| [2615] | 1 | #include "sopnamsp.h" | 
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| [949] | 2 | #include "machdefs.h" | 
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|  | 3 | #include <stdlib.h> | 
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| [839] | 4 | #include "fitsfile.h" | 
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|  | 5 | #include "pexceptions.h" | 
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|  | 6 | #include "strutil.h" | 
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| [903] | 7 | #include "anydataobj.h" | 
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| [1136] | 8 |  | 
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| [1371] | 9 | /*! | 
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|  | 10 | \defgroup FitsIOServer FitsIOServer  module | 
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|  | 11 | This module contains classes which handle FITS format I/O for | 
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|  | 12 | SOPHYA objects. This module uses cfitsio library. | 
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|  | 13 | */ | 
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| [1136] | 14 |  | 
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| [1359] | 15 | void BnTblLine::setFormat(int dc, int fc, int ic,  int lc, int bc,int cc, vector<string> names) | 
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| [1218] | 16 | { | 
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| [1359] | 17 | int nbcols = dc + fc + ic + cc + lc + bc; | 
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| [1218] | 18 | int maxName = names.size(); | 
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|  | 19 | if (nbcols != maxName) | 
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|  | 20 | { | 
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|  | 21 | cout << " WARNING: BnTblLine:: length of vector of column names not equal to total number of columns" << endl; | 
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|  | 22 | maxName = nbcols < maxName ? nbcols : maxName; | 
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|  | 23 | } | 
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|  | 24 | ColName_ = vector<string>(nbcols); | 
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| [2209] | 25 | int k; | 
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|  | 26 | for (k=0; k < maxName; k++) ColName_[k] = names[k]; | 
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| [1218] | 27 | if (dc >0) ddata_ = vector<double>(dc); | 
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|  | 28 | if (fc >0) fdata_ = vector<float>(fc); | 
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| [2197] | 29 | if (ic >0) idata_ = vector<int>(ic); | 
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| [1359] | 30 | if (lc >0) ldata_ = vector<long>(lc); | 
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|  | 31 | if (bc >0) bdata_ = vector<unsigned char>(bc); | 
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| [2197] | 32 | if (cc >0) cdata_ = vector<string>(cc); | 
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| [1218] | 33 | } | 
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|  | 34 |  | 
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|  | 35 | bool BnTblLine::sameFormat(const BnTblLine& btl) const | 
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|  | 36 | { | 
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| [1359] | 37 | if (btl.ddata_.size() == ddata_.size() && btl.fdata_.size() == fdata_.size() && btl.idata_.size() == idata_.size() && btl.cdata_.size() == cdata_.size() &&  btl.ldata_.size() == ldata_.size() &&  btl.bdata_.size() == bdata_.size()) return true; | 
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| [1218] | 38 | else return false; | 
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|  | 39 | } | 
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|  | 40 |  | 
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|  | 41 | void BnTblLine::Print() | 
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|  | 42 | { | 
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|  | 43 | int k; | 
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|  | 44 | cout << " ********* ligne ************* " << endl; | 
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|  | 45 | cout << " *** noms de variables  " << endl; | 
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|  | 46 | for (k=0; k < ColName_.size(); k++) cout << ColName_[k] << " "; | 
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|  | 47 | cout << endl; | 
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|  | 48 | cout << " *** variables doubles  " << endl; | 
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|  | 49 | for (k=0; k < ddata_.size(); k++) cout << ddata_[k] << " "; | 
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|  | 50 | cout << endl; | 
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|  | 51 | cout << " *** variables float  " << endl; | 
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|  | 52 | for (k=0; k < fdata_.size(); k++) cout << fdata_[k] << " "; | 
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|  | 53 | cout << endl; | 
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|  | 54 | cout << " *** variables int  " << endl; | 
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|  | 55 | for (k=0; k < idata_.size(); k++) cout << idata_[k] << " "; | 
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|  | 56 | cout << endl; | 
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|  | 57 | cout << " *** variables string  " << endl; | 
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|  | 58 | for (k=0; k < cdata_.size(); k++) cout << cdata_[k] << " "; | 
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|  | 59 | cout << endl; | 
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| [1359] | 60 | cout << " *** variables long  " << endl; | 
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|  | 61 | for (k=0; k < ldata_.size(); k++) cout << ldata_[k] << " "; | 
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|  | 62 | cout << endl; | 
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|  | 63 | cout << " *** variables byte  " << endl; | 
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|  | 64 | for (k=0; k < bdata_.size(); k++) cout << (int)bdata_[k] << " "; | 
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|  | 65 | cout << endl; | 
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| [1218] | 66 | cout << " ***************************** " << endl; | 
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|  | 67 | } | 
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|  | 68 |  | 
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| [2197] | 69 | FitsFile::BufferLine::BufferLine(const vector<FitsFile::FitsDataType>& types) | 
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|  | 70 | { | 
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| [1218] | 71 |  | 
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|  | 72 |  | 
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| [2197] | 73 | int dc=0; | 
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|  | 74 | int fc=0; | 
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|  | 75 | int shc=0; | 
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|  | 76 | int ic=0; | 
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|  | 77 | int lc=0; | 
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|  | 78 | int cc=0; | 
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|  | 79 | int bc=0; | 
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|  | 80 | id_  = vector< pair<FitsFile::FitsDataType, int> >(types.size()); | 
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| [2209] | 81 | int k; | 
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|  | 82 | for (k= 0; k < types.size(); k++) | 
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| [2197] | 83 | { | 
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|  | 84 | switch( types[k] ) | 
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|  | 85 | { | 
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|  | 86 | case FitsFile::FitsDataType_double : | 
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|  | 87 | { | 
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|  | 88 | id_[k] = pair<FitsFile::FitsDataType, int>(FitsFile::FitsDataType_double, dc); | 
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|  | 89 | dc++; | 
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|  | 90 | break; | 
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|  | 91 | } | 
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|  | 92 | case FitsFile::FitsDataType_float : | 
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|  | 93 | { | 
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|  | 94 | id_[k] = pair<FitsFile::FitsDataType, int>(FitsFile::FitsDataType_float, fc); | 
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|  | 95 | fc++; | 
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|  | 96 | break; | 
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|  | 97 | } | 
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|  | 98 | case  FitsFile::FitsDataType_short : | 
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|  | 99 | { | 
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|  | 100 | id_[k] = pair<FitsFile::FitsDataType, int>(FitsDataType_short, shc); | 
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|  | 101 | shc++; | 
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|  | 102 | break; | 
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|  | 103 | } | 
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|  | 104 | case  FitsFile::FitsDataType_int : | 
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|  | 105 | { | 
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|  | 106 | id_[k] = pair<FitsFile::FitsDataType, int>(FitsDataType_int, ic); | 
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|  | 107 | ic++; | 
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|  | 108 | break; | 
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|  | 109 | } | 
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|  | 110 | case  FitsFile::FitsDataType_long : | 
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|  | 111 | { | 
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|  | 112 | id_[k] = pair<FitsFile::FitsDataType, int>(FitsFile::FitsDataType_long, lc); | 
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|  | 113 | lc++; | 
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|  | 114 | break; | 
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|  | 115 | } | 
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|  | 116 | case  FitsFile::FitsDataType_byte : | 
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|  | 117 | { | 
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|  | 118 | id_[k] = pair<FitsFile::FitsDataType, int>(FitsFile::FitsDataType_byte, bc); | 
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|  | 119 | bc++; | 
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|  | 120 | break; | 
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|  | 121 | } | 
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|  | 122 | case FitsDataType_char : | 
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|  | 123 | { | 
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|  | 124 | id_[k] = pair<FitsFile::FitsDataType, int>(FitsFile::FitsDataType_char, cc); | 
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|  | 125 | cc++; | 
