | {
|
---|
[1136] | 868 | ResetStatus(status);
|
---|
| 869 | break;
|
---|
[903] | 870 | }
|
---|
[1136] | 871 | }
|
---|
| 872 | }
|
---|
[839] | 873 |
|
---|
[903] | 874 |
|
---|
[1218] | 875 | /*! \fn void SPOPHYA::FitsInFile::GetBinTabFCol(double* valeurs,int nentries, int NoCol) const
|
---|
| 876 |
|
---|
| 877 | fill the array 'valeurs' with double data from the current BINTABLE extension on FITS file, from column number 'NoCol'
|
---|
| 878 |
|
---|
| 879 | \param <nentries> number of data to be read
|
---|
| 880 | */
|
---|
[1379] | 881 | void FitsInFile::GetBinTabFCol(r_8* valeurs,int nentries, int NoCol) const
|
---|
[839] | 882 | {
|
---|
| 883 | int status= 0;
|
---|
| 884 | int DTYPE;
|
---|
| 885 | long repeat,width;
|
---|
| 886 | fits_get_coltype(fptr_, NoCol+1,&DTYPE,&repeat,&width,&status);
|
---|
| 887 | if( DTYPE != TDOUBLE)
|
---|
| 888 | {
|
---|
[1045] | 889 | if (DTYPE == TFLOAT) cout << " WARNING: reading double from float : conversion will be made by fitsio library" << endl;
|
---|
| 890 | else
|
---|
| 891 | throw IOExc("FitsFile::GetBinTabFCol, tentative de lecture non double");
|
---|
[839] | 892 | }
|
---|
| 893 | long nels=nentries;
|
---|
[971] | 894 | int anull;
|
---|
[839] | 895 | // no checking for undefined pixels
|
---|
[971] | 896 | double dnull= 0.;
|
---|
| 897 | // fits_read_key(fptr_,TDOUBLE,"BAD_DATA",&dnull,NULL,&status);
|
---|
| 898 | // if (status != 0)
|
---|
| 899 | // {
|
---|
| 900 | // dnull = -1.6375e30; // default value
|
---|
| 901 | // status = 0;
|
---|
| 902 | // }
|
---|
[1752] | 903 | // if (nentries != nrows_*repeat)
|
---|
| 904 | // {
|
---|
| 905 | // cout << " found " << nentries << " pixels, expected: " << nrows_*repeat << endl;
|
---|
| 906 | // throw PException(" FitsFile:::GetBinTabFCol ");
|
---|
| 907 | // }
|
---|
[839] | 908 | fits_read_col(fptr_,TDOUBLE,NoCol+1,1,1,nels,&dnull,valeurs,
|
---|
| 909 | &anull,&status);
|
---|
[1703] | 910 | if( status )
|
---|
| 911 | {
|
---|
| 912 | printerrorAndContinue( status,"erreur lecture de colonne" );
|
---|
| 913 | }
|
---|
[839] | 914 | }
|
---|
| 915 |
|
---|
[1218] | 916 | /*! \fn void SOPHYA::FitsInFile::GetBinTabFCol(float* valeurs,int nentries, int NoCol) const
|
---|
| 917 |
|
---|
| 918 | same as previous method with float data
|
---|
| 919 | */
|
---|
[1379] | 920 | void FitsInFile::GetBinTabFCol(r_4* valeurs,int nentries, int NoCol) const
|
---|
[839] | 921 | {
|
---|
| 922 | int status= 0;
|
---|
| 923 | int DTYPE;
|
---|
| 924 | long repeat,width;
|
---|
| 925 | fits_get_coltype(fptr_, NoCol+1,&DTYPE,&repeat,&width,&status);
|
---|
| 926 | if( DTYPE != TFLOAT)
|
---|
| 927 | {
|
---|
[1045] | 928 | if (DTYPE == TDOUBLE) cout << " WARNING: reading float from double : conversion will be made by fitsio library" << endl;
|
---|
| 929 | else
|
---|
| 930 | throw IOExc("FitsFile::GetBinTabFCol, tentative de lecture non float");
|
---|
[839] | 931 | }
|
---|
| 932 | long nels=nentries;
|
---|
[971] | 933 | int anull;
|
---|
[839] | 934 | // no checking for undefined pixels
|
---|
| 935 | float fnull= 0.;
|
---|
[971] | 936 | // fits_read_key(fptr_,TFLOAT,"BAD_DATA",&fnull,NULL,&status);
|
---|
| 937 | // if (status != 0)
|
---|
| 938 | // {
|
---|
| 939 | // fnull = -1.6375e30; // default value
|
---|
| 940 | // status = 0;
|
---|
| 941 | // }
|
---|
[1752] | 942 | // if (nentries != nrows_*repeat)
|
---|
| 943 | // {
|
---|
| 944 | // cout << " found " << nentries << " pixels, expected: " << nrows_*repeat << endl;
|
---|
| 945 | // throw PException(" FitsFile:::GetBinTabFCol ");
|
---|
| 946 | // }
|
---|
[839] | 947 | fits_read_col(fptr_,TFLOAT,NoCol+1,1,1,nels,&fnull,valeurs,
|
---|
| 948 | &anull,&status);
|
---|
[1703] | 949 | if( status ) printerrorAndContinue( status,"erreur lecture de colonne" );
|
---|
[839] | 950 | }
|
---|
[1136] | 951 |
|
---|
[1218] | 952 | /*! \fn void SOPHYA::FitsInFile::GetBinTabFCol(int* valeurs,int nentries, int NoCol) const
|
---|
| 953 |
|
---|
| 954 | same as previous method with int data
|
---|
| 955 | */
|
---|
| 956 |
|
---|
[1379] | 957 | void FitsInFile::GetBinTabFCol(int_4* valeurs,int nentries, int NoCol) const
|
---|
[839] | 958 | {
|
---|
| 959 | int status= 0;
|
---|
| 960 | int DTYPE;
|
---|
| 961 | long repeat,width;
|
---|
| 962 | fits_get_coltype(fptr_, NoCol+1,&DTYPE,&repeat,&width,&status);
|
---|
[1752] | 963 | cout << " en lecture fits trouve le type " << DTYPE << endl;
|
---|
| 964 | if( DTYPE != TLONG && DTYPE != TINT)
|
---|
[839] | 965 | {
|
---|
[1752] | 966 | throw IOExc("FitsFile::GetBinTabFCol, probleme de lecture d'entiers");
|
---|
[839] | 967 | }
|
---|
| 968 | long nels=nentries;
|
---|
| 969 | // no checking for undefined pixels
|
---|
| 970 | int anull;
|
---|
| 971 | int inull= 0;
|
---|
[971] | 972 | // fits_read_key(fptr_,TINT,"BAD_DATA",&inull,NULL,&status);
|
---|
| 973 | // if (status != 0)
|
---|
| 974 | // {
|
---|
| 975 | // inull = -999999; // default value
|
---|
| 976 | // status = 0;
|
---|
| 977 | // }
|
---|
[1752] | 978 | // if (nentries != nrows_*repeat)
|
---|
| 979 | // {
|
---|
| 980 | // cout << " found " << nentries << " pixels, expected: " << nrows_*repeat << endl;
|
---|
| 981 | // throw PException(" FitsFile:::GetBinTabFCol ");
|
---|
| 982 | // }
|
---|
| 983 |
|
---|
| 984 |
|
---|
| 985 |
|
---|
| 986 | // voir commentaire dans putColToFits()
|
---|
[839] | 987 | fits_read_col(fptr_,TINT,NoCol+1,1,1,nels,&inull,valeurs,
|
---|
| 988 | &anull,&status);
|
---|
[1703] | 989 | if( status ) printerrorAndContinue( status,"erreur lecture de colonne" );
|
---|
[839] | 990 | }
|
---|
[1136] | 991 |
|
---|
[1218] | 992 | /*! \fn void SOPHYA::FitsInFile::GetBinTabFCol(char** valeurs, int nentries, int NoCol) const
|
---|
| 993 |
|
---|
| 994 | same as previous method with char* data
|
---|
| 995 | */
|
---|
| 996 |
|
---|
[1136] | 997 | void FitsInFile::GetBinTabFCol(char** valeurs, int nentries, int NoCol) const
|
---|
[839] | 998 | {
|
---|
| 999 | int status= 0;
|
---|
| 1000 | int DTYPE;
|
---|
| 1001 | long repeat,width;
|
---|
| 1002 | fits_get_coltype(fptr_, NoCol+1,&DTYPE,&repeat,&width,&status);
|
---|
[1300] | 1003 | if( DTYPE != TSTRING && DTYPE != TBYTE)
|
---|
[839] | 1004 | {
|
---|
[1300] | 1005 | throw IOExc("FitsFile::GetBinTabFCol, tentative de lecture non string");
|
---|
[839] | 1006 | }
|
---|
| 1007 | long nels=nentries;
|
---|
| 1008 | // no checking for undefined pixels
|
---|
| 1009 | int anull;
|
---|
[971] | 1010 | char* cnull= "";
|
---|
[1752] | 1011 | // if (nentries != nrows_*repeat/width)
|
---|
| 1012 | // {
|
---|
| 1013 | // cout << " found " << nentries << " pixels, expected: " << nrows_*repeat/width << endl;
|
---|
| 1014 | // throw PException(" FitsFile:::GetBinTabFCol ");
|
---|
| 1015 | // }
|
---|
[839] | 1016 | long frow=1;
|
---|
| 1017 | long felem=1;
|
---|
| 1018 | fits_read_col(fptr_,TSTRING,NoCol+1,frow,felem,nels,cnull,valeurs,
|
---|
| 1019 | &anull,&status);
|
---|
[1703] | 1020 | if( status ) printerrorAndContinue( status,"erreur lecture de colonne" );
|
---|
[839] | 1021 | }
|
---|
[1045] | 1022 |
|
---|
[1218] | 1023 | /*! \fn void SOPHYA::FitsInFile::GetSingleColumn(double* map, int nentries) const
|
---|
| 1024 | fill the array 'map' with double data from the current extension on FITS file.
|
---|
| 1025 | If the extension is BINTABLE, the first column is provided.
