[949] | 1 | #include "machdefs.h"
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| 2 | #include <stdlib.h>
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[839] | 3 | #include "fitsfile.h"
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| 4 | #include "pexceptions.h"
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| 5 | #include "strutil.h"
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[903] | 6 | #include "anydataobj.h"
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| 7 | #include "fitsspherehealpix.h"
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[1136] | 8 |
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[1371] | 9 | /*!
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| 10 | \defgroup FitsIOServer FitsIOServer module
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| 11 | This module contains classes which handle FITS format I/O for
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| 12 | SOPHYA objects. This module uses cfitsio library.
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| 13 | */
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[1136] | 14 |
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[1359] | 15 | void BnTblLine::setFormat(int dc, int fc, int ic, int lc, int bc,int cc, vector<string> names)
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[1218] | 16 | {
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[1359] | 17 | int nbcols = dc + fc + ic + cc + lc + bc;
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[1218] | 18 | int maxName = names.size();
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| 19 | if (nbcols != maxName)
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| 20 | {
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| 21 | cout << " WARNING: BnTblLine:: length of vector of column names not equal to total number of columns" << endl;
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| 22 | maxName = nbcols < maxName ? nbcols : maxName;
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| 23 | }
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| 24 | ColName_ = vector<string>(nbcols);
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| 25 | for (int k=0; k < maxName; k++) ColName_[k] = names[k];
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| 26 | if (dc >0) ddata_ = vector<double>(dc);
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| 27 | if (fc >0) fdata_ = vector<float>(fc);
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| 28 | if (ic >0) idata_ = vector<int>(fc);
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| 29 | if (cc >0) cdata_ = vector<string>(fc);
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[1359] | 30 | if (lc >0) ldata_ = vector<long>(lc);
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| 31 | if (bc >0) bdata_ = vector<unsigned char>(bc);
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[1218] | 32 | }
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| 33 |
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| 34 | bool BnTblLine::sameFormat(const BnTblLine& btl) const
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| 35 | {
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[1359] | 36 | if (btl.ddata_.size() == ddata_.size() && btl.fdata_.size() == fdata_.size() && btl.idata_.size() == idata_.size() && btl.cdata_.size() == cdata_.size() && btl.ldata_.size() == ldata_.size() && btl.bdata_.size() == bdata_.size()) return true;
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[1218] | 37 | else return false;
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| 38 | }
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| 39 |
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| 40 | void BnTblLine::Print()
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| 41 | {
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| 42 | int k;
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| 43 | cout << " ********* ligne ************* " << endl;
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| 44 | cout << " *** noms de variables " << endl;
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| 45 | for (k=0; k < ColName_.size(); k++) cout << ColName_[k] << " ";
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| 46 | cout << endl;
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| 47 | cout << " *** variables doubles " << endl;
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| 48 | for (k=0; k < ddata_.size(); k++) cout << ddata_[k] << " ";
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| 49 | cout << endl;
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| 50 | cout << " *** variables float " << endl;
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| 51 | for (k=0; k < fdata_.size(); k++) cout << fdata_[k] << " ";
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| 52 | cout << endl;
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| 53 | cout << " *** variables int " << endl;
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| 54 | for (k=0; k < idata_.size(); k++) cout << idata_[k] << " ";
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| 55 | cout << endl;
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| 56 | cout << " *** variables string " << endl;
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| 57 | for (k=0; k < cdata_.size(); k++) cout << cdata_[k] << " ";
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| 58 | cout << endl;
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[1359] | 59 | cout << " *** variables long " << endl;
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| 60 | for (k=0; k < ldata_.size(); k++) cout << ldata_[k] << " ";
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| 61 | cout << endl;
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| 62 | cout << " *** variables byte " << endl;
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| 63 | for (k=0; k < bdata_.size(); k++) cout << (int)bdata_[k] << " ";
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| 64 | cout << endl;
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[1218] | 65 | cout << " ***************************** " << endl;
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| 66 | }
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| 67 |
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| 68 |
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| 69 |
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| 70 | /*!
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| 71 | \class SOPHYA::FitsIOHandler
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[1371] | 72 | \ingroup FitsIOServer
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[1218] | 73 | The class structure is analogous to Sophya-PPersist system :
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| 74 | Each SOPHYA object XXX is associated with a object of class FITS_XXX
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| 75 | (inheriting from FitsFileHandler), to which input/output operations with FITS
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| 76 | files are delegated (through a class Hierarchy : FitsFile (virtual),
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| 77 | FitsInFile, FitsOutFile) . A typical example of use is the following :
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| 78 |
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| 79 | \verbatim
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| 80 | int m=... ;
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| 81 | SphereHEALPix<r_8> sphere1(m); // definition of the SOPHYA object
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| 82 | .... fill the sphere ....
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| 83 |
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| 84 | FITS_SphereHEALPix<r_8> fits_sph1(sphere1);
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| 85 | // delegated object
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| 86 | fits_sph.Write("myfile.fits"); // writing on FITS file
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| 87 |
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| 88 | FITS_SphereHEALPix<r_8> fits_sph2("myfile.fits");
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| 89 | // load a delegated object
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| 90 | // from FITS file
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| 91 | SphereHEALPix<r_8> sphere2=(SphereHEALPix<r_8>)fits_sph2;
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| 92 | // casting the delegated object
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| 93 | // into a SOPHYA object
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| 94 | \endverbatim
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| 95 |
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| 96 |
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| 97 | */
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| 98 |
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| 99 | /*! \fn void SOPHYA::FitsIOHandler::Read(char flnm[],int hdunum)
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| 100 |
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| 101 | this method is called from inherited objects :
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| 102 |
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| 103 | opens a file 'flnm'
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| 104 |
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| 105 | gets parameters in extension-header (hdunum)
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| 106 |
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| 107 | calls the method 'ReadFromFits' from the inherited object
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| 108 | */
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[1136] | 109 | void FitsIOHandler::Read(char flnm[],int hdunum)
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[839] | 110 | {
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[1136] | 111 | FitsInFile ifts(flnm);
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| 112 | Read(ifts, hdunum);
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[839] | 113 | }
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[1218] | 114 |
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| 115 | /*! \fn void SOPHYA::FitsIOHandler::Read(FitsInFile& is, int hdunum)
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| 116 | Read the data on extension hdunum (or primary header, if hdunum=1) from FitsInFIle. If hdunum is not addressed, , one reads the next extension, with respect to the current position.
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| 117 | */
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[1136] | 118 | void FitsIOHandler::Read(FitsInFile& is, int hdunum)
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| 119 | {
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[1300] | 120 | is.ReadHeader(hdunum);
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[1136] | 121 | ReadFromFits(is);
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| 122 | }
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| 123 |
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| 124 |
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[1218] | 125 | /*! \fn void SOPHYA::FitsIOHandler::Write(char flnm[])
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| 126 | this method is called from inherited objects.
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| 127 |
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| 128 | for writing a new object in a new fits-extension :
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| 129 |
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[1234] | 130 | \warning By convention, primary header may contain fits-image data.
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| 131 | For switching off this convention (i.e. to make sure that all data will be on fits-extensions) use the method :
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[1218] | 132 |
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| 133 | firstImageOnPrimaryHeader() (see below)
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| 134 |
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| 135 | calls the method 'WriteToFits' from the inherited object
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| 136 |
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| 137 | */
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[1193] | 138 | void FitsIOHandler::Write(char flnm[])
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[1136] | 139 |
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| 140 | {
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[1231] | 141 | FitsOutFile of(flnm, FitsFile::unknown);
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[1136] | 142 | Write(of);
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| 143 | }
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| 144 |
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| 145 | void FitsIOHandler::Write(FitsOutFile& os)
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| 146 | {
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| 147 | WriteToFits(os);
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| 148 | }
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| 149 |
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| 150 |
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| 151 |
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[839] | 152 |
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| 153 | FitsFile::~FitsFile()
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| 154 | {
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| 155 | int status = 0;
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[1175] | 156 | if( fptr_ != NULL)
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[903] | 157 | {
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| 158 | fits_close_file(fptr_,&status);
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[1175] | 159 | // je ne fais pas delete fptr_, c'est la lib. fitsio qui a fait
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| 160 | // new...
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[903] | 161 | }
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[1175] | 162 | if( status ) printerror( status );
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[839] | 163 | }
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[903] | 164 |
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[1136] | 165 |
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| 166 | void FitsFile::printerror(int &status)
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| 167 | //*****************************************************/
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| 168 | //* Print out cfitsio error messages and exit program */
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| 169 | //*****************************************************/
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[1045] | 170 | {
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[1136] | 171 | if( status )
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| 172 | {
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| 173 | fits_report_error(stderr,status);
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| 174 | throw IOExc("FitsFile:: error FITSIO status");
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| 175 | }
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| 176 | return;
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| 177 | }
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[903] | 178 |
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[1136] | 179 | void FitsFile::printerror(int& status, char* texte)
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| 180 | //*****************************************************/
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| 181 | //* Print out cfitsio error messages and exit program */
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| 182 | //*****************************************************/
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| 183 | {
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| 184 | // print out cfitsio error messages and exit program
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| 185 | // print error report
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[1235] | 186 | fits_report_error(stderr, status);
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[1136] | 187 | cout << " erreur:: " << texte << endl;
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| 188 | throw IOExc("FitsFile:: error FITSIO status");
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| 189 | }
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[1703] | 190 | void FitsFile::printerrorAndContinue(int& status, char* texte)
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| 191 | //*****************************************************/
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| 192 | //* Print out cfitsio error messages and exit program */
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| 193 | //*****************************************************/
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| 194 | {
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| 195 | // print out cfitsio error messages and exit program
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| 196 | // print error report
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| 197 | fits_report_error(stderr, status);
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| 198 | cout << " erreur:: " << texte << endl;
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| 199 | // throw IOExc("FitsFile:: error FITSIO status");
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| 200 | }
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[1136] | 201 |
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| 202 | void FitsFile::ResetStatus(int& status)
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| 203 | {
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| 204 | fits_status_ = status;
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| 205 | status = 0;
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[1235] | 206 | fits_clear_errmsg();
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[1136] | 207 | }
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| 208 |
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[1209] | 209 | string FitsFile::GetErrStatus(int status)
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[1136] | 210 | {
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| 211 | char text[31];
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| 212 | fits_get_errstatus(status, text);
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| 213 | return string(text);
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| 214 | }
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| 215 |
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[1218] | 216 | /*!
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| 217 | \class SOPHYA::FitsInFile
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[1371] | 218 | \ingroup FitsIOServer
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[1246] | 219 | class for reading SOPHYA objects from FITS Format Files (uses cfitsio lib)
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[1218] | 220 | */
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| 221 |
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[1136] | 222 | FitsInFile::FitsInFile()
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| 223 | {
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| 224 | InitNull();
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| 225 | }
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[1218] | 226 |