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|  | 126 | break; | 
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|  | 127 | } | 
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|  | 128 | default: | 
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|  | 129 | { | 
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|  | 130 | throw PException(" FitsFile::getHeaderWithSophyaObject() : unsupported FITS data type"); | 
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|  | 131 | } | 
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|  | 132 | } | 
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|  | 133 | } | 
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|  | 134 |  | 
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|  | 135 | if (dc >0) ddata_ = vector<r_8>(dc); | 
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|  | 136 | if (fc >0) fdata_ = vector<r_4>(fc); | 
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|  | 137 | if (shc >0) shdata_ = vector<int_2>(shc); | 
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|  | 138 | if (ic >0) idata_ = vector<int_4>(ic); | 
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|  | 139 | if (lc >0) ldata_ = vector<int_8>(lc); | 
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|  | 140 | if (cc >0) cdata_ = vector<string>(cc); | 
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|  | 141 | if (bc >0) bdata_ = vector<unsigned char>(bc); | 
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|  | 142 | } | 
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|  | 143 |  | 
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|  | 144 |  | 
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|  | 145 | void FitsFile::BufferLine::Print() const | 
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|  | 146 | { | 
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|  | 147 | cout << " impression de la ligne: " << endl; | 
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|  | 148 |  | 
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|  | 149 | cout << " doubles : " << endl; | 
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| [2209] | 150 | int k; | 
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|  | 151 | for (k=0; k< ddata_.size(); k++) | 
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| [2197] | 152 | { | 
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|  | 153 | cout << ddata_[k] << " " ; | 
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|  | 154 | } | 
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|  | 155 | cout << endl; | 
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|  | 156 |  | 
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|  | 157 | cout << " floats : " << endl; | 
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| [2209] | 158 | for (k=0; k< fdata_.size(); k++) | 
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| [2197] | 159 | { | 
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|  | 160 | cout << fdata_[k] << " " ; | 
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|  | 161 | } | 
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|  | 162 | cout << endl; | 
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|  | 163 |  | 
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|  | 164 | cout << " entiers courts: " << endl; | 
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| [2209] | 165 | for (k=0; k< shdata_.size(); k++) | 
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| [2197] | 166 | { | 
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|  | 167 | cout << shdata_[k] << " " ; | 
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|  | 168 | } | 
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|  | 169 | cout << endl; | 
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|  | 170 | cout << " entiers : " << endl; | 
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| [2209] | 171 | for (k=0; k< idata_.size(); k++) | 
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| [2197] | 172 | { | 
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|  | 173 | cout << idata_[k] << " " ; | 
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|  | 174 | } | 
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|  | 175 | cout << endl; | 
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|  | 176 |  | 
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|  | 177 | cout << " entiers longs : " << endl; | 
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| [2209] | 178 | for (k=0; k< ldata_.size(); k++) | 
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| [2197] | 179 | { | 
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|  | 180 | cout << ldata_[k] << " " ; | 
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|  | 181 | } | 
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|  | 182 | cout << endl; | 
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|  | 183 |  | 
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|  | 184 | cout << " chaines carac.  : " << endl; | 
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| [2209] | 185 | for (k=0; k< cdata_.size(); k++) | 
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| [2197] | 186 | { | 
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|  | 187 | cout << cdata_[k] << " " ; | 
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|  | 188 | } | 
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|  | 189 | cout << endl; | 
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|  | 190 |  | 
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|  | 191 | cout << " bytes : " << endl; | 
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| [2209] | 192 | for (k=0; k< bdata_.size(); k++) | 
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| [2197] | 193 | { | 
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|  | 194 | cout << (char)bdata_[k] << " " ; | 
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|  | 195 | } | 
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|  | 196 | cout << endl; | 
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|  | 197 |  | 
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|  | 198 |  | 
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|  | 199 | } | 
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|  | 200 |  | 
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| [1218] | 201 | /*! | 
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|  | 202 | \class SOPHYA::FitsIOHandler | 
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| [1371] | 203 | \ingroup FitsIOServer | 
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| [1218] | 204 | The class structure is analogous to Sophya-PPersist system : | 
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|  | 205 | Each SOPHYA object XXX is associated with a object of class FITS_XXX | 
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|  | 206 | (inheriting from FitsFileHandler), to which input/output operations with FITS | 
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|  | 207 | files are delegated (through a class Hierarchy : FitsFile (virtual), | 
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|  | 208 | FitsInFile, FitsOutFile) . A typical example of use is the following : | 
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|  | 209 |  | 
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|  | 210 | \verbatim | 
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|  | 211 | int m=... ; | 
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|  | 212 | SphereHEALPix<r_8> sphere1(m);           // definition of the SOPHYA object | 
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|  | 213 | .... fill the sphere .... | 
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|  | 214 |  | 
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|  | 215 | FITS_SphereHEALPix<r_8> fits_sph1(sphere1); | 
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|  | 216 | // delegated object | 
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|  | 217 | fits_sph.Write("myfile.fits");           // writing on FITS file | 
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|  | 218 |  | 
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|  | 219 | FITS_SphereHEALPix<r_8> fits_sph2("myfile.fits"); | 
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|  | 220 | // load a delegated object | 
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|  | 221 | // from FITS file | 
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|  | 222 | SphereHEALPix<r_8> sphere2=(SphereHEALPix<r_8>)fits_sph2; | 
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|  | 223 | // casting the delegated object | 
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|  | 224 | // into a SOPHYA object | 
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|  | 225 | \endverbatim | 
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|  | 226 |  | 
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|  | 227 |  | 
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|  | 228 | */ | 
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|  | 229 |  | 
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|  | 230 | /*! \fn void  SOPHYA::FitsIOHandler::Read(char flnm[],int hdunum) | 
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|  | 231 |  | 
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|  | 232 | this method is called from inherited objects : | 
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|  | 233 |  | 
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|  | 234 | opens a file 'flnm' | 
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|  | 235 |  | 
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|  | 236 | gets parameters in extension-header (hdunum) | 
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|  | 237 |  | 
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|  | 238 | calls the method 'ReadFromFits' from the inherited  object | 
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|  | 239 | */ | 
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| [1136] | 240 | void   FitsIOHandler::Read(char flnm[],int hdunum) | 
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| [839] | 241 | { | 
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| [1136] | 242 | FitsInFile ifts(flnm); | 
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|  | 243 | Read(ifts, hdunum); | 
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| [839] | 244 | } | 
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| [1218] | 245 |  | 
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| [2897] | 246 | void FitsIOHandler::Read(FitsInOutFile& is) | 
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|  | 247 | { | 
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|  | 248 | FitsInFile fis(is); | 
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| [2898] | 249 | fis.ReadHeader(fis.CurrentHDU()); | 
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| [2897] | 250 | ReadFromFits(fis); | 
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|  | 251 | } | 
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|  | 252 |  | 
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| [1218] | 253 | /*! \fn void SOPHYA::FitsIOHandler::Read(FitsInFile& is, int hdunum) | 
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|  | 254 | Read the data on extension hdunum (or primary header, if hdunum=1) from FitsInFIle. If hdunum is not addressed, , one reads the next extension, with respect to the current position. | 
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|  | 255 | */ | 
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| [1136] | 256 | void FitsIOHandler::Read(FitsInFile& is, int hdunum) | 