|
---|
| 1026 |
|
---|
| 1027 | \param <nentries> number of data to be read
|
---|
| 1028 | */
|
---|
[1379] | 1029 | void FitsInFile::GetSingleColumn(r_8* map, int nentries) const
|
---|
[1136] | 1030 | {
|
---|
| 1031 | int status = 0;
|
---|
[1334] | 1032 | if(hdutype_ == FitsExtensionType_IMAGE)
|
---|
[1045] | 1033 | {
|
---|
[1136] | 1034 |
|
---|
[1300] | 1035 | if(imageDataType_ != FitsDataType_double)
|
---|
[1047] | 1036 | {
|
---|
[1136] | 1037 | cout << " The data type on fits file is not double...";
|
---|
| 1038 | cout << " Conversion to double achieved by cfitsio lib" << endl;
|
---|
[1047] | 1039 | }
|
---|
[1136] | 1040 |
|
---|
| 1041 | // no checking for undefined pixels
|
---|
| 1042 | int anull;
|
---|
| 1043 | double dnull= 0.;
|
---|
| 1044 |
|
---|
| 1045 | long nels= nentries;
|
---|
| 1046 | fits_read_img(fptr_,TDOUBLE,1,nels,&dnull,map,&anull,&status);
|
---|
| 1047 | if( status ) printerror( status );
|
---|
[1045] | 1048 | }
|
---|
[1136] | 1049 | else
|
---|
[1334] | 1050 | if(hdutype_ == FitsExtensionType_ASCII_TBL || hdutype_ == FitsExtensionType_BINARY_TBL)
|
---|
[1136] | 1051 | {
|
---|
| 1052 | GetBinTabFCol(map,nentries, 0);
|
---|
| 1053 | }
|
---|
| 1054 | else
|
---|
| 1055 | {
|
---|
[1379] | 1056 | cout << " hdutype= " << (int) hdutype_ << endl;
|
---|
[1334] | 1057 | throw IOExc("FitsFile::GetSingleColumn, this HDU is unknown");
|
---|
[1136] | 1058 | }
|
---|
[1045] | 1059 | }
|
---|
| 1060 |
|
---|
[1218] | 1061 | /*! \fn void SOPHYA::FitsInFile::GetSingleColumn(float* map, int nentries) const
|
---|
| 1062 | same as above with float data
|
---|
| 1063 | */
|
---|
[1379] | 1064 | void FitsInFile::GetSingleColumn(r_4* map, int nentries) const
|
---|
[1045] | 1065 | {
|
---|
[1136] | 1066 | int status = 0;
|
---|
[1334] | 1067 | if(hdutype_ == FitsExtensionType_IMAGE)
|
---|
[1045] | 1068 | {
|
---|
[1300] | 1069 | if(imageDataType_ != FitsDataType_float)
|
---|
[1047] | 1070 | {
|
---|
[1136] | 1071 | cout << " The data type on fits file is not float ";
|
---|
| 1072 | cout << " Conversion to float achieved by cfitsio lib" << endl;
|
---|
[1047] | 1073 | }
|
---|
[1136] | 1074 | // no checking for undefined pixels
|
---|
| 1075 | int anull;
|
---|
| 1076 | float fnull= 0.;
|
---|
| 1077 |
|
---|
| 1078 | long nels= nentries;
|
---|
| 1079 | fits_read_img(fptr_,TFLOAT,1,nels,&fnull, map,&anull,&status);
|
---|
| 1080 | if( status ) printerror( status );
|
---|
[1045] | 1081 | }
|
---|
[839] | 1082 | else
|
---|
[1334] | 1083 | if(hdutype_ == FitsExtensionType_ASCII_TBL || hdutype_ == FitsExtensionType_BINARY_TBL)
|
---|
[1136] | 1084 | {
|
---|
| 1085 | GetBinTabFCol(map,nentries, 0);
|
---|
| 1086 | }
|
---|
[839] | 1087 | else
|
---|
| 1088 | {
|
---|
[1379] | 1089 | cout << " hdutype= " << (int) hdutype_ << endl;
|
---|
[1136] | 1090 | throw IOExc("FitsFile::GetSingleColumn this HDU is unknown");
|
---|
[839] | 1091 | }
|
---|
| 1092 | }
|
---|
| 1093 |
|
---|
[1218] | 1094 | /*! \fn void SOPHYA::FitsInFile::GetSingleColumn( int* map, int nentries) const
|
---|
| 1095 | same as above with int data
|
---|
| 1096 | */
|
---|
[1379] | 1097 | void FitsInFile::GetSingleColumn( int_4* map, int nentries) const
|
---|
[839] | 1098 | {
|
---|
[1136] | 1099 | int status = 0;
|
---|
[1334] | 1100 | if(hdutype_ == FitsExtensionType_IMAGE)
|
---|
[839] | 1101 | {
|
---|
[1300] | 1102 | if(imageDataType_ != FitsDataType_int)
|
---|
[1136] | 1103 | {
|
---|
| 1104 | cout << " The data type on fits file is not int ";
|
---|
| 1105 | cout << " Conversion to float achieved by cfitsio lib" << endl;
|
---|
| 1106 | }
|
---|
| 1107 | // no checking for undefined pixels
|
---|
| 1108 | int anull;
|
---|
| 1109 | float fnull= 0.;
|
---|
| 1110 |
|
---|
| 1111 | long nels= nentries;
|
---|
| 1112 | fits_read_img(fptr_,TINT,1,nels,&fnull,map,&anull,&status);
|
---|
| 1113 | if( status ) printerror( status );
|
---|
[839] | 1114 | }
|
---|
| 1115 | else
|
---|
[1334] | 1116 | if(hdutype_ == FitsExtensionType_ASCII_TBL || hdutype_ == FitsExtensionType_BINARY_TBL)
|
---|
[1136] | 1117 | {
|
---|
| 1118 | GetBinTabFCol(map,nentries, 0);
|
---|
| 1119 | }
|
---|
[839] | 1120 | else
|
---|
[1136] | 1121 | {
|
---|
[1379] | 1122 | cout << " hdutype= " << (int) hdutype_ << endl;
|
---|
[1136] | 1123 | throw IOExc("FitsFile::GetSingleColumn this HDU is unknown");
|
---|
| 1124 | }
|
---|
[839] | 1125 | }
|
---|
| 1126 |
|
---|
[1136] | 1127 | void FitsInFile::GetBinTabParameters(fitsfile* fileptr, int& nbcols, int& nrows,
|
---|
[903] | 1128 | vector<int>& repeat,
|
---|
| 1129 | vector<string>& noms,
|
---|
[1300] | 1130 | vector<FitsDataType>& types,
|
---|
[903] | 1131 | vector<int>& taille_des_chaines)
|
---|
[839] | 1132 | {
|
---|
| 1133 | int status= 0;
|
---|
[903] | 1134 | int hdunum=0;
|
---|
| 1135 | int hdutype=0;
|
---|
| 1136 | fits_get_hdu_num(fileptr,&hdunum);
|
---|
| 1137 | fits_get_hdu_type(fileptr, &hdutype, &status);
|
---|
| 1138 |
|
---|
| 1139 | if(hdutype != ASCII_TBL && hdutype != BINARY_TBL)
|
---|
[839] | 1140 | {
|
---|
[903] | 1141 | throw IOExc("FitsFile::GetBinTabParameters this HDU is not an ASCII table nor a binary table");
|
---|
[839] | 1142 | }
|
---|
[1334] | 1143 | // if(hdutype == ASCII_TBL)
|
---|
| 1144 | // cout << " Reading a FITS ascii table in HDU : " << hdunum << endl;
|
---|
| 1145 | // if(hdutype == BINARY_TBL)
|
---|
| 1146 | // cout << " Reading a FITS binary table in HDU : " << hdunum << endl;
|
---|
[839] | 1147 |
|
---|
| 1148 | // get the number of columns
|
---|
[903] | 1149 | fits_get_num_cols(fileptr, &nbcols,&status);
|
---|
[839] | 1150 | if( status ) printerror( status );
|
---|
| 1151 |
|
---|
| 1152 | // get the number of rows
|
---|
| 1153 | long naxis2= 0;
|
---|
[903] | 1154 | fits_get_num_rows(fileptr,&naxis2,&status);
|
---|
[839] | 1155 | if( status ) printerror( status );
|
---|
[903] | 1156 | nrows = (int)naxis2;
|
---|
[839] | 1157 |
|
---|
| 1158 | // get the datatype, names and the repeat count
|
---|
[903] | 1159 | noms.clear();
|
---|
| 1160 | noms.reserve(nbcols);
|
---|
| 1161 | types.clear();
|
---|
| 1162 | types.reserve(nbcols);
|
---|
| 1163 | repeat.clear();
|
---|
| 1164 | repeat.reserve(nbcols);
|
---|
| 1165 | taille_des_chaines.clear();
|
---|
[839] | 1166 | char **ttype = new char*[nbcols];
|
---|
[923] | 1167 | int ii;
|
---|
[1175] | 1168 | //
|
---|
| 1169 | //
|
---|
[923] | 1170 | for (ii=0; ii < nbcols; ii++) ttype[ii]=new char[FLEN_VALUE];
|
---|
[839] | 1171 | int nfound;
|
---|
[903] | 1172 | fits_read_keys_str(fileptr, "TTYPE",1,nbcols,ttype,&nfound, &status);
|
---|
[839] | 1173 | if( status ) printerror( status,"erreur lecture des noms de colonne");
|
---|
| 1174 | int rept=0;
|
---|
[1300] | 1175 | if(hdutype == ASCII_TBL)
|
---|
[839] | 1176 | {
|
---|
[1300] | 1177 | for(ii = 0; ii < nbcols; ii++)
|
---|
[839] | 1178 | {
|
---|
[1300] | 1179 | int DTYPE;
|
---|
| 1180 | long width;
|
---|
| 1181 | long repete = 0;
|
---|
| 1182 | fits_get_coltype(fileptr,ii+1,&DTYPE,&repete,&width,&status);
|
---|
| 1183 | if( status ) printerror( status,"erreur lecture type de colonne");
|
---|
| 1184 | rept = repete;
|
---|
| 1185 | noms.push_back(string(ttype[ii]));
|
---|
| 1186 | switch (DTYPE)
|
---|
| 1187 | {
|
---|
| 1188 | case TDOUBLE :
|
---|
| 1189 | types.push_back(FitsDataType_double);
|
---|
| 1190 | break;
|
---|
| 1191 | case TFLOAT :
|
---|
| 1192 | types.push_back(FitsDataType_float);
|
---|
| 1193 | break;
|
---|
| 1194 | case TLONG :
|
---|
[1359] | 1195 | types.push_back(FitsDataType_long);
|
---|
[1300] | 1196 | break;
|
---|
| 1197 | case TSHORT :
|
---|
| 1198 | types.push_back(FitsDataType_int);
|
---|
| 1199 | break;
|
---|
| 1200 | case TSTRING :
|
---|
| 1201 | types.push_back(FitsDataType_char);
|
---|
| 1202 | taille_des_chaines.push_back(width);
|
---|
| 1203 | rept/=width;
|
---|
| 1204 | break;
|
---|
| 1205 | default :
|
---|
| 1206 | cout << " field " << ii+1 << " DTYPE= " << DTYPE << endl;
|
---|
| 1207 | throw IOExc("FitsFile::GetBinTabParameters, unsupported data type of field, for ASCII table");
|
---|
| 1208 | }
|
---|
| 1209 | repeat.push_back(rept);
|
---|
[839] | 1210 | }
|
---|
[1136] | 1211 | }
|
---|
[1300] | 1212 | else
|
---|
| 1213 | {
|
---|
| 1214 | for(ii = 0; ii < nbcols; ii++)
|
---|
| 1215 | {
|
---|
| 1216 | int DTYPE;
|
---|
| 1217 | long width;
|
---|
| 1218 | long repete = 0;
|
---|
| 1219 | fits_get_coltype(fileptr,ii+1,&DTYPE,&repete,&width,&status);
|
---|
| 1220 | if( status ) printerror( status,"erreur lecture type de colonne");
|
---|
| 1221 | rept = repete;
|
---|
| 1222 | noms.push_back(string(ttype[ii]));
|
---|
| 1223 | switch (DTYPE)
|
---|
| 1224 | {
|
---|
| 1225 | case TDOUBLE :
|
---|
| 1226 | types.push_back(FitsDataType_double);
|
---|
| 1227 | break;
|
---|
| 1228 | case TFLOAT :
|
---|