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[1231] | 227 | FitsInFile::FitsInFile(string const & flnm)
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[1136] | 228 | {
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[1175] | 229 | InitNull();
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| 230 | int status = 0;
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[1231] | 231 | fits_open_file(&fptr_,flnm.c_str(),READONLY,&status);
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| 232 | if( status ) printerror( status );
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| 233 | }
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| 234 |
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| 235 | FitsInFile::FitsInFile(const char * flnm)
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| 236 | {
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| 237 | InitNull();
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| 238 | int status = 0;
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[1175] | 239 | fits_open_file(&fptr_,flnm,READONLY,&status);
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| 240 | if( status ) printerror( status );
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[1136] | 241 | }
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| 242 |
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| 243 |
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| 244 | void FitsInFile::InitNull()
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| 245 | {
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[1300] | 246 | imageDataType_ = FitsDataType_NULL;
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[1045] | 247 | naxis_ = 0;
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| 248 | nbData_ = 0;
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| 249 | nrows_ = 0;
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| 250 | nbcols_ = 0;
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| 251 | naxisn_.clear();
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| 252 | repeat_.clear();
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| 253 | noms_.clear();
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| 254 | taille_des_chaines_.clear();
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| 255 | dvl_.Clear();
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[1978] | 256 |
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| 257 | dnull_ = 1.e-300;
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| 258 | fnull_ = 1.e-33;
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| 259 | inull_= 99999;
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| 260 | cnull_= string("xxx");
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[1175] | 261 |
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[1978] | 262 |
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[1045] | 263 | }
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| 264 |
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[1218] | 265 | //////////////////////////////////////////////////////////
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| 266 | // methods with general purpose
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| 267 | /////////////////////////////////////////////////////////
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[1045] | 268 |
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[1136] | 269 | int FitsInFile::NbBlocks(char flnm[])
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[903] | 270 | {
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| 271 | int status = 0;
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| 272 | int nbhdu = 0;
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| 273 | fitsfile* fileptr;
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| 274 | fits_open_file(&fileptr,flnm,READONLY,&status);
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| 275 | if( status ) printerror( status, "NbBlocks: erreur ouverture fichier" );
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| 276 | fits_get_num_hdus(fileptr, &nbhdu, &status);
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| 277 | fits_close_file(fileptr,&status);
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| 278 | return nbhdu;
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| 279 | }
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[1334] | 280 | int FitsInFile::NbBlocks()
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| 281 | {
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| 282 | int status = 0;
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| 283 | int nbhdu = 0;
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| 284 | fits_get_num_hdus(fptr_, &nbhdu, &status);
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| 285 | return nbhdu;
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| 286 | }
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[903] | 287 |
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[1231] | 288 | void FitsInFile::GetBlockType(char flnm[], int hdunum, FitsExtensionType& typeOfExtension, int& naxis, vector<int>& naxisn, FitsDataType& dataType, DVList& dvl )
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[903] | 289 | {
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| 290 | int status = 0;
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| 291 | fitsfile* fileptr;
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| 292 | fits_open_file(&fileptr,flnm,READONLY,&status);
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[1209] | 293 | if( status ) printerror( status, "GetBlockType: erreur ouverture fichier" );
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[903] | 294 | // move to the specified HDU number
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| 295 | int hdutype = 0;
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| 296 | fits_movabs_hdu(fileptr,hdunum,&hdutype,&status);
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[1209] | 297 | if( status ) printerror( status,"GetBlockType: erreur movabs");
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[903] | 298 | if(hdutype == IMAGE_HDU)
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| 299 | {
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[1231] | 300 | typeOfExtension = FitsExtensionType_IMAGE;
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[1300] | 301 | GetImageParameters (fileptr, dataType, naxis, naxisn);
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[903] | 302 | }
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| 303 | else
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| 304 | if(hdutype == ASCII_TBL || hdutype == BINARY_TBL)
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| 305 | {
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| 306 | int nrows = 0;
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| 307 | vector<string> noms;
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[1300] | 308 | vector<FitsDataType> types;
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[903] | 309 | vector<int> taille_des_chaines;
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[971] | 310 | GetBinTabParameters(fileptr, naxis, nrows, naxisn, noms, types, taille_des_chaines);
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| 311 | int k;
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| 312 | for (k=0; k< naxisn.size(); k++) naxisn[k] *= nrows;
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[903] | 313 | if(hdutype == ASCII_TBL)
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| 314 | {
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[1231] | 315 | typeOfExtension = FitsExtensionType_ASCII_TBL;
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| 316 | dataType = FitsDataType_ASCII;
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[903] | 317 | }
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| 318 | else
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| 319 | {
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[1231] | 320 | typeOfExtension = FitsExtensionType_BINARY_TBL;
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[1300] | 321 | dataType = types[0];
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[903] | 322 | }
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| 323 | }
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| 324 | else
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| 325 | {
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| 326 | cout << " hdutype= " << hdutype << endl;
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[1209] | 327 | throw IOExc("FitsFile::GetBlockType: this HDU type is unknown");
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[903] | 328 | }
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| 329 |
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[971] | 330 | KeywordsIntoDVList(fileptr, dvl, hdunum);
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[903] | 331 | fits_close_file(fileptr,&status);
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| 332 | }
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| 333 |
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[1136] | 334 |
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[1300] | 335 | void FitsInFile::ReadHeader(int hdunum)
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[1045] | 336 | {
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[1300] | 337 | // InitNull();
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[1045] | 338 | int status = 0;
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[1334] | 339 | if (hdunum<0)
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| 340 | {
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[1703] | 341 | throw PException(" FitsInFile::ReadHeader : hdu number must be not negative");
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[1334] | 342 | }
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[1234] | 343 | if (hdunum != 0 ) hdunum_ = hdunum;
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| 344 |
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| 345 | // si le numero de header non precise
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| 346 | else
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[1045] | 347 | {
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[1234] | 348 | // si c'est le premier objet a lire
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| 349 | if (hdunum_ == 0)
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[1045] | 350 | {
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[1234] | 351 | // on calcule le numero de header a lire
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[1246] | 352 | if (imageOnPrimary_ == true ) hdunum_ = 1;
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[1234] | 353 | else hdunum_ = 2;
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[1045] | 354 | }
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[1234] | 355 | // sinon objet suivant
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| 356 | else hdunum_++;
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[1045] | 357 | }
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[1771] | 358 | getHeaderWithSophyaObject();
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[1334] | 359 | if ( hdutype_ == FitsExtensionType_NULL )
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| 360 | {
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| 361 | if (hdunum == 0 && hdunum_ == 1)
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| 362 | {
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| 363 | hdunum_++;
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[1771] | 364 | getHeaderWithSophyaObject();
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[1334] | 365 | }
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| 366 | else
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| 367 | {
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| 368 | cout << " WARNING (FitsInFile::ReadHeader) : no SOPHYA object on HDU number : " << hdunum_ << endl;
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| 369 | }
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| 370 | }
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[1418] | 371 | if ( hdutype_ == FitsExtensionType_EOF )
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| 372 | {
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| 373 | throw PException("FitsFile::ReadHeader, attempt to read through EOF");
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| 374 | }
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[1045] | 375 | }
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| 376 |
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[1354] | 377 | string FitsInFile::getStringKeyword(int hdunum, string keyw, int& retStatus)
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| 378 | {
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| 379 | string s;
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| 380 | retStatus = 0;
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| 381 | int status = 0;
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| 382 | if (hdunum != hdunum_ )
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| 383 | {
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| 384 | int hdutype;
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| 385 | fits_movabs_hdu(fptr_,hdunum,&hdutype,&status);
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| 386 | }
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| 387 |
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| 388 | char value[FLEN_VALUE];
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| 389 | char* keyname= const_cast<char*>(keyw.c_str());
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| 390 | fits_read_key_str(fptr_,keyname,value,NULL,&status);
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| 391 | if (status == 0)
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| 392 | s = string(value);
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| 393 | else retStatus = status;
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| 394 | if (hdunum != hdunum_ )
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| 395 | {
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| 396 | int hdutype;
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| 397 | if (hdunum_ != 0)
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| 398 | fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
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| 399 | else fits_movabs_hdu(fptr_,1,&hdutype,&status);
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| 400 |
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| 401 | }
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| 402 | return s;
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| 403 | }
|
---|
| 404 | bool FitsInFile::hasKeyword(int hdunum, string keyw)
|
---|
[1353] | 405 | {
|
---|
| 406 | bool has=false;
|
---|
| 407 | int status = 0;
|
---|
| 408 | if (hdunum != hdunum_ )
|
---|
| 409 | {
|
---|
| 410 | int hdutype;
|
---|
| 411 | fits_movabs_hdu(fptr_,hdunum,&hdutype,&status);
|
---|
| 412 | }
|
---|
[1218] | 413 |
|
---|
[1353] | 414 | char value[FLEN_VALUE];
|
---|
| 415 | char* keyname= const_cast<char*>(keyw.c_str());
|
---|
| 416 | fits_read_keyword(fptr_,keyname,value,NULL,&status);
|
---|
| 417 | if (status == 0)
|
---|
| 418 | has = true;
|
---|
| 419 | else
|
---|
| 420 | if (status == KEY_NO_EXIST ) status =0;
|
---|
| 421 | else fits_report_error(stderr,status);
|
---|
| 422 | if (hdunum != hdunum_ )
|
---|
| 423 | {
|
---|
| 424 | int hdutype;
|
---|
| 425 | if (hdunum_ != 0)
|
---|
| 426 | fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
|
---|
| 427 | else fits_movabs_hdu(fptr_,1,&hdutype,&status);
|
---|
| 428 |
|
---|
| 429 | }
|
---|
| 430 | return has;
|
---|
| 431 | }
|
---|
| 432 |
|
---|
[1771] | 433 | void FitsInFile::GetKeywordsFromHeader (int hdunum, list<FitsKeyword>& mots_cles) const
|
---|
| 434 | {
|
---|
| 435 | int status = 0;
|
---|
| 436 | int hdutype;
|
---|
| 437 | fits_movabs_hdu(fptr_,hdunum,&hdutype,&status);
|
---|
| 438 | if( status ) fits_report_error(stderr,status);
|
---|
| 439 |
|
---|
| 440 | // get number of keywords
|
---|
| 441 | int nkeys,keypos;
|
---|
| 442 | fits_get_hdrpos(fptr_, &nkeys, &keypos,&status);
|
---|
| 443 | if( status ) fits_report_error(stderr,status);
|
---|
| 444 | // shift with the number of mandatory keywords
|
---|
| 445 | int num= 0;
|
---|
| 446 | // if primary header
|
---|
| 447 | if (hdunum == 1)
|
---|
| 448 | {
|
---|
| 449 | // read NAXIS
|
---|
| 450 | int naxis=0;
|
---|
| 451 | fits_read_key(fptr_,TINT,"NAXIS",&naxis,NULL,&status);
|
---|
| 452 | // number of mandatory keywords
|
---|
| 453 | num = naxis+3;
|
---|
| 454 | }
|
---|
| 455 | // extensions
|
---|
| 456 | else
|
---|
| 457 | {
|
---|
| 458 | if (hdutype == IMAGE_HDU)
|
---|
| 459 | {
|
---|
| 460 | // read NAXIS
|
---|
| 461 | int naxis=0;
|
---|
| 462 | fits_read_key(fptr_,TINT,"NAXIS",&naxis,NULL,&status);
|
---|
| 463 | // number of mandatory keywords
|
---|
| 464 | num = naxis+5;
|
---|
| 465 | }
|
---|
| 466 | else
|
---|
| 467 | if(hdutype == ASCII_TBL || hdutype == BINARY_TBL)
|
---|
| 468 | {
|
---|
| 469 | // number of mandatory keywords
|
---|
| 470 | num = 8;
|
---|
| 471 | }
|
---|
| 472 | }
|
---|
| 473 | int j;
|
---|
| 474 | char keyname[LEN_KEYWORD];
|
---|
| 475 | char value[FLEN_VALUE];
|
---|
| 476 | char comment[FLEN_COMMENT];
|
---|
| 477 | for(j = num+1; j <= nkeys; j++)
|
---|
| 478 | {
|
---|
| 479 | char dtype;
|
---|
| 480 | fits_read_keyn(fptr_,j,keyname,value,comment,&status);
|
---|
| 481 | if(status)
|
---|
| 482 | {
|
---|
| 483 | fits_report_error(stderr,status);
|
---|
| 484 | status=0;
|
---|
| 485 | }
|
---|
| 486 | string kn(keyname);
|
---|
| 487 | string cm(comment);
|
---|
| 488 | string val(value);
|
---|
| 489 | FitsKeyword kw(kn, val, cm);
|
---|
| 490 | mots_cles.push_back(kw);
|
---|
| 491 | }
|
---|
| 492 | if (hdunum_ > 0) fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
|
---|
| 493 |
|
---|
| 494 | }
|
---|
[1300] | 495 | void FitsInFile::GetImageParameters (fitsfile* fileptr,FitsDataType& dataType,int& naxis,vector<int>& naxisn)
|
---|
[1218] | 496 | {
|
---|
| 497 | int hdunum=0;
|
---|
[1334] | 498 | // cout << " Reading a FITS image in HDU : " << fits_get_hdu_num(fileptr,&hdunum) << endl;
|
---|
[1218] | 499 | int status= 0;
|
---|
| 500 |
|
---|
| 501 | // bits per pixels
|
---|
[1300] | 502 | int bitpix=0;
|
---|
[1218] | 503 | fits_read_key(fileptr,TINT,"BITPIX",&bitpix,NULL,&status);
|
---|
| 504 | if( status ) printerror( status );
|
---|
[1300] | 505 | if(bitpix == DOUBLE_IMG) dataType = FitsDataType_double;
|
---|
| 506 | else if(bitpix == FLOAT_IMG) dataType = FitsDataType_float;
|
---|
| 507 | else if(bitpix == LONG_IMG || bitpix == SHORT_IMG ) dataType = FitsDataType_int;
|
---|
| 508 | else if (bitpix == BYTE_IMG) dataType = FitsDataType_char;
|
---|
| 509 | else
|
---|
| 510 | {
|
---|
| 511 | cout << " bitpix= " << bitpix << endl;
|
---|
| 512 | throw PException(" FitsFile::GetImageParameters : unsupported FITS data type");
|
---|
| 513 | }
|
---|
[1218] | 514 |
|
---|
| 515 | // number of dimensions in the FITS array
|
---|
| 516 | naxis= 0;
|
---|
| 517 | fits_read_key(fileptr,TINT,"NAXIS",&naxis,NULL,&status);
|
---|
| 518 | if( status ) printerror( status );
|
---|
| 519 | // read the NAXISn keywords to get image size
|
---|
| 520 | long* naxes = new long[naxis] ;
|
---|
| 521 | int nfound;
|
---|
| 522 | fits_read_keys_lng(fileptr,"NAXIS",1,naxis,naxes,&nfound,&status);
|
---|
| 523 | if( status ) printerror( status );
|
---|
| 524 | if (nfound != naxis )
|
---|
| 525 | cout << " WARNING : " << nfound << " axes found, expected naxis= " << naxis << endl;
|
---|
| 526 | int k;
|
---|
| 527 | for (k=0; k<naxis; k++)
|
---|
| 528 | {
|
---|