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|  | 257 | { | 
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| [1300] | 258 | is.ReadHeader(hdunum); | 
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| [1136] | 259 | ReadFromFits(is); | 
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|  | 260 | } | 
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|  | 261 |  | 
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|  | 262 |  | 
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| [1218] | 263 | /*! \fn void SOPHYA::FitsIOHandler::Write(char flnm[]) | 
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|  | 264 | this method is called from inherited objects. | 
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|  | 265 |  | 
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|  | 266 | for writing a new object in a new fits-extension : | 
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|  | 267 |  | 
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| [1234] | 268 | \warning By convention, primary header may contain fits-image data. | 
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|  | 269 | For switching off this convention (i.e. to make sure that all data will be on fits-extensions) use the method : | 
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| [1218] | 270 |  | 
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|  | 271 | firstImageOnPrimaryHeader() (see below) | 
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|  | 272 |  | 
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|  | 273 | calls the method 'WriteToFits' from the inherited  object | 
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|  | 274 |  | 
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|  | 275 | */ | 
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| [1193] | 276 | void FitsIOHandler::Write(char flnm[]) | 
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| [1136] | 277 |  | 
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|  | 278 | { | 
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| [1231] | 279 | FitsOutFile of(flnm, FitsFile::unknown); | 
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| [2897] | 280 | WriteToFits(of); | 
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| [1136] | 281 | } | 
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|  | 282 |  | 
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| [2897] | 283 | void FitsIOHandler::Write(FitsInOutFile& os) | 
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| [1136] | 284 | { | 
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| [2897] | 285 | FitsOutFile fos(os); | 
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|  | 286 | WriteToFits(fos); | 
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| [1136] | 287 | } | 
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|  | 288 |  | 
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|  | 289 |  | 
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| [2860] | 290 | FitsFile::FitsFile() | 
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|  | 291 | : FitsInOutFile() | 
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|  | 292 | { | 
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|  | 293 | InitNull(); | 
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|  | 294 | } | 
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| [1136] | 295 |  | 
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| [2860] | 296 | FitsFile::FitsFile(FitsInOutFile const& fios) | 
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|  | 297 | : FitsInOutFile(fios) | 
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|  | 298 | { | 
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|  | 299 | InitNull(); | 
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| [2907] | 300 | hdunum_ = fios.CurrentHDU(); | 
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| [2860] | 301 | } | 
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|  | 302 |  | 
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|  | 303 |  | 
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|  | 304 | /*RzDel | 
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| [839] | 305 | FitsFile::~FitsFile() | 
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|  | 306 | { | 
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| [2860] | 307 | //  Close fait par le destructeur de FitsInOutFile - Reza , Dec 2005 | 
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|  | 308 | //  int status = 0; | 
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|  | 309 | //  if( fptr_ != NULL) | 
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|  | 310 | //    fits_close_file(fptr_,&status); | 
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|  | 311 | // if( status )  printerror( status ); | 
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| [839] | 312 | } | 
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| [2860] | 313 | */ | 
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| [903] | 314 |  | 
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| [1136] | 315 |  | 
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|  | 316 | void FitsFile::printerror(int &status) | 
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|  | 317 | //*****************************************************/ | 
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|  | 318 | //* Print out cfitsio error messages and exit program */ | 
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|  | 319 | //*****************************************************/ | 
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| [1045] | 320 | { | 
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| [1136] | 321 | if( status ) | 
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|  | 322 | { | 
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|  | 323 | fits_report_error(stderr,status); | 
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|  | 324 | throw IOExc("FitsFile:: error FITSIO status"); | 
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|  | 325 | } | 
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|  | 326 | return; | 
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|  | 327 | } | 
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| [903] | 328 |  | 
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| [1136] | 329 | void FitsFile::printerror(int& status, char* texte) | 
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|  | 330 | //*****************************************************/ | 
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|  | 331 | //* Print out cfitsio error messages and exit program */ | 
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|  | 332 | //*****************************************************/ | 
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|  | 333 | { | 
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|  | 334 | // print out cfitsio error messages and exit program | 
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|  | 335 | // print error report | 
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| [1235] | 336 | fits_report_error(stderr, status); | 
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| [1136] | 337 | cout << " erreur:: " << texte << endl; | 
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|  | 338 | throw IOExc("FitsFile:: error FITSIO status"); | 
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|  | 339 | } | 
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| [1703] | 340 | void FitsFile::printerrorAndContinue(int& status, char* texte) | 
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|  | 341 | //*****************************************************/ | 
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|  | 342 | //* Print out cfitsio error messages and exit program */ | 
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|  | 343 | //*****************************************************/ | 
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|  | 344 | { | 
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|  | 345 | // print out cfitsio error messages and exit program | 
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|  | 346 | // print error report | 
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|  | 347 | fits_report_error(stderr, status); | 
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|  | 348 | cout << " erreur:: " << texte << endl; | 
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|  | 349 | //  throw IOExc("FitsFile:: error FITSIO status"); | 
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|  | 350 | } | 
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| [1136] | 351 |  | 
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|  | 352 | void FitsFile::ResetStatus(int& status) | 
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|  | 353 | { | 
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|  | 354 | fits_status_ = status; | 
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|  | 355 | status = 0; | 
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| [1235] | 356 | fits_clear_errmsg(); | 
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| [1136] | 357 | } | 
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|  | 358 |  | 
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| [1209] | 359 | string FitsFile::GetErrStatus(int status) | 
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| [1136] | 360 | { | 
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|  | 361 | char text[31]; | 
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|  | 362 | fits_get_errstatus(status, text); | 
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|  | 363 | return string(text); | 
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|  | 364 | } | 
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|  | 365 |  | 
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| [1218] | 366 | /*! | 
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|  | 367 | \class SOPHYA::FitsInFile | 
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| [1371] | 368 | \ingroup FitsIOServer | 
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| [1246] | 369 | class for reading  SOPHYA objects from FITS Format Files (uses cfitsio lib) | 
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| [1218] | 370 | */ | 
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|  | 371 |  | 
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| [1136] | 372 | FitsInFile::FitsInFile() | 
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| [2860] | 373 | : FitsFile() | 
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|  | 374 |  | 
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| [1136] | 375 | { | 
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|  | 376 | InitNull(); | 
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|  | 377 | } | 
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| [1218] | 378 |  | 
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| [1231] | 379 | FitsInFile::FitsInFile(string const & flnm) | 
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| [2860] | 380 | : FitsFile() | 
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| [1136] | 381 | { | 
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| [2860] | 382 | InitNull(); | 
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|  | 383 | Open(flnm.c_str(), Fits_RO); | 
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|  | 384 | /*RZDEL | 
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| [1175] | 385 | int status = 0; | 
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| [1231] | 386 | fits_open_file(&fptr_,flnm.c_str(),READONLY,&status); | 