| 1229 | types.push_back(FitsDataType_float);
|
---|
| 1230 | break;
|
---|
| 1231 | case TLONG :
|
---|
[1359] | 1232 | types.push_back(FitsDataType_long);
|
---|
[1300] | 1233 | break;
|
---|
| 1234 | case TINT :
|
---|
| 1235 | types.push_back(FitsDataType_int);
|
---|
| 1236 | break;
|
---|
| 1237 | case TSHORT :
|
---|
| 1238 | types.push_back(FitsDataType_int);
|
---|
| 1239 | break;
|
---|
| 1240 | case TSTRING :
|
---|
| 1241 | types.push_back(FitsDataType_char);
|
---|
| 1242 | taille_des_chaines.push_back(width);
|
---|
| 1243 | rept/=width;
|
---|
| 1244 | break;
|
---|
| 1245 | case TBYTE :
|
---|
[1359] | 1246 | types.push_back(FitsDataType_byte);
|
---|
[1300] | 1247 | break;
|
---|
| 1248 | default :
|
---|
| 1249 | cout << " field " << ii+1 << " DTYPE= " << DTYPE << endl;
|
---|
| 1250 | throw IOExc("FitsFile::GetBinTabParameters, unsupported data type of field, for BINTABLE");
|
---|
| 1251 | }
|
---|
| 1252 | repeat.push_back(rept);
|
---|
| 1253 | }
|
---|
| 1254 | }
|
---|
[1136] | 1255 | for (ii=0; ii < nbcols; ii++) delete [] ttype[ii];
|
---|
| 1256 | delete [] ttype;
|
---|
| 1257 | }
|
---|
| 1258 |
|
---|
| 1259 | void FitsInFile::KeywordsIntoDVList(fitsfile* fileptr, DVList& dvl, int hdunum)
|
---|
| 1260 | {
|
---|
| 1261 | int status = 0;
|
---|
| 1262 | int hdutype;
|
---|
| 1263 | fits_movabs_hdu(fileptr,hdunum,&hdutype,&status);
|
---|
| 1264 | if( status ) printerror( status,":KeywordsIntoDVList : erreur movabs");
|
---|
| 1265 | // get number of keywords
|
---|
| 1266 | int nkeys,keypos;
|
---|
| 1267 | fits_get_hdrpos(fileptr,&nkeys,&keypos,&status);
|
---|
| 1268 | if( status ) printerror( status );
|
---|
| 1269 |
|
---|
| 1270 | // put keywords in a DVList object
|
---|
| 1271 | char keyname[LEN_KEYWORD]= "";
|
---|
| 1272 | char strval[FLEN_VALUE]= "";
|
---|
| 1273 | char dtype;
|
---|
| 1274 | char card[FLEN_CARD];
|
---|
| 1275 | char *comkey = "COMMENT";
|
---|
[1143] | 1276 | char comment[FLEN_COMMENT];
|
---|
[1136] | 1277 |
|
---|
| 1278 | // shift with the number of mandatory keywords
|
---|
[1143] | 1279 | // int num= 8;
|
---|
| 1280 | int num= 0;
|
---|
| 1281 | // primary header
|
---|
| 1282 | if (hdunum == 1)
|
---|
| 1283 | {
|
---|
| 1284 | // read NAXIS
|
---|
| 1285 | int naxis=0;
|
---|
| 1286 | fits_read_key(fileptr,TINT,"NAXIS",&naxis,NULL,&status);
|
---|
| 1287 | // number of mandatory keywords
|
---|
| 1288 | num = naxis+3;
|
---|
| 1289 | }
|
---|
| 1290 | // extensions
|
---|
| 1291 | else
|
---|
| 1292 | {
|
---|
| 1293 | if (hdutype == IMAGE_HDU)
|
---|
| 1294 | {
|
---|
| 1295 | // read NAXIS
|
---|
| 1296 | int naxis=0;
|
---|
| 1297 | fits_read_key(fileptr,TINT,"NAXIS",&naxis,NULL,&status);
|
---|
| 1298 | // number of mandatory keywords
|
---|
| 1299 | num = naxis+5;
|
---|
| 1300 | }
|
---|
| 1301 | else
|
---|
| 1302 | if(hdutype == ASCII_TBL || hdutype == BINARY_TBL)
|
---|
| 1303 | {
|
---|
| 1304 | // number of mandatory keywords
|
---|
| 1305 | num = 8;
|
---|
| 1306 | }
|
---|
| 1307 | }
|
---|
[1136] | 1308 | int j;
|
---|
| 1309 | for(j = num+1; j <= nkeys; j++)
|
---|
| 1310 | {
|
---|
| 1311 | fits_read_keyn(fileptr,j,card,strval,NULL,&status);
|
---|
| 1312 | if(status) printerror(status);
|
---|
| 1313 |
|
---|
| 1314 | strncpy(keyname,card,LEN_KEYWORD-1);
|
---|
| 1315 | if(strncmp(keyname,comkey,LEN_KEYWORD-1) != 0 && strlen(keyname) != 0
|
---|
| 1316 | && strlen(strval) != 0)
|
---|
| 1317 | {
|
---|
| 1318 | fits_get_keytype(strval,&dtype,&status);
|
---|
| 1319 | if(status) printerror(status);
|
---|
| 1320 |
|
---|
| 1321 | strip(keyname, 'B',' ');
|
---|
| 1322 | strip(strval, 'B',' ');
|
---|
| 1323 | strip(strval, 'B','\'');
|
---|
| 1324 |
|
---|
| 1325 | switch( dtype )
|
---|
| 1326 | {
|
---|
| 1327 | case 'C':
|
---|
[1143] | 1328 | fits_read_key(fileptr,TSTRING,keyname,strval,comment,&status);
|
---|
| 1329 | dvl[keyname]= strval;
|
---|
| 1330 | dvl.SetComment(keyname, comment);
|
---|
[1136] | 1331 | break;
|
---|
| 1332 | case 'I':
|
---|
| 1333 | int ival;
|
---|
[1143] | 1334 | fits_read_key(fileptr,TINT,keyname,&ival,comment,&status);
|
---|
[1136] | 1335 | dvl[keyname]= (int_4) ival; // Portage mac DY
|
---|
[1143] | 1336 | dvl.SetComment(keyname, comment);
|
---|
[1136] | 1337 | break;
|
---|
| 1338 | case 'L':
|
---|
| 1339 | int ilog;
|
---|
[1143] | 1340 | fits_read_key(fileptr,TLOGICAL,keyname,&ilog,comment,&status);
|
---|
[1136] | 1341 | dvl[keyname]= (int_4) ilog;
|
---|
[1143] | 1342 | dvl.SetComment(keyname, comment);
|
---|
[1136] | 1343 | break;
|
---|
| 1344 | case 'F':
|
---|
| 1345 | double dval;
|
---|
[1143] | 1346 | fits_read_key(fileptr,TDOUBLE,keyname,&dval,comment,&status);
|
---|
[1136] | 1347 | dvl[keyname]= dval;
|
---|
[1143] | 1348 | dvl.SetComment(keyname, comment);
|
---|
[1136] | 1349 | break;
|
---|
| 1350 | }
|
---|
| 1351 |
|
---|
| 1352 | }
|
---|
[839] | 1353 | }
|
---|
[1136] | 1354 | // dvl_.Print();
|
---|
| 1355 | }
|
---|
| 1356 |
|
---|
[1218] | 1357 |
|
---|
| 1358 | /*!
|
---|
| 1359 | \class SOPHYA::FitsOutFile
|
---|
[1371] | 1360 | \ingroup FitsIOServer
|
---|
[1218] | 1361 | Class for loading SOPHYA objects from FITS Format Files (uses cfitsio lib)
|
---|
| 1362 | */
|
---|
| 1363 |
|
---|
[1136] | 1364 | FitsOutFile::FitsOutFile()
|
---|
| 1365 | {
|
---|
[1193] | 1366 | InitNull();
|
---|
[903] | 1367 | }
|
---|
[839] | 1368 |
|
---|
[1218] | 1369 | /*! \fn SOPHYA::FitsOutFile::FitsOutFile(char flnm[], WriteMode wrm)
|
---|
| 1370 |
|
---|
| 1371 | \param <WriteMode> enum , WriteMode = clear -> if alreadyy exists, the file will be overwritten (else created) ; WriteMode = append -> further objects will be appended to the file if it exists (else : file created). WriteMode = unknown -> file created if does not exist, else : exception. (the last situation is the default)
|
---|
| 1372 |
|
---|
| 1373 | */
|
---|
[1231] | 1374 |
|
---|
| 1375 | FitsOutFile::FitsOutFile(string const & flnm, WriteMode wrm)
|
---|
[1136] | 1376 | {
|
---|
[1231] | 1377 | InitNull();
|
---|
| 1378 | openoutputfitsfile(flnm.c_str(), wrm);
|
---|
| 1379 | }
|
---|
[839] | 1380 |
|
---|
[1231] | 1381 | FitsOutFile::FitsOutFile(const char * flnm, WriteMode wrm)
|
---|
| 1382 | {
|
---|
[1136] | 1383 | InitNull();
|
---|
[1231] | 1384 | openoutputfitsfile(flnm, wrm);
|
---|
| 1385 | }
|
---|
| 1386 |
|
---|
| 1387 | void FitsOutFile::openoutputfitsfile(const char * flnm, WriteMode wrm)
|
---|
| 1388 | {
|
---|
[1136] | 1389 | int status = 0;
|
---|
[839] | 1390 |
|
---|
[1136] | 1391 | // create new FITS file
|
---|
[1183] | 1392 | fits_create_file(&fptr_,flnm,&status);
|
---|
| 1393 | if( status )
|
---|
[1136] | 1394 | {
|
---|
[1193] | 1395 |
|
---|
| 1396 | switch (wrm)
|
---|
| 1397 | {
|
---|
[1183] | 1398 | // si on veut ecrire a la fin de ce fichier
|
---|
[1193] | 1399 | case append :
|
---|
[1183] | 1400 | status = 0;
|
---|
[1235] | 1401 | fits_clear_errmsg();
|
---|
[1183] | 1402 | fits_open_file(&fptr_,flnm,READWRITE,&status);
|
---|
| 1403 | if( status )
|
---|
| 1404 | {
|
---|
| 1405 | cout << " error opening file: " << flnm << endl;
|
---|
| 1406 | printerror(status, "failure opening a file supposed to exist");
|
---|
| 1407 | }
|
---|
| 1408 | else cout << " file " << flnm << " opened, new objects will be appended " << endl;
|
---|
| 1409 | fits_get_num_hdus(fptr_, &hdunum_, &status);
|
---|
| 1410 | int hdutype;
|
---|
| 1411 | fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
|
---|
| 1412 | if( status ) printerror( status,":FitsFile::WriteF : erreur movabs");
|
---|
[1193] | 1413 | break;
|
---|
| 1414 |
|
---|
| 1415 | case clear :
|
---|
[1183] | 1416 | {
|
---|
| 1417 | status = 0;
|
---|
[1235] | 1418 | fits_clear_errmsg();
|
---|
[1183] | 1419 | char* newname = new char[strlen(flnm)+1];
|
---|
| 1420 | //
|
---|
| 1421 | newname[0] = '!';
|
---|
| 1422 | newname[1] = '\0';
|
---|
| 1423 | strcat(newname, flnm);
|
---|
| 1424 | fits_create_file(&fptr_,newname,&status);
|
---|
[1193] | 1425 | delete [] newname;
|
---|
[1183] | 1426 | if (status)
|
---|
| 1427 | {
|
---|
| 1428 | cout << " error opening file: " << flnm << endl;
|
---|
| 1429 | printerror(status, "unable to open file, supposed to exist");
|
---|
| 1430 | }
|
---|
[1193] | 1431 | else cout << " WARNING : file " << flnm << " is overwritten " << endl;
|
---|
| 1432 | break;
|
---|
[1183] | 1433 | }
|
---|
[1193] | 1434 | case unknown :
|
---|
| 1435 | printerror(status, " file seems already to exist");
|
---|
| 1436 | break;
|
---|
[1183] | 1437 |
|
---|
[1193] | 1438 | }
|
---|
[1136] | 1439 | }
|
---|
| 1440 | }
|
---|
| 1441 |
|
---|
| 1442 |
|
---|
| 1443 |
|
---|
[1218] | 1444 | /*! \fn void SOPHYA::FitsOutFile::makeHeaderImageOnFits(char type, int nbdim, int* naxisn, DVList &dvl)
|
---|
| 1445 |
|
---|
| 1446 | create an IMAGE header on FITS file.