| 529 | naxisn.push_back( (int)naxes[k] );
|
---|
| 530 | }
|
---|
| 531 | delete [] naxes;
|
---|
| 532 | }
|
---|
| 533 |
|
---|
| 534 |
|
---|
| 535 |
|
---|
| 536 |
|
---|
| 537 | /*! \fn DVList SOPHYA::FitsInFile::DVListFromPrimaryHeader() const
|
---|
| 538 |
|
---|
| 539 | \return the keywords of primary header in a DVList
|
---|
| 540 |
|
---|
| 541 | */
|
---|
[1143] | 542 | DVList FitsInFile::DVListFromPrimaryHeader() const
|
---|
| 543 | {
|
---|
| 544 | int status;
|
---|
| 545 | DVList dvl;
|
---|
| 546 | KeywordsIntoDVList(fptr_, dvl, 1);
|
---|
| 547 | int hdutype = 0;
|
---|
| 548 | if (hdunum_ > 0) fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
|
---|
| 549 | return dvl;
|
---|
| 550 | }
|
---|
[1136] | 551 |
|
---|
[1771] | 552 | void FitsInFile::getHeaderWithSophyaObject()
|
---|
[971] | 553 | {
|
---|
[1300] | 554 | // si hdunum_ > 1 lit le header correspondant
|
---|
| 555 | // si hdunum_ = 1 se positionne au (et lit le) premier header qui
|
---|
| 556 | // contient reellement un objet
|
---|
[1234] | 557 | int status=0;
|
---|
| 558 | if (hdunum_ < 1) throw PException(" attempt to read hdunum < 1");
|
---|
[1300] | 559 | InitNull();
|
---|
[1234] | 560 | if (hdunum_ == 1)
|
---|
[839] | 561 | {
|
---|
[1234] | 562 | // presence of image ?
|
---|
| 563 | int naxis= 0;
|
---|
| 564 | fits_read_key(fptr_,TINT,"NAXIS",&naxis,NULL,&status);
|
---|
| 565 | if( status ) printerror( status );
|
---|
| 566 | if (naxis > 0 ) // there is an image
|
---|
| 567 | {
|
---|
[1334] | 568 | hdutype_ = FitsExtensionType_IMAGE;
|
---|
[1300] | 569 | GetImageParameters (fptr_, imageDataType_, naxis_, naxisn_);
|
---|
[1234] | 570 | nbData_ = 1;
|
---|
| 571 | int k;
|
---|
| 572 | for (k=0; k<naxis_; k++) if (naxisn_[k] > 0) nbData_ *= naxisn_[k];
|
---|
| 573 | KeywordsIntoDVList(fptr_, dvl_,hdunum_);
|
---|
| 574 | }
|
---|
| 575 | else
|
---|
| 576 | {
|
---|
[1334] | 577 | hdutype_ = FitsExtensionType_NULL;
|
---|
| 578 | KeywordsIntoDVList(fptr_, dvl_,hdunum_);
|
---|
[1234] | 579 | }
|
---|
[839] | 580 | }
|
---|
[1234] | 581 | else
|
---|
[839] | 582 | {
|
---|
[1234] | 583 | int hdutype;
|
---|
| 584 | fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
|
---|
[1334] | 585 |
|
---|
| 586 | if( status )
|
---|
[1234] | 587 | {
|
---|
[1334] | 588 | if (status == END_OF_FILE)
|
---|
| 589 | {
|
---|
| 590 | hdutype_= FitsExtensionType_EOF;
|
---|
| 591 | status =0;
|
---|
| 592 | return;
|
---|
| 593 | }
|
---|
| 594 | else
|
---|
| 595 | {
|
---|
[1771] | 596 | cout << "WARNING (FitsInFile::getHeaderWithSophyaObject) : error during movabs" << endl;
|
---|
[1334] | 597 | hdutype_= FitsExtensionType_ERROR;
|
---|
| 598 | status =0;
|
---|
| 599 | return;
|
---|
| 600 | }
|
---|
| 601 | // printerror( status,":FitsInFile::getHeader : erreur movabs");
|
---|
| 602 | }
|
---|
| 603 | if(hdutype == IMAGE_HDU)
|
---|
| 604 | {
|
---|
| 605 | hdutype_= FitsExtensionType_IMAGE;
|
---|
[1300] | 606 | GetImageParameters (fptr_, imageDataType_, naxis_, naxisn_);
|
---|
[1234] | 607 | nbData_ = 1;
|
---|
| 608 | int k;
|
---|
| 609 | for (k=0; k<naxis_; k++) if (naxisn_[k] > 0) nbData_ *= naxisn_[k];
|
---|
| 610 | KeywordsIntoDVList(fptr_, dvl_,hdunum_);
|
---|
| 611 | }
|
---|
[1334] | 612 | else if(hdutype == ASCII_TBL)
|
---|
[1234] | 613 | {
|
---|
[1334] | 614 | hdutype_= FitsExtensionType_ASCII_TBL;
|
---|
[1234] | 615 | GetBinTabParameters(fptr_,nbcols_, nrows_,repeat_, noms_, types_, taille_des_chaines_);
|
---|
| 616 | KeywordsIntoDVList(fptr_, dvl_, hdunum_);
|
---|
| 617 | }
|
---|
[1334] | 618 | else if(hdutype == BINARY_TBL)
|
---|
| 619 | {
|
---|
| 620 | hdutype_= FitsExtensionType_BINARY_TBL;
|
---|
| 621 | GetBinTabParameters(fptr_,nbcols_, nrows_,repeat_, noms_, types_, taille_des_chaines_);
|
---|
| 622 | KeywordsIntoDVList(fptr_, dvl_, hdunum_);
|
---|
| 623 | }
|
---|
| 624 | else
|
---|
| 625 | {
|
---|
| 626 | hdutype_= FitsExtensionType_NULL;
|
---|
| 627 | KeywordsIntoDVList(fptr_, dvl_, hdunum_);
|
---|
| 628 | }
|
---|
[839] | 629 | }
|
---|
[971] | 630 | }
|
---|
[839] | 631 |
|
---|
[1136] | 632 |
|
---|
[1234] | 633 | void FitsInFile::moveToFollowingHeader()
|
---|
| 634 | {
|
---|
| 635 | int status = 0;
|
---|
| 636 | hdunum_++;
|
---|
[1771] | 637 | getHeaderWithSophyaObject();
|
---|
[1334] | 638 | if ( hdutype_ == FitsExtensionType_NULL )
|
---|
| 639 | {
|
---|
| 640 | cout << " WARNING (FitsInFile::ReadHeader) : no SOPHYA object on HDU number : " << hdunum_ << endl;
|
---|
| 641 |
|
---|
| 642 | }
|
---|
[1234] | 643 | }
|
---|
[1218] | 644 |
|
---|
| 645 |
|
---|
| 646 |
|
---|
[1234] | 647 |
|
---|
| 648 |
|
---|
[1218] | 649 | /*! \fn int SOPHYA::FitsInFile::NbColsFromFits() const
|
---|
| 650 | \return number of columns (return 1 if IMAGE)
|
---|
| 651 | */
|
---|
[1136] | 652 | int FitsInFile::NbColsFromFits() const
|
---|
[839] | 653 | {
|
---|
[1334] | 654 | if(hdutype_ == FitsExtensionType_BINARY_TBL) return nbcols_;
|
---|
[971] | 655 | else
|
---|
[1334] | 656 | if(hdutype_ == FitsExtensionType_ASCII_TBL || hdutype_ == FitsExtensionType_IMAGE) return 1;
|
---|
[839] | 657 | else
|
---|
| 658 | {
|
---|
[1379] | 659 | cout << " hdutype= " << (int) hdutype_ << endl;
|
---|
[1334] | 660 | throw PException("FitsFile::NbColsFromFits, HDU not supported");
|
---|
[839] | 661 | }
|
---|
| 662 | }
|
---|
| 663 |
|
---|
[1218] | 664 | /*! \fn int SOPHYA::FitsInFile::NentriesFromFits(int nocol) const
|
---|
| 665 | \return number of data in the current IMAGE extension on FITS file, or number
|
---|
| 666 | of data of column number 'nocol' of the current BINTABLE extension
|
---|
| 667 | */
|
---|
[1136] | 668 | int FitsInFile::NentriesFromFits(int nocol) const
|
---|
[839] | 669 | {
|
---|
[1334] | 670 | if(hdutype_ == FitsExtensionType_BINARY_TBL) return nrows_*repeat_[nocol];
|
---|
[1136] | 671 | else
|
---|
[1334] | 672 | if(hdutype_ == FitsExtensionType_ASCII_TBL) return nrows_;
|
---|
[1136] | 673 | else
|
---|
[1334] | 674 | if(hdutype_ == FitsExtensionType_IMAGE) return nbData_;
|
---|
[1136] | 675 | else
|
---|
[839] | 676 | {
|
---|
[1379] | 677 | cout << "hdutype= " << (int) hdutype_ << endl;
|
---|
[1334] | 678 | throw PException("FitsFile::NentriesFromFits, this HDU is not supported");
|
---|
[839] | 679 | }
|
---|
| 680 | }
|
---|
| 681 |
|
---|
[1218] | 682 | /*! \fn char SOPHYA::FitsInFile::ColTypeFromFits(int nocol) const
|
---|
| 683 |
|
---|
| 684 | return a character denoting data type of column number 'nocol' in a BINTABLE :
|
---|
| 685 |
|
---|
| 686 | D : double
|
---|
| 687 |
|
---|
| 688 | E : float
|
---|
| 689 |
|
---|
| 690 | I : integer
|
---|
| 691 |
|
---|
| 692 | S : character string
|
---|
| 693 |
|
---|
| 694 | */
|
---|
| 695 |
|
---|
[1300] | 696 | FitsFile::FitsDataType FitsInFile::ColTypeFromFits(int nocol) const
|
---|
[839] | 697 | {
|
---|
[1334] | 698 | if(hdutype_ != FitsExtensionType_ASCII_TBL && hdutype_ != FitsExtensionType_BINARY_TBL)
|
---|
[839] | 699 | {
|
---|
[1136] | 700 | throw IOExc("FitsFile::TypeFromFits, this HDU is not an ASCII table nor a binary table");
|
---|
[839] | 701 | }
|
---|
[1136] | 702 | return types_[nocol];
|
---|
[839] | 703 | }
|
---|
[1218] | 704 |
|
---|
| 705 |
|
---|
| 706 | /*! \fn string SOPHYA::FitsInFile::ColNameFromFits(int nocol) const
|
---|
| 707 |
|
---|
| 708 | \return name of the column number 'nocol' of the current BINTABLE extension
|
---|
| 709 | */
|
---|
| 710 |
|
---|
[1136] | 711 | string FitsInFile::ColNameFromFits(int nocol) const
|
---|
[839] | 712 | {
|
---|
[1334] | 713 | if(hdutype_ != FitsExtensionType_ASCII_TBL && hdutype_ != FitsExtensionType_BINARY_TBL)
|
---|
[1045] | 714 | {
|
---|
[1136] | 715 | throw IOExc("FitsFile::TypeFromFits, this HDU is not an ASCII table nor a binary table");
|
---|
[1045] | 716 | }
|
---|
[1136] | 717 | return noms_[nocol];
|
---|
[839] | 718 | }
|
---|
| 719 |
|
---|
[1218] | 720 | /*! \fn int DSOPHYA::FitsInFile::ColStringLengthFromFits(int nocol) const
|
---|
| 721 |
|
---|
| 722 | \return number of characters of each data for the column number 'nocol' (if char* typed) of the current BINTABLE extension
|
---|
| 723 | */
|
---|
| 724 |
|
---|
[1136] | 725 | int FitsInFile::ColStringLengthFromFits(int nocol) const
|
---|
[839] | 726 | {
|
---|
[1334] | 727 | if(hdutype_ != FitsExtensionType_ASCII_TBL && hdutype_ != FitsExtensionType_BINARY_TBL)
|
---|
[1136] | 728 | {
|
---|
| 729 | throw IOExc("FitsFile::TypeFromFits, this HDU is not an ASCII table nor a binary table");
|
---|
| 730 | }
|
---|
| 731 | int index=-1;
|
---|
| 732 | int k;
|
---|
| 733 | for (k=0; k<=nocol; k++)
|
---|
| 734 | {
|
---|
[1300] | 735 | if (types_[k] == FitsDataType_char) index++;
|
---|
[1136] | 736 | }
|
---|
| 737 | return taille_des_chaines_[index];
|
---|
[839] | 738 | }
|
---|
[1218] | 739 |
|
---|
| 740 |
|
---|
| 741 |
|
---|
| 742 | /*! \fn void SOPHYA::FitsInFile::GetBinTabLine(int NoLine, double* ddata, float* fdata, int* idata, char ** cdata)
|
---|
| 743 |
|
---|
| 744 | Get the NoLine-th 'line' from the current BINTABLE extension on FITS file,
|
---|
| 745 | */
|
---|
| 746 |
|
---|
[1193] | 747 | void FitsInFile::GetBinTabLine(int NoLine, double* ddata, float* fdata, int* idata, char ** cdata)
|
---|
[839] | 748 | {
|
---|
| 749 | int status= 0;
|
---|
[1978] | 750 | int anynul;
|
---|
| 751 | double dnull= dnull_;
|
---|
| 752 | float fnull= fnull_;
|
---|
| 753 | int inull= inull_;
|
---|
| 754 | char* cnull= const_cast<char*>(cnull_.c_str());
|
---|
[1136] | 755 | int dcount = 0.;
|
---|
| 756 | int fcount = 0.;
|
---|
| 757 | int icount = 0;
|
---|
| 758 | int ccount =0;
|
---|
| 759 | int ncol;
|
---|
| 760 | long nels=1;
|
---|
[1499] | 761 | int ligneAsolue = NoLine+1;
|
---|
[1136] | 762 | for (ncol=0; ncol<nbcols_; ncol++)
|
---|
[861] | 763 | {
|
---|
[1499] | 764 | int repetition =repeat_[ncol];
|
---|
| 765 | int ligneALire = ligneAsolue/repetition;
|
---|
| 766 | int premierElement = ligneAsolue-ligneALire*repetition;
|
---|
| 767 | if (premierElement != 0 )
|
---|
| 768 | {
|
---|
| 769 | ligneALire++;
|
---|
| 770 | }
|
---|
| 771 | else premierElement = repetition;
|
---|
| 772 |
|
---|
[1136] | 773 | switch (types_[ncol])
|
---|
| 774 | {
|
---|
[1300] | 775 | case FitsDataType_double :
|
---|
[1499] | 776 | {
|
---|
[1978] | 777 | fits_read_col(fptr_,TDOUBLE,ncol+1,ligneALire,premierElement,1,&dnull,&ddata[dcount++],&anynul,&status);
|
---|
[1136] | 778 | break;
|
---|
[1499] | 779 | }
|
---|
| 780 | case FitsDataType_float :
|
---|
[1978] | 781 | fits_read_col(fptr_,TFLOAT,ncol+1,ligneALire,premierElement,1,&fnull,&fdata[fcount++],&anynul,&status);
|
---|
[1136] | 782 | break;
|
---|
[1300] | 783 | case FitsDataType_int :
|
---|
[1499] | 784 | fits_read_col(fptr_,TINT,ncol+1,ligneALire,premierElement,1,&inull,&idata[icount++],
|
---|
[1978] | 785 | &anynul,&status);
|
---|
[1136] | 786 | break;
|
---|
[1499] | 787 | case FitsDataType_long :
|
---|
[1978] | 788 | fits_read_col(fptr_,TLONG,ncol+1,ligneALire,premierElement,1,&inull,&idata[icount++], &anynul,&status);
|
---|
[2129] | 789 | break;
|
---|
[1499] | 790 | case FitsDataType_byte :
|
---|
| 791 | {
|
---|
| 792 | unsigned char uschar = 0;
|
---|
[1978] | 793 | fits_read_col(fptr_,TBYTE,ncol+1,ligneALire,premierElement,1,&inull,&uschar, &anynul,&status);
|
---|
[1499] | 794 | idata[icount++] = (int)uschar;
|
---|
| 795 | }
|
---|
| 796 | break;
|
---|
[1300] | 797 | case FitsDataType_char :
|
---|
[1978] | 798 | fits_read_col(fptr_,TSTRING,ncol+1,ligneALire,premierElement,1,cnull,&cdata[ccount++],&anynul,&status);
|
---|
[1136] | 799 | break;
|
---|
| 800 | }
|
---|
| 801 | if (status)
|
---|
| 802 | {
|
---|
| 803 | ResetStatus(status);
|
---|
| 804 | break;
|
---|
| 805 | }
|
---|
[861] | 806 | }
|
---|
[903] | 807 | }
|
---|
[839] | 808 |
|
---|
[1218] | 809 | /*! \fn void SOPHYA::FitsInFile::GetBinTabLine(long NoLine, BnTblLine& ligne)
|
---|
| 810 | Get the NoLine-th 'line' from the current BINTABLE extension on FITS file,
|
---|
| 811 | */
|
---|
[1193] | 812 | void FitsInFile::GetBinTabLine(long NoLine, BnTblLine& ligne)
|
---|
| 813 | {
|
---|
| 814 | int status= 0;
|
---|
[1978] | 815 | int anynul;
|
---|
| 816 | double dnull= dnull_;
|
---|
| 817 | float fnull= fnull_;
|
---|
| 818 | int inull= inull_;
|
---|
| 819 | char* cnull= const_cast<char*>(cnull_.c_str());
|
---|
[1193] | 820 | int dcount = 0.;
|
---|
| 821 | int fcount = 0.;
|
---|
| 822 | int icount = 0;
|
---|
| 823 | int ccount =0;
|
---|
| 824 | int ncol;
|
---|
| 825 | long nels=1;
|
---|
| 826 | for (ncol=0; ncol<nbcols_; ncol++)
|
---|
| 827 | {
|
---|
| 828 | switch (types_[ncol])
|
---|
| 829 | {
|
---|
[1300] | 830 | case FitsDataType_double :
|
---|
[1978] | 831 | fits_read_col(fptr_,TDOUBLE,ncol+1,NoLine+1,1,1,&dnull,&ligne.ddata_[dcount++],&anynul,&status);
|
---|
[1300] | 832 | break;
|
---|
| 833 | case FitsDataType_float :
|
---|
[1978] | 834 | fits_read_col(fptr_,TFLOAT,ncol+1,NoLine+1,1,1,&fnull,&ligne.fdata_[fcount++],&anynul,&status);
|
---|
[1193] | 835 | break;
|
---|
[1300] | 836 | case FitsDataType_int :
|
---|
[1978] | 837 | fits_read_col(fptr_,TINT,ncol+1,NoLine+1,1,1,&inull,&ligne.idata_[icount++], &anynul,&status);
|
---|
[1193] | 838 | break;
|
---|
[1359] | 839 | case FitsDataType_long :
|
---|
[1978] | 840 | fits_read_col(fptr_,TLONG,ncol+1,NoLine+1,1,1,&inull,&ligne.ldata_[icount++], &anynul,&status);
|
---|
[1359] | 841 | break;
|
---|
| 842 | case FitsDataType_byte :
|
---|
[1978] | 843 | fits_read_col(fptr_,TBYTE,ncol+1,NoLine+1,1,1,&inull,&ligne.bdata_[icount++], &anynul,&status);
|
---|
[1359] | 844 | break;
|
---|
[1300] | 845 | case FitsDataType_char :
|
---|
[1193] | 846 | char* chaine = new char[taille_des_chaines_[ccount]];
|
---|
[1978] | 847 | fits_read_col(fptr_,TSTRING,ncol+1,NoLine+1,1,1,cnull,&chaine,&anynul,&status);
|
---|
[1193] | 848 | ligne.cdata_[ccount++] = string(chaine);
|
---|
| 849 | break;
|
---|
| 850 | }
|
---|
| 851 | if (status)
|
---|
| 852 | {
|
---|
| 853 | ResetStatus(status);
|
---|
| 854 | break;
|
---|
| 855 | }
|
---|
| 856 | }
|
---|
| 857 | }
|
---|
| 858 |
|
---|
[1218] | 859 | /*! \fn void SOPHYA::FitsInFile::GetBinTabLine(int NoLine, float* fdata)
|
---|
| 860 |
|
---|
| 861 | Get the NoLine-th float 'line' from the current BINTABLE extension on FITS file,
|
---|
| 862 | */
|
---|
[1136] | 863 | void FitsInFile::GetBinTabLine(int NoLine, float* fdata)
|
---|
[903] | 864 | {
|
---|
[1136] | 865 | int status= 0;
|
---|
[1978] | 866 | int anynul;
|
---|
| 867 | float fnull= fnull_;
|
---|
[1136] | 868 | long nels=1;
|
---|
| 869 | int ncol;
|
---|
| 870 | for (ncol=0; ncol<nbcols_; ncol++)
|
---|
[861] | 871 | {
|
---|
[1978] | 872 | fits_read_col(fptr_,TFLOAT,ncol+1,NoLine+1,1,1,&fnull,&fdata[ncol],&anynul,&status);
|
---|
[1136] | 873 | if (status)
|
---|
[903] | 874 | {
|
---|
[1136] | 875 | ResetStatus(status);
|
---|
| 876 | break;
|
---|
[903] | 877 | }
|
---|
[1136] | 878 | }
|
---|
| 879 | }
|
---|
[839] | 880 |
|
---|
[903] | 881 |
|
---|
[1218] | 882 | /*! \fn void SPOPHYA::FitsInFile::GetBinTabFCol(double* valeurs,int nentries, int NoCol) const
|
---|
| 883 |
|
---|
| 884 | fill the array 'valeurs' with double data from the current BINTABLE extension on FITS file, from column number 'NoCol'
|
---|
| 885 |
|
---|
| 886 | \param <nentries> number of data to be read
|
---|
| 887 | */
|
---|
[1379] | 888 | void FitsInFile::GetBinTabFCol(r_8* valeurs,int nentries, int NoCol) const
|
---|
[839] | 889 | {
|
---|
| 890 | int status= 0;
|
---|
| 891 | int DTYPE;
|
---|
| 892 | long repeat,width;
|
---|
| 893 | fits_get_coltype(fptr_, NoCol+1,&DTYPE,&repeat,&width,&status);
|
---|
| 894 | if( DTYPE != TDOUBLE)
|
---|
| 895 | {
|
---|
[1045] | 896 | if (DTYPE == TFLOAT) cout << " WARNING: reading double from float : conversion will be made by fitsio library" << endl;
|
---|
| 897 | else
|
---|
| 898 | throw IOExc("FitsFile::GetBinTabFCol, tentative de lecture non double");
|
---|
[839] | 899 | }
|
---|
| 900 | long nels=nentries;
|
---|
[1978] | 901 | int anynul;
|
---|
| 902 | double dnull= dnull_;
|
---|
| 903 |
|
---|
[839] | 904 | fits_read_col(fptr_,TDOUBLE,NoCol+1,1,1,nels,&dnull,valeurs,
|
---|
[1978] | 905 | &anynul,&status);
|
---|
[1703] | 906 | if( status )
|
---|
| 907 | {
|
---|
| 908 | printerrorAndContinue( status,"erreur lecture de colonne" );
|
---|
| 909 | }
|
---|
[839] | 910 | }
|
---|
| 911 |
|
---|
[1218] | 912 | /*! \fn void SOPHYA::FitsInFile::GetBinTabFCol(float* valeurs,int nentries, int NoCol) const
|
---|
| 913 |
|
---|
| 914 | same as previous method with float data
|
---|
| 915 | */
|
---|
[1379] | 916 | void FitsInFile::GetBinTabFCol(r_4* valeurs,int nentries, int NoCol) const
|
---|
[839] | 917 | {
|
---|
| 918 | int status= 0;
|
---|
| 919 | int DTYPE;
|
---|
| 920 | long repeat,width;
|
---|
| 921 | fits_get_coltype(fptr_, NoCol+1,&DTYPE,&repeat,&width,&status);
|
---|
| 922 | if( DTYPE != TFLOAT)
|
---|
| 923 | {
|
---|
[1045] | 924 | if (DTYPE == TDOUBLE) cout << " WARNING: reading float from double : conversion will be made by fitsio library" << endl;
|
---|
| 925 | else
|
---|
| 926 | throw IOExc("FitsFile::GetBinTabFCol, tentative de lecture non float");
|
---|
[839] | 927 | }
|
---|
| 928 | long nels=nentries;
|
---|
[1978] | 929 | int anynul;
|
---|
| 930 | float fnull= fnull_;
|
---|
[839] | 931 | fits_read_col(fptr_,TFLOAT,NoCol+1,1,1,nels,&fnull,valeurs,
|
---|
[1978] | 932 | &anynul,&status);
|
---|
[1703] | 933 | if( status ) printerrorAndContinue( status,"erreur lecture de colonne" );
|
---|
[839] | 934 | }
|
---|
[1136] | 935 |
|
---|
[1218] | 936 | /*! \fn void SOPHYA::FitsInFile::GetBinTabFCol(int* valeurs,int nentries, int NoCol) const
|
---|
| 937 |
|
---|
| 938 | same as previous method with int data
|
---|
| 939 | */
|
---|
| 940 |
|
---|
[1379] | 941 | void FitsInFile::GetBinTabFCol(int_4* valeurs,int nentries, int NoCol) const
|
---|
[839] | 942 | {
|
---|
| 943 | int status= 0;
|
---|
| 944 | int DTYPE;
|
---|
| 945 | long repeat,width;
|
---|
| 946 | fits_get_coltype(fptr_, NoCol+1,&DTYPE,&repeat,&width,&status);
|
---|
[1752] | 947 | cout << " en lecture fits trouve le type " << DTYPE << endl;
|
---|
| 948 | if( DTYPE != TLONG && DTYPE != TINT)
|
---|
[839] | 949 | {
|
---|
[1752] | 950 | throw IOExc("FitsFile::GetBinTabFCol, probleme de lecture d'entiers");
|
---|
[839] | 951 | }
|
---|
| 952 | long nels=nentries;
|
---|
[1978] | 953 | int anynul;
|
---|
| 954 | int inull= inull_;
|
---|
[1752] | 955 |
|
---|
| 956 |
|
---|
| 957 |
|
---|
| 958 | // voir commentaire dans putColToFits()
|
---|
[839] | 959 | fits_read_col(fptr_,TINT,NoCol+1,1,1,nels,&inull,valeurs,
|
---|
[1978] | 960 | &anynul,&status);
|
---|
[1703] | 961 | if( status ) printerrorAndContinue( status,"erreur lecture de colonne" );
|
---|
[839] | 962 | }
|
---|
[1136] | 963 |
|
---|
[1218] | 964 | /*! \fn void SOPHYA::FitsInFile::GetBinTabFCol(char** valeurs, int nentries, int NoCol) const
|
---|
| 965 |
|
---|
| 966 | same as previous method with char* data
|
---|
| 967 | */
|
---|
| 968 |
|
---|
[1136] | 969 | void FitsInFile::GetBinTabFCol(char** valeurs, int nentries, int NoCol) const
|
---|
[839] | 970 | {
|
---|
| 971 | int status= 0;
|
---|
| 972 | int DTYPE;
|
---|
| 973 | long repeat,width;
|
---|
| 974 | fits_get_coltype(fptr_, NoCol+1,&DTYPE,&repeat,&width,&status);
|
---|
[1300] | 975 | if( DTYPE != TSTRING && DTYPE != TBYTE)
|
---|
[839] | 976 | {
|
---|
[1300] | 977 | throw IOExc("FitsFile::GetBinTabFCol, tentative de lecture non string");
|
---|
[839] | 978 | }
|
---|
| 979 | long nels=nentries;
|
---|
[1978] | 980 | int anynul;
|
---|
| 981 | char* cnull= const_cast<char*>(cnull_.c_str());
|
---|
[839] | 982 | long frow=1;
|
---|
| 983 | long felem=1;
|
---|
| 984 | fits_read_col(fptr_,TSTRING,NoCol+1,frow,felem,nels,cnull,valeurs,
|
---|
[1978] | 985 | &anynul,&status);
|
---|
[1703] | 986 | if( status ) printerrorAndContinue( status,"erreur lecture de colonne" );
|
---|
[839] | 987 | }
|
---|
[1045] | 988 |
|
---|
[1218] | 989 | /*! \fn void SOPHYA::FitsInFile::GetSingleColumn(double* map, int nentries) const
|
---|
| 990 | fill the array 'map' with double data from the current extension on FITS file.