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|  | 387 | if( status ) printerror( status ); | 
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| [2860] | 388 | */ | 
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| [1231] | 389 | } | 
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|  | 390 |  | 
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|  | 391 | FitsInFile::FitsInFile(const char * flnm) | 
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| [2860] | 392 | : FitsFile() | 
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| [1231] | 393 | { | 
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| [2860] | 394 | InitNull(); | 
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|  | 395 | Open(flnm, Fits_RO); | 
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|  | 396 | /*RZDEL | 
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|  | 397 | int status = 0; | 
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| [1175] | 398 | fits_open_file(&fptr_,flnm,READONLY,&status); | 
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|  | 399 | if( status ) printerror( status ); | 
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| [2860] | 400 | */ | 
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| [1136] | 401 | } | 
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|  | 402 |  | 
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| [2860] | 403 | FitsInFile::FitsInFile(FitsInOutFile const& fios) | 
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|  | 404 | : FitsFile(fios) | 
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| [1136] | 405 |  | 
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| [2860] | 406 | { | 
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|  | 407 | InitNull(); | 
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|  | 408 | if (mode_ == Fits_Create) | 
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|  | 409 | throw FitsIOException("FitsInFile::FitsInFile(FitsInOutFile const& fios) newly created fits file"); | 
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|  | 410 | } | 
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|  | 411 |  | 
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|  | 412 |  | 
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| [1136] | 413 | void FitsInFile::InitNull() | 
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|  | 414 | { | 
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| [1300] | 415 | imageDataType_ = FitsDataType_NULL; | 
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| [1045] | 416 | naxis_ = 0; | 
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|  | 417 | nbData_ = 0; | 
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|  | 418 | nrows_ = 0; | 
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|  | 419 | nbcols_ = 0; | 
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|  | 420 | naxisn_.clear(); | 
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|  | 421 | repeat_.clear(); | 
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|  | 422 | noms_.clear(); | 
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|  | 423 | taille_des_chaines_.clear(); | 
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|  | 424 | dvl_.Clear(); | 
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| [1978] | 425 |  | 
|---|
|  | 426 | dnull_ = 1.e-300; | 
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|  | 427 | fnull_ = 1.e-33; | 
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|  | 428 | inull_= 99999; | 
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|  | 429 | cnull_= string("xxx"); | 
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| [1175] | 430 |  | 
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| [1978] | 431 |  | 
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| [1045] | 432 | } | 
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|  | 433 |  | 
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| [1218] | 434 | ////////////////////////////////////////////////////////// | 
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|  | 435 | //     methods with general purpose | 
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|  | 436 | ///////////////////////////////////////////////////////// | 
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| [1045] | 437 |  | 
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| [1136] | 438 | int FitsInFile::NbBlocks(char flnm[]) | 
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| [903] | 439 | { | 
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|  | 440 | int status = 0; | 
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|  | 441 | int nbhdu = 0; | 
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|  | 442 | fitsfile* fileptr; | 
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|  | 443 | fits_open_file(&fileptr,flnm,READONLY,&status); | 
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|  | 444 | if( status ) printerror( status, "NbBlocks: erreur ouverture fichier" ); | 
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|  | 445 | fits_get_num_hdus(fileptr, &nbhdu, &status); | 
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|  | 446 | fits_close_file(fileptr,&status); | 
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|  | 447 | return nbhdu; | 
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|  | 448 | } | 
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| [1334] | 449 | int FitsInFile::NbBlocks() | 
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|  | 450 | { | 
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|  | 451 | int status = 0; | 
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|  | 452 | int nbhdu = 0; | 
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|  | 453 | fits_get_num_hdus(fptr_, &nbhdu, &status); | 
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|  | 454 | return nbhdu; | 
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|  | 455 | } | 
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| [903] | 456 |  | 
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| [1231] | 457 | void FitsInFile::GetBlockType(char flnm[], int hdunum, FitsExtensionType& typeOfExtension, int& naxis, vector<int>& naxisn, FitsDataType& dataType, DVList& dvl ) | 
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| [903] | 458 | { | 
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|  | 459 | int status = 0; | 
|---|
|  | 460 | fitsfile* fileptr; | 
|---|
|  | 461 | fits_open_file(&fileptr,flnm,READONLY,&status); | 
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| [1209] | 462 | if( status ) printerror( status, "GetBlockType: erreur ouverture fichier" ); | 
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| [903] | 463 | // move to the specified HDU number | 
|---|
|  | 464 | int hdutype = 0; | 
|---|
|  | 465 | fits_movabs_hdu(fileptr,hdunum,&hdutype,&status); | 
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| [1209] | 466 | if( status ) printerror( status,"GetBlockType: erreur movabs"); | 
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| [903] | 467 | if(hdutype == IMAGE_HDU) | 
|---|
|  | 468 | { | 
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| [1231] | 469 | typeOfExtension = FitsExtensionType_IMAGE; | 
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| [1300] | 470 | GetImageParameters (fileptr, dataType, naxis, naxisn); | 
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| [903] | 471 | } | 
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|  | 472 | else | 
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|  | 473 | if(hdutype == ASCII_TBL  || hdutype == BINARY_TBL) | 
|---|
|  | 474 | { | 
|---|
|  | 475 | int nrows = 0; | 
|---|
|  | 476 | vector<string> noms; | 
|---|
| [1300] | 477 | vector<FitsDataType> types; | 
|---|
| [903] | 478 | vector<int>  taille_des_chaines; | 
|---|
| [971] | 479 | GetBinTabParameters(fileptr, naxis, nrows, naxisn, noms, types, taille_des_chaines); | 
|---|
|  | 480 | int k; | 
|---|
|  | 481 | for (k=0; k< naxisn.size(); k++) naxisn[k] *= nrows; | 
|---|
| [903] | 482 | if(hdutype == ASCII_TBL) | 
|---|
|  | 483 | { | 
|---|
| [1231] | 484 | typeOfExtension = FitsExtensionType_ASCII_TBL; | 
|---|
|  | 485 | dataType = FitsDataType_ASCII; | 
|---|
| [903] | 486 | } | 
|---|
|  | 487 | else | 
|---|
|  | 488 | { | 
|---|
| [1231] | 489 | typeOfExtension = FitsExtensionType_BINARY_TBL; | 
|---|
| [1300] | 490 | dataType = types[0]; | 
|---|
| [903] | 491 | } | 
|---|
|  | 492 | } | 
|---|
|  | 493 | else | 
|---|
|  | 494 | { | 
|---|
|  | 495 | cout << " hdutype= " << hdutype << endl; | 
|---|
| [1209] | 496 | throw IOExc("FitsFile::GetBlockType: this HDU type is unknown"); | 
|---|
| [903] | 497 | } | 
|---|
|  | 498 |  | 
|---|
| [971] | 499 | KeywordsIntoDVList(fileptr, dvl, hdunum); | 
|---|
| [903] | 500 | fits_close_file(fileptr,&status); | 
|---|
|  | 501 | } | 
|---|
|  | 502 |  | 
|---|
| [1136] | 503 |  | 
|---|
| [1300] | 504 | void FitsInFile::ReadHeader(int hdunum) | 
|---|
| [1045] | 505 | { | 
|---|
| [1300] | 506 | //  InitNull(); | 
|---|
| [1045] | 507 | int status = 0; | 
|---|
| [1334] | 508 | if (hdunum<0) | 
|---|
|  | 509 | { | 
|---|
| [1703] | 510 | throw PException(" FitsInFile::ReadHeader : hdu number must be not negative"); | 
|---|
| [1334] | 511 | } | 
|---|
| [1234] | 512 | if (hdunum != 0 ) hdunum_ = hdunum; | 
|---|
|  | 513 |  | 
|---|
|  | 514 | // si le numero de header non precise | 
|---|
|  | 515 | else | 
|---|
| [1045] | 516 | { | 
|---|
| [1234] | 517 | // si c'est le premier objet a lire | 
|---|
|  | 518 | if (hdunum_ == 0) | 
|---|
| [1045] | 519 | { | 
|---|
| [1234] | 520 | // on calcule le numero de header a lire | 
|---|
| [1246] | 521 | if (imageOnPrimary_ == true ) hdunum_ = 1; | 
|---|
| [1234] | 522 | else hdunum_ = 2; | 
|---|
| [1045] | 523 | } | 
|---|
| [1234] | 524 | // sinon objet suivant | 
|---|
|  | 525 | else hdunum_++; | 
|---|
| [1045] | 526 | } | 
|---|
| [1771] | 527 | getHeaderWithSophyaObject(); | 
|---|
| [1334] | 528 | if ( hdutype_ == FitsExtensionType_NULL ) | 
|---|
|  | 529 | { | 
|---|
|  | 530 | if (hdunum == 0 && hdunum_ == 1) | 
|---|
|  | 531 | { | 
|---|
|  | 532 | hdunum_++; | 
|---|
| [1771] | 533 | getHeaderWithSophyaObject(); | 
|---|
| [1334] | 534 | } | 
|---|
|  | 535 | else | 
|---|
|  | 536 | { | 
|---|
|  | 537 | cout << " WARNING (FitsInFile::ReadHeader) : no SOPHYA object on HDU number : " << hdunum_ << endl; | 
|---|
|  | 538 | } | 
|---|
|  | 539 | } | 
|---|
| [1418] | 540 | if ( hdutype_ == FitsExtensionType_EOF ) | 
|---|
|  | 541 | { | 
|---|
|  | 542 | throw PException("FitsFile::ReadHeader, attempt to read through EOF"); | 
|---|
|  | 543 | } | 
|---|
| [1045] | 544 | } | 
|---|
|  | 545 |  | 
|---|
| [1354] | 546 | string FitsInFile::getStringKeyword(int hdunum, string keyw, int& retStatus) | 
|---|
|  | 547 | { | 
|---|
|  | 548 | string s; | 
|---|
|  | 549 | retStatus = 0; | 
|---|
|  | 550 | int status = 0; | 
|---|
|  | 551 | if (hdunum != hdunum_ ) | 
|---|
|  | 552 | { | 
|---|
|  | 553 | int hdutype; | 
|---|
|  | 554 | fits_movabs_hdu(fptr_,hdunum,&hdutype,&status); | 
|---|
|  | 555 | } | 
|---|
|  | 556 |  | 
|---|
|  | 557 | char value[FLEN_VALUE]; | 
|---|
|  | 558 | char* keyname= const_cast<char*>(keyw.c_str()); | 
|---|
|  | 559 | fits_read_key_str(fptr_,keyname,value,NULL,&status); | 
|---|
|  | 560 | if (status == 0) | 
|---|
|  | 561 | s = string(value); | 
|---|
|  | 562 | else retStatus = status; | 
|---|
|  | 563 | if (hdunum != hdunum_ ) | 
|---|
|  | 564 | { | 
|---|
|  | 565 | int hdutype; | 
|---|
|  | 566 | if (hdunum_ != 0) | 
|---|
|  | 567 | fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status); | 
|---|