|
---|
| 1447 | \param <type> type of data (see method ColTypeFromFits)
|
---|
| 1448 | \param <nbdim> number of dimensions : 1D, 2D, 3D etc. = NAXIS
|
---|
| 1449 | \param <naxisn> array containind sizes of the different dimensions
|
---|
| 1450 | */
|
---|
[1221] | 1451 | void FitsOutFile::makeHeaderImageOnFits(char type, int nbdim, int* naxisn, DVList* ptr_dvl)
|
---|
[1136] | 1452 | {
|
---|
| 1453 | int status = 0;
|
---|
| 1454 | long naxis = nbdim;
|
---|
| 1455 | long* naxes = new long[nbdim];
|
---|
[1246] | 1456 | bool hdunfirst= (hdunum_ == 0);
|
---|
| 1457 | if (hdunfirst)
|
---|
[1136] | 1458 | {
|
---|
[1143] | 1459 | if (imageOnPrimary_ == false)
|
---|
| 1460 | {
|
---|
[1234] | 1461 | hdunum_ = 1;
|
---|
[1143] | 1462 | fits_create_img(fptr_,FLOAT_IMG,0,naxes,&status);
|
---|
[1246] | 1463 | }
|
---|
[1136] | 1464 | }
|
---|
| 1465 | int k;
|
---|
| 1466 | for (k=0; k< nbdim; k++) naxes[k] = (long)naxisn[k];
|
---|
| 1467 | if (type == 'D')
|
---|
| 1468 | fits_create_img(fptr_,DOUBLE_IMG,naxis,naxes,&status);
|
---|
| 1469 | else
|
---|
| 1470 | if (type == 'E')
|
---|
| 1471 | fits_create_img(fptr_,FLOAT_IMG,naxis,naxes,&status);
|
---|
| 1472 | else
|
---|
| 1473 | if (type == 'I')
|
---|
| 1474 | fits_create_img(fptr_,LONG_IMG,naxis,naxes,&status);
|
---|
| 1475 | else
|
---|
| 1476 | {
|
---|
| 1477 | cout << " type of data: " << type << endl;
|
---|
| 1478 | throw PException("FitsFile:::makeHeaderImageOnFits:unprogrammed type of data ");
|
---|
| 1479 | }
|
---|
[1353] | 1480 |
|
---|
[1246] | 1481 | // on ajoute eventuellement un dvlist prepare et la doc SOPHYA
|
---|
[1136] | 1482 | hdunum_++;
|
---|
[1246] | 1483 | if (hdunfirst)
|
---|
| 1484 | {
|
---|
| 1485 | addDVListOnPrimary();
|
---|
| 1486 | writeSignatureOnFits(1);
|
---|
| 1487 | }
|
---|
[1143] | 1488 |
|
---|
[1353] | 1489 | // header format FITS
|
---|
| 1490 |
|
---|
| 1491 | writeAppendedHeaderOnFits();
|
---|
| 1492 |
|
---|
| 1493 | // write supplementary keywords (from SOPHYA)
|
---|
[1143] | 1494 | // dvl.Print();
|
---|
[1221] | 1495 | if (ptr_dvl != NULL) addKeywordsOfDVList(*ptr_dvl);
|
---|
[1143] | 1496 |
|
---|
[1136] | 1497 | delete [] naxes;
|
---|
| 1498 | if( status ) printerror( status, "erreur creation HDU IMAGE" );
|
---|
| 1499 |
|
---|
| 1500 | }
|
---|
[1218] | 1501 |
|
---|
| 1502 |
|
---|
| 1503 | /*! \fn void SOPHYA::FitsOutFile::PutImageToFits(int nbData, double* map) const
|
---|
| 1504 |
|
---|
| 1505 | write double data from array 'map'on an IMAGE extension
|
---|
| 1506 | \param <nbData> number of data to be written
|
---|
| 1507 | */
|
---|
[1379] | 1508 | void FitsOutFile::PutImageToFits(int nbData, r_8* map) const
|
---|
[1136] | 1509 | {
|
---|
| 1510 | int status = 0;
|
---|
| 1511 | long npix= nbData;
|
---|
| 1512 | fits_write_img(fptr_,TDOUBLE,1,npix,map,&status);
|
---|
[1209] | 1513 | if( status ) printerror( status, "erreur ecriture PutImageToFits" );
|
---|
[1136] | 1514 | }
|
---|
| 1515 |
|
---|
[1218] | 1516 | /*! \fn void SOPHYA::FitsOutFile::PutImageToFits(int nbData, float* map) const
|
---|
| 1517 |
|
---|
| 1518 | same as previous method with float data
|
---|
| 1519 | */
|
---|
[1379] | 1520 | void FitsOutFile::PutImageToFits(int nbData, r_4* map) const
|
---|
[1136] | 1521 | {
|
---|
| 1522 | int status = 0;
|
---|
| 1523 | long npix= nbData;
|
---|
| 1524 | fits_write_img(fptr_,TFLOAT,1,npix, map,&status);
|
---|
[1209] | 1525 | if( status ) printerror( status, "erreur ecriture PutImageToFits" );
|
---|
[1136] | 1526 |
|
---|
| 1527 | }
|
---|
[1218] | 1528 |
|
---|
| 1529 | /*! \fn void SOPHYA::FitsOutFile::PutImageToFits( int nbData, int* map) const
|
---|
| 1530 |
|
---|
| 1531 | same as previous method with int data */
|
---|
[1379] | 1532 | void FitsOutFile::PutImageToFits( int nbData, int_4* map) const
|
---|
[1136] | 1533 | {
|
---|
| 1534 | int status = 0;
|
---|
| 1535 |
|
---|
| 1536 | long npix= nbData;
|
---|
| 1537 | fits_write_img(fptr_,TINT,1,npix,map,&status);
|
---|
[1209] | 1538 | if( status ) printerror( status, "erreur ecriture PutImageToFits" );
|
---|
[1136] | 1539 | }
|
---|
| 1540 |
|
---|
| 1541 |
|
---|
| 1542 |
|
---|
[1218] | 1543 | /*! \fn void SOPHYA::FitsOutFile::makeHeaderBntblOnFits( string fieldType, vector<string> Noms, int nentries, int tfields, DVList &dvl, string extname, vector<int> taille_des_chaines)
|
---|
| 1544 |
|
---|
| 1545 | create an BINTABLE header on FITS file.