|
---|
| 991 | If the extension is BINTABLE, the first column is provided.
|
---|
| 992 |
|
---|
| 993 | \param <nentries> number of data to be read
|
---|
| 994 | */
|
---|
[1379] | 995 | void FitsInFile::GetSingleColumn(r_8* map, int nentries) const
|
---|
[1136] | 996 | {
|
---|
| 997 | int status = 0;
|
---|
[1334] | 998 | if(hdutype_ == FitsExtensionType_IMAGE)
|
---|
[1045] | 999 | {
|
---|
[1136] | 1000 |
|
---|
[1300] | 1001 | if(imageDataType_ != FitsDataType_double)
|
---|
[1047] | 1002 | {
|
---|
[1136] | 1003 | cout << " The data type on fits file is not double...";
|
---|
| 1004 | cout << " Conversion to double achieved by cfitsio lib" << endl;
|
---|
[1047] | 1005 | }
|
---|
[1136] | 1006 |
|
---|
[1978] | 1007 | int anynul;
|
---|
| 1008 | double dnull= dnull_;
|
---|
[1136] | 1009 |
|
---|
| 1010 | long nels= nentries;
|
---|
[1978] | 1011 | fits_read_img(fptr_,TDOUBLE,1,nels,&dnull,map,&anynul,&status);
|
---|
[1136] | 1012 | if( status ) printerror( status );
|
---|
[1045] | 1013 | }
|
---|
[1136] | 1014 | else
|
---|
[1334] | 1015 | if(hdutype_ == FitsExtensionType_ASCII_TBL || hdutype_ == FitsExtensionType_BINARY_TBL)
|
---|
[1136] | 1016 | {
|
---|
| 1017 | GetBinTabFCol(map,nentries, 0);
|
---|
| 1018 | }
|
---|
| 1019 | else
|
---|
| 1020 | {
|
---|
[1379] | 1021 | cout << " hdutype= " << (int) hdutype_ << endl;
|
---|
[1334] | 1022 | throw IOExc("FitsFile::GetSingleColumn, this HDU is unknown");
|
---|
[1136] | 1023 | }
|
---|
[1045] | 1024 | }
|
---|
| 1025 |
|
---|
[1218] | 1026 | /*! \fn void SOPHYA::FitsInFile::GetSingleColumn(float* map, int nentries) const
|
---|
| 1027 | same as above with float data
|
---|
| 1028 | */
|
---|
[1379] | 1029 | void FitsInFile::GetSingleColumn(r_4* map, int nentries) const
|
---|
[1045] | 1030 | {
|
---|
[1136] | 1031 | int status = 0;
|
---|
[1334] | 1032 | if(hdutype_ == FitsExtensionType_IMAGE)
|
---|
[1045] | 1033 | {
|
---|
[1300] | 1034 | if(imageDataType_ != FitsDataType_float)
|
---|
[1047] | 1035 | {
|
---|
[1136] | 1036 | cout << " The data type on fits file is not float ";
|
---|
| 1037 | cout << " Conversion to float achieved by cfitsio lib" << endl;
|
---|
[1047] | 1038 | }
|
---|
[1978] | 1039 | int anynul;
|
---|
| 1040 | float fnull= fnull_;
|
---|
[1136] | 1041 |
|
---|
| 1042 | long nels= nentries;
|
---|
[1978] | 1043 | fits_read_img(fptr_,TFLOAT,1,nels,&fnull, map,&anynul,&status);
|
---|
[1136] | 1044 | if( status ) printerror( status );
|
---|
[1045] | 1045 | }
|
---|
[839] | 1046 | else
|
---|
[1334] | 1047 | if(hdutype_ == FitsExtensionType_ASCII_TBL || hdutype_ == FitsExtensionType_BINARY_TBL)
|
---|
[1136] | 1048 | {
|
---|
| 1049 | GetBinTabFCol(map,nentries, 0);
|
---|
| 1050 | }
|
---|
[839] | 1051 | else
|
---|
| 1052 | {
|
---|
[1379] | 1053 | cout << " hdutype= " << (int) hdutype_ << endl;
|
---|
[1136] | 1054 | throw IOExc("FitsFile::GetSingleColumn this HDU is unknown");
|
---|
[839] | 1055 | }
|
---|
| 1056 | }
|
---|
| 1057 |
|
---|
[1218] | 1058 | /*! \fn void SOPHYA::FitsInFile::GetSingleColumn( int* map, int nentries) const
|
---|
| 1059 | same as above with int data
|
---|
| 1060 | */
|
---|
[1379] | 1061 | void FitsInFile::GetSingleColumn( int_4* map, int nentries) const
|
---|
[839] | 1062 | {
|
---|
[1136] | 1063 | int status = 0;
|
---|
[1334] | 1064 | if(hdutype_ == FitsExtensionType_IMAGE)
|
---|
[839] | 1065 | {
|
---|
[1300] | 1066 | if(imageDataType_ != FitsDataType_int)
|
---|
[1136] | 1067 | {
|
---|
| 1068 | cout << " The data type on fits file is not int ";
|
---|
| 1069 | cout << " Conversion to float achieved by cfitsio lib" << endl;
|
---|
| 1070 | }
|
---|
[1978] | 1071 | int anynul;
|
---|
| 1072 | float fnull= fnull_;
|
---|
[1136] | 1073 |
|
---|
| 1074 | long nels= nentries;
|
---|
[1978] | 1075 | fits_read_img(fptr_,TINT,1,nels,&fnull,map,&anynul,&status);
|
---|
[1136] | 1076 | if( status ) printerror( status );
|
---|
[839] | 1077 | }
|
---|
| 1078 | else
|
---|
[1334] | 1079 | if(hdutype_ == FitsExtensionType_ASCII_TBL || hdutype_ == FitsExtensionType_BINARY_TBL)
|
---|
[1136] | 1080 | {
|
---|
| 1081 | GetBinTabFCol(map,nentries, 0);
|
---|
| 1082 | }
|
---|
[839] | 1083 | else
|
---|
[1136] | 1084 | {
|
---|
[1379] | 1085 | cout << " hdutype= " << (int) hdutype_ << endl;
|
---|
[1136] | 1086 | throw IOExc("FitsFile::GetSingleColumn this HDU is unknown");
|
---|
| 1087 | }
|
---|
[839] | 1088 | }
|
---|
| 1089 |
|
---|
[1136] | 1090 | void FitsInFile::GetBinTabParameters(fitsfile* fileptr, int& nbcols, int& nrows,
|
---|
[903] | 1091 | vector<int>& repeat,
|
---|
| 1092 | vector<string>& noms,
|
---|
[1300] | 1093 | vector<FitsDataType>& types,
|
---|
[903] | 1094 | vector<int>& taille_des_chaines)
|
---|
[839] | 1095 | {
|
---|
| 1096 | int status= 0;
|
---|
[903] | 1097 | int hdunum=0;
|
---|
| 1098 | int hdutype=0;
|
---|
| 1099 | fits_get_hdu_num(fileptr,&hdunum);
|
---|
| 1100 | fits_get_hdu_type(fileptr, &hdutype, &status);
|
---|
| 1101 |
|
---|
| 1102 | if(hdutype != ASCII_TBL && hdutype != BINARY_TBL)
|
---|
[839] | 1103 | {
|
---|
[903] | 1104 | throw IOExc("FitsFile::GetBinTabParameters this HDU is not an ASCII table nor a binary table");
|
---|
[839] | 1105 | }
|
---|
[1334] | 1106 | // if(hdutype == ASCII_TBL)
|
---|
| 1107 | // cout << " Reading a FITS ascii table in HDU : " << hdunum << endl;
|
---|
| 1108 | // if(hdutype == BINARY_TBL)
|
---|
| 1109 | // cout << " Reading a FITS binary table in HDU : " << hdunum << endl;
|
---|
[839] | 1110 |
|
---|
| 1111 | // get the number of columns
|
---|
[903] | 1112 | fits_get_num_cols(fileptr, &nbcols,&status);
|
---|
[839] | 1113 | if( status ) printerror( status );
|
---|
| 1114 |
|
---|
| 1115 | // get the number of rows
|
---|
| 1116 | long naxis2= 0;
|
---|
[903] | 1117 | fits_get_num_rows(fileptr,&naxis2,&status);
|
---|
[839] | 1118 | if( status ) printerror( status );
|
---|
[903] | 1119 | nrows = (int)naxis2;
|
---|
[839] | 1120 |
|
---|
| 1121 | // get the datatype, names and the repeat count
|
---|
[903] | 1122 | noms.clear();
|
---|
| 1123 | noms.reserve(nbcols);
|
---|
| 1124 | types.clear();
|
---|
| 1125 | types.reserve(nbcols);
|
---|
| 1126 | repeat.clear();
|
---|
| 1127 | repeat.reserve(nbcols);
|
---|
| 1128 | taille_des_chaines.clear();
|
---|
[839] | 1129 | char **ttype = new char*[nbcols];
|
---|
[923] | 1130 | int ii;
|
---|
[1175] | 1131 | //
|
---|
| 1132 | //
|
---|
[923] | 1133 | for (ii=0; ii < nbcols; ii++) ttype[ii]=new char[FLEN_VALUE];
|
---|
[839] | 1134 | int nfound;
|
---|
[903] | 1135 | fits_read_keys_str(fileptr, "TTYPE",1,nbcols,ttype,&nfound, &status);
|
---|
[839] | 1136 | if( status ) printerror( status,"erreur lecture des noms de colonne");
|
---|
| 1137 | int rept=0;
|
---|
[1300] | 1138 | if(hdutype == ASCII_TBL)
|
---|
[839] | 1139 | {
|
---|
[1300] | 1140 | for(ii = 0; ii < nbcols; ii++)
|
---|
[839] | 1141 | {
|
---|
[1300] | 1142 | int DTYPE;
|
---|
| 1143 | long width;
|
---|
| 1144 | long repete = 0;
|
---|
| 1145 | fits_get_coltype(fileptr,ii+1,&DTYPE,&repete,&width,&status);
|
---|
| 1146 | if( status ) printerror( status,"erreur lecture type de colonne");
|
---|
| 1147 | rept = repete;
|
---|
| 1148 | noms.push_back(string(ttype[ii]));
|
---|
| 1149 | switch (DTYPE)
|
---|
| 1150 | {
|
---|
| 1151 | case TDOUBLE :
|
---|
| 1152 | types.push_back(FitsDataType_double);
|
---|
| 1153 | break;
|
---|
| 1154 | case TFLOAT :
|
---|
| 1155 | types.push_back(FitsDataType_float);
|
---|
| 1156 | break;
|
---|
| 1157 | case TLONG :
|
---|
[1359] | 1158 | types.push_back(FitsDataType_long);
|
---|
[1300] | 1159 | break;
|
---|
| 1160 | case TSHORT :
|
---|
| 1161 | types.push_back(FitsDataType_int);
|
---|
| 1162 | break;
|
---|
| 1163 | case TSTRING :
|
---|
| 1164 | types.push_back(FitsDataType_char);
|
---|
| 1165 | taille_des_chaines.push_back(width);
|
---|
| 1166 | rept/=width;
|
---|
| 1167 | break;
|
---|
| 1168 | default :
|
---|
| 1169 | cout << " field " << ii+1 << " DTYPE= " << DTYPE << endl;
|
---|
| 1170 | throw IOExc("FitsFile::GetBinTabParameters, unsupported data type of field, for ASCII table");
|
---|
| 1171 | }
|
---|
| 1172 | repeat.push_back(rept);
|
---|
[839] | 1173 | }
|
---|
[1136] | 1174 | }
|
---|
[1300] | 1175 | else
|
---|
| 1176 | {
|
---|
| 1177 | for(ii = 0; ii < nbcols; ii++)
|
---|
| 1178 | {
|
---|
| 1179 | int DTYPE;
|
---|
| 1180 | long width;
|
---|
| 1181 | long repete = 0;
|
---|
| 1182 | fits_get_coltype(fileptr,ii+1,&DTYPE,&repete,&width,&status);
|
---|
| 1183 | if( status ) printerror( status,"erreur lecture type de colonne");
|
---|
| 1184 | rept = repete;
|
---|
| 1185 | noms.push_back(string(ttype[ii]));
|
---|
| 1186 | switch (DTYPE)
|
---|
| 1187 | {
|
---|
| 1188 | case TDOUBLE :
|
---|
| 1189 | types.push_back(FitsDataType_double);
|
---|
| 1190 | break;
|
---|
| 1191 | case TFLOAT :
|
---|
| 1192 | types.push_back(FitsDataType_float);
|
---|
| 1193 | break;
|
---|
| 1194 | case TLONG :