|  | 568 | else           fits_movabs_hdu(fptr_,1,&hdutype,&status); | 
|---|
|  | 569 |  | 
|---|
|  | 570 | } | 
|---|
|  | 571 | return s; | 
|---|
|  | 572 | } | 
|---|
|  | 573 | bool FitsInFile::hasKeyword(int hdunum, string keyw) | 
|---|
| [1353] | 574 | { | 
|---|
|  | 575 | bool has=false; | 
|---|
|  | 576 | int status = 0; | 
|---|
|  | 577 | if (hdunum != hdunum_ ) | 
|---|
|  | 578 | { | 
|---|
|  | 579 | int hdutype; | 
|---|
|  | 580 | fits_movabs_hdu(fptr_,hdunum,&hdutype,&status); | 
|---|
|  | 581 | } | 
|---|
| [1218] | 582 |  | 
|---|
| [1353] | 583 | char value[FLEN_VALUE]; | 
|---|
|  | 584 | char* keyname= const_cast<char*>(keyw.c_str()); | 
|---|
|  | 585 | fits_read_keyword(fptr_,keyname,value,NULL,&status); | 
|---|
|  | 586 | if (status == 0) | 
|---|
|  | 587 | has = true; | 
|---|
|  | 588 | else | 
|---|
|  | 589 | if (status == KEY_NO_EXIST ) status =0; | 
|---|
|  | 590 | else fits_report_error(stderr,status); | 
|---|
|  | 591 | if (hdunum != hdunum_ ) | 
|---|
|  | 592 | { | 
|---|
|  | 593 | int hdutype; | 
|---|
|  | 594 | if (hdunum_ != 0) | 
|---|
|  | 595 | fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status); | 
|---|
|  | 596 | else              fits_movabs_hdu(fptr_,1,&hdutype,&status); | 
|---|
|  | 597 |  | 
|---|
|  | 598 | } | 
|---|
|  | 599 | return has; | 
|---|
|  | 600 | } | 
|---|
|  | 601 |  | 
|---|
| [1771] | 602 | void FitsInFile::GetKeywordsFromHeader (int hdunum, list<FitsKeyword>& mots_cles) const | 
|---|
|  | 603 | { | 
|---|
|  | 604 | int status = 0; | 
|---|
|  | 605 | int hdutype; | 
|---|
|  | 606 | fits_movabs_hdu(fptr_,hdunum,&hdutype,&status); | 
|---|
|  | 607 | if( status ) fits_report_error(stderr,status); | 
|---|
|  | 608 |  | 
|---|
|  | 609 | // get number of keywords | 
|---|
|  | 610 | int nkeys,keypos; | 
|---|
|  | 611 | fits_get_hdrpos(fptr_, &nkeys, &keypos,&status); | 
|---|
|  | 612 | if( status ) fits_report_error(stderr,status); | 
|---|
|  | 613 | // shift with the number of mandatory keywords | 
|---|
|  | 614 | int num= 0; | 
|---|
|  | 615 | // if primary header | 
|---|
|  | 616 | if (hdunum == 1) | 
|---|
|  | 617 | { | 
|---|
|  | 618 | // read NAXIS | 
|---|
|  | 619 | int naxis=0; | 
|---|
|  | 620 | fits_read_key(fptr_,TINT,"NAXIS",&naxis,NULL,&status); | 
|---|
|  | 621 | // number of mandatory keywords | 
|---|
|  | 622 | num = naxis+3; | 
|---|
|  | 623 | } | 
|---|
|  | 624 | // extensions | 
|---|
|  | 625 | else | 
|---|
|  | 626 | { | 
|---|
|  | 627 | if (hdutype == IMAGE_HDU) | 
|---|
|  | 628 | { | 
|---|
|  | 629 | // read NAXIS | 
|---|
|  | 630 | int naxis=0; | 
|---|
|  | 631 | fits_read_key(fptr_,TINT,"NAXIS",&naxis,NULL,&status); | 
|---|
|  | 632 | // number of mandatory keywords | 
|---|
|  | 633 | num = naxis+5; | 
|---|
|  | 634 | } | 
|---|
|  | 635 | else | 
|---|
|  | 636 | if(hdutype == ASCII_TBL || hdutype == BINARY_TBL) | 
|---|
|  | 637 | { | 
|---|
|  | 638 | // number of mandatory keywords | 
|---|
|  | 639 | num = 8; | 
|---|
|  | 640 | } | 
|---|
|  | 641 | } | 
|---|
|  | 642 | int j; | 
|---|
|  | 643 | char keyname[LEN_KEYWORD]; | 
|---|
|  | 644 | char value[FLEN_VALUE]; | 
|---|
|  | 645 | char comment[FLEN_COMMENT]; | 
|---|
|  | 646 | for(j = num+1; j <= nkeys; j++) | 
|---|
|  | 647 | { | 
|---|
|  | 648 | char dtype; | 
|---|
|  | 649 | fits_read_keyn(fptr_,j,keyname,value,comment,&status); | 
|---|
|  | 650 | if(status) | 
|---|
|  | 651 | { | 
|---|
|  | 652 | fits_report_error(stderr,status); | 
|---|
|  | 653 | status=0; | 
|---|
|  | 654 | } | 
|---|
|  | 655 | string  kn(keyname); | 
|---|
|  | 656 | string  cm(comment); | 
|---|
|  | 657 | string  val(value); | 
|---|
|  | 658 | FitsKeyword kw(kn, val, cm); | 
|---|
|  | 659 | mots_cles.push_back(kw); | 
|---|
|  | 660 | } | 
|---|
|  | 661 | if (hdunum_ > 0) fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status); | 
|---|
|  | 662 |  | 
|---|
|  | 663 | } | 
|---|
| [1300] | 664 | void FitsInFile::GetImageParameters (fitsfile* fileptr,FitsDataType& dataType,int& naxis,vector<int>& naxisn) | 
|---|
| [1218] | 665 | { | 
|---|
|  | 666 | int hdunum=0; | 
|---|
| [1334] | 667 | //    cout << " Reading a FITS image in HDU : " << fits_get_hdu_num(fileptr,&hdunum)  << endl; | 
|---|
| [1218] | 668 | int status= 0; | 
|---|
|  | 669 |  | 
|---|
|  | 670 | // bits per pixels | 
|---|
| [1300] | 671 | int bitpix=0; | 
|---|
| [1218] | 672 | fits_read_key(fileptr,TINT,"BITPIX",&bitpix,NULL,&status); | 
|---|
|  | 673 | if( status )  printerror( status ); | 
|---|
| [1300] | 674 | if(bitpix == DOUBLE_IMG) dataType = FitsDataType_double; | 
|---|
|  | 675 | else if(bitpix == FLOAT_IMG) dataType = FitsDataType_float; | 
|---|
|  | 676 | else if(bitpix == LONG_IMG || bitpix == SHORT_IMG ) dataType = FitsDataType_int; | 
|---|
|  | 677 | else if (bitpix == BYTE_IMG) dataType = FitsDataType_char; | 
|---|
|  | 678 | else | 
|---|
|  | 679 | { | 
|---|
|  | 680 | cout << " bitpix= " << bitpix << endl; | 
|---|
|  | 681 | throw PException(" FitsFile::GetImageParameters : unsupported FITS data type"); | 
|---|
|  | 682 | } | 
|---|
| [1218] | 683 |  | 
|---|
|  | 684 | // number of dimensions in the FITS array | 
|---|
|  | 685 | naxis= 0; | 
|---|
|  | 686 | fits_read_key(fileptr,TINT,"NAXIS",&naxis,NULL,&status); | 
|---|
|  | 687 | if( status ) printerror( status ); | 
|---|
|  | 688 | // read the NAXISn keywords to get image size | 
|---|
|  | 689 | long* naxes = new long[naxis] ; | 
|---|
|  | 690 | int nfound; | 
|---|
|  | 691 | fits_read_keys_lng(fileptr,"NAXIS",1,naxis,naxes,&nfound,&status); | 
|---|
|  | 692 | if( status ) printerror( status ); | 
|---|
|  | 693 | if (nfound != naxis ) | 
|---|
|  | 694 | cout << " WARNING : " << nfound << " axes found, expected naxis= " << naxis << endl; | 
|---|
|  | 695 | int k; | 
|---|
|  | 696 | for (k=0; k<naxis; k++) | 
|---|
|  | 697 | { | 
|---|
|  | 698 | naxisn.push_back( (int)naxes[k] ); | 
|---|
|  | 699 | } | 
|---|
|  | 700 | delete [] naxes; | 
|---|
|  | 701 | } | 
|---|
|  | 702 |  | 
|---|
|  | 703 |  | 
|---|
|  | 704 |  | 
|---|
|  | 705 |  | 
|---|
|  | 706 | /*! \fn DVList SOPHYA::FitsInFile::DVListFromPrimaryHeader() const | 
|---|
|  | 707 |  | 
|---|
|  | 708 | \return the keywords of primary header in a DVList | 
|---|
|  | 709 |  | 
|---|
|  | 710 | */ | 
|---|
| [1143] | 711 | DVList  FitsInFile::DVListFromPrimaryHeader() const | 
|---|
|  | 712 | { | 
|---|
|  | 713 | int status; | 
|---|
|  | 714 | DVList dvl; | 
|---|
|  | 715 | KeywordsIntoDVList(fptr_, dvl, 1); | 
|---|
|  | 716 | int hdutype = 0; | 
|---|
|  | 717 | if (hdunum_ > 0) fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status); | 
|---|
|  | 718 | return dvl; | 
|---|
|  | 719 | } | 
|---|
| [1136] | 720 |  | 
|---|
| [1771] | 721 | void FitsInFile::getHeaderWithSophyaObject() | 
|---|
| [971] | 722 | { | 
|---|
| [1300] | 723 | // si hdunum_ > 1 lit le header correspondant | 
|---|
|  | 724 | // si hdunum_ = 1 se positionne au (et lit le) premier header qui | 
|---|
|  | 725 | //                contient reellement un objet | 
|---|
| [1234] | 726 | int status=0; | 
|---|
|  | 727 | if (hdunum_ < 1)  throw PException(" attempt to read hdunum < 1"); | 
|---|
| [1300] | 728 | InitNull(); | 
|---|
| [1234] | 729 | if (hdunum_ == 1) | 
|---|
| [839] | 730 | { | 
|---|
| [1234] | 731 | // presence of image ? | 
|---|
|  | 732 | int naxis= 0; | 
|---|
|  | 733 | fits_read_key(fptr_,TINT,"NAXIS",&naxis,NULL,&status); | 
|---|
|  | 734 | if( status ) printerror( status ); | 
|---|
|  | 735 | if (naxis > 0 )       // there is an image | 
|---|
|  | 736 | { | 
|---|
| [1334] | 737 | hdutype_ = FitsExtensionType_IMAGE; | 
|---|
| [1300] | 738 | GetImageParameters (fptr_, imageDataType_, naxis_, naxisn_); | 
|---|
| [1234] | 739 | nbData_ =  1; | 
|---|
|  | 740 | int k; | 
|---|
|  | 741 | for (k=0; k<naxis_; k++) if (naxisn_[k] > 0) nbData_ *= naxisn_[k]; | 
|---|
|  | 742 | KeywordsIntoDVList(fptr_, dvl_,hdunum_); | 
|---|
|  | 743 | } | 
|---|
|  | 744 | else | 
|---|
|  | 745 | { | 
|---|
| [1334] | 746 | hdutype_ = FitsExtensionType_NULL; | 
|---|
|  | 747 | KeywordsIntoDVList(fptr_, dvl_,hdunum_); | 
|---|
| [1234] | 748 | } | 
|---|
| [839] | 749 | } | 
|---|
| [1234] | 750 | else | 
|---|
| [839] | 751 | { | 
|---|
| [1234] | 752 | int hdutype; | 
|---|
|  | 753 | fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status); | 
|---|
| [1334] | 754 |  | 
|---|
|  | 755 | if( status ) | 
|---|
| [1234] | 756 | { | 
|---|
| [1334] | 757 | if (status == END_OF_FILE) | 
|---|
|  | 758 | { | 
|---|
|  | 759 | hdutype_= FitsExtensionType_EOF; | 
|---|
|  | 760 | status =0; | 
|---|
|  | 761 | return; | 
|---|
|  | 762 | } | 
|---|
|  | 763 | else | 
|---|
|  | 764 | { | 
|---|
| [1771] | 765 | cout << "WARNING (FitsInFile::getHeaderWithSophyaObject) : error during movabs" << endl; | 
|---|
| [1334] | 766 | hdutype_= FitsExtensionType_ERROR; | 
|---|
|  | 767 | status =0; | 
|---|
|  | 768 | return; | 
|---|
|  | 769 | } | 
|---|
|  | 770 | // printerror( status,":FitsInFile::getHeader : erreur movabs"); | 
|---|
|  | 771 | } | 
|---|
| [2197] | 772 |  | 
|---|
|  | 773 |  | 
|---|
| [1334] | 774 | if(hdutype == IMAGE_HDU) | 
|---|
|  | 775 | { | 
|---|
|  | 776 | hdutype_= FitsExtensionType_IMAGE; | 
|---|
| [1300] | 777 | GetImageParameters (fptr_, imageDataType_, naxis_, naxisn_); | 
|---|
| [1234] | 778 | nbData_ =  1; | 
|---|
|  | 779 | int k; | 
|---|
|  | 780 | for (k=0; k<naxis_; k++) if (naxisn_[k] > 0) nbData_ *= naxisn_[k]; | 
|---|
|  | 781 | KeywordsIntoDVList(fptr_, dvl_,hdunum_); | 
|---|
|  | 782 | } | 
|---|
| [1334] | 783 | else if(hdutype == ASCII_TBL) | 
|---|
| [1234] | 784 | { | 
|---|
| [1334] | 785 | hdutype_= FitsExtensionType_ASCII_TBL; | 
|---|
| [1234] | 786 | GetBinTabParameters(fptr_,nbcols_, nrows_,repeat_, noms_, types_, taille_des_chaines_); | 
|---|
|  | 787 | KeywordsIntoDVList(fptr_, dvl_, hdunum_); | 
|---|
|  | 788 | } | 
|---|
| [1334] | 789 | else if(hdutype == BINARY_TBL) | 
|---|
|  | 790 | { | 
|---|
|  | 791 | hdutype_= FitsExtensionType_BINARY_TBL; | 
|---|
|  | 792 | GetBinTabParameters(fptr_,nbcols_, nrows_,repeat_, noms_, types_, taille_des_chaines_); | 
|---|
|  | 793 | KeywordsIntoDVList(fptr_, dvl_, hdunum_); | 
|---|
|  | 794 | } | 
|---|
|  | 795 | else | 
|---|
|  | 796 | { | 
|---|
|  | 797 | hdutype_= FitsExtensionType_NULL; | 
|---|
|  | 798 | KeywordsIntoDVList(fptr_, dvl_, hdunum_); | 
|---|
|  | 799 | } | 
|---|
| [2197] | 800 |  | 
|---|
| [839] | 801 | } | 
|---|
| [2197] | 802 | if (hdutype_ == FitsExtensionType_BINARY_TBL || hdutype_ == FitsExtensionType_ASCII_TBL) | 
|---|
|  | 803 | { | 
|---|
|  | 804 | bfl_ = BufferLine(types_); | 
|---|
|  | 805 | } | 
|---|
| [971] | 806 | } | 
|---|
| [839] | 807 |  | 
|---|
| [1136] | 808 |  | 
|---|
| [1234] | 809 | void FitsInFile::moveToFollowingHeader() | 
|---|
|  | 810 | { | 
|---|
|  | 811 | int status = 0; | 
|---|
|  | 812 | hdunum_++; | 
|---|
| [1771] | 813 | getHeaderWithSophyaObject(); | 
|---|
| [1334] | 814 | if ( hdutype_ == FitsExtensionType_NULL ) | 
|---|
|  | 815 | { | 
|---|
|  | 816 | cout << " WARNING (FitsInFile::ReadHeader) : no SOPHYA object on HDU number : " << hdunum_ << endl; | 
|---|
|  | 817 |  | 
|---|
|  | 818 | } | 
|---|
| [1234] | 819 | } | 
|---|
| [1218] | 820 |  | 
|---|
|  | 821 |  | 
|---|
|  | 822 |  | 
|---|
| [1234] | 823 |  | 
|---|
|  | 824 |  | 
|---|
| [1218] | 825 | /*! \fn int  SOPHYA::FitsInFile::NbColsFromFits() const | 
|---|
|  | 826 | \return number of columns (return 1 if IMAGE) | 
|---|
|  | 827 | */ | 
|---|
| [1136] | 828 | int  FitsInFile::NbColsFromFits() const | 
|---|
| [839] | 829 | { | 
|---|
| [1334] | 830 | if(hdutype_ == FitsExtensionType_BINARY_TBL) return nbcols_; | 
|---|
| [971] | 831 | else | 
|---|