|
---|
| 1546 | \param <fieldType> array conta
|
---|
| 1547 | ining characters denoting types of the different column (see method ColTypeFromFits)
|
---|
| 1548 | \param <Noms> array of the names of columns
|
---|
| 1549 | \param <nentries> number of data of each column
|
---|
| 1550 | \param <tfields> number of columns
|
---|
| 1551 | \param <dvl> a SOPHYA DVList containing keywords to be appended
|
---|
| 1552 | \param <extname> keyword EXTNAME for FITS file
|
---|
| 1553 | \param <taille_des_chaines> vector containing the number of characters of data for each char* typed column, with order of appearance in 'fieldType'
|
---|
| 1554 | */
|
---|
[1300] | 1555 | void FitsOutFile::makeHeaderBntblOnFits(string fieldType, vector<string> Noms, int nentries, int tfields, DVList* ptr_dvl, string extname, vector<int> taille_des_chaines)
|
---|
[839] | 1556 | {
|
---|
[1209] | 1557 | int k;
|
---|
[839] | 1558 | int status = 0;
|
---|
| 1559 | long nrows;
|
---|
[1300] | 1560 | // verifications de coherences
|
---|
[1209] | 1561 |
|
---|
[1193] | 1562 | if (fieldType.length() != tfields)
|
---|
[839] | 1563 | {
|
---|
[1193] | 1564 | cout << " nombre de champs :" << tfields << "nombre de types: " << fieldType.length() << endl;
|
---|
[1136] | 1565 | throw ParmError("FitsFile:: fields and types don't match");
|
---|
[839] | 1566 |
|
---|
| 1567 | }
|
---|
[1209] | 1568 | if (tfields > Noms.size())
|
---|
| 1569 | {
|
---|
| 1570 | cout << " WARNING: FitsOutFile::makeHeaderBntblOnFits, length of vector of column names not equal to total number of columns" << endl;
|
---|
| 1571 | for (k=0; k<(tfields-Noms.size()); k++) Noms.push_back( string(" "));
|
---|
| 1572 | }
|
---|
| 1573 |
|
---|
| 1574 | // nombre de variables "chaines de caracteres"
|
---|
| 1575 | int nbString = 0;
|
---|
| 1576 | for (k=0; k<tfields;k++) if (fieldType[k] == 'A') nbString++;
|
---|
| 1577 | // coherence de la longueur du vecteur des tailles
|
---|
| 1578 | if (nbString > taille_des_chaines.size())
|
---|
| 1579 | {
|
---|
| 1580 | cout << " WARNING: FitsOutFile::makeHeaderBntblOnFits, length of vector of string lengths not equal to total number of columns" << endl;
|
---|
| 1581 | int strSz=0;
|
---|
| 1582 | for (k=0; k<taille_des_chaines.size(); k++) if ( taille_des_chaines[k] > strSz) strSz = taille_des_chaines[k];
|
---|
| 1583 | for (k=0; k<(nbString-taille_des_chaines.size()); k++) taille_des_chaines.push_back(strSz);
|
---|
| 1584 | }
|
---|
[839] | 1585 | char ** ttype= new char*[tfields];
|
---|
| 1586 | char ** tform= new char*[tfields];
|
---|
| 1587 | char largeur[FLEN_VALUE];
|
---|
| 1588 | int noColString=0;
|
---|
[971] | 1589 | for (k=0; k<tfields;k++)
|
---|
[839] | 1590 | {
|
---|
| 1591 | char format[FLEN_VALUE];
|
---|
| 1592 |
|
---|
| 1593 | if(nentries < 1024)
|
---|
| 1594 | {
|
---|
| 1595 | nrows= nentries;
|
---|
| 1596 | if (fieldType[k] == 'A')
|
---|
| 1597 | {
|
---|
| 1598 | sprintf(largeur,"%d",taille_des_chaines[noColString++]);
|
---|
| 1599 | strcpy(format,largeur);
|
---|
| 1600 | }
|
---|
| 1601 | else strcpy(format,"1");
|
---|
| 1602 | }
|
---|
| 1603 | else
|
---|
| 1604 | {
|
---|
| 1605 | nrows = nentries/1024;
|
---|
| 1606 | if(nentries%1024 != 0) nrows++;
|
---|
| 1607 | if (fieldType[k] == 'A')
|
---|
| 1608 | {
|
---|
[1136] | 1609 | char largaux[FLEN_VALUE];
|
---|
| 1610 | sprintf(largeur,"%d",taille_des_chaines[noColString]);
|
---|
| 1611 | sprintf(largaux,"%d",1024*taille_des_chaines[noColString]);
|
---|
| 1612 | noColString++;
|
---|
| 1613 | strcpy(format, largaux);
|
---|
[839] | 1614 | }
|
---|
| 1615 | else strcpy(format,"1024");
|
---|
| 1616 | }
|
---|
| 1617 | strncat(format,&fieldType[k],1);
|
---|
| 1618 | if (fieldType[k] == 'A')
|
---|
| 1619 | {
|
---|
| 1620 | strcat(format,largeur);
|
---|
| 1621 | }
|
---|
[1193] | 1622 | ttype[k] = const_cast<char*>(Noms[k].c_str());
|
---|
[839] | 1623 | tform[k]= new char[FLEN_VALUE];
|
---|
| 1624 | strcpy(tform[k],format);
|
---|
| 1625 | }
|
---|
[1193] | 1626 | char* extn = const_cast<char*>(extname.c_str());
|
---|
[839] | 1627 |
|
---|
| 1628 | // create a new empty binary table onto the FITS file
|
---|
| 1629 | // physical units if they exist, are defined in the DVList object
|
---|
| 1630 | // so the NULL pointer is given for the tunit parameters.
|
---|
| 1631 | nrows=0;
|
---|
| 1632 | fits_create_tbl(fptr_,BINARY_TBL,nrows,tfields,ttype,tform,
|
---|
| 1633 | NULL,extn,&status);
|
---|
| 1634 | if( status ) printerror( status );
|
---|
[1353] | 1635 |
|
---|
| 1636 | int ii;
|
---|
| 1637 | for(ii = 0; ii < tfields; ii++)
|
---|
| 1638 | {
|
---|
| 1639 | delete [] tform[ii];
|
---|
| 1640 | }
|
---|
| 1641 | delete [] ttype;
|
---|
| 1642 | delete [] tform;
|
---|
| 1643 |
|
---|
| 1644 | // on ajoute eventuellement des mots-cles
|
---|
| 1645 |
|
---|
[1246] | 1646 | if ( hdunum_ == 0 )
|
---|
| 1647 | {
|
---|
| 1648 | hdunum_ = 2;
|
---|
| 1649 | addDVListOnPrimary();
|
---|
| 1650 | writeSignatureOnFits(1);
|
---|
| 1651 | }
|
---|
[1026] | 1652 | else hdunum_++;
|
---|
[1353] | 1653 |
|
---|
| 1654 | // header format FITS
|
---|
| 1655 |
|
---|
| 1656 | writeAppendedHeaderOnFits();
|
---|
| 1657 |
|
---|
| 1658 | // write SOPHYA keywords
|
---|
[1221] | 1659 | if (ptr_dvl != NULL) addKeywordsOfDVList(*ptr_dvl);
|
---|
[839] | 1660 | }
|
---|
| 1661 |
|
---|
[1353] | 1662 |
|
---|
| 1663 |
|
---|
[1218] | 1664 | /*! \fn void SOPHYA::FitsOutFile::PutColToFits(int nocol, int nentries, double* donnees) const
|
---|
| 1665 |
|
---|
| 1666 | write double data from array 'donnees ' on column number 'nocol' of a BINTABLE extension.
|
---|
| 1667 | \param <nentries> number of data to be written
|
---|
| 1668 | */
|
---|
[1353] | 1669 |
|
---|
[1379] | 1670 | void FitsOutFile::PutColToFits(int nocol, int nentries, r_8* donnees) const
|
---|
[839] | 1671 | {
|
---|
| 1672 | int status = 0;
|
---|
[971] | 1673 | int hdutype;
|
---|
[839] | 1674 | fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
|
---|
[1209] | 1675 | if( status ) printerror(status,"PutColToFits: le movabs a foire");
|
---|
[839] | 1676 | fits_get_hdu_type(fptr_, &hdutype, &status);
|
---|
[867] | 1677 | if(hdutype != ASCII_TBL && hdutype != BINARY_TBL)
|
---|
| 1678 | {
|
---|
| 1679 | cout << " hdunum= " << hdunum_ << " hdutype= " << hdutype << endl;
|
---|
[1209] | 1680 | throw IOExc("FitsFile::PutColToFits, this HDU is not an ASCII table nor a binary table");
|
---|
[867] | 1681 | }
|
---|
[839] | 1682 | int code;
|
---|
| 1683 | long repeat, width;
|
---|
| 1684 | fits_get_coltype(fptr_, nocol+1, &code, &repeat,&width, &status);
|
---|
| 1685 | if( code != TDOUBLE)
|
---|
| 1686 | {
|
---|
[1209] | 1687 | cout << " WARNING : types don't match (PutColToFits) : on fits file= " << code << " to be written= DOUBLE " << endl;
|
---|
[839] | 1688 | }
|
---|
[1499] | 1689 | // cout << " 10 elements de colonne " << endl;
|
---|
| 1690 | // for (int toto=0; toto < 10; toto++) cout << donnees[toto] << endl;
|
---|
[839] | 1691 | fits_write_col(fptr_,TDOUBLE,nocol+1,1,1,nentries, donnees ,&status);
|
---|
[1752] | 1692 | if( status ) printerror( status,"erreur ecriture col. double, dans fichier fits" );
|
---|
[839] | 1693 | }
|
---|
[1218] | 1694 |
|
---|
| 1695 |
|
---|
| 1696 |
|
---|
| 1697 | /*! \fn void SOPHYA::FitsOutFile::PutColToFits(int nocol, int nentries, float* donnees) const
|
---|
| 1698 |
|
---|
| 1699 | same as previous method with float data
|
---|
| 1700 | */
|
---|
[1379] | 1701 | void FitsOutFile::PutColToFits(int nocol, int nentries, r_4* donnees) const
|
---|
[839] | 1702 | {
|
---|
| 1703 | int status = 0;
|
---|
| 1704 | int hdutype;
|
---|
| 1705 | fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
|
---|
[1209] | 1706 | if( status ) printerror(status,"PutColToFits: le movabs a foire");
|
---|
[839] | 1707 | fits_get_hdu_type(fptr_, &hdutype, &status);
|
---|
| 1708 | if(hdutype != ASCII_TBL && hdutype != BINARY_TBL)
|
---|
| 1709 | {
|
---|
| 1710 | cout << " hdunum= " << hdunum_ << " hdutype= " << hdutype << endl;
|
---|
[1209] | 1711 | throw IOExc("FitsFile::PutColToFits, this HDU is not an ASCII table nor a binary table");
|
---|
[839] | 1712 | }
|
---|
| 1713 | if(hdutype == ASCII_TBL && nocol>0)
|
---|
| 1714 | {
|
---|
[1209] | 1715 | throw IOExc("FitsFile::PutColToFits, this HDU is an ASCII table, nocol>0 forbidden");
|
---|
[839] | 1716 | }
|
---|
| 1717 | int code;
|
---|
| 1718 | long repeat, width;
|
---|
| 1719 | fits_get_coltype(fptr_, nocol+1, &code, &repeat,&width, &status);
|
---|
| 1720 | if( code != TFLOAT)
|
---|
| 1721 | {
|
---|
[1209] | 1722 | cout << " WARNING : types don't match (PutColToFits) : on fits file= " << code << " (FITS code), to be written= FLOAT " << endl;
|
---|
[839] | 1723 | }
|
---|
| 1724 | fits_write_col(fptr_,TFLOAT,nocol+1,1,1,nentries, donnees ,&status);
|
---|
[1752] | 1725 | if( status ) printerror( status,"erreur ecriture col. floats, dans fichier fits" );
|
---|
[839] | 1726 | }
|
---|
[1218] | 1727 |
|
---|
| 1728 |
|
---|
| 1729 | /*! \fn void FitsOutFile::PutColToFits(int nocol, int nentries, int* donnees) const
|
---|
| 1730 |
|
---|
| 1731 | same as previous method with int data
|
---|
| 1732 | */
|
---|
[1379] | 1733 | void FitsOutFile::PutColToFits(int nocol, int nentries, int_4* donnees) const
|
---|
[839] | 1734 | {
|
---|
| 1735 | int status = 0;
|
---|
| 1736 | int hdutype;
|
---|
| 1737 | fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
|
---|
[1209] | 1738 | if( status ) printerror(status,"PutColToFits: le movabs a foire");
|
---|
[839] | 1739 | fits_get_hdu_type(fptr_, &hdutype, &status);
|
---|
| 1740 | if(hdutype != ASCII_TBL && hdutype != BINARY_TBL)
|
---|
| 1741 | {
|
---|
| 1742 | cout << " hdunum= " << hdunum_ << " hdutype= " << hdutype << endl;
|
---|
[1209] | 1743 | throw IOExc("FitsFile::PutColToFits, this HDU is not an ASCII table nor a binary table");
|
---|
[839] | 1744 | }
|
---|
| 1745 | if(hdutype == ASCII_TBL && nocol>0)
|
---|
| 1746 | {
|
---|
[1209] | 1747 | throw IOExc("FitsFile::PutColToFits, this HDU is an ASCII table, nocol>0 forbidden");
|
---|
[839] | 1748 | }
|
---|
| 1749 | int code;
|
---|
| 1750 | long repeat, width;
|
---|
| 1751 | fits_get_coltype(fptr_, nocol+1, &code, &repeat,&width, &status);
|
---|
[1752] | 1752 |
|
---|
| 1753 |
|
---|
| 1754 | // la logique voudrait qu'on distingue TLONG et TINT. Mais si j'ecris
|
---|
| 1755 | // et relis immediatement quelque chose en TLONG l'experience montre
|
---|
| 1756 | // que ca foire. Donc, je fais tout en TINT, d'ailleurs cfitsio n'a pas
|
---|
| 1757 | // (apparemment) d'entiers de longueur superieure a 32 bits.