|
---|
[1359] | 1195 | types.push_back(FitsDataType_long);
|
---|
[1300] | 1196 | break;
|
---|
| 1197 | case TINT :
|
---|
| 1198 | types.push_back(FitsDataType_int);
|
---|
| 1199 | break;
|
---|
| 1200 | case TSHORT :
|
---|
| 1201 | types.push_back(FitsDataType_int);
|
---|
| 1202 | break;
|
---|
| 1203 | case TSTRING :
|
---|
| 1204 | types.push_back(FitsDataType_char);
|
---|
| 1205 | taille_des_chaines.push_back(width);
|
---|
| 1206 | rept/=width;
|
---|
| 1207 | break;
|
---|
| 1208 | case TBYTE :
|
---|
[1359] | 1209 | types.push_back(FitsDataType_byte);
|
---|
[1300] | 1210 | break;
|
---|
| 1211 | default :
|
---|
| 1212 | cout << " field " << ii+1 << " DTYPE= " << DTYPE << endl;
|
---|
| 1213 | throw IOExc("FitsFile::GetBinTabParameters, unsupported data type of field, for BINTABLE");
|
---|
| 1214 | }
|
---|
| 1215 | repeat.push_back(rept);
|
---|
| 1216 | }
|
---|
| 1217 | }
|
---|
[1136] | 1218 | for (ii=0; ii < nbcols; ii++) delete [] ttype[ii];
|
---|
| 1219 | delete [] ttype;
|
---|
| 1220 | }
|
---|
| 1221 |
|
---|
| 1222 | void FitsInFile::KeywordsIntoDVList(fitsfile* fileptr, DVList& dvl, int hdunum)
|
---|
| 1223 | {
|
---|
| 1224 | int status = 0;
|
---|
| 1225 | int hdutype;
|
---|
| 1226 | fits_movabs_hdu(fileptr,hdunum,&hdutype,&status);
|
---|
| 1227 | if( status ) printerror( status,":KeywordsIntoDVList : erreur movabs");
|
---|
| 1228 | // get number of keywords
|
---|
| 1229 | int nkeys,keypos;
|
---|
| 1230 | fits_get_hdrpos(fileptr,&nkeys,&keypos,&status);
|
---|
| 1231 | if( status ) printerror( status );
|
---|
| 1232 |
|
---|
| 1233 | // put keywords in a DVList object
|
---|
| 1234 | char keyname[LEN_KEYWORD]= "";
|
---|
| 1235 | char strval[FLEN_VALUE]= "";
|
---|
| 1236 | char dtype;
|
---|
| 1237 | char card[FLEN_CARD];
|
---|
| 1238 | char *comkey = "COMMENT";
|
---|
[1143] | 1239 | char comment[FLEN_COMMENT];
|
---|
[1136] | 1240 |
|
---|
| 1241 | // shift with the number of mandatory keywords
|
---|
[1143] | 1242 | // int num= 8;
|
---|
| 1243 | int num= 0;
|
---|
| 1244 | // primary header
|
---|
| 1245 | if (hdunum == 1)
|
---|
| 1246 | {
|
---|
| 1247 | // read NAXIS
|
---|
| 1248 | int naxis=0;
|
---|
| 1249 | fits_read_key(fileptr,TINT,"NAXIS",&naxis,NULL,&status);
|
---|
| 1250 | // number of mandatory keywords
|
---|
| 1251 | num = naxis+3;
|
---|
| 1252 | }
|
---|
| 1253 | // extensions
|
---|
| 1254 | else
|
---|
| 1255 | {
|
---|
| 1256 | if (hdutype == IMAGE_HDU)
|
---|
| 1257 | {
|
---|
| 1258 | // read NAXIS
|
---|
| 1259 | int naxis=0;
|
---|
| 1260 | fits_read_key(fileptr,TINT,"NAXIS",&naxis,NULL,&status);
|
---|
| 1261 | // number of mandatory keywords
|
---|
| 1262 | num = naxis+5;
|
---|
| 1263 | }
|
---|
| 1264 | else
|
---|
| 1265 | if(hdutype == ASCII_TBL || hdutype == BINARY_TBL)
|
---|
| 1266 | {
|
---|
| 1267 | // number of mandatory keywords
|
---|
| 1268 | num = 8;
|
---|
| 1269 | }
|
---|
| 1270 | }
|
---|
[1136] | 1271 | int j;
|
---|
| 1272 | for(j = num+1; j <= nkeys; j++)
|
---|
| 1273 | {
|
---|
| 1274 | fits_read_keyn(fileptr,j,card,strval,NULL,&status);
|
---|
| 1275 | if(status) printerror(status);
|
---|
| 1276 |
|
---|
| 1277 | strncpy(keyname,card,LEN_KEYWORD-1);
|
---|
| 1278 | if(strncmp(keyname,comkey,LEN_KEYWORD-1) != 0 && strlen(keyname) != 0
|
---|
| 1279 | && strlen(strval) != 0)
|
---|
| 1280 | {
|
---|
| 1281 | fits_get_keytype(strval,&dtype,&status);
|
---|
| 1282 | if(status) printerror(status);
|
---|
| 1283 |
|
---|
| 1284 | strip(keyname, 'B',' ');
|
---|
| 1285 | strip(strval, 'B',' ');
|
---|
| 1286 | strip(strval, 'B','\'');
|
---|
| 1287 |
|
---|
| 1288 | switch( dtype )
|
---|
| 1289 | {
|
---|
| 1290 | case 'C':
|
---|
[1143] | 1291 | fits_read_key(fileptr,TSTRING,keyname,strval,comment,&status);
|
---|
[1978] | 1292 | if ( strncmp(keyname,"TTYPE",5) == 0 ||
|
---|
| 1293 | strncmp(keyname,"TFORM",5) == 0 ||
|
---|
| 1294 | strncmp(keyname,"TBCOL",5) == 0 ) break;
|
---|
[1143] | 1295 | dvl[keyname]= strval;
|
---|
| 1296 | dvl.SetComment(keyname, comment);
|
---|
[1136] | 1297 | break;
|
---|
| 1298 | case 'I':
|
---|
| 1299 | int ival;
|
---|
[1143] | 1300 | fits_read_key(fileptr,TINT,keyname,&ival,comment,&status);
|
---|
[1136] | 1301 | dvl[keyname]= (int_4) ival; // Portage mac DY
|
---|
[1143] | 1302 | dvl.SetComment(keyname, comment);
|
---|
[1136] | 1303 | break;
|
---|
| 1304 | case 'L':
|
---|
| 1305 | int ilog;
|
---|
[1143] | 1306 | fits_read_key(fileptr,TLOGICAL,keyname,&ilog,comment,&status);
|
---|
[1136] | 1307 | dvl[keyname]= (int_4) ilog;
|
---|
[1143] | 1308 | dvl.SetComment(keyname, comment);
|
---|
[1136] | 1309 | break;
|
---|
| 1310 | case 'F':
|
---|
| 1311 | double dval;
|
---|
[1143] | 1312 | fits_read_key(fileptr,TDOUBLE,keyname,&dval,comment,&status);
|
---|
[1136] | 1313 | dvl[keyname]= dval;
|
---|
[1143] | 1314 | dvl.SetComment(keyname, comment);
|
---|
[1136] | 1315 | break;
|
---|
| 1316 | }
|
---|
| 1317 |
|
---|
| 1318 | }
|
---|
[839] | 1319 | }
|
---|
[1978] | 1320 | // dvl.Print();
|
---|
[1136] | 1321 | }
|
---|
| 1322 |
|
---|
[1218] | 1323 |
|
---|
| 1324 | /*!
|
---|
| 1325 | \class SOPHYA::FitsOutFile
|
---|
[1371] | 1326 | \ingroup FitsIOServer
|
---|
[1218] | 1327 | Class for loading SOPHYA objects from FITS Format Files (uses cfitsio lib)
|
---|
| 1328 | */
|
---|
| 1329 |
|
---|
[1136] | 1330 | FitsOutFile::FitsOutFile()
|
---|
| 1331 | {
|
---|
[1193] | 1332 | InitNull();
|
---|
[903] | 1333 | }
|
---|
[839] | 1334 |
|
---|
[1218] | 1335 | /*! \fn SOPHYA::FitsOutFile::FitsOutFile(char flnm[], WriteMode wrm)
|
---|
| 1336 |
|
---|
| 1337 | \param <WriteMode> enum , WriteMode = clear -> if alreadyy exists, the file will be overwritten (else created) ; WriteMode = append -> further objects will be appended to the file if it exists (else : file created). WriteMode = unknown -> file created if does not exist, else : exception. (the last situation is the default)
|
---|
| 1338 |
|
---|
| 1339 | */
|
---|
[1231] | 1340 |
|
---|
| 1341 | FitsOutFile::FitsOutFile(string const & flnm, WriteMode wrm)
|
---|
[1136] | 1342 | {
|
---|
[1231] | 1343 | InitNull();
|
---|
| 1344 | openoutputfitsfile(flnm.c_str(), wrm);
|
---|
| 1345 | }
|
---|
[839] | 1346 |
|
---|
[1231] | 1347 | FitsOutFile::FitsOutFile(const char * flnm, WriteMode wrm)
|
---|
| 1348 | {
|
---|
[1136] | 1349 | InitNull();
|
---|
[1231] | 1350 | openoutputfitsfile(flnm, wrm);
|
---|
| 1351 | }
|
---|
| 1352 |
|
---|
| 1353 | void FitsOutFile::openoutputfitsfile(const char * flnm, WriteMode wrm)
|
---|
| 1354 | {
|
---|
[1136] | 1355 | int status = 0;
|
---|
[839] | 1356 |
|
---|
[1136] | 1357 | // create new FITS file
|
---|
[1183] | 1358 | fits_create_file(&fptr_,flnm,&status);
|
---|
| 1359 | if( status )
|
---|
[1136] | 1360 | {
|
---|
[1193] | 1361 |
|
---|
| 1362 | switch (wrm)
|
---|
| 1363 | {
|
---|
[1183] | 1364 | // si on veut ecrire a la fin de ce fichier
|
---|
[1193] | 1365 | case append :
|
---|
[1183] | 1366 | status = 0;
|
---|
[1235] | 1367 | fits_clear_errmsg();
|
---|
[1183] | 1368 | fits_open_file(&fptr_,flnm,READWRITE,&status);
|
---|
| 1369 | if( status )
|
---|
| 1370 | {
|
---|
| 1371 | cout << " error opening file: " << flnm << endl;
|
---|
| 1372 | printerror(status, "failure opening a file supposed to exist");
|
---|
| 1373 | }
|
---|
| 1374 | else cout << " file " << flnm << " opened, new objects will be appended " << endl;
|
---|
| 1375 | fits_get_num_hdus(fptr_, &hdunum_, &status);
|
---|
| 1376 | int hdutype;
|
---|
| 1377 | fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
|
---|
| 1378 | if( status ) printerror( status,":FitsFile::WriteF : erreur movabs");
|
---|
[1193] | 1379 | break;
|
---|
| 1380 |
|
---|
| 1381 | case clear :
|
---|
[1183] | 1382 | {
|
---|
| 1383 | status = 0;
|
---|
[1235] | 1384 | fits_clear_errmsg();
|
---|
[1183] | 1385 | char* newname = new char[strlen(flnm)+1];
|
---|
| 1386 | //
|
---|
| 1387 | newname[0] = '!';
|
---|
| 1388 | newname[1] = '\0';
|
---|
| 1389 | strcat(newname, flnm);
|
---|
| 1390 | fits_create_file(&fptr_,newname,&status);
|
---|
[1193] | 1391 | delete [] newname;
|
---|
[1183] | 1392 | if (status)
|
---|
| 1393 | {
|
---|
| 1394 | cout << " error opening file: " << flnm << endl;
|
---|
| 1395 | printerror(status, "unable to open file, supposed to exist");
|
---|
| 1396 | }
|
---|
[1193] | 1397 | else cout << " WARNING : file " << flnm << " is overwritten " << endl;
|
---|
| 1398 | break;
|
---|
[1183] | 1399 | }
|
---|
[1193] | 1400 | case unknown :
|
---|
| 1401 | printerror(status, " file seems already to exist");
|
---|
| 1402 | break;
|
---|
[1183] | 1403 |
|
---|
[1193] | 1404 | }
|
---|
[1136] | 1405 | }
|
---|
| 1406 | }
|
---|
| 1407 |
|
---|
| 1408 |
|
---|
| 1409 |
|
---|
[1218] | 1410 | /*! \fn void SOPHYA::FitsOutFile::makeHeaderImageOnFits(char type, int nbdim, int* naxisn, DVList &dvl)
|
---|
| 1411 |
|
---|
| 1412 | create an IMAGE header on FITS file.