| [1334] | 832 | if(hdutype_ == FitsExtensionType_ASCII_TBL ||  hdutype_ == FitsExtensionType_IMAGE) return 1; | 
|---|
| [839] | 833 | else | 
|---|
|  | 834 | { | 
|---|
| [1379] | 835 | cout << " hdutype= " << (int) hdutype_ << endl; | 
|---|
| [1334] | 836 | throw PException("FitsFile::NbColsFromFits, HDU  not supported"); | 
|---|
| [839] | 837 | } | 
|---|
|  | 838 | } | 
|---|
|  | 839 |  | 
|---|
| [1218] | 840 | /*! \fn  int SOPHYA::FitsInFile::NentriesFromFits(int nocol) const | 
|---|
|  | 841 | \return number of data in the current IMAGE extension on FITS file, or number | 
|---|
|  | 842 | of data of column number 'nocol' of the current BINTABLE extension | 
|---|
|  | 843 | */ | 
|---|
| [1136] | 844 | int FitsInFile::NentriesFromFits(int nocol) const | 
|---|
| [839] | 845 | { | 
|---|
| [1334] | 846 | if(hdutype_ == FitsExtensionType_BINARY_TBL)   return nrows_*repeat_[nocol]; | 
|---|
| [1136] | 847 | else | 
|---|
| [1334] | 848 | if(hdutype_ == FitsExtensionType_ASCII_TBL) return nrows_; | 
|---|
| [1136] | 849 | else | 
|---|
| [1334] | 850 | if(hdutype_ == FitsExtensionType_IMAGE) return nbData_; | 
|---|
| [1136] | 851 | else | 
|---|
| [839] | 852 | { | 
|---|
| [1379] | 853 | cout << "hdutype= " << (int) hdutype_ << endl; | 
|---|
| [1334] | 854 | throw PException("FitsFile::NentriesFromFits, this HDU is not supported"); | 
|---|
| [839] | 855 | } | 
|---|
|  | 856 | } | 
|---|
|  | 857 |  | 
|---|
| [1218] | 858 | /*! \fn char SOPHYA::FitsInFile::ColTypeFromFits(int nocol) const | 
|---|
|  | 859 |  | 
|---|
|  | 860 | return a character denoting data type of column number 'nocol' in a BINTABLE : | 
|---|
|  | 861 |  | 
|---|
|  | 862 | D : double | 
|---|
|  | 863 |  | 
|---|
|  | 864 | E : float | 
|---|
|  | 865 |  | 
|---|
|  | 866 | I : integer | 
|---|
|  | 867 |  | 
|---|
|  | 868 | S : character string | 
|---|
|  | 869 |  | 
|---|
|  | 870 | */ | 
|---|
|  | 871 |  | 
|---|
| [1300] | 872 | FitsFile::FitsDataType FitsInFile::ColTypeFromFits(int nocol) const | 
|---|
| [839] | 873 | { | 
|---|
| [1334] | 874 | if(hdutype_ != FitsExtensionType_ASCII_TBL && hdutype_ != FitsExtensionType_BINARY_TBL) | 
|---|
| [839] | 875 | { | 
|---|
| [1136] | 876 | throw IOExc("FitsFile::TypeFromFits, this HDU is not an ASCII table nor a binary table"); | 
|---|
| [839] | 877 | } | 
|---|
| [1136] | 878 | return types_[nocol]; | 
|---|
| [839] | 879 | } | 
|---|
| [1218] | 880 |  | 
|---|
|  | 881 |  | 
|---|
|  | 882 | /*! \fn string SOPHYA::FitsInFile::ColNameFromFits(int nocol) const | 
|---|
|  | 883 |  | 
|---|
|  | 884 | \return name of the column number 'nocol' of the current BINTABLE extension | 
|---|
|  | 885 | */ | 
|---|
|  | 886 |  | 
|---|
| [1136] | 887 | string FitsInFile::ColNameFromFits(int nocol) const | 
|---|
| [839] | 888 | { | 
|---|
| [1334] | 889 | if(hdutype_ != FitsExtensionType_ASCII_TBL && hdutype_ != FitsExtensionType_BINARY_TBL) | 
|---|
| [1045] | 890 | { | 
|---|
| [1136] | 891 | throw IOExc("FitsFile::TypeFromFits, this HDU is not an ASCII table nor a binary table"); | 
|---|
| [1045] | 892 | } | 
|---|
| [1136] | 893 | return noms_[nocol]; | 
|---|
| [839] | 894 | } | 
|---|
|  | 895 |  | 
|---|
| [1218] | 896 | /*! \fn int DSOPHYA::FitsInFile::ColStringLengthFromFits(int nocol) const | 
|---|
|  | 897 |  | 
|---|
|  | 898 | \return number of characters of each data  for the column number 'nocol' (if char* typed) of the current BINTABLE extension | 
|---|
|  | 899 | */ | 
|---|
|  | 900 |  | 
|---|
| [1136] | 901 | int FitsInFile::ColStringLengthFromFits(int nocol) const | 
|---|
| [839] | 902 | { | 
|---|
| [1334] | 903 | if(hdutype_ != FitsExtensionType_ASCII_TBL && hdutype_ != FitsExtensionType_BINARY_TBL) | 
|---|
| [1136] | 904 | { | 
|---|
|  | 905 | throw IOExc("FitsFile::TypeFromFits, this HDU is not an ASCII table nor a binary table"); | 
|---|
|  | 906 | } | 
|---|
|  | 907 | int index=-1; | 
|---|
|  | 908 | int k; | 
|---|
|  | 909 | for (k=0; k<=nocol; k++) | 
|---|
|  | 910 | { | 
|---|
| [1300] | 911 | if (types_[k] == FitsDataType_char) index++; | 
|---|
| [1136] | 912 | } | 
|---|
|  | 913 | return  taille_des_chaines_[index]; | 
|---|
| [839] | 914 | } | 
|---|
| [1218] | 915 |  | 
|---|
| [2197] | 916 | const FitsFile::BufferLine&   FitsInFile::GetBufferLine(long NoLine) | 
|---|
|  | 917 | { | 
|---|
|  | 918 | int status= 0; | 
|---|
|  | 919 | int    anynul; | 
|---|
|  | 920 | double dnull= dnull_; | 
|---|
|  | 921 | float fnull= fnull_; | 
|---|
|  | 922 | int inull= inull_; | 
|---|
|  | 923 | char* cnull=  const_cast<char*>(cnull_.c_str()); | 
|---|
|  | 924 | int ncol; | 
|---|
|  | 925 | long nels=1; | 
|---|
|  | 926 | double dval; | 
|---|
|  | 927 | float  fval; | 
|---|
|  | 928 | int    ival; | 
|---|
| [1218] | 929 |  | 
|---|
| [2197] | 930 | // pas d'entier de longueur superieure a 32 bits, pour cfitsio | 
|---|
|  | 931 | int    lval; | 
|---|
| [1218] | 932 |  | 
|---|
| [2197] | 933 | unsigned char usval; | 
|---|
|  | 934 | int rang = 0; | 
|---|
|  | 935 | int ccount = 0; | 
|---|
|  | 936 | for (ncol=0; ncol<nbcols_; ncol++) | 
|---|
|  | 937 | { | 
|---|
|  | 938 | rang =  bfl_.identificateur()[ncol].second; | 
|---|
|  | 939 | //      cout << " fitsfile : relecture col " << ncol << " type " << bfl_.identificateur()[ncol].first << " rang " << rang << endl; | 
|---|
|  | 940 | switch (bfl_.identificateur()[ncol].first) | 
|---|
|  | 941 | { | 
|---|
|  | 942 | case FitsDataType_double : | 
|---|
|  | 943 | fits_read_col(fptr_,TDOUBLE,ncol+1,NoLine+1,1,1,&dnull, &dval,&anynul,&status); | 
|---|
|  | 944 | bfl_.r_8Array(rang) = (r_8)dval; | 
|---|
|  | 945 | break; | 
|---|
|  | 946 | case FitsDataType_float : | 
|---|
|  | 947 | fits_read_col(fptr_,TFLOAT,ncol+1,NoLine+1,1,1,&fnull,&fval,&anynul,&status); | 
|---|
|  | 948 | bfl_.r_4Array(rang)  = (r_4)fval; | 
|---|
|  | 949 | break; | 
|---|
|  | 950 | case FitsDataType_short : | 
|---|
|  | 951 | fits_read_col(fptr_,TSHORT,ncol+1,NoLine+1,1,1,&inull,&ival, &anynul,&status); | 
|---|
|  | 952 | bfl_.int_2Array(rang) = (int_2)ival; | 
|---|
|  | 953 | break; | 
|---|
|  | 954 | case FitsDataType_int : | 
|---|
|  | 955 | fits_read_col(fptr_,TINT,ncol+1,NoLine+1,1,1,&inull,&ival, &anynul,&status); | 
|---|
|  | 956 | bfl_.int_4Array(rang) = (int_4)ival; | 
|---|
|  | 957 | break; | 
|---|
|  | 958 | case FitsDataType_long : | 
|---|
|  | 959 | fits_read_col(fptr_,TLONG,ncol+1,NoLine+1,1,1,&inull,&lval, &anynul,&status); | 
|---|
|  | 960 | bfl_.int_8Array(rang) = (int_8)lval; | 
|---|
|  | 961 | break; | 
|---|
|  | 962 | case FitsDataType_byte : | 
|---|
|  | 963 | fits_read_col(fptr_,TBYTE,ncol+1,NoLine+1,1,1,&inull, &usval, &anynul,&status); | 
|---|
|  | 964 | bfl_.u_charArray(rang) = usval; | 
|---|
|  | 965 | break; | 
|---|
|  | 966 | case FitsDataType_char : | 
|---|
|  | 967 | char* chaine = new char[taille_des_chaines_[ccount++]]; | 
|---|
|  | 968 | fits_read_col(fptr_,TSTRING,ncol+1,NoLine+1,1,1,cnull,&chaine,&anynul,&status); | 
|---|
|  | 969 | bfl_.stringArray(rang) = string(chaine); | 
|---|
|  | 970 | break; | 
|---|
|  | 971 | } | 
|---|
|  | 972 | if (status) | 
|---|
|  | 973 | { | 
|---|
|  | 974 | ResetStatus(status); | 
|---|
|  | 975 | break; | 
|---|
|  | 976 | } | 
|---|
|  | 977 | } | 
|---|
|  | 978 | //  cout << " fitsfile : ligne relue " << endl; | 
|---|
|  | 979 | //  bfl_.Print(); | 
|---|
|  | 980 | return bfl_; | 
|---|
|  | 981 | } | 
|---|
|  | 982 |  | 
|---|
|  | 983 |  | 
|---|
|  | 984 |  | 
|---|
| [1218] | 985 | /*! \fn void  SOPHYA::FitsInFile::GetBinTabLine(int NoLine, double* ddata, float* fdata, int* idata, char ** cdata) | 
|---|
|  | 986 |  | 
|---|
|  | 987 | Get the NoLine-th 'line'  from the current BINTABLE extension on FITS file, | 
|---|
|  | 988 | */ | 
|---|
|  | 989 |  | 
|---|
| [1193] | 990 | void  FitsInFile::GetBinTabLine(int NoLine, double* ddata, float* fdata, int* idata, char ** cdata) | 
|---|
| [839] | 991 | { | 
|---|
|  | 992 | int status= 0; | 
|---|
| [1978] | 993 | int    anynul; | 
|---|
|  | 994 | double dnull= dnull_; | 
|---|
|  | 995 | float fnull= fnull_; | 
|---|
|  | 996 | int inull= inull_; | 
|---|
|  | 997 | char* cnull= const_cast<char*>(cnull_.c_str()); | 
|---|
| [1136] | 998 | int dcount = 0.; | 
|---|
|  | 999 | int fcount = 0.; | 
|---|
|  | 1000 | int icount = 0; | 
|---|
|  | 1001 | int ccount =0; | 
|---|
|  | 1002 | int ncol; | 
|---|
|  | 1003 | long nels=1; | 
|---|
| [1499] | 1004 | int ligneAsolue = NoLine+1; | 
|---|
| [1136] | 1005 | for (ncol=0; ncol<nbcols_; ncol++) | 
|---|
| [861] | 1006 | { | 
|---|
| [1499] | 1007 | int repetition =repeat_[ncol]; | 
|---|
|  | 1008 | int ligneALire = ligneAsolue/repetition; | 
|---|
|  | 1009 | int premierElement  = ligneAsolue-ligneALire*repetition; | 
|---|
|  | 1010 | if (premierElement != 0 ) | 
|---|
|  | 1011 | { | 
|---|
|  | 1012 | ligneALire++; | 
|---|
|  | 1013 | } | 
|---|
|  | 1014 | else premierElement = repetition; | 
|---|
|  | 1015 |  | 
|---|
| [1136] | 1016 | switch (types_[ncol]) | 
|---|
|  | 1017 | { | 
|---|
| [1300] | 1018 | case FitsDataType_double : | 
|---|
| [1499] | 1019 | { | 
|---|
| [1978] | 1020 | fits_read_col(fptr_,TDOUBLE,ncol+1,ligneALire,premierElement,1,&dnull,&ddata[dcount++],&anynul,&status); | 
|---|
| [1136] | 1021 | break; | 
|---|
| [1499] | 1022 | } | 
|---|
| [2197] | 1023 | case FitsDataType_float : | 
|---|
|  | 1024 | { | 
|---|
|  | 1025 | fits_read_col(fptr_,TFLOAT,ncol+1,ligneALire,premierElement,1,&fnull,&fdata[fcount++],&anynul,&status); | 
|---|
|  | 1026 | break; | 
|---|
|  | 1027 | } | 
|---|
| [1300] | 1028 | case  FitsDataType_int : | 
|---|
| [2197] | 1029 | { | 
|---|
|  | 1030 | fits_read_col(fptr_,TINT,ncol+1,ligneALire,premierElement,1,&inull,&idata[icount++], | 
|---|
| [1978] | 1031 | &anynul,&status); | 
|---|
| [2197] | 1032 | break; | 
|---|
|  | 1033 | } | 
|---|
| [1499] | 1034 | case  FitsDataType_long : | 
|---|
| [2197] | 1035 | { | 
|---|
|  | 1036 | fits_read_col(fptr_,TLONG,ncol+1,ligneALire,premierElement,1,&inull,&idata[icount++], &anynul,&status); | 
|---|
|  | 1037 | break; | 
|---|
|  | 1038 | } | 
|---|
| [1499] | 1039 | case  FitsDataType_byte : | 
|---|
|  | 1040 | { | 
|---|
|  | 1041 | unsigned char uschar = 0; | 
|---|
| [1978] | 1042 | fits_read_col(fptr_,TBYTE,ncol+1,ligneALire,premierElement,1,&inull,&uschar, &anynul,&status); | 
|---|
| [1499] | 1043 | idata[icount++] = (int)uschar; | 
|---|
| [2197] | 1044 | break; | 
|---|
| [1499] | 1045 | } | 
|---|
| [1300] | 1046 | case FitsDataType_char : | 
|---|
| [2197] | 1047 | { | 
|---|
|  | 1048 | fits_read_col(fptr_,TSTRING,ncol+1,ligneALire,premierElement,1,cnull,&cdata[ccount++],&anynul,&status); | 
|---|
|  | 1049 | break; | 
|---|
|  | 1050 | } | 
|---|
|  | 1051 | default: | 
|---|
|  | 1052 | { | 
|---|
|  | 1053 | throw PException(" FitsInFile::GetBinTabLine : unsupported FITS data type"); | 
|---|
|  | 1054 | } | 
|---|
| [1136] | 1055 | } | 
|---|
|  | 1056 | if (status) | 
|---|
|  | 1057 | { | 
|---|
|  | 1058 | ResetStatus(status); | 
|---|
|  | 1059 | break; | 
|---|
|  | 1060 | } | 
|---|
| [861] | 1061 | } | 
|---|
| [903] | 1062 | } | 
|---|
| [839] | 1063 |  | 
|---|
| [1218] | 1064 | /*! \fn void   SOPHYA::FitsInFile::GetBinTabLine(long NoLine,  BnTblLine& ligne) | 
|---|
|  | 1065 | Get the NoLine-th 'line'  from the current BINTABLE extension on FITS file, | 
|---|
|  | 1066 | */ | 
|---|
| [1193] | 1067 | void   FitsInFile::GetBinTabLine(long NoLine,  BnTblLine& ligne) | 
|---|
|  | 1068 | { | 
|---|
|  | 1069 | int status= 0; | 
|---|
| [1978] | 1070 | int    anynul; | 
|---|
|  | 1071 | double dnull= dnull_; | 
|---|
|  | 1072 | float fnull= fnull_; | 
|---|
|  | 1073 | int inull= inull_; | 
|---|
|  | 1074 | char* cnull=  const_cast<char*>(cnull_.c_str()); | 
|---|
| [1193] | 1075 | int dcount = 0.; | 
|---|
|  | 1076 | int fcount = 0.; | 