|
---|
| 1758 | // En fait, je n'y comprend rien. A suivre (GLM).
|
---|
| 1759 | if (code == TINT || code == TLONG )
|
---|
[839] | 1760 | {
|
---|
[1752] | 1761 | cout << " j'ecris des TINT" << endl;
|
---|
| 1762 | fits_write_col(fptr_,TINT,nocol+1,1,1,nentries, donnees ,&status);
|
---|
| 1763 | }
|
---|
| 1764 | else if (code == TSHORT)
|
---|
| 1765 | {
|
---|
| 1766 | cout << " j'ecris des TSHORT " << endl;
|
---|
| 1767 | fits_write_col(fptr_,TSHORT,nocol+1,1,1,nentries, donnees ,&status);
|
---|
| 1768 | }
|
---|
| 1769 | else
|
---|
| 1770 | {
|
---|
| 1771 | cout << " WARNING : types don't match (PutColToFits) : on fits file= " << code << " (FITS code), to be written= integers " << endl;
|
---|
[839] | 1772 | }
|
---|
[1752] | 1773 | if( status ) printerror( status,"erreur ecriture col. entiers, dans fichier fits" );
|
---|
[839] | 1774 | }
|
---|
[1218] | 1775 |
|
---|
| 1776 |
|
---|
| 1777 | /*! \fn void SOPHYA::FitsOutFile::PutColToFits(int nocol, int nentries, char** donnees) const
|
---|
| 1778 | same as previous method with char* data
|
---|
| 1779 | */
|
---|
[1209] | 1780 | void FitsOutFile::PutColToFits(int nocol, int nentries, char** donnees) const
|
---|
[839] | 1781 | {
|
---|
| 1782 | int status = 0;
|
---|
| 1783 | int hdutype;
|
---|
| 1784 | fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
|
---|
[1209] | 1785 | if( status ) printerror(status,"PutColToFits: le movabs a foire");
|
---|
[839] | 1786 | fits_get_hdu_type(fptr_, &hdutype, &status);
|
---|
| 1787 | if(hdutype != ASCII_TBL && hdutype != BINARY_TBL)
|
---|
| 1788 | {
|
---|
| 1789 | cout << " hdunum= " << hdunum_ << " hdutype= " << hdutype << endl;
|
---|
[1209] | 1790 | throw IOExc("FitsFile::PutColToFits, this HDU is not an ASCII table nor a binary table");
|
---|
[839] | 1791 | }
|
---|
| 1792 | if(hdutype == ASCII_TBL && nocol>0)
|
---|
| 1793 | {
|
---|
[1209] | 1794 | throw IOExc("FitsFile::PutColToFits, this HDU is an ASCII table, nocol>0 forbidden");
|
---|
[839] | 1795 | }
|
---|
| 1796 | int code;
|
---|
| 1797 | long repeat, width;
|
---|
| 1798 | fits_get_coltype(fptr_, nocol+1, &code, &repeat,&width, &status);
|
---|
| 1799 | if( code != TSTRING)
|
---|
| 1800 | {
|
---|
[1209] | 1801 | cout << " WARNING : types don't match (PutColToFits) : on fits file= " << code << " (FITS code), to be written= char** " << endl;
|
---|
[839] | 1802 | }
|
---|
| 1803 | fits_write_col(fptr_,TSTRING,nocol+1,1,1,nentries, donnees ,&status);
|
---|
[1752] | 1804 | if( status ) printerror( status,"erreur ecriture col. chars, dans fichier fits" );
|
---|
[839] | 1805 | }
|
---|
| 1806 |
|
---|
[1209] | 1807 | void FitsOutFile::PutBinTabLine(long NoLine, BnTblLine& ligne) const
|
---|
[1193] | 1808 | {
|
---|
[1209] | 1809 | // on ne fait pas de verification de type, ni de dimension ici, pour
|
---|
| 1810 | // des raisons de performances
|
---|
| 1811 | int k;
|
---|
[1193] | 1812 | int status= 0;
|
---|
| 1813 | int anull;
|
---|
[1209] | 1814 | int ncol=0;
|
---|
[1193] | 1815 | long nels=1;
|
---|
[1209] | 1816 | // int nbcols;
|
---|
| 1817 | // fits_get_num_cols(fptr_, &nbcols,&status);
|
---|
| 1818 | for (k=0; k<ligne.ddata_.size(); k++, ncol++)
|
---|
[1193] | 1819 | {
|
---|
[1209] | 1820 | fits_write_col(fptr_,TDOUBLE,ncol+1,NoLine+1,1,1, &ligne.ddata_[k] ,&status);
|
---|
| 1821 | if( status ) printerror( status, "PutBinTabLine : erreur ecriture double" );
|
---|
[1193] | 1822 | }
|
---|
[1209] | 1823 | for (k=0; k<ligne.fdata_.size(); k++, ncol++)
|
---|
| 1824 | {
|
---|
| 1825 | fits_write_col(fptr_,TFLOAT,ncol+1,NoLine+1,1,1, &ligne.fdata_[k] ,&status);
|
---|
| 1826 | if( status ) printerror( status, "PutBinTabLine : erreur ecriture float" );
|
---|
| 1827 | }
|
---|
| 1828 | for (k=0; k<ligne.idata_.size(); k++, ncol++)
|
---|
| 1829 | {
|
---|
| 1830 | fits_write_col(fptr_,TINT,ncol+1,NoLine+1,1,1, &ligne.idata_[k] ,&status);
|
---|
| 1831 | if( status ) printerror( status, "PutBinTabLine : erreur ecriture entier" );
|
---|
| 1832 | }
|
---|
[1359] | 1833 | for (k=0; k<ligne.ldata_.size(); k++, ncol++)
|
---|
| 1834 | {
|
---|
| 1835 | fits_write_col(fptr_,TLONG,ncol+1,NoLine+1,1,1, &ligne.ldata_[k] ,&status);
|
---|
| 1836 | if( status ) printerror( status, "PutBinTabLine : erreur ecriture entier long" );
|
---|
| 1837 | }
|
---|
| 1838 | for (k=0; k<ligne.bdata_.size(); k++, ncol++)
|
---|
| 1839 | {
|
---|
| 1840 | fits_write_col(fptr_,TBYTE,ncol+1,NoLine+1,1,1, &ligne.bdata_[k] ,&status);
|
---|
| 1841 | if( status ) printerror( status, "PutBinTabLine : erreur ecriture byte" );
|
---|
| 1842 | }
|
---|
[1209] | 1843 |
|
---|
| 1844 | for (k=0; k<ligne.cdata_.size(); k++, ncol++)
|
---|
| 1845 | {
|
---|
[1220] | 1846 | fits_write_col(fptr_,TSTRING,ncol+1,NoLine+1,1,1, (void*)ligne.cdata_[k].c_str() ,&status);
|
---|
[1209] | 1847 | if( status ) printerror( status, "PutBinTabLine : erreur ecriture caracteres" );
|
---|
| 1848 | }
|
---|
[1193] | 1849 | }
|
---|
| 1850 |
|
---|
| 1851 |
|
---|
[1218] | 1852 | /* \fn void SOPHYA::FitsOutFile::DVListIntoPrimaryHeader(DVList& dvl) const
|
---|
| 1853 |
|
---|
| 1854 | Put keywords from a DVList into the primary header of the fits-file
|
---|
| 1855 | */
|
---|
[1246] | 1856 | void FitsOutFile::DVListIntoPrimaryHeader(DVList& dvl)
|
---|
[1143] | 1857 | {
|
---|
| 1858 | int status = 0;
|
---|
| 1859 | int hdutype;
|
---|
[1246] | 1860 | if (hdunum_ == 0)
|
---|
| 1861 | {
|
---|
| 1862 | if (dvlToPrimary_ == NULL) dvlToPrimary_ = new DVList(dvl);
|
---|
| 1863 | else dvlToPrimary_->Merge(dvl);
|
---|
| 1864 | }
|
---|
| 1865 | else
|
---|
| 1866 | {
|
---|
| 1867 | fits_movabs_hdu(fptr_,1,&hdutype,&status);
|
---|
| 1868 | addKeywordsOfDVList(dvl);
|
---|
| 1869 | fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
|
---|
| 1870 | }
|
---|
[1143] | 1871 | }
|
---|
[839] | 1872 |
|
---|
[1143] | 1873 |
|
---|
[1246] | 1874 | void FitsOutFile::writeSignatureOnFits(int hdunum) const
|
---|
[839] | 1875 | {
|
---|
| 1876 | int status = 0;
|
---|
[1246] | 1877 | int hdutype;
|
---|
[839] | 1878 | char keyname[LEN_KEYWORD];
|
---|
| 1879 | char strval[FLEN_VALUE];
|
---|
| 1880 | char comment[FLEN_COMMENT];
|
---|
[1246] | 1881 | if (hdunum_ == 0)
|
---|
| 1882 | {
|
---|
| 1883 | cerr << " WARNING : can't write keywords on non existing primary header" << endl;
|
---|
| 1884 | return;
|
---|
| 1885 | }
|
---|
| 1886 | fits_movabs_hdu(fptr_,1,&hdutype,&status);
|
---|
| 1887 | //
|
---|
[971] | 1888 | strncpy(keyname, "CREATOR", LEN_KEYWORD);
|
---|
[1418] | 1889 | keyname[7] = '\0';
|
---|
[971] | 1890 | strcpy(strval, "SOPHYA");
|
---|
| 1891 | strcpy(comment," SOPHYA Package - FITSIOServer ");
|
---|
| 1892 | fits_write_key(fptr_, TSTRING, keyname, &strval, comment, &status);
|
---|
| 1893 | if( status ) printerror( status );
|
---|
[1143] | 1894 | fits_write_date(fptr_, &status);
|
---|
[971] | 1895 | fits_write_comment(fptr_,"..............................................", &status);
|
---|
| 1896 | fits_write_comment(fptr_, " SOPHYA package - FITSIOSever ", &status);
|
---|
| 1897 | fits_write_comment(fptr_, " (C) LAL/IN2P3-CNRS Orsay, FRANCE 2000", &status);
|
---|
| 1898 | fits_write_comment(fptr_, " (C) DAPNIA/CEA Saclay, FRANCE 2000", &status);
|
---|
| 1899 | fits_write_comment(fptr_,"..............................................", &status);
|
---|
[1045] | 1900 | if( status ) printerror( status, "erreur writeSignatureOnFits" );
|
---|
[1246] | 1901 | //
|
---|
| 1902 | fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
|
---|
[839] | 1903 | }
|
---|
| 1904 |