|
---|
| 1413 | \param <type> type of data (see method ColTypeFromFits)
|
---|
| 1414 | \param <nbdim> number of dimensions : 1D, 2D, 3D etc. = NAXIS
|
---|
| 1415 | \param <naxisn> array containind sizes of the different dimensions
|
---|
| 1416 | */
|
---|
[1221] | 1417 | void FitsOutFile::makeHeaderImageOnFits(char type, int nbdim, int* naxisn, DVList* ptr_dvl)
|
---|
[1136] | 1418 | {
|
---|
| 1419 | int status = 0;
|
---|
| 1420 | long naxis = nbdim;
|
---|
| 1421 | long* naxes = new long[nbdim];
|
---|
[1246] | 1422 | bool hdunfirst= (hdunum_ == 0);
|
---|
| 1423 | if (hdunfirst)
|
---|
[1136] | 1424 | {
|
---|
[1143] | 1425 | if (imageOnPrimary_ == false)
|
---|
| 1426 | {
|
---|
[1234] | 1427 | hdunum_ = 1;
|
---|
[1143] | 1428 | fits_create_img(fptr_,FLOAT_IMG,0,naxes,&status);
|
---|
[1246] | 1429 | }
|
---|
[1136] | 1430 | }
|
---|
| 1431 | int k;
|
---|
| 1432 | for (k=0; k< nbdim; k++) naxes[k] = (long)naxisn[k];
|
---|
| 1433 | if (type == 'D')
|
---|
| 1434 | fits_create_img(fptr_,DOUBLE_IMG,naxis,naxes,&status);
|
---|
| 1435 | else
|
---|
| 1436 | if (type == 'E')
|
---|
| 1437 | fits_create_img(fptr_,FLOAT_IMG,naxis,naxes,&status);
|
---|
| 1438 | else
|
---|
| 1439 | if (type == 'I')
|
---|
| 1440 | fits_create_img(fptr_,LONG_IMG,naxis,naxes,&status);
|
---|
| 1441 | else
|
---|
| 1442 | {
|
---|
| 1443 | cout << " type of data: " << type << endl;
|
---|
| 1444 | throw PException("FitsFile:::makeHeaderImageOnFits:unprogrammed type of data ");
|
---|
| 1445 | }
|
---|
[1353] | 1446 |
|
---|
[1246] | 1447 | // on ajoute eventuellement un dvlist prepare et la doc SOPHYA
|
---|
[1136] | 1448 | hdunum_++;
|
---|
[1246] | 1449 | if (hdunfirst)
|
---|
| 1450 | {
|
---|
| 1451 | addDVListOnPrimary();
|
---|
| 1452 | writeSignatureOnFits(1);
|
---|
| 1453 | }
|
---|
[1143] | 1454 |
|
---|
[1353] | 1455 | // header format FITS
|
---|
| 1456 |
|
---|
| 1457 | writeAppendedHeaderOnFits();
|
---|
| 1458 |
|
---|
| 1459 | // write supplementary keywords (from SOPHYA)
|
---|
[1143] | 1460 | // dvl.Print();
|
---|
[1221] | 1461 | if (ptr_dvl != NULL) addKeywordsOfDVList(*ptr_dvl);
|
---|
[1143] | 1462 |
|
---|
[1136] | 1463 | delete [] naxes;
|
---|
| 1464 | if( status ) printerror( status, "erreur creation HDU IMAGE" );
|
---|
| 1465 |
|
---|
| 1466 | }
|
---|
[1218] | 1467 |
|
---|
| 1468 |
|
---|
| 1469 | /*! \fn void SOPHYA::FitsOutFile::PutImageToFits(int nbData, double* map) const
|
---|
| 1470 |
|
---|
| 1471 | write double data from array 'map'on an IMAGE extension
|
---|
| 1472 | \param <nbData> number of data to be written
|
---|
| 1473 | */
|
---|
[1379] | 1474 | void FitsOutFile::PutImageToFits(int nbData, r_8* map) const
|
---|
[1136] | 1475 | {
|
---|
| 1476 | int status = 0;
|
---|
| 1477 | long npix= nbData;
|
---|
| 1478 | fits_write_img(fptr_,TDOUBLE,1,npix,map,&status);
|
---|
[1209] | 1479 | if( status ) printerror( status, "erreur ecriture PutImageToFits" );
|
---|
[1136] | 1480 | }
|
---|
| 1481 |
|
---|
[1218] | 1482 | /*! \fn void SOPHYA::FitsOutFile::PutImageToFits(int nbData, float* map) const
|
---|
| 1483 |
|
---|
| 1484 | same as previous method with float data
|
---|
| 1485 | */
|
---|
[1379] | 1486 | void FitsOutFile::PutImageToFits(int nbData, r_4* map) const
|
---|
[1136] | 1487 | {
|
---|
| 1488 | int status = 0;
|
---|
| 1489 | long npix= nbData;
|
---|
| 1490 | fits_write_img(fptr_,TFLOAT,1,npix, map,&status);
|
---|
[1209] | 1491 | if( status ) printerror( status, "erreur ecriture PutImageToFits" );
|
---|
[1136] | 1492 |
|
---|
| 1493 | }
|
---|
[1218] | 1494 |
|
---|
| 1495 | /*! \fn void SOPHYA::FitsOutFile::PutImageToFits( int nbData, int* map) const
|
---|
| 1496 |
|
---|
| 1497 | same as previous method with int data */
|
---|
[1379] | 1498 | void FitsOutFile::PutImageToFits( int nbData, int_4* map) const
|
---|
[1136] | 1499 | {
|
---|
| 1500 | int status = 0;
|
---|
| 1501 |
|
---|
| 1502 | long npix= nbData;
|
---|
| 1503 | fits_write_img(fptr_,TINT,1,npix,map,&status);
|
---|
[1209] | 1504 | if( status ) printerror( status, "erreur ecriture PutImageToFits" );
|
---|
[1136] | 1505 | }
|
---|
| 1506 |
|
---|
| 1507 |
|
---|
| 1508 |
|
---|
[1218] | 1509 | /*! \fn void SOPHYA::FitsOutFile::makeHeaderBntblOnFits( string fieldType, vector<string> Noms, int nentries, int tfields, DVList &dvl, string extname, vector<int> taille_des_chaines)
|
---|
| 1510 |
|
---|
| 1511 | create an BINTABLE header on FITS file.
|
---|
| 1512 | \param <fieldType> array conta
|
---|
| 1513 | ining characters denoting types of the different column (see method ColTypeFromFits)
|
---|
| 1514 | \param <Noms> array of the names of columns
|
---|
| 1515 | \param <nentries> number of data of each column
|
---|
| 1516 | \param <tfields> number of columns
|
---|
| 1517 | \param <dvl> a SOPHYA DVList containing keywords to be appended
|
---|
| 1518 | \param <extname> keyword EXTNAME for FITS file
|
---|
| 1519 | \param <taille_des_chaines> vector containing the number of characters of data for each char* typed column, with order of appearance in 'fieldType'
|
---|
| 1520 | */
|
---|
[1300] | 1521 | void FitsOutFile::makeHeaderBntblOnFits(string fieldType, vector<string> Noms, int nentries, int tfields, DVList* ptr_dvl, string extname, vector<int> taille_des_chaines)
|
---|
[839] | 1522 | {
|
---|
[1209] | 1523 | int k;
|
---|
[839] | 1524 | int status = 0;
|
---|
| 1525 | long nrows;
|
---|
[1300] | 1526 | // verifications de coherences
|
---|
[1209] | 1527 |
|
---|
[1193] | 1528 | if (fieldType.length() != tfields)
|
---|
[839] | 1529 | {
|
---|
[1193] | 1530 | cout << " nombre de champs :" << tfields << "nombre de types: " << fieldType.length() << endl;
|
---|
[1136] | 1531 | throw ParmError("FitsFile:: fields and types don't match");
|
---|
[839] | 1532 |
|
---|
| 1533 | }
|
---|
[1209] | 1534 | if (tfields > Noms.size())
|
---|
| 1535 | {
|
---|
| 1536 | cout << " WARNING: FitsOutFile::makeHeaderBntblOnFits, length of vector of column names not equal to total number of columns" << endl;
|
---|
| 1537 | for (k=0; k<(tfields-Noms.size()); k++) Noms.push_back( string(" "));
|
---|
| 1538 | }
|
---|
| 1539 |
|
---|
| 1540 | // nombre de variables "chaines de caracteres"
|
---|
| 1541 | int nbString = 0;
|
---|
| 1542 | for (k=0; k<tfields;k++) if (fieldType[k] == 'A') nbString++;
|
---|
| 1543 | // coherence de la longueur du vecteur des tailles
|
---|
| 1544 | if (nbString > taille_des_chaines.size())
|
---|
| 1545 | {
|
---|
| 1546 | cout << " WARNING: FitsOutFile::makeHeaderBntblOnFits, length of vector of string lengths not equal to total number of columns" << endl;
|
---|
| 1547 | int strSz=0;
|
---|
| 1548 | for (k=0; k<taille_des_chaines.size(); k++) if ( taille_des_chaines[k] > strSz) strSz = taille_des_chaines[k];
|
---|
| 1549 | for (k=0; k<(nbString-taille_des_chaines.size()); k++) taille_des_chaines.push_back(strSz);
|
---|
| 1550 | }
|
---|
[839] | 1551 | char ** ttype= new char*[tfields];
|
---|
| 1552 | char ** tform= new char*[tfields];
|
---|
| 1553 | char largeur[FLEN_VALUE];
|
---|
| 1554 | int noColString=0;
|
---|
[971] | 1555 | for (k=0; k<tfields;k++)
|
---|
[839] | 1556 | {
|
---|
| 1557 | char format[FLEN_VALUE];
|
---|
| 1558 |
|
---|
| 1559 | if(nentries < 1024)
|
---|
| 1560 | {
|
---|
| 1561 | nrows= nentries;
|
---|
| 1562 | if (fieldType[k] == 'A')
|
---|
| 1563 | {
|
---|
| 1564 | sprintf(largeur,"%d",taille_des_chaines[noColString++]);
|
---|
| 1565 | strcpy(format,largeur);
|
---|
| 1566 | }
|
---|
| 1567 | else strcpy(format,"1");
|
---|
| 1568 | }
|
---|
| 1569 | else
|
---|
| 1570 | {
|
---|
| 1571 | nrows = nentries/1024;
|
---|
| 1572 | if(nentries%1024 != 0) nrows++;
|
---|
| 1573 | if (fieldType[k] == 'A')
|
---|
| 1574 | {
|
---|
[1136] | 1575 | char largaux[FLEN_VALUE];
|
---|
| 1576 | sprintf(largeur,"%d",taille_des_chaines[noColString]);
|
---|
| 1577 | sprintf(largaux,"%d",1024*taille_des_chaines[noColString]);
|
---|
| 1578 | noColString++;
|
---|
| 1579 | strcpy(format, largaux);
|
---|
[839] | 1580 | }
|
---|
| 1581 | else strcpy(format,"1024");
|
---|
| 1582 | }
|
---|
| 1583 | strncat(format,&fieldType[k],1);
|
---|
| 1584 | if (fieldType[k] == 'A')
|
---|
| 1585 | {
|
---|
| 1586 | strcat(format,largeur);
|
---|
| 1587 | }
|
---|
[1193] | 1588 | ttype[k] = const_cast<char*>(Noms[k].c_str());
|
---|
[839] | 1589 | tform[k]= new char[FLEN_VALUE];
|
---|
| 1590 | strcpy(tform[k],format);
|
---|
| 1591 | }
|
---|
[1193] | 1592 | char* extn = const_cast<char*>(extname.c_str());
|
---|
[839] | 1593 |
|
---|
| 1594 | // create a new empty binary table onto the FITS file
|
---|
| 1595 | // physical units if they exist, are defined in the DVList object
|
---|
| 1596 | // so the NULL pointer is given for the tunit parameters.
|
---|
| 1597 | nrows=0;
|
---|
| 1598 | fits_create_tbl(fptr_,BINARY_TBL,nrows,tfields,ttype,tform,
|
---|
| 1599 | NULL,extn,&status);
|
---|
| 1600 | if( status ) printerror( status );
|
---|
[1353] | 1601 |
|
---|
| 1602 | int ii;
|
---|
| 1603 | for(ii = 0; ii < tfields; ii++)
|
---|
| 1604 | {
|
---|
| 1605 | delete [] tform[ii];
|
---|
| 1606 | }
|
---|
| 1607 | delete [] ttype;
|
---|
| 1608 | delete [] tform;
|
---|
| 1609 |
|
---|
| 1610 | // on ajoute eventuellement des mots-cles
|
---|
| 1611 |
|
---|
[1246] | 1612 | if ( hdunum_ == 0 )
|
---|
| 1613 | {
|
---|
| 1614 | hdunum_ = 2;
|
---|
| 1615 | addDVListOnPrimary();
|
---|
| 1616 | writeSignatureOnFits(1);
|
---|
| 1617 | }
|
---|
[1026] | 1618 | else hdunum_++;
|
---|
[1353] | 1619 |
|
---|
| 1620 | // header format FITS
|
---|
| 1621 |
|
---|
| 1622 | writeAppendedHeaderOnFits();
|
---|
| 1623 |
|
---|
| 1624 | // write SOPHYA keywords
|
---|
[1221] | 1625 | if (ptr_dvl != NULL) addKeywordsOfDVList(*ptr_dvl);
|
---|
[839] | 1626 | }
|
---|
| 1627 |
|
---|
[1353] | 1628 |
|
---|
| 1629 |
|
---|
[1218] | 1630 | /*! \fn void SOPHYA::FitsOutFile::PutColToFits(int nocol, int nentries, double* donnees) const
|
---|
| 1631 |
|
---|
| 1632 | write double data from array 'donnees ' on column number 'nocol' of a BINTABLE extension.
|
---|
| 1633 | \param <nentries> number of data to be written
|
---|
| 1634 | */
|
---|
[1353] | 1635 |
|
---|
[1379] | 1636 | void FitsOutFile::PutColToFits(int nocol, int nentries, r_8* donnees) const
|
---|
[839] | 1637 | {
|
---|
| 1638 | int status = 0;
|
---|
[971] | 1639 | int hdutype;
|
---|
[839] | 1640 | fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
|
---|
[1209] | 1641 | if( status ) printerror(status,"PutColToFits: le movabs a foire");
|
---|
[839] | 1642 | fits_get_hdu_type(fptr_, &hdutype, &status);
|
---|
[867] | 1643 | if(hdutype != ASCII_TBL && hdutype != BINARY_TBL)
|
---|
| 1644 | {
|
---|
| 1645 | cout << " hdunum= " << hdunum_ << " hdutype= " << hdutype << endl;
|
---|
[1209] | 1646 | throw IOExc("FitsFile::PutColToFits, this HDU is not an ASCII table nor a binary table");
|
---|
[867] | 1647 | }
|
---|
[839] | 1648 | int code;
|
---|
| 1649 | long repeat, width;
|
---|
| 1650 | fits_get_coltype(fptr_, nocol+1, &code, &repeat,&width, &status);
|
---|
| 1651 | if( code != TDOUBLE)
|
---|
| 1652 | {
|
---|
[1209] | 1653 | cout << " WARNING : types don't match (PutColToFits) : on fits file= " << code << " to be written= DOUBLE " << endl;
|
---|
[839] | 1654 | }
|
---|
[1499] | 1655 | // cout << " 10 elements de colonne " << endl;
|
---|
| 1656 | // for (int toto=0; toto < 10; toto++) cout << donnees[toto] << endl;
|
---|
[839] | 1657 | fits_write_col(fptr_,TDOUBLE,nocol+1,1,1,nentries, donnees ,&status);
|
---|
[1752] | 1658 | if( status ) printerror( status,"erreur ecriture col. double, dans fichier fits" );
|
---|
[839] | 1659 | }
|
---|
[1218] | 1660 |
|
---|
| 1661 |
|
---|
| 1662 |
|
---|
| 1663 | /*! \fn void SOPHYA::FitsOutFile::PutColToFits(int nocol, int nentries, float* donnees) const
|
---|
| 1664 |
|
---|
| 1665 | same as previous method with float data
|
---|
| 1666 | */
|
---|
[1379] | 1667 | void FitsOutFile::PutColToFits(int nocol, int nentries, r_4* donnees) const
|
---|
[839] | 1668 | {
|
---|
| 1669 | int status = 0;
|
---|
| 1670 | int hdutype;
|
---|
| 1671 | fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
|
---|
[1209] | 1672 | if( status ) printerror(status,"PutColToFits: le movabs a foire");
|
---|
[839] | 1673 | fits_get_hdu_type(fptr_, &hdutype, &status);
|
---|
| 1674 | if(hdutype != ASCII_TBL && hdutype != BINARY_TBL)
|
---|
| 1675 | {
|
---|
| 1676 | cout << " hdunum= " << hdunum_ << " hdutype= " << hdutype << endl;
|
---|
[1209] | 1677 | throw IOExc("FitsFile::PutColToFits, this HDU is not an ASCII table nor a binary table");
|
---|
[839] | 1678 | }
|
---|
| 1679 | if(hdutype == ASCII_TBL && nocol>0)
|
---|
| 1680 | {
|
---|
[1209] | 1681 | throw IOExc("FitsFile::PutColToFits, this HDU is an ASCII table, nocol>0 forbidden");
|
---|
[839] | 1682 | }
|
---|
| 1683 | int code;
|
---|
| 1684 | long repeat, width;
|
---|
| 1685 | fits_get_coltype(fptr_, nocol+1, &code, &repeat,&width, &status);
|
---|
| 1686 | if( code != TFLOAT)
|
---|
| 1687 | {
|
---|
[1209] | 1688 | cout << " WARNING : types don't match (PutColToFits) : on fits file= " << code << " (FITS code), to be written= FLOAT " << endl;
|
---|
[839] | 1689 | }
|
---|
| 1690 | fits_write_col(fptr_,TFLOAT,nocol+1,1,1,nentries, donnees ,&status);
|
---|
[1752] | 1691 | if( status ) printerror( status,"erreur ecriture col. floats, dans fichier fits" );
|
---|
[839] | 1692 | }
|
---|
[1218] | 1693 |
|
---|
| 1694 |
|
---|
| 1695 | /*! \fn void FitsOutFile::PutColToFits(int nocol, int nentries, int* donnees) const
|
---|
| 1696 |
|
---|
| 1697 | same as previous method with int data
|
---|
| 1698 | */
|
---|
[1379] | 1699 | void FitsOutFile::PutColToFits(int nocol, int nentries, int_4* donnees) const
|
---|
[839] | 1700 | {
|
---|
| 1701 | int status = 0;
|
---|
| 1702 | int hdutype;
|
---|
| 1703 | fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
|
---|
[1209] | 1704 | if( status ) printerror(status,"PutColToFits: le movabs a foire");
|
---|
[839] | 1705 | fits_get_hdu_type(fptr_, &hdutype, &status);
|
---|
| 1706 | if(hdutype != ASCII_TBL && hdutype != BINARY_TBL)
|
---|
| 1707 | {
|
---|
| 1708 | cout << " hdunum= " << hdunum_ << " hdutype= " << hdutype << endl;
|
---|
[1209] | 1709 | throw IOExc("FitsFile::PutColToFits, this HDU is not an ASCII table nor a binary table");
|
---|
[839] | 1710 | }
|
---|
| 1711 | if(hdutype == ASCII_TBL && nocol>0)
|
---|
| 1712 | {
|
---|
[1209] | 1713 | throw IOExc("FitsFile::PutColToFits, this HDU is an ASCII table, nocol>0 forbidden");
|
---|
[839] | 1714 | }
|
---|
| 1715 | int code;
|
---|
| 1716 | long repeat, width;
|
---|
| 1717 | fits_get_coltype(fptr_, nocol+1, &code, &repeat,&width, &status);
|
---|
[1752] | 1718 |
|
---|
| 1719 |
|
---|
| 1720 | // la logique voudrait qu'on distingue TLONG et TINT. Mais si j'ecris
|
---|
| 1721 | // et relis immediatement quelque chose en TLONG l'experience montre
|
---|
| 1722 | // que ca foire. Donc, je fais tout en TINT, d'ailleurs cfitsio n'a pas
|
---|
| 1723 | // (apparemment) d'entiers de longueur superieure a 32 bits.