|---|
|  | 1077 | int icount = 0; | 
|---|
| [2233] | 1078 | int lcount = 0; | 
|---|
|  | 1079 | int bcount = 0; | 
|---|
| [1193] | 1080 | int ccount =0; | 
|---|
|  | 1081 | int ncol; | 
|---|
|  | 1082 | long nels=1; | 
|---|
|  | 1083 | for (ncol=0; ncol<nbcols_; ncol++) | 
|---|
|  | 1084 | { | 
|---|
|  | 1085 | switch (types_[ncol]) | 
|---|
|  | 1086 | { | 
|---|
| [1300] | 1087 | case FitsDataType_double : | 
|---|
| [2197] | 1088 | { | 
|---|
|  | 1089 | fits_read_col(fptr_,TDOUBLE,ncol+1,NoLine+1,1,1,&dnull,&ligne.ddata_[dcount++],&anynul,&status); | 
|---|
|  | 1090 | break; | 
|---|
|  | 1091 | } | 
|---|
| [1300] | 1092 | case FitsDataType_float : | 
|---|
| [2197] | 1093 | { | 
|---|
|  | 1094 | fits_read_col(fptr_,TFLOAT,ncol+1,NoLine+1,1,1,&fnull,&ligne.fdata_[fcount++],&anynul,&status); | 
|---|
|  | 1095 | break; | 
|---|
|  | 1096 | } | 
|---|
| [1300] | 1097 | case FitsDataType_int : | 
|---|
| [2197] | 1098 | { | 
|---|
|  | 1099 | fits_read_col(fptr_,TINT,ncol+1,NoLine+1,1,1,&inull,&ligne.idata_[icount++], &anynul,&status); | 
|---|
|  | 1100 | break; | 
|---|
|  | 1101 | } | 
|---|
| [1359] | 1102 | case FitsDataType_long : | 
|---|
| [2197] | 1103 | { | 
|---|
| [2233] | 1104 | fits_read_col(fptr_,TLONG,ncol+1,NoLine+1,1,1,&inull,&ligne.ldata_[lcount++], &anynul,&status); | 
|---|
| [2197] | 1105 | break; | 
|---|
|  | 1106 | } | 
|---|
| [1359] | 1107 | case FitsDataType_byte : | 
|---|
| [2197] | 1108 | { | 
|---|
| [2233] | 1109 | fits_read_col(fptr_,TBYTE,ncol+1,NoLine+1,1,1,&inull,&ligne.bdata_[bcount++], &anynul,&status); | 
|---|
| [2197] | 1110 | break; | 
|---|
|  | 1111 | } | 
|---|
| [1300] | 1112 | case FitsDataType_char : | 
|---|
| [2197] | 1113 | { | 
|---|
|  | 1114 | char* chaine = new char[taille_des_chaines_[ccount]]; | 
|---|
|  | 1115 | fits_read_col(fptr_,TSTRING,ncol+1,NoLine+1,1,1,cnull,&chaine,&anynul,&status); | 
|---|
|  | 1116 | ligne.cdata_[ccount++] = string(chaine); | 
|---|
|  | 1117 | break; | 
|---|
|  | 1118 | } | 
|---|
|  | 1119 | default: | 
|---|
|  | 1120 | { | 
|---|
|  | 1121 | throw PException(" FitsInFile::GetBinTabLine : unsupported FITS data type"); | 
|---|
|  | 1122 | } | 
|---|
| [1193] | 1123 | } | 
|---|
|  | 1124 | if (status) | 
|---|
|  | 1125 | { | 
|---|
|  | 1126 | ResetStatus(status); | 
|---|
|  | 1127 | break; | 
|---|
|  | 1128 | } | 
|---|
|  | 1129 | } | 
|---|
|  | 1130 | } | 
|---|
|  | 1131 |  | 
|---|
| [2197] | 1132 |  | 
|---|
|  | 1133 |  | 
|---|
| [1218] | 1134 | /*! \fn void SOPHYA::FitsInFile::GetBinTabLine(int NoLine, float* fdata) | 
|---|
|  | 1135 |  | 
|---|
|  | 1136 | Get the NoLine-th float 'line'  from the current BINTABLE extension on FITS file, | 
|---|
|  | 1137 | */ | 
|---|
| [1136] | 1138 | void FitsInFile::GetBinTabLine(int NoLine, float* fdata) | 
|---|
| [903] | 1139 | { | 
|---|
| [1136] | 1140 | int status= 0; | 
|---|
| [1978] | 1141 | int    anynul; | 
|---|
|  | 1142 | float fnull= fnull_; | 
|---|
| [1136] | 1143 | long nels=1; | 
|---|
|  | 1144 | int ncol; | 
|---|
|  | 1145 | for (ncol=0; ncol<nbcols_; ncol++) | 
|---|
| [861] | 1146 | { | 
|---|
| [1978] | 1147 | fits_read_col(fptr_,TFLOAT,ncol+1,NoLine+1,1,1,&fnull,&fdata[ncol],&anynul,&status); | 
|---|
| [1136] | 1148 | if (status) | 
|---|
| [903] | 1149 | { | 
|---|
| [1136] | 1150 | ResetStatus(status); | 
|---|
|  | 1151 | break; | 
|---|
| [903] | 1152 | } | 
|---|
| [1136] | 1153 | } | 
|---|
|  | 1154 | } | 
|---|
| [839] | 1155 |  | 
|---|
| [2907] | 1156 | /*! | 
|---|
|  | 1157 | Get the NoLine-th float 'line'  from the current BINTABLE extension on FITS file, | 
|---|
|  | 1158 | */ | 
|---|
|  | 1159 | void FitsInFile::GetBinTabLine(int NoLine, double* ddata) | 
|---|
|  | 1160 | { | 
|---|
|  | 1161 | int status= 0; | 
|---|
|  | 1162 | int    anynul; | 
|---|
|  | 1163 | double dnull= fnull_; | 
|---|
|  | 1164 | long nels=1; | 
|---|
|  | 1165 | int ncol; | 
|---|
|  | 1166 | for (ncol=0; ncol<nbcols_; ncol++) | 
|---|
|  | 1167 | { | 
|---|
|  | 1168 | fits_read_col(fptr_, TDOUBLE, ncol+1,NoLine+1,1,1,&dnull,&ddata[ncol],&anynul,&status); | 
|---|
|  | 1169 | if (status) | 
|---|
|  | 1170 | { | 
|---|
|  | 1171 | ResetStatus(status); | 
|---|
|  | 1172 | break; | 
|---|
|  | 1173 | } | 
|---|
|  | 1174 | } | 
|---|
|  | 1175 | } | 
|---|
| [903] | 1176 |  | 
|---|
| [2907] | 1177 |  | 
|---|
| [1218] | 1178 | /*! \fn void SPOPHYA::FitsInFile::GetBinTabFCol(double* valeurs,int nentries, int NoCol) const | 
|---|
|  | 1179 |  | 
|---|
|  | 1180 | fill the array 'valeurs' with double data from the current BINTABLE extension on FITS file, from column number 'NoCol' | 
|---|
|  | 1181 |  | 
|---|
|  | 1182 | \param <nentries>  number of data to be read | 
|---|
|  | 1183 | */ | 
|---|
| [1379] | 1184 | void FitsInFile::GetBinTabFCol(r_8* valeurs,int nentries, int NoCol) const | 
|---|
| [839] | 1185 | { | 
|---|
|  | 1186 | int status= 0; | 
|---|
|  | 1187 | int DTYPE; | 
|---|
|  | 1188 | long repeat,width; | 
|---|
|  | 1189 | fits_get_coltype(fptr_, NoCol+1,&DTYPE,&repeat,&width,&status); | 
|---|
|  | 1190 | if( DTYPE != TDOUBLE) | 
|---|
|  | 1191 | { | 
|---|
| [1045] | 1192 | if (DTYPE == TFLOAT)  cout << " WARNING: reading double from float : conversion will be made by fitsio library" << endl; | 
|---|
|  | 1193 | else | 
|---|
|  | 1194 | throw IOExc("FitsFile::GetBinTabFCol, tentative de lecture non double"); | 
|---|
| [839] | 1195 | } | 
|---|
|  | 1196 | long nels=nentries; | 
|---|
| [1978] | 1197 | int    anynul; | 
|---|
|  | 1198 | double dnull= dnull_; | 
|---|
|  | 1199 |  | 
|---|
| [839] | 1200 | fits_read_col(fptr_,TDOUBLE,NoCol+1,1,1,nels,&dnull,valeurs, | 
|---|
| [1978] | 1201 | &anynul,&status); | 
|---|
| [1703] | 1202 | if( status ) | 
|---|
|  | 1203 | { | 
|---|
|  | 1204 | printerrorAndContinue( status,"erreur lecture de colonne" ); | 
|---|
|  | 1205 | } | 
|---|
| [839] | 1206 | } | 
|---|
|  | 1207 |  | 
|---|
| [1218] | 1208 | /*! \fn  void SOPHYA::FitsInFile::GetBinTabFCol(float* valeurs,int nentries, int NoCol) const | 
|---|
|  | 1209 |  | 
|---|
|  | 1210 | same as previous method with float data | 
|---|
|  | 1211 | */ | 
|---|
| [1379] | 1212 | void FitsInFile::GetBinTabFCol(r_4* valeurs,int nentries, int NoCol) const | 
|---|
| [839] | 1213 | { | 
|---|
|  | 1214 | int status= 0; | 
|---|
|  | 1215 | int DTYPE; | 
|---|
|  | 1216 | long repeat,width; | 
|---|
|  | 1217 | fits_get_coltype(fptr_, NoCol+1,&DTYPE,&repeat,&width,&status); | 
|---|
|  | 1218 | if( DTYPE != TFLOAT) | 
|---|
|  | 1219 | { | 
|---|
| [1045] | 1220 | if (DTYPE == TDOUBLE)  cout << " WARNING: reading float from double : conversion will be made by fitsio library" << endl; | 
|---|
|  | 1221 | else | 
|---|
|  | 1222 | throw IOExc("FitsFile::GetBinTabFCol, tentative de lecture non float"); | 
|---|
| [839] | 1223 | } | 
|---|
|  | 1224 | long nels=nentries; | 
|---|
| [1978] | 1225 | int    anynul; | 
|---|
|  | 1226 | float fnull= fnull_; | 
|---|
| [839] | 1227 | fits_read_col(fptr_,TFLOAT,NoCol+1,1,1,nels,&fnull,valeurs, | 
|---|
| [1978] | 1228 | &anynul,&status); | 
|---|
| [1703] | 1229 | if( status ) printerrorAndContinue( status,"erreur lecture de colonne" ); | 
|---|
| [839] | 1230 | } | 
|---|
| [1136] | 1231 |  | 
|---|
| [1218] | 1232 | /*! \fn void SOPHYA::FitsInFile::GetBinTabFCol(int* valeurs,int nentries, int NoCol) const | 
|---|
|  | 1233 |  | 
|---|
|  | 1234 | same as previous method with int data | 
|---|
|  | 1235 | */ | 
|---|
|  | 1236 |  | 
|---|
| [1379] | 1237 | void FitsInFile::GetBinTabFCol(int_4* valeurs,int nentries, int NoCol) const | 
|---|
| [839] | 1238 | { | 
|---|
|  | 1239 | int status= 0; | 
|---|
|  | 1240 | int DTYPE; | 
|---|
|  | 1241 | long repeat,width; | 
|---|
|  | 1242 | fits_get_coltype(fptr_, NoCol+1,&DTYPE,&repeat,&width,&status); | 
|---|
| [1752] | 1243 | if( DTYPE != TLONG &&  DTYPE != TINT) | 
|---|
| [839] | 1244 | { | 
|---|
| [1752] | 1245 | throw IOExc("FitsFile::GetBinTabFCol, probleme de lecture d'entiers"); | 
|---|
| [839] | 1246 | } | 
|---|
|  | 1247 | long nels=nentries; | 
|---|
| [1978] | 1248 | int    anynul; | 
|---|
|  | 1249 | int inull= inull_; | 
|---|
| [1752] | 1250 |  | 
|---|
|  | 1251 |  | 
|---|
|  | 1252 |  | 
|---|
|  | 1253 | // voir commentaire dans putColToFits() | 
|---|
| [839] | 1254 | fits_read_col(fptr_,TINT,NoCol+1,1,1,nels,&inull,valeurs, | 
|---|
| [1978] | 1255 | &anynul,&status); | 
|---|
| [1703] | 1256 | if( status ) printerrorAndContinue( status,"erreur lecture de colonne" ); | 
|---|
| [839] | 1257 | } | 
|---|
| [1136] | 1258 |  | 
|---|
| [1218] | 1259 | /*! \fn void SOPHYA::FitsInFile::GetBinTabFCol(char** valeurs, int nentries, int NoCol) const | 
|---|
|  | 1260 |  | 
|---|
|  | 1261 | same as previous method with char* data | 
|---|
|  | 1262 | */ | 
|---|
|  | 1263 |  | 
|---|
| [1136] | 1264 | void FitsInFile::GetBinTabFCol(char** valeurs, int nentries, int NoCol) const | 
|---|
| [839] | 1265 | { | 
|---|
|  | 1266 | int status= 0; | 
|---|
|  | 1267 | int DTYPE; | 
|---|
|  | 1268 | long repeat,width; | 
|---|
|  | 1269 | fits_get_coltype(fptr_, NoCol+1,&DTYPE,&repeat,&width,&status); | 
|---|
| [1300] | 1270 | if( DTYPE != TSTRING &&  DTYPE != TBYTE) | 
|---|
| [839] | 1271 | { | 
|---|
| [1300] | 1272 | throw IOExc("FitsFile::GetBinTabFCol, tentative de lecture non string"); | 
|---|
| [839] | 1273 | } | 
|---|
|  | 1274 | long nels=nentries; | 
|---|
| [1978] | 1275 | int    anynul; | 
|---|
|  | 1276 | char* cnull=  const_cast<char*>(cnull_.c_str()); | 
|---|
| [839] | 1277 | long frow=1; | 
|---|
|  | 1278 | long felem=1; | 
|---|
|  | 1279 | fits_read_col(fptr_,TSTRING,NoCol+1,frow,felem,nels,cnull,valeurs, | 
|---|
| [1978] | 1280 | &anynul,&status); | 
|---|
| [1703] | 1281 | if( status ) printerrorAndContinue( status,"erreur lecture de colonne" ); | 
|---|
| [839] | 1282 | } | 
|---|
| [1045] | 1283 |  | 
|---|
| [1218] | 1284 | /*! \fn void SOPHYA::FitsInFile::GetSingleColumn(double* map, int nentries) const | 
|---|
|  | 1285 | fill the array 'map' with double data from the current extension on FITS file. | 
|---|
|  | 1286 | If the extension is BINTABLE, the first column is provided. | 
|---|
|  | 1287 |  | 
|---|
|  | 1288 | \param <nentries>  number of data to be read | 
|---|
|  | 1289 | */ | 
|---|
| [1379] | 1290 | void FitsInFile::GetSingleColumn(r_8* map, int nentries) const | 
|---|
| [1136] | 1291 | { | 
|---|
|  | 1292 | int status = 0; | 
|---|
| [1334] | 1293 | if(hdutype_ == FitsExtensionType_IMAGE) | 
|---|
| [1045] | 1294 | { | 
|---|
| [1136] | 1295 |  | 
|---|
| [1300] | 1296 | if(imageDataType_ != FitsDataType_double) | 
|---|
| [1047] | 1297 | { | 
|---|
| [1136] | 1298 | cout << " The data type on fits file is not double..."; | 
|---|
|  | 1299 | cout << " Conversion to double achieved by cfitsio lib" << endl; | 
|---|
| [1047] | 1300 | } | 
|---|
| [1136] | 1301 |  | 
|---|
| [1978] | 1302 | int    anynul; | 
|---|
|  | 1303 | double dnull= dnull_; | 
|---|
| [1136] | 1304 |  | 
|---|
|  | 1305 | long nels= nentries; | 
|---|
| [1978] | 1306 | fits_read_img(fptr_,TDOUBLE,1,nels,&dnull,map,&anynul,&status); | 
|---|
| [1136] | 1307 | if( status ) printerror( status ); | 
|---|
| [1045] | 1308 | } | 
|---|
| [1136] | 1309 | else | 
|---|
| [1334] | 1310 | if(hdutype_ == FitsExtensionType_ASCII_TBL || hdutype_ == FitsExtensionType_BINARY_TBL) | 
|---|
| [1136] | 1311 | { | 
|---|
|  | 1312 | GetBinTabFCol(map,nentries, 0); | 
|---|
|  | 1313 | } | 
|---|
|  | 1314 | else | 
|---|
|  | 1315 | { | 
|---|
| [1379] | 1316 | cout << " hdutype= " << (int) hdutype_ << endl; | 
|---|
| [1334] | 1317 | throw IOExc("FitsFile::GetSingleColumn, this HDU is unknown"); | 
|---|
| [1136] | 1318 | } | 
|---|
| [1045] | 1319 | } | 
|---|
|  | 1320 |  | 
|---|