|
---|
[903] | 1905 |
|
---|
[1246] | 1906 | void FitsOutFile::addKeywordsOfDVList( DVList& dvl) const
|
---|
[1143] | 1907 | {
|
---|
| 1908 | int status = 0;
|
---|
| 1909 | fits_write_comment(fptr_,"---------- keywords from SOPHYA ---------", &status);
|
---|
| 1910 | DVList::ValList::const_iterator it;
|
---|
| 1911 | for(it = dvl.Begin(); it != dvl.End(); it++)
|
---|
| 1912 | {
|
---|
[1311] | 1913 | MuTyV::MTVType keytype= (*it).second.elval.Type();
|
---|
[1418] | 1914 | char keyname[LEN_KEYWORD];
|
---|
| 1915 | strncpy(keyname,(*it).first.substr(0,64).c_str(),LEN_KEYWORD);
|
---|
| 1916 | int bout = ((*it).first.substr(0,64).length() < LEN_KEYWORD) ? (*it).first.substr(0,64).length() : LEN_KEYWORD-1;
|
---|
| 1917 | keyname[bout] = '\0';
|
---|
| 1918 | string key((*it).first.substr(0,64));
|
---|
| 1919 | // string key(keyname);
|
---|
[1143] | 1920 | char comment[FLEN_COMMENT];
|
---|
| 1921 | char strval[FLEN_VALUE]= "";
|
---|
| 1922 | char *comkey = "COMMENT";
|
---|
[1353] | 1923 | // fits_read_keyword(fptr_, keyname, strval, NULL, &status);
|
---|
| 1924 | // if (status != 0 || strncmp(keyname,comkey,LEN_KEYWORD-1) == 0 )
|
---|
[1143] | 1925 | {
|
---|
[1183] | 1926 | string coco = dvl.GetComment(key);
|
---|
| 1927 | coco.copy( comment, FLEN_COMMENT-1);
|
---|
| 1928 | int bout = (coco.length() < FLEN_COMMENT) ? coco.length() : FLEN_COMMENT-1;
|
---|
| 1929 | comment[bout]= '\0';
|
---|
[1143] | 1930 | status = 0;
|
---|
| 1931 | switch (keytype)
|
---|
| 1932 | {
|
---|
[1311] | 1933 | case MuTyV::MTVInteger :
|
---|
[1143] | 1934 | {
|
---|
[1183] | 1935 | int ival = (int)dvl.GetI(key);
|
---|
| 1936 | fits_write_key(fptr_,TINT,keyname,&ival, comment,&status);
|
---|
[1143] | 1937 | break;
|
---|
| 1938 | }
|
---|
[1311] | 1939 | case MuTyV::MTVFloat :
|
---|
[1143] | 1940 | {
|
---|
[1183] | 1941 | double dval= (double)dvl.GetD(key);
|
---|
[1143] | 1942 | fits_write_key(fptr_,TDOUBLE,keyname,&dval,comment,&status);
|
---|
| 1943 | break;
|
---|
| 1944 | }
|
---|
[1311] | 1945 | case MuTyV::MTVString :
|
---|
[1143] | 1946 | {
|
---|
[1183] | 1947 | char strvaleur[FLEN_VALUE]= "";
|
---|
| 1948 | string valChaine = dvl.GetS(key);
|
---|
| 1949 | valChaine.copy(strvaleur, FLEN_VALUE-1);
|
---|
| 1950 | int fin = (valChaine.length() < FLEN_VALUE) ? valChaine.length() : FLEN_VALUE-1;
|
---|
| 1951 | strvaleur[fin]= '\0';
|
---|
| 1952 |
|
---|
| 1953 | fits_write_key(fptr_,TSTRING,keyname,&strvaleur,comment,&status);
|
---|
[1143] | 1954 | break;
|
---|
| 1955 | }
|
---|
| 1956 | }
|
---|
| 1957 | }
|
---|
| 1958 | if( status ) printerror( status,"fitsfile: probleme ecriture mot-cle du dvlist" );
|
---|
| 1959 | }
|
---|
| 1960 | fits_write_comment(fptr_,"--------------------------------------", &status);
|
---|
| 1961 | }
|
---|
[903] | 1962 |
|
---|
| 1963 |
|
---|
[1246] | 1964 | void FitsOutFile::addDVListOnPrimary()
|
---|
| 1965 | {
|
---|
| 1966 | int status = 0;
|
---|
| 1967 | int hdutype;
|
---|
| 1968 | if (hdunum_ == 0)
|
---|
| 1969 | {
|
---|
| 1970 | cerr << " WARNING : can't write keywords on non existing primary header" << endl;
|
---|
| 1971 | return;
|
---|
| 1972 | }
|
---|
| 1973 | if (dvlToPrimary_ != NULL)
|
---|
| 1974 | {
|
---|
| 1975 | fits_movabs_hdu(fptr_,1,&hdutype,&status);
|
---|
| 1976 | addKeywordsOfDVList(*dvlToPrimary_);
|
---|
| 1977 | delete dvlToPrimary_;
|
---|
| 1978 | dvlToPrimary_ = NULL;
|
---|
| 1979 | fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
|
---|
| 1980 | }
|
---|
| 1981 | }
|
---|
[839] | 1982 |
|
---|
[1353] | 1983 |
|
---|
| 1984 | /*! \fn void FitsOutFile::appendInHeader(FitsInFile& infits, int hdunum)
|
---|
| 1985 |
|
---|
| 1986 | get a header from FitsInFile and append to the header beeing built
|
---|
| 1987 | (shifting mandatory keywords)
|
---|
| 1988 | */
|
---|
| 1989 |
|
---|
| 1990 | void FitsOutFile::appendInputHeader(FitsInFile& infits, int hdunum)
|
---|
| 1991 | {
|
---|
[1771] | 1992 |
|
---|
| 1993 | infits.GetKeywordsFromHeader(hdunum, mots_cles_);
|
---|
| 1994 | /*
|
---|
[1353] | 1995 | int status = 0;
|
---|
| 1996 | int hdutype;
|
---|
| 1997 | fitsfile* fptr=infits.fitsfilePtr();
|
---|
| 1998 | fits_movabs_hdu(fptr,hdunum,&hdutype,&status);
|
---|
| 1999 | if( status ) fits_report_error(stderr,status);
|
---|
| 2000 |
|
---|
| 2001 | // get number of keywords
|
---|
| 2002 | int nkeys,keypos;
|
---|
| 2003 | fits_get_hdrpos(fptr,&nkeys,&keypos,&status);
|
---|
| 2004 | if( status ) fits_report_error(stderr,status);
|
---|
| 2005 | // shift with the number of mandatory keywords
|
---|
| 2006 | int num= 0;
|
---|
| 2007 | // if primary header
|
---|
| 2008 | if (hdunum == 1)
|
---|
| 2009 | {
|
---|
| 2010 | // read NAXIS
|
---|
| 2011 | int naxis=0;
|
---|
| 2012 | fits_read_key(fptr,TINT,"NAXIS",&naxis,NULL,&status);
|
---|
| 2013 | // number of mandatory keywords
|
---|
| 2014 | num = naxis+3;
|
---|
| 2015 | }
|
---|
| 2016 | // extensions
|
---|
| 2017 | else
|
---|
| 2018 | {
|
---|
| 2019 | if (hdutype == IMAGE_HDU)
|
---|
| 2020 | {
|
---|
| 2021 | // read NAXIS
|
---|
| 2022 | int naxis=0;
|
---|
| 2023 | fits_read_key(fptr,TINT,"NAXIS",&naxis,NULL,&status);
|
---|
| 2024 | // number of mandatory keywords
|
---|
| 2025 | num = naxis+5;
|
---|
| 2026 | }
|
---|
| 2027 | else
|
---|
| 2028 | if(hdutype == ASCII_TBL || hdutype == BINARY_TBL)
|
---|
| 2029 | {
|
---|
| 2030 | // number of mandatory keywords
|
---|
| 2031 | num = 8;
|
---|
| 2032 | }
|
---|
| 2033 | }
|
---|
| 2034 | int j;
|
---|
| 2035 | char keyname[LEN_KEYWORD];
|
---|
| 2036 | char value[FLEN_VALUE];
|
---|
| 2037 | char comment[FLEN_COMMENT];
|
---|
| 2038 | for(j = num+1; j <= nkeys; j++)
|
---|
| 2039 | {
|
---|
| 2040 | char dtype;
|
---|
| 2041 | fits_read_keyn(fptr,j,keyname,value,comment,&status);
|
---|
| 2042 | if(status)
|
---|
| 2043 | {
|
---|
| 2044 | fits_report_error(stderr,status);
|
---|
| 2045 | status=0;
|
---|
| 2046 | }
|
---|
| 2047 | string kn(keyname);
|
---|
| 2048 | string cm(comment);
|
---|
| 2049 | string val(value);
|
---|
| 2050 | FitsKeyword kw(kn, val, cm);
|
---|
| 2051 | mots_cles_.push_back(kw);
|
---|
| 2052 | }
|
---|
[1771] | 2053 | */
|
---|
[1353] | 2054 | }
|
---|
| 2055 | void FitsOutFile::writeAppendedHeaderOnFits()
|
---|
| 2056 | {
|
---|
| 2057 | for (list<FitsKeyword>::iterator it=mots_cles_.begin(); it !=mots_cles_.end(); it++)
|
---|
| 2058 | {
|
---|
| 2059 | (*it).writeOnFits(fptr_);
|
---|
| 2060 | }
|
---|
| 2061 | mots_cles_.clear();
|
---|
| 2062 | }
|
---|
| 2063 |
|
---|
| 2064 | void FitsOutFile::insertKeywordOnHeader(string keyname, double value, string comment)
|
---|
| 2065 | {
|
---|
[1418] | 2066 | char cvalue[16];
|
---|
[1353] | 2067 | sprintf(cvalue,"%e",value);
|
---|
[1418] | 2068 | FitsKeyword kw(keyname, string(cvalue), comment, 'F');
|
---|
[1353] | 2069 | mots_cles_.push_back(kw);
|
---|
| 2070 | }
|
---|
[1418] | 2071 | void FitsOutFile::insertKeywordOnHeader(string keyname, int value, string comment)
|
---|
| 2072 | {
|
---|
| 2073 | char cvalue[16];
|
---|
| 2074 | sprintf(cvalue,"%d",value);
|
---|
| 2075 | FitsKeyword kw(keyname, string(cvalue), comment, 'I');
|
---|
| 2076 | mots_cles_.push_back(kw);
|
---|
| 2077 | }
|
---|
| 2078 | void FitsOutFile::insertKeywordOnHeader(string keyname, string value, string comment)
|
---|
| 2079 | {
|
---|
| 2080 | FitsKeyword kw(keyname, value , comment, 'C');
|
---|
| 2081 | mots_cles_.push_back(kw);
|
---|
| 2082 | }
|
---|
[1353] | 2083 |
|
---|
| 2084 | void FitsOutFile::insertCommentLineOnHeader(string comment)
|
---|