|
---|
| 1724 | // En fait, je n'y comprend rien. A suivre (GLM).
|
---|
| 1725 | if (code == TINT || code == TLONG )
|
---|
[839] | 1726 | {
|
---|
[1752] | 1727 | cout << " j'ecris des TINT" << endl;
|
---|
| 1728 | fits_write_col(fptr_,TINT,nocol+1,1,1,nentries, donnees ,&status);
|
---|
| 1729 | }
|
---|
| 1730 | else if (code == TSHORT)
|
---|
| 1731 | {
|
---|
| 1732 | cout << " j'ecris des TSHORT " << endl;
|
---|
| 1733 | fits_write_col(fptr_,TSHORT,nocol+1,1,1,nentries, donnees ,&status);
|
---|
| 1734 | }
|
---|
| 1735 | else
|
---|
| 1736 | {
|
---|
| 1737 | cout << " WARNING : types don't match (PutColToFits) : on fits file= " << code << " (FITS code), to be written= integers " << endl;
|
---|
[839] | 1738 | }
|
---|
[1752] | 1739 | if( status ) printerror( status,"erreur ecriture col. entiers, dans fichier fits" );
|
---|
[839] | 1740 | }
|
---|
[1218] | 1741 |
|
---|
| 1742 |
|
---|
| 1743 | /*! \fn void SOPHYA::FitsOutFile::PutColToFits(int nocol, int nentries, char** donnees) const
|
---|
| 1744 | same as previous method with char* data
|
---|
| 1745 | */
|
---|
[1209] | 1746 | void FitsOutFile::PutColToFits(int nocol, int nentries, char** donnees) const
|
---|
[839] | 1747 | {
|
---|
| 1748 | int status = 0;
|
---|
| 1749 | int hdutype;
|
---|
| 1750 | fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
|
---|
[1209] | 1751 | if( status ) printerror(status,"PutColToFits: le movabs a foire");
|
---|
[839] | 1752 | fits_get_hdu_type(fptr_, &hdutype, &status);
|
---|
| 1753 | if(hdutype != ASCII_TBL && hdutype != BINARY_TBL)
|
---|
| 1754 | {
|
---|
| 1755 | cout << " hdunum= " << hdunum_ << " hdutype= " << hdutype << endl;
|
---|
[1209] | 1756 | throw IOExc("FitsFile::PutColToFits, this HDU is not an ASCII table nor a binary table");
|
---|
[839] | 1757 | }
|
---|
| 1758 | if(hdutype == ASCII_TBL && nocol>0)
|
---|
| 1759 | {
|
---|
[1209] | 1760 | throw IOExc("FitsFile::PutColToFits, this HDU is an ASCII table, nocol>0 forbidden");
|
---|
[839] | 1761 | }
|
---|
| 1762 | int code;
|
---|
| 1763 | long repeat, width;
|
---|
| 1764 | fits_get_coltype(fptr_, nocol+1, &code, &repeat,&width, &status);
|
---|
| 1765 | if( code != TSTRING)
|
---|
| 1766 | {
|
---|
[1209] | 1767 | cout << " WARNING : types don't match (PutColToFits) : on fits file= " << code << " (FITS code), to be written= char** " << endl;
|
---|
[839] | 1768 | }
|
---|
| 1769 | fits_write_col(fptr_,TSTRING,nocol+1,1,1,nentries, donnees ,&status);
|
---|
[1752] | 1770 | if( status ) printerror( status,"erreur ecriture col. chars, dans fichier fits" );
|
---|
[839] | 1771 | }
|
---|
| 1772 |
|
---|
[1209] | 1773 | void FitsOutFile::PutBinTabLine(long NoLine, BnTblLine& ligne) const
|
---|
[1193] | 1774 | {
|
---|
[1209] | 1775 | // on ne fait pas de verification de type, ni de dimension ici, pour
|
---|
| 1776 | // des raisons de performances
|
---|
| 1777 | int k;
|
---|
[1193] | 1778 | int status= 0;
|
---|
[1978] | 1779 | int anynul;
|
---|
[1209] | 1780 | int ncol=0;
|
---|
[1193] | 1781 | long nels=1;
|
---|
[1209] | 1782 | // int nbcols;
|
---|
| 1783 | // fits_get_num_cols(fptr_, &nbcols,&status);
|
---|
| 1784 | for (k=0; k<ligne.ddata_.size(); k++, ncol++)
|
---|
[1193] | 1785 | {
|
---|
[1209] | 1786 | fits_write_col(fptr_,TDOUBLE,ncol+1,NoLine+1,1,1, &ligne.ddata_[k] ,&status);
|
---|
| 1787 | if( status ) printerror( status, "PutBinTabLine : erreur ecriture double" );
|
---|
[1193] | 1788 | }
|
---|
[1209] | 1789 | for (k=0; k<ligne.fdata_.size(); k++, ncol++)
|
---|
| 1790 | {
|
---|
| 1791 | fits_write_col(fptr_,TFLOAT,ncol+1,NoLine+1,1,1, &ligne.fdata_[k] ,&status);
|
---|
| 1792 | if( status ) printerror( status, "PutBinTabLine : erreur ecriture float" );
|
---|
| 1793 | }
|
---|
| 1794 | for (k=0; k<ligne.idata_.size(); k++, ncol++)
|
---|
| 1795 | {
|
---|
| 1796 | fits_write_col(fptr_,TINT,ncol+1,NoLine+1,1,1, &ligne.idata_[k] ,&status);
|
---|
| 1797 | if( status ) printerror( status, "PutBinTabLine : erreur ecriture entier" );
|
---|
| 1798 | }
|
---|
[1359] | 1799 | for (k=0; k<ligne.ldata_.size(); k++, ncol++)
|
---|
| 1800 | {
|
---|
| 1801 | fits_write_col(fptr_,TLONG,ncol+1,NoLine+1,1,1, &ligne.ldata_[k] ,&status);
|
---|
| 1802 | if( status ) printerror( status, "PutBinTabLine : erreur ecriture entier long" );
|
---|
| 1803 | }
|
---|
| 1804 | for (k=0; k<ligne.bdata_.size(); k++, ncol++)
|
---|
| 1805 | {
|
---|
| 1806 | fits_write_col(fptr_,TBYTE,ncol+1,NoLine+1,1,1, &ligne.bdata_[k] ,&status);
|
---|
| 1807 | if( status ) printerror( status, "PutBinTabLine : erreur ecriture byte" );
|
---|
| 1808 | }
|
---|
[1209] | 1809 |
|
---|
| 1810 | for (k=0; k<ligne.cdata_.size(); k++, ncol++)
|
---|
| 1811 | {
|
---|
[1220] | 1812 | fits_write_col(fptr_,TSTRING,ncol+1,NoLine+1,1,1, (void*)ligne.cdata_[k].c_str() ,&status);
|
---|
[1209] | 1813 | if( status ) printerror( status, "PutBinTabLine : erreur ecriture caracteres" );
|
---|
| 1814 | }
|
---|
[1193] | 1815 | }
|
---|
| 1816 |
|
---|
| 1817 |
|
---|
[1218] | 1818 | /* \fn void SOPHYA::FitsOutFile::DVListIntoPrimaryHeader(DVList& dvl) const
|
---|
| 1819 |
|
---|
| 1820 | Put keywords from a DVList into the primary header of the fits-file
|
---|
| 1821 | */
|
---|
[1246] | 1822 | void FitsOutFile::DVListIntoPrimaryHeader(DVList& dvl)
|
---|
[1143] | 1823 | {
|
---|
| 1824 | int status = 0;
|
---|
| 1825 | int hdutype;
|
---|
[1246] | 1826 | if (hdunum_ == 0)
|
---|
| 1827 | {
|
---|
| 1828 | if (dvlToPrimary_ == NULL) dvlToPrimary_ = new DVList(dvl);
|
---|
| 1829 | else dvlToPrimary_->Merge(dvl);
|
---|
| 1830 | }
|
---|
| 1831 | else
|
---|
| 1832 | {
|
---|
| 1833 | fits_movabs_hdu(fptr_,1,&hdutype,&status);
|
---|
| 1834 | addKeywordsOfDVList(dvl);
|
---|
| 1835 | fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
|
---|
| 1836 | }
|
---|
[1143] | 1837 | }
|
---|
[839] | 1838 |
|
---|
[1143] | 1839 |
|
---|
[1246] | 1840 | void FitsOutFile::writeSignatureOnFits(int hdunum) const
|
---|
[839] | 1841 | {
|
---|
| 1842 | int status = 0;
|
---|
[1246] | 1843 | int hdutype;
|
---|
[839] | 1844 | char keyname[LEN_KEYWORD];
|
---|
| 1845 | char strval[FLEN_VALUE];
|
---|
| 1846 | char comment[FLEN_COMMENT];
|
---|
[1246] | 1847 | if (hdunum_ == 0)
|
---|
| 1848 | {
|
---|
| 1849 | cerr << " WARNING : can't write keywords on non existing primary header" << endl;
|
---|
| 1850 | return;
|
---|
| 1851 | }
|
---|
| 1852 | fits_movabs_hdu(fptr_,1,&hdutype,&status);
|
---|
| 1853 | //
|
---|
[971] | 1854 | strncpy(keyname, "CREATOR", LEN_KEYWORD);
|
---|
[1418] | 1855 | keyname[7] = '\0';
|
---|
[971] | 1856 | strcpy(strval, "SOPHYA");
|
---|
| 1857 | strcpy(comment," SOPHYA Package - FITSIOServer ");
|
---|
| 1858 | fits_write_key(fptr_, TSTRING, keyname, &strval, comment, &status);
|
---|
| 1859 | if( status ) printerror( status );
|
---|
[1143] | 1860 | fits_write_date(fptr_, &status);
|
---|
[971] | 1861 | fits_write_comment(fptr_,"..............................................", &status);
|
---|
| 1862 | fits_write_comment(fptr_, " SOPHYA package - FITSIOSever ", &status);
|
---|
| 1863 | fits_write_comment(fptr_, " (C) LAL/IN2P3-CNRS Orsay, FRANCE 2000", &status);
|
---|
| 1864 | fits_write_comment(fptr_, " (C) DAPNIA/CEA Saclay, FRANCE 2000", &status);
|
---|
| 1865 | fits_write_comment(fptr_,"..............................................", &status);
|
---|
[1045] | 1866 | if( status ) printerror( status, "erreur writeSignatureOnFits" );
|
---|
[1246] | 1867 | //
|
---|
| 1868 | fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
|
---|
[839] | 1869 | }
|
---|
| 1870 |
|
---|
[903] | 1871 |
|
---|
[1246] | 1872 | void FitsOutFile::addKeywordsOfDVList( DVList& dvl) const
|
---|
[1143] | 1873 | {
|
---|
| 1874 | int status = 0;
|
---|
| 1875 | fits_write_comment(fptr_,"---------- keywords from SOPHYA ---------", &status);
|
---|
| 1876 | DVList::ValList::const_iterator it;
|
---|
| 1877 | for(it = dvl.Begin(); it != dvl.End(); it++)
|
---|
| 1878 | {
|
---|
[1311] | 1879 | MuTyV::MTVType keytype= (*it).second.elval.Type();
|
---|
[1418] | 1880 | char keyname[LEN_KEYWORD];
|
---|
| 1881 | strncpy(keyname,(*it).first.substr(0,64).c_str(),LEN_KEYWORD);
|
---|
| 1882 | int bout = ((*it).first.substr(0,64).length() < LEN_KEYWORD) ? (*it).first.substr(0,64).length() : LEN_KEYWORD-1;
|
---|
| 1883 | keyname[bout] = '\0';
|
---|
| 1884 | string key((*it).first.substr(0,64));
|
---|
| 1885 | // string key(keyname);
|
---|
[1143] | 1886 | char comment[FLEN_COMMENT];
|
---|
| 1887 | char strval[FLEN_VALUE]= "";
|
---|
| 1888 | char *comkey = "COMMENT";
|
---|
[1353] | 1889 | // fits_read_keyword(fptr_, keyname, strval, NULL, &status);
|
---|
| 1890 | // if (status != 0 || strncmp(keyname,comkey,LEN_KEYWORD-1) == 0 )
|
---|
[1143] | 1891 | {
|
---|
[1183] | 1892 | string coco = dvl.GetComment(key);
|
---|
| 1893 | coco.copy( comment, FLEN_COMMENT-1);
|
---|
| 1894 | int bout = (coco.length() < FLEN_COMMENT) ? coco.length() : FLEN_COMMENT-1;
|
---|
| 1895 | comment[bout]= '\0';
|
---|
[1143] | 1896 | status = 0;
|
---|
| 1897 | switch (keytype)
|
---|
| 1898 | {
|
---|
[1311] | 1899 | case MuTyV::MTVInteger :
|
---|
[1143] | 1900 | {
|
---|
[1183] | 1901 | int ival = (int)dvl.GetI(key);
|
---|
| 1902 | fits_write_key(fptr_,TINT,keyname,&ival, comment,&status);
|
---|
[1143] | 1903 | break;
|
---|
| 1904 | }
|
---|
[1311] | 1905 | case MuTyV::MTVFloat :
|
---|
[1143] | 1906 | {
|
---|
[1183] | 1907 | double dval= (double)dvl.GetD(key);
|
---|
[1143] | 1908 | fits_write_key(fptr_,TDOUBLE,keyname,&dval,comment,&status);
|
---|
| 1909 | break;
|
---|
| 1910 | }
|
---|
[1311] | 1911 | case MuTyV::MTVString :
|
---|
[1143] | 1912 | {
|
---|
[1183] | 1913 | char strvaleur[FLEN_VALUE]= "";
|
---|
| 1914 | string valChaine = dvl.GetS(key);
|
---|
| 1915 | valChaine.copy(strvaleur, FLEN_VALUE-1);
|
---|
| 1916 | int fin = (valChaine.length() < FLEN_VALUE) ? valChaine.length() : FLEN_VALUE-1;
|
---|
| 1917 | strvaleur[fin]= '\0';
|
---|
| 1918 |
|
---|
| 1919 | fits_write_key(fptr_,TSTRING,keyname,&strvaleur,comment,&status);
|
---|
[1143] | 1920 | break;
|
---|
| 1921 | }
|
---|
| 1922 | }
|
---|
| 1923 | }
|
---|
| 1924 | if( status ) printerror( status,"fitsfile: probleme ecriture mot-cle du dvlist" );
|
---|
| 1925 | }
|
---|
| 1926 | fits_write_comment(fptr_,"--------------------------------------", &status);
|
---|
| 1927 | }
|
---|
[903] | 1928 |
|
---|
| 1929 |
|
---|
[1246] | 1930 | void FitsOutFile::addDVListOnPrimary()
|
---|
| 1931 | {
|
---|
| 1932 | int status = 0;
|
---|
| 1933 | int hdutype;
|
---|
| 1934 | if (hdunum_ == 0)
|
---|
| 1935 | {
|
---|
| 1936 | cerr << " WARNING : can't write keywords on non existing primary header" << endl;
|
---|
| 1937 | return;
|
---|
| 1938 | }
|
---|
| 1939 | if (dvlToPrimary_ != NULL)
|
---|
| 1940 | {
|
---|
| 1941 | fits_movabs_hdu(fptr_,1,&hdutype,&status);
|
---|
| 1942 | addKeywordsOfDVList(*dvlToPrimary_);
|
---|
| 1943 | delete dvlToPrimary_;
|
---|
| 1944 | dvlToPrimary_ = NULL;
|
---|
| 1945 | fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
|
---|
| 1946 | }
|
---|
| 1947 | }
|
---|
[839] | 1948 |
|
---|
[1353] | 1949 |
|
---|
| 1950 | /*! \fn void FitsOutFile::appendInHeader(FitsInFile& infits, int hdunum)
|
---|
| 1951 |
|
---|
| 1952 | get a header from FitsInFile and append to the header beeing built
|
---|