| 2085 | {
|
---|
| 2086 | FitsKeyword kw(comment);
|
---|
| 2087 | mots_cles_.push_back(kw);
|
---|
| 2088 | }
|
---|
| 2089 |
|
---|
| 2090 | void FitsOutFile::PrintHeaderToBeAppended()
|
---|
| 2091 | {
|
---|
| 2092 | cout << " contenu du header en cours de fabrication " << endl;
|
---|
| 2093 | for (list<FitsKeyword>::iterator it=mots_cles_.begin(); it !=mots_cles_.end(); it++)
|
---|
| 2094 | {
|
---|
| 2095 | (*it).Print();
|
---|
| 2096 | }
|
---|
| 2097 | }
|
---|
| 2098 |
|
---|
| 2099 |
|
---|
| 2100 | FitsKeyword::FitsKeyword()
|
---|
| 2101 | {
|
---|
| 2102 | datatype_=' ';
|
---|
| 2103 | keyname_ = string("");
|
---|
| 2104 | dvalue_=0.;
|
---|
| 2105 | ivalue_=1;
|
---|
| 2106 | svalue_=string("");
|
---|
| 2107 | comment_=string("");
|
---|
| 2108 | }
|
---|
| 2109 |
|
---|
| 2110 | FitsKeyword::FitsKeyword(string comment)
|
---|
| 2111 | {
|
---|
| 2112 | datatype_=' ';
|
---|
| 2113 | keyname_=string("COMMENT");
|
---|
| 2114 | comment_=comment;
|
---|
[1418] | 2115 | }
|
---|
[1353] | 2116 |
|
---|
| 2117 | FitsKeyword::FitsKeyword(string keyname, string value, string comment) : keyname_(keyname), comment_(comment)
|
---|
| 2118 | {
|
---|
| 2119 | int status=0;
|
---|
| 2120 | char dtype;
|
---|
| 2121 | const char* val= value.c_str();
|
---|
| 2122 | char* valk = const_cast<char*>(val);
|
---|
| 2123 | fits_get_keytype(valk,&dtype,&status);
|
---|
| 2124 | if(status)
|
---|
| 2125 | {
|
---|
| 2126 | status=0;
|
---|
[1354] | 2127 | if (status == VALUE_UNDEFINED) cout << "WARNING (FitsKeyword) : undefined keyword value " << endl;
|
---|
[1353] | 2128 | datatype_=' ';
|
---|
| 2129 | }
|
---|
| 2130 | else datatype_=dtype;
|
---|
| 2131 |
|
---|
| 2132 | switch( datatype_ )
|
---|
| 2133 | {
|
---|
| 2134 | case 'C':
|
---|
| 2135 | {
|
---|
[1354] | 2136 | strip(valk, 'B','\'');
|
---|
| 2137 | svalue_ = string(valk);
|
---|
[1353] | 2138 | break;
|
---|
| 2139 | }
|
---|
| 2140 | case 'I':
|
---|
| 2141 | {
|
---|
| 2142 | ivalue_ = atoi(val);
|
---|
| 2143 | break;
|
---|
| 2144 | }
|
---|
| 2145 | case 'L':
|
---|
| 2146 | {
|
---|
[1354] | 2147 | bool bb = value.c_str();
|
---|
| 2148 | ivalue_ = (int)bb;
|
---|
[1353] | 2149 | break;
|
---|
| 2150 | }
|
---|
| 2151 | case 'F':
|
---|
| 2152 | {
|
---|
| 2153 | dvalue_ = atof(val);
|
---|
| 2154 | break;
|
---|
| 2155 | }
|
---|
| 2156 | case 'X':
|
---|
| 2157 | {
|
---|
| 2158 | throw IOExc("FitsKeyword , complex keyword value not supported");
|
---|
| 2159 | }
|
---|
| 2160 | }
|
---|
| 2161 | }
|
---|
| 2162 |
|
---|
[1418] | 2163 | // constructeur pour les mots-cles maison (ne prvenant pas de la lecture d'un fichier fits)
|
---|
| 2164 | FitsKeyword::FitsKeyword(string keyname, string value, string comment, char type) : keyname_(keyname), comment_(comment), datatype_(type)
|
---|
| 2165 | {
|
---|
| 2166 | char dtype;
|
---|
| 2167 | const char* val= value.c_str();
|
---|
| 2168 | char* valk = const_cast<char*>(val);
|
---|
| 2169 | switch( datatype_ )
|
---|
| 2170 | {
|
---|
| 2171 | case 'C':
|
---|
| 2172 | {
|
---|
| 2173 | strip(valk, 'B','\'');
|
---|
| 2174 | svalue_ = string(valk);
|
---|
| 2175 | break;
|
---|
| 2176 | }
|
---|
| 2177 | case 'I':
|
---|
| 2178 | {
|
---|
| 2179 | ivalue_ = atoi(val);
|
---|
| 2180 | break;
|
---|
| 2181 | }
|
---|
| 2182 | case 'L':
|
---|
| 2183 | {
|
---|
| 2184 | bool bb = value.c_str();
|
---|
| 2185 | ivalue_ = (int)bb;
|
---|
| 2186 | break;
|
---|
| 2187 | }
|
---|
| 2188 | case 'F':
|
---|
| 2189 | {
|
---|
| 2190 | dvalue_ = atof(val);
|
---|
| 2191 | break;
|
---|
| 2192 | }
|
---|
| 2193 | case 'X':
|
---|
| 2194 | {
|
---|
| 2195 | throw IOExc("FitsKeyword , complex keyword value not supported");
|
---|
| 2196 | }
|
---|
| 2197 | }
|
---|
| 2198 | }
|
---|
| 2199 |
|
---|
[1353] | 2200 | void FitsKeyword::writeOnFits(fitsfile* ptr)
|
---|
| 2201 | {
|
---|
| 2202 | int status=0;
|
---|
[1418] | 2203 | char keyname[LEN_KEYWORD];
|
---|
| 2204 | char comment[FLEN_COMMENT];
|
---|
| 2205 | keyname_.copy(keyname, LEN_KEYWORD);
|
---|
| 2206 | int bout = (keyname_.length() < LEN_KEYWORD) ? keyname_.length() : LEN_KEYWORD-1;
|
---|
| 2207 | keyname[bout] = '\0';
|
---|
| 2208 | comment_.copy( comment, FLEN_COMMENT);
|
---|
| 2209 | bout = (comment_.length() < FLEN_COMMENT) ? comment_.length() : FLEN_COMMENT-1;
|
---|
| 2210 | comment[bout]= '\0';
|
---|
| 2211 |
|
---|
[1353] | 2212 | int nkeys,keypos;
|
---|
| 2213 | fits_get_hdrpos(ptr,&nkeys,&keypos,&status);
|
---|
| 2214 | switch( datatype_ )
|
---|
| 2215 | {
|
---|
| 2216 | case 'C':
|
---|
| 2217 | {
|
---|
[1418] | 2218 | char value[FLEN_VALUE]="";
|
---|
| 2219 | svalue_.copy(value, FLEN_VALUE-1);
|
---|
| 2220 | int fin = (svalue_.length() < FLEN_VALUE) ? svalue_.length() : FLEN_VALUE-1;
|
---|
| 2221 | value[fin]= '\0';
|
---|
[1353] | 2222 | fits_write_key(ptr,TSTRING,keyname,&value, comment,&status);
|
---|
| 2223 | fits_report_error(stderr,status);
|
---|
| 2224 | break;
|
---|
| 2225 | }
|
---|
| 2226 | case 'I':
|
---|
| 2227 | {
|
---|
| 2228 | fits_write_key(ptr,TINT,keyname,&ivalue_, comment,&status);
|
---|
| 2229 | fits_report_error(stderr,status);
|
---|
| 2230 | break;
|
---|
| 2231 | }
|
---|
| 2232 | case 'L':
|
---|
| 2233 | {
|
---|
| 2234 | fits_write_key(ptr,TLOGICAL,keyname,&ivalue_, comment,&status);
|
---|
| 2235 | fits_report_error(stderr,status);
|
---|
| 2236 | break;
|
---|
| 2237 | }
|
---|
| 2238 | case 'F':
|
---|
| 2239 | {
|
---|
| 2240 | fits_write_key(ptr,TDOUBLE,keyname,&dvalue_, comment,&status);
|
---|
| 2241 | fits_report_error(stderr,status);
|
---|
| 2242 | break;
|
---|
| 2243 | }
|
---|
| 2244 | case 'X':
|
---|
| 2245 | {
|
---|
| 2246 | cout << "FitsKeyword : complex keyword value not supported" << endl;;
|
---|
| 2247 | }
|
---|
| 2248 | default :
|
---|
| 2249 | {
|
---|
| 2250 | char *comkey = "COMMENT";
|
---|
| 2251 | if(strncmp(keyname,comkey,LEN_KEYWORD-1) == 0)
|
---|
| 2252 | {
|
---|
| 2253 | fits_write_comment(ptr,comment,&status);
|
---|
| 2254 | fits_report_error(stderr,status);
|
---|
| 2255 | }
|
---|
| 2256 | else
|
---|
| 2257 | {
|
---|
| 2258 | cout << " WARNING (FitsKeyword::writeOnFits) : unrecognized keyword : " << keyname_ << endl;
|
---|
| 2259 | }
|
---|
| 2260 | }
|
---|
| 2261 | }
|
---|
| 2262 | }
|
---|
| 2263 |
|
---|
| 2264 | void FitsKeyword::Print()
|
---|
| 2265 | {
|
---|
| 2266 | switch( datatype_ )
|
---|
| 2267 | {
|
---|
| 2268 | case 'C':
|
---|
| 2269 | {
|
---|
| 2270 | cout << " mot cle : " << keyname_ << " valeur : " << svalue_ << " commentaire : " << comment_ <<endl;
|
---|
| 2271 | break;
|
---|
| 2272 | }
|
---|
| 2273 | case 'I':
|
---|
| 2274 | {
|
---|
| 2275 | cout << " mot cle : " << keyname_ << " valeur : " << ivalue_ << " commentaire : " << comment_ <<endl;
|
---|
| 2276 | break;
|
---|
| 2277 | }
|
---|
| 2278 | case 'L':
|
---|
| 2279 | {
|
---|
| 2280 | cout << " mot cle : " << keyname_ << " valeur : " << ivalue_ << " commentaire : " << comment_ <<endl;
|
---|
| 2281 | break;
|
---|
| 2282 | }
|
---|
| 2283 | case 'F':
|
---|
| 2284 | {
|
---|
| 2285 | cout << " mot cle : " << keyname_ << " valeur : " << dvalue_ << " commentaire : " << comment_ <<endl;
|
---|
| 2286 | break;
|
---|
| 2287 | }
|
---|
| 2288 | case 'X':
|
---|
| 2289 | {
|
---|
| 2290 | cout << "FitsKeyword : complex keyword value not supported" << endl;;
|
---|
| 2291 | }
|
---|
| 2292 | default :
|
---|
| 2293 | {
|
---|
| 2294 | cout << " mot cle : " << keyname_ << " commentaire : " << comment_ <<endl;
|
---|
| 2295 | }
|
---|
| 2296 | }
|
---|
| 2297 | }
|
---|