| 1953 | (shifting mandatory keywords)
|
---|
| 1954 | */
|
---|
| 1955 |
|
---|
| 1956 | void FitsOutFile::appendInputHeader(FitsInFile& infits, int hdunum)
|
---|
| 1957 | {
|
---|
[1771] | 1958 |
|
---|
| 1959 | infits.GetKeywordsFromHeader(hdunum, mots_cles_);
|
---|
| 1960 | /*
|
---|
[1353] | 1961 | int status = 0;
|
---|
| 1962 | int hdutype;
|
---|
| 1963 | fitsfile* fptr=infits.fitsfilePtr();
|
---|
| 1964 | fits_movabs_hdu(fptr,hdunum,&hdutype,&status);
|
---|
| 1965 | if( status ) fits_report_error(stderr,status);
|
---|
| 1966 |
|
---|
| 1967 | // get number of keywords
|
---|
| 1968 | int nkeys,keypos;
|
---|
| 1969 | fits_get_hdrpos(fptr,&nkeys,&keypos,&status);
|
---|
| 1970 | if( status ) fits_report_error(stderr,status);
|
---|
| 1971 | // shift with the number of mandatory keywords
|
---|
| 1972 | int num= 0;
|
---|
| 1973 | // if primary header
|
---|
| 1974 | if (hdunum == 1)
|
---|
| 1975 | {
|
---|
| 1976 | // read NAXIS
|
---|
| 1977 | int naxis=0;
|
---|
| 1978 | fits_read_key(fptr,TINT,"NAXIS",&naxis,NULL,&status);
|
---|
| 1979 | // number of mandatory keywords
|
---|
| 1980 | num = naxis+3;
|
---|
| 1981 | }
|
---|
| 1982 | // extensions
|
---|
| 1983 | else
|
---|
| 1984 | {
|
---|
| 1985 | if (hdutype == IMAGE_HDU)
|
---|
| 1986 | {
|
---|
| 1987 | // read NAXIS
|
---|
| 1988 | int naxis=0;
|
---|
| 1989 | fits_read_key(fptr,TINT,"NAXIS",&naxis,NULL,&status);
|
---|
| 1990 | // number of mandatory keywords
|
---|
| 1991 | num = naxis+5;
|
---|
| 1992 | }
|
---|
| 1993 | else
|
---|
| 1994 | if(hdutype == ASCII_TBL || hdutype == BINARY_TBL)
|
---|
| 1995 | {
|
---|
| 1996 | // number of mandatory keywords
|
---|
| 1997 | num = 8;
|
---|
| 1998 | }
|
---|
| 1999 | }
|
---|
| 2000 | int j;
|
---|
| 2001 | char keyname[LEN_KEYWORD];
|
---|
| 2002 | char value[FLEN_VALUE];
|
---|
| 2003 | char comment[FLEN_COMMENT];
|
---|
| 2004 | for(j = num+1; j <= nkeys; j++)
|
---|
| 2005 | {
|
---|
| 2006 | char dtype;
|
---|
| 2007 | fits_read_keyn(fptr,j,keyname,value,comment,&status);
|
---|
| 2008 | if(status)
|
---|
| 2009 | {
|
---|
| 2010 | fits_report_error(stderr,status);
|
---|
| 2011 | status=0;
|
---|
| 2012 | }
|
---|
| 2013 | string kn(keyname);
|
---|
| 2014 | string cm(comment);
|
---|
| 2015 | string val(value);
|
---|
| 2016 | FitsKeyword kw(kn, val, cm);
|
---|
| 2017 | mots_cles_.push_back(kw);
|
---|
| 2018 | }
|
---|
[1771] | 2019 | */
|
---|
[1353] | 2020 | }
|
---|
| 2021 | void FitsOutFile::writeAppendedHeaderOnFits()
|
---|
| 2022 | {
|
---|
| 2023 | for (list<FitsKeyword>::iterator it=mots_cles_.begin(); it !=mots_cles_.end(); it++)
|
---|
| 2024 | {
|
---|
| 2025 | (*it).writeOnFits(fptr_);
|
---|
| 2026 | }
|
---|
| 2027 | mots_cles_.clear();
|
---|
| 2028 | }
|
---|
| 2029 |
|
---|
| 2030 | void FitsOutFile::insertKeywordOnHeader(string keyname, double value, string comment)
|
---|
| 2031 | {
|
---|
[1418] | 2032 | char cvalue[16];
|
---|
[1353] | 2033 | sprintf(cvalue,"%e",value);
|
---|
[1418] | 2034 | FitsKeyword kw(keyname, string(cvalue), comment, 'F');
|
---|
[1353] | 2035 | mots_cles_.push_back(kw);
|
---|
| 2036 | }
|
---|
[1418] | 2037 | void FitsOutFile::insertKeywordOnHeader(string keyname, int value, string comment)
|
---|
| 2038 | {
|
---|
| 2039 | char cvalue[16];
|
---|
| 2040 | sprintf(cvalue,"%d",value);
|
---|
| 2041 | FitsKeyword kw(keyname, string(cvalue), comment, 'I');
|
---|
| 2042 | mots_cles_.push_back(kw);
|
---|
| 2043 | }
|
---|
| 2044 | void FitsOutFile::insertKeywordOnHeader(string keyname, string value, string comment)
|
---|
| 2045 | {
|
---|
| 2046 | FitsKeyword kw(keyname, value , comment, 'C');
|
---|
| 2047 | mots_cles_.push_back(kw);
|
---|
| 2048 | }
|
---|
[1353] | 2049 |
|
---|
| 2050 | void FitsOutFile::insertCommentLineOnHeader(string comment)
|
---|
| 2051 | {
|
---|
| 2052 | FitsKeyword kw(comment);
|
---|
| 2053 | mots_cles_.push_back(kw);
|
---|
| 2054 | }
|
---|
| 2055 |
|
---|
| 2056 | void FitsOutFile::PrintHeaderToBeAppended()
|
---|
| 2057 | {
|
---|
| 2058 | cout << " contenu du header en cours de fabrication " << endl;
|
---|
| 2059 | for (list<FitsKeyword>::iterator it=mots_cles_.begin(); it !=mots_cles_.end(); it++)
|
---|
| 2060 | {
|
---|
| 2061 | (*it).Print();
|
---|
| 2062 | }
|
---|
| 2063 | }
|
---|
| 2064 |
|
---|
| 2065 |
|
---|
| 2066 | FitsKeyword::FitsKeyword()
|
---|
| 2067 | {
|
---|
| 2068 | datatype_=' ';
|
---|
| 2069 | keyname_ = string("");
|
---|
| 2070 | dvalue_=0.;
|
---|
| 2071 | ivalue_=1;
|
---|
| 2072 | svalue_=string("");
|
---|
| 2073 | comment_=string("");
|
---|
| 2074 | }
|
---|
| 2075 |
|
---|
| 2076 | FitsKeyword::FitsKeyword(string comment)
|
---|
| 2077 | {
|
---|
| 2078 | datatype_=' ';
|
---|
| 2079 | keyname_=string("COMMENT");
|
---|
| 2080 | comment_=comment;
|
---|
[1418] | 2081 | }
|
---|
[1353] | 2082 |
|
---|
| 2083 | FitsKeyword::FitsKeyword(string keyname, string value, string comment) : keyname_(keyname), comment_(comment)
|
---|
| 2084 | {
|
---|
| 2085 | int status=0;
|
---|
| 2086 | char dtype;
|
---|
| 2087 | const char* val= value.c_str();
|
---|
| 2088 | char* valk = const_cast<char*>(val);
|
---|
| 2089 | fits_get_keytype(valk,&dtype,&status);
|
---|
| 2090 | if(status)
|
---|
| 2091 | {
|
---|
| 2092 | status=0;
|
---|
[1354] | 2093 | if (status == VALUE_UNDEFINED) cout << "WARNING (FitsKeyword) : undefined keyword value " << endl;
|
---|
[1353] | 2094 | datatype_=' ';
|
---|
| 2095 | }
|
---|
| 2096 | else datatype_=dtype;
|
---|
| 2097 |
|
---|
| 2098 | switch( datatype_ )
|
---|
| 2099 | {
|
---|
| 2100 | case 'C':
|
---|
| 2101 | {
|
---|
[1354] | 2102 | strip(valk, 'B','\'');
|
---|
| 2103 | svalue_ = string(valk);
|
---|
[1353] | 2104 | break;
|
---|
| 2105 | }
|
---|
| 2106 | case 'I':
|
---|
| 2107 | {
|
---|
| 2108 | ivalue_ = atoi(val);
|
---|
| 2109 | break;
|
---|
| 2110 | }
|
---|
| 2111 | case 'L':
|
---|
| 2112 | {
|
---|
[1354] | 2113 | bool bb = value.c_str();
|
---|
| 2114 | ivalue_ = (int)bb;
|
---|
[1353] | 2115 | break;
|
---|
| 2116 | }
|
---|
| 2117 | case 'F':
|
---|
| 2118 | {
|
---|
| 2119 | dvalue_ = atof(val);
|
---|
| 2120 | break;
|
---|
| 2121 | }
|
---|
| 2122 | case 'X':
|
---|
| 2123 | {
|
---|
| 2124 | throw IOExc("FitsKeyword , complex keyword value not supported");
|
---|
| 2125 | }
|
---|
| 2126 | }
|
---|
| 2127 | }
|
---|
| 2128 |
|
---|
[1418] | 2129 | // constructeur pour les mots-cles maison (ne prvenant pas de la lecture d'un fichier fits)
|
---|
| 2130 | FitsKeyword::FitsKeyword(string keyname, string value, string comment, char type) : keyname_(keyname), comment_(comment), datatype_(type)
|
---|
| 2131 | {
|
---|
| 2132 | char dtype;
|
---|
| 2133 | const char* val= value.c_str();
|
---|
| 2134 | char* valk = const_cast<char*>(val);
|
---|
| 2135 | switch( datatype_ )
|
---|
| 2136 | {
|
---|
| 2137 | case 'C':
|
---|
| 2138 | {
|
---|
| 2139 | strip(valk, 'B','\'');
|
---|
| 2140 | svalue_ = string(valk);
|
---|
| 2141 | break;
|
---|
| 2142 | }
|
---|
| 2143 | case 'I':
|
---|
| 2144 | {
|
---|
| 2145 | ivalue_ = atoi(val);
|
---|
| 2146 | break;
|
---|
| 2147 | }
|
---|
| 2148 | case 'L':
|
---|
| 2149 | {
|
---|
| 2150 | bool bb = value.c_str();
|
---|
| 2151 | ivalue_ = (int)bb;
|
---|
| 2152 | break;
|
---|
| 2153 | }
|
---|
| 2154 | case 'F':
|
---|
| 2155 | {
|
---|
| 2156 | dvalue_ = atof(val);
|
---|
| 2157 | break;
|
---|
| 2158 | }
|
---|
| 2159 | case 'X':
|
---|
| 2160 | {
|
---|
| 2161 | throw IOExc("FitsKeyword , complex keyword value not supported");
|
---|
| 2162 | }
|
---|
| 2163 | }
|
---|
| 2164 | }
|
---|
| 2165 |
|
---|
[1353] | 2166 | void FitsKeyword::writeOnFits(fitsfile* ptr)
|
---|
| 2167 | {
|
---|
| 2168 | int status=0;
|
---|
[1418] | 2169 | char keyname[LEN_KEYWORD];
|
---|
| 2170 | char comment[FLEN_COMMENT];
|
---|
| 2171 | keyname_.copy(keyname, LEN_KEYWORD);
|
---|
| 2172 | int bout = (keyname_.length() < LEN_KEYWORD) ? keyname_.length() : LEN_KEYWORD-1;
|
---|
| 2173 | keyname[bout] = '\0';
|
---|
| 2174 | comment_.copy( comment, FLEN_COMMENT);
|
---|
| 2175 | bout = (comment_.length() < FLEN_COMMENT) ? comment_.length() : FLEN_COMMENT-1;
|
---|
| 2176 | comment[bout]= '\0';
|
---|
| 2177 |
|
---|
[1353] | 2178 | int nkeys,keypos;
|
---|
| 2179 | fits_get_hdrpos(ptr,&nkeys,&keypos,&status);
|
---|
| 2180 | switch( datatype_ )
|
---|
| 2181 | {
|
---|
| 2182 | case 'C':
|
---|
| 2183 | {
|
---|
[1418] | 2184 | char value[FLEN_VALUE]="";
|
---|
| 2185 | svalue_.copy(value, FLEN_VALUE-1);
|
---|
| 2186 | int fin = (svalue_.length() < FLEN_VALUE) ? svalue_.length() : FLEN_VALUE-1;
|
---|
| 2187 | value[fin]= '\0';
|
---|
[1353] | 2188 | fits_write_key(ptr,TSTRING,keyname,&value, comment,&status);
|
---|
| 2189 | fits_report_error(stderr,status);
|
---|
| 2190 | break;
|
---|
| 2191 | }
|
---|
| 2192 | case 'I':
|
---|
| 2193 | {
|
---|
| 2194 | fits_write_key(ptr,TINT,keyname,&ivalue_, comment,&status);
|
---|
| 2195 | fits_report_error(stderr,status);
|
---|
| 2196 | break;
|
---|
| 2197 | }
|
---|
| 2198 | case 'L':
|
---|
| 2199 | {
|
---|
| 2200 | fits_write_key(ptr,TLOGICAL,keyname,&ivalue_, comment,&status);
|
---|
| 2201 | fits_report_error(stderr,status);
|
---|
| 2202 | break;
|
---|
| 2203 | }
|
---|
| 2204 | case 'F':
|
---|
| 2205 | {
|
---|
| 2206 | fits_write_key(ptr,TDOUBLE,keyname,&dvalue_, comment,&status);
|
---|
| 2207 | fits_report_error(stderr,status);
|
---|
| 2208 | break;
|
---|
| 2209 | }
|
---|
| 2210 | case 'X':
|
---|
| 2211 | {
|
---|
| 2212 | cout << "FitsKeyword : complex keyword value not supported" << endl;;
|
---|
| 2213 | }
|
---|
| 2214 | default :
|
---|
| 2215 | {
|
---|
| 2216 | char *comkey = "COMMENT";
|
---|
| 2217 | if(strncmp(keyname,comkey,LEN_KEYWORD-1) == 0)
|
---|
| 2218 | {
|
---|
| 2219 | fits_write_comment(ptr,comment,&status);
|
---|
| 2220 | fits_report_error(stderr,status);
|
---|
| 2221 | }
|
---|
| 2222 | else
|
---|
| 2223 | {
|
---|
| 2224 | cout << " WARNING (FitsKeyword::writeOnFits) : unrecognized keyword : " << keyname_ << endl;
|
---|
| 2225 | }
|
---|
| 2226 | }
|
---|
| 2227 | }
|
---|
| 2228 | }
|
---|
| 2229 |
|
---|
| 2230 | void FitsKeyword::Print()
|
---|
| 2231 | {
|
---|
| 2232 | switch( datatype_ )
|
---|
| 2233 | {
|
---|
| 2234 | case 'C':
|
---|
| 2235 | {
|
---|
| 2236 | cout << " mot cle : " << keyname_ << " valeur : " << svalue_ << " commentaire : " << comment_ <<endl;
|
---|
| 2237 | break;
|
---|
| 2238 | }
|
---|
| 2239 | case 'I':
|
---|
| 2240 | {
|
---|
| 2241 | cout << " mot cle : " << keyname_ << " valeur : " << ivalue_ << " commentaire : " << comment_ <<endl;
|
---|
| 2242 | break;
|
---|
| 2243 | }
|
---|
| 2244 | case 'L':
|
---|
| 2245 | {
|
---|
| 2246 | cout << " mot cle : " << keyname_ << " valeur : " << ivalue_ << " commentaire : " << comment_ <<endl;
|
---|
| 2247 | break;
|
---|
| 2248 | }
|
---|
| 2249 | case 'F':
|
---|
| 2250 | {
|
---|
| 2251 | cout << " mot cle : " << keyname_ << " valeur : " << dvalue_ << " commentaire : " << comment_ <<endl;
|
---|
| 2252 | break;
|
---|
| 2253 | }
|
---|
| 2254 | case 'X':
|
---|
| 2255 | {
|
---|
| 2256 | cout << "FitsKeyword : complex keyword value not supported" << endl;;
|
---|
| 2257 | }
|
---|
| 2258 | default :
|
---|
| 2259 | {
|
---|
| 2260 | cout << " mot cle : " << keyname_ << " commentaire : " << comment_ <<endl;
|
---|
| 2261 | }
|
---|
| 2262 | }
|
---|
| 2263 | }
|
---|