| [1218] | 1321 | /*! \fn void SOPHYA::FitsInFile::GetSingleColumn(float* map, int nentries) const | 
|---|
|  | 1322 | same as above with float data | 
|---|
|  | 1323 | */ | 
|---|
| [1379] | 1324 | void FitsInFile::GetSingleColumn(r_4* map, int nentries) const | 
|---|
| [1045] | 1325 | { | 
|---|
| [1136] | 1326 | int status = 0; | 
|---|
| [1334] | 1327 | if(hdutype_ == FitsExtensionType_IMAGE) | 
|---|
| [1045] | 1328 | { | 
|---|
| [1300] | 1329 | if(imageDataType_ != FitsDataType_float) | 
|---|
| [1047] | 1330 | { | 
|---|
| [1136] | 1331 | cout << " The data type on fits file is not float "; | 
|---|
|  | 1332 | cout << " Conversion to float achieved by cfitsio lib" << endl; | 
|---|
| [1047] | 1333 | } | 
|---|
| [1978] | 1334 | int   anynul; | 
|---|
|  | 1335 | float fnull= fnull_; | 
|---|
| [1136] | 1336 |  | 
|---|
|  | 1337 | long nels= nentries; | 
|---|
| [1978] | 1338 | fits_read_img(fptr_,TFLOAT,1,nels,&fnull, map,&anynul,&status); | 
|---|
| [1136] | 1339 | if( status ) printerror( status ); | 
|---|
| [1045] | 1340 | } | 
|---|
| [839] | 1341 | else | 
|---|
| [1334] | 1342 | if(hdutype_ == FitsExtensionType_ASCII_TBL || hdutype_ == FitsExtensionType_BINARY_TBL) | 
|---|
| [1136] | 1343 | { | 
|---|
|  | 1344 | GetBinTabFCol(map,nentries, 0); | 
|---|
|  | 1345 | } | 
|---|
| [839] | 1346 | else | 
|---|
|  | 1347 | { | 
|---|
| [1379] | 1348 | cout << " hdutype= " << (int) hdutype_ << endl; | 
|---|
| [1136] | 1349 | throw IOExc("FitsFile::GetSingleColumn this HDU is unknown"); | 
|---|
| [839] | 1350 | } | 
|---|
|  | 1351 | } | 
|---|
|  | 1352 |  | 
|---|
| [1218] | 1353 | /*! \fn void SOPHYA::FitsInFile::GetSingleColumn( int* map, int nentries) const | 
|---|
|  | 1354 | same as above with int data | 
|---|
|  | 1355 | */ | 
|---|
| [1379] | 1356 | void FitsInFile::GetSingleColumn( int_4* map, int nentries) const | 
|---|
| [839] | 1357 | { | 
|---|
| [1136] | 1358 | int status = 0; | 
|---|
| [1334] | 1359 | if(hdutype_ == FitsExtensionType_IMAGE) | 
|---|
| [839] | 1360 | { | 
|---|
| [1300] | 1361 | if(imageDataType_ != FitsDataType_int) | 
|---|
| [1136] | 1362 | { | 
|---|
|  | 1363 | cout << " The data type on fits file is not int "; | 
|---|
|  | 1364 | cout << " Conversion to float achieved by cfitsio lib" << endl; | 
|---|
|  | 1365 | } | 
|---|
| [1978] | 1366 | int   anynul; | 
|---|
|  | 1367 | float fnull= fnull_; | 
|---|
| [1136] | 1368 |  | 
|---|
|  | 1369 | long nels= nentries; | 
|---|
| [1978] | 1370 | fits_read_img(fptr_,TINT,1,nels,&fnull,map,&anynul,&status); | 
|---|
| [1136] | 1371 | if( status ) printerror( status ); | 
|---|
| [839] | 1372 | } | 
|---|
|  | 1373 | else | 
|---|
| [1334] | 1374 | if(hdutype_ == FitsExtensionType_ASCII_TBL || hdutype_ == FitsExtensionType_BINARY_TBL) | 
|---|
| [1136] | 1375 | { | 
|---|
|  | 1376 | GetBinTabFCol(map,nentries, 0); | 
|---|
|  | 1377 | } | 
|---|
| [839] | 1378 | else | 
|---|
| [1136] | 1379 | { | 
|---|
| [1379] | 1380 | cout << " hdutype= " << (int) hdutype_ << endl; | 
|---|
| [1136] | 1381 | throw IOExc("FitsFile::GetSingleColumn this HDU is unknown"); | 
|---|
|  | 1382 | } | 
|---|
| [839] | 1383 | } | 
|---|
|  | 1384 |  | 
|---|
| [1136] | 1385 | void FitsInFile::GetBinTabParameters(fitsfile* fileptr, int& nbcols, int& nrows, | 
|---|
| [903] | 1386 | vector<int>& repeat, | 
|---|
|  | 1387 | vector<string>& noms, | 
|---|
| [1300] | 1388 | vector<FitsDataType>& types, | 
|---|
| [903] | 1389 | vector<int>&  taille_des_chaines) | 
|---|
| [839] | 1390 | { | 
|---|
|  | 1391 | int status= 0; | 
|---|
| [903] | 1392 | int hdunum=0; | 
|---|
|  | 1393 | int hdutype=0; | 
|---|
|  | 1394 | fits_get_hdu_num(fileptr,&hdunum); | 
|---|
|  | 1395 | fits_get_hdu_type(fileptr, &hdutype, &status); | 
|---|
|  | 1396 |  | 
|---|
|  | 1397 | if(hdutype != ASCII_TBL && hdutype != BINARY_TBL) | 
|---|
| [839] | 1398 | { | 
|---|
| [903] | 1399 | throw IOExc("FitsFile::GetBinTabParameters this HDU is not an ASCII table nor a binary table"); | 
|---|
| [839] | 1400 | } | 
|---|
| [1334] | 1401 | //  if(hdutype == ASCII_TBL) | 
|---|
|  | 1402 | //        cout << " Reading a FITS ascii table in HDU : " << hdunum << endl; | 
|---|
|  | 1403 | //  if(hdutype == BINARY_TBL) | 
|---|
|  | 1404 | //        cout << " Reading a FITS binary table in HDU : " << hdunum << endl; | 
|---|
| [839] | 1405 |  | 
|---|
|  | 1406 | // get the number of columns | 
|---|
| [903] | 1407 | fits_get_num_cols(fileptr, &nbcols,&status); | 
|---|
| [839] | 1408 | if( status ) printerror( status ); | 
|---|
|  | 1409 |  | 
|---|
|  | 1410 | // get the number of rows | 
|---|
|  | 1411 | long naxis2= 0; | 
|---|
| [903] | 1412 | fits_get_num_rows(fileptr,&naxis2,&status); | 
|---|
| [839] | 1413 | if( status ) printerror( status ); | 
|---|
| [903] | 1414 | nrows = (int)naxis2; | 
|---|
| [839] | 1415 |  | 
|---|
|  | 1416 | // get the datatype,  names and the repeat count | 
|---|
| [903] | 1417 | noms.clear(); | 
|---|
|  | 1418 | noms.reserve(nbcols); | 
|---|
|  | 1419 | types.clear(); | 
|---|
|  | 1420 | types.reserve(nbcols); | 
|---|
|  | 1421 | repeat.clear(); | 
|---|
|  | 1422 | repeat.reserve(nbcols); | 
|---|
|  | 1423 | taille_des_chaines.clear(); | 
|---|
| [839] | 1424 | char **ttype = new char*[nbcols]; | 
|---|
| [923] | 1425 | int ii; | 
|---|
| [1175] | 1426 | // | 
|---|
|  | 1427 | // | 
|---|
| [923] | 1428 | for (ii=0; ii < nbcols; ii++) ttype[ii]=new char[FLEN_VALUE]; | 
|---|
| [839] | 1429 | int nfound; | 
|---|
| [903] | 1430 | fits_read_keys_str(fileptr, "TTYPE",1,nbcols,ttype,&nfound, &status); | 
|---|
| [839] | 1431 | if( status ) printerror( status,"erreur lecture des noms de colonne"); | 
|---|
|  | 1432 | int rept=0; | 
|---|
| [1300] | 1433 | if(hdutype == ASCII_TBL) | 
|---|
| [839] | 1434 | { | 
|---|
| [1300] | 1435 | for(ii = 0; ii <  nbcols; ii++) | 
|---|
| [839] | 1436 | { | 
|---|
| [1300] | 1437 | int DTYPE; | 
|---|
|  | 1438 | long width; | 
|---|
|  | 1439 | long repete = 0; | 
|---|
|  | 1440 | fits_get_coltype(fileptr,ii+1,&DTYPE,&repete,&width,&status); | 
|---|
|  | 1441 | if( status ) printerror( status,"erreur lecture type de colonne"); | 
|---|
|  | 1442 | rept = repete; | 
|---|
|  | 1443 | noms.push_back(string(ttype[ii])); | 
|---|
|  | 1444 | switch (DTYPE) | 
|---|
|  | 1445 | { | 
|---|
|  | 1446 | case TDOUBLE : | 
|---|
|  | 1447 | types.push_back(FitsDataType_double); | 
|---|
|  | 1448 | break; | 
|---|
|  | 1449 | case TFLOAT : | 
|---|
|  | 1450 | types.push_back(FitsDataType_float); | 
|---|
|  | 1451 | break; | 
|---|
|  | 1452 | case TLONG : | 
|---|
| [1359] | 1453 | types.push_back(FitsDataType_long); | 
|---|
| [1300] | 1454 | break; | 
|---|
| [2197] | 1455 | case TINT : | 
|---|
| [1300] | 1456 | types.push_back(FitsDataType_int); | 
|---|
|  | 1457 | break; | 
|---|
| [2197] | 1458 | case TSHORT : | 
|---|
|  | 1459 | types.push_back(FitsDataType_short); | 
|---|
|  | 1460 | break; | 
|---|
| [1300] | 1461 | case TSTRING : | 
|---|
|  | 1462 | types.push_back(FitsDataType_char); | 
|---|
|  | 1463 | taille_des_chaines.push_back(width); | 
|---|
|  | 1464 | rept/=width; | 
|---|
|  | 1465 | break; | 
|---|
|  | 1466 | default : | 
|---|
|  | 1467 | cout << " field " << ii+1 << " DTYPE= " << DTYPE << endl; | 
|---|
|  | 1468 | throw IOExc("FitsFile::GetBinTabParameters, unsupported data type of field, for ASCII table"); | 
|---|
|  | 1469 | } | 
|---|
|  | 1470 | repeat.push_back(rept); | 
|---|
| [839] | 1471 | } | 
|---|
| [1136] | 1472 | } | 
|---|
| [1300] | 1473 | else | 
|---|
|  | 1474 | { | 
|---|
|  | 1475 | for(ii = 0; ii <  nbcols; ii++) | 
|---|
|  | 1476 | { | 
|---|
|  | 1477 | int DTYPE; | 
|---|
|  | 1478 | long width; | 
|---|
|  | 1479 | long repete = 0; | 
|---|
|  | 1480 | fits_get_coltype(fileptr,ii+1,&DTYPE,&repete,&width,&status); | 
|---|
|  | 1481 | if( status ) printerror( status,"erreur lecture type de colonne"); | 
|---|
|  | 1482 | rept = repete; | 
|---|
|  | 1483 | noms.push_back(string(ttype[ii])); | 
|---|
|  | 1484 | switch (DTYPE) | 
|---|
|  | 1485 | { | 
|---|
|  | 1486 | case TDOUBLE : | 
|---|
|  | 1487 | types.push_back(FitsDataType_double); | 
|---|
|  | 1488 | break; | 
|---|
|  | 1489 | case TFLOAT : | 
|---|
|  | 1490 | types.push_back(FitsDataType_float); | 
|---|
|  | 1491 | break; | 
|---|
|  | 1492 | case TLONG : | 
|---|
| [1359] | 1493 | types.push_back(FitsDataType_long); | 
|---|
| [1300] | 1494 | break; | 
|---|
|  | 1495 | case TINT : | 
|---|
|  | 1496 | types.push_back(FitsDataType_int); | 
|---|
|  | 1497 | break; | 
|---|
|  | 1498 | case TSHORT : | 
|---|
| [2197] | 1499 | types.push_back(FitsDataType_short); | 
|---|
| [1300] | 1500 | break; | 
|---|
|  | 1501 | case TSTRING : | 
|---|
|  | 1502 | types.push_back(FitsDataType_char); | 
|---|
|  | 1503 | taille_des_chaines.push_back(width); | 
|---|
|  | 1504 | rept/=width; | 
|---|
|  | 1505 | break; | 
|---|
|  | 1506 | case TBYTE : | 
|---|
| [1359] | 1507 | types.push_back(FitsDataType_byte); | 
|---|
| [1300] | 1508 | break; | 
|---|
|  | 1509 | default : | 
|---|
|  | 1510 | cout << " field " << ii+1 << " DTYPE= " << DTYPE << endl; | 
|---|
|  | 1511 | throw IOExc("FitsFile::GetBinTabParameters, unsupported data type of field, for BINTABLE"); | 
|---|
|  | 1512 | } | 
|---|
|  | 1513 | repeat.push_back(rept); | 
|---|
|  | 1514 | } | 
|---|
|  | 1515 | } | 
|---|
| [1136] | 1516 | for (ii=0; ii < nbcols; ii++) delete [] ttype[ii]; | 
|---|
|  | 1517 | delete [] ttype; | 
|---|
|  | 1518 | } | 
|---|
|  | 1519 |  | 
|---|
|  | 1520 | void FitsInFile::KeywordsIntoDVList(fitsfile* fileptr, DVList& dvl, int hdunum) | 
|---|
|  | 1521 | { | 
|---|
|  | 1522 | int status = 0; | 
|---|
|  | 1523 | int hdutype; | 
|---|
|  | 1524 | fits_movabs_hdu(fileptr,hdunum,&hdutype,&status); | 
|---|
|  | 1525 | if( status ) printerror( status,":KeywordsIntoDVList : erreur movabs"); | 
|---|
|  | 1526 | // get number of keywords | 
|---|
|  | 1527 | int nkeys,keypos; | 
|---|
|  | 1528 | fits_get_hdrpos(fileptr,&nkeys,&keypos,&status); | 
|---|
|  | 1529 | if( status ) printerror( status ); | 
|---|
|  | 1530 |  | 
|---|
|  | 1531 | // put  keywords in a DVList object | 
|---|
|  | 1532 | char keyname[LEN_KEYWORD]= ""; | 
|---|
|  | 1533 | char strval[FLEN_VALUE]= ""; | 
|---|
|  | 1534 | char dtype; | 
|---|
|  | 1535 | char card[FLEN_CARD]; | 
|---|
|  | 1536 | char *comkey = "COMMENT"; | 
|---|
| [1143] | 1537 | char comment[FLEN_COMMENT]; | 
|---|
| [1136] | 1538 |  | 
|---|
|  | 1539 | // shift with the number of mandatory keywords | 
|---|
| [1143] | 1540 | //  int num= 8; | 
|---|
|  | 1541 | int num= 0; | 
|---|
|  | 1542 | // primary header | 
|---|
|  | 1543 | if (hdunum == 1) | 
|---|
|  | 1544 | { | 
|---|
|  | 1545 | // read NAXIS | 
|---|
|  | 1546 | int naxis=0; | 
|---|
|  | 1547 | fits_read_key(fileptr,TINT,"NAXIS",&naxis,NULL,&status); | 
|---|
|  | 1548 | // number of mandatory keywords | 
|---|
|  | 1549 | num = naxis+3; | 
|---|
|  | 1550 | } | 
|---|
|  | 1551 | // extensions | 
|---|
|  | 1552 | else | 
|---|
|  | 1553 | { | 
|---|
|  | 1554 | if (hdutype == IMAGE_HDU) | 
|---|
|  | 1555 | { | 
|---|
|  | 1556 | // read NAXIS | 
|---|
|  | 1557 | int naxis=0; | 
|---|
|  | 1558 | fits_read_key(fileptr,TINT,"NAXIS",&naxis,NULL,&status); | 
|---|
|  | 1559 | // number of mandatory keywords | 
|---|
|  | 1560 | num = naxis+5; | 
|---|
|  | 1561 | } | 
|---|
|  | 1562 | else | 
|---|
|  | 1563 | if(hdutype == ASCII_TBL || hdutype == BINARY_TBL) | 
|---|
|  | 1564 | { | 
|---|
|  | 1565 | // number of mandatory keywords | 
|---|
|  | 1566 | num = 8; | 
|---|
|  | 1567 | } | 
|---|
|  | 1568 | } | 
|---|
| [1136] | 1569 | int j; | 
|---|
|  | 1570 | for(j = num+1; j <= nkeys; j++) | 
|---|
|  | 1571 | { | 
|---|
|  | 1572 | fits_read_keyn(fileptr,j,card,strval,NULL,&status); | 
|---|
|  | 1573 | if(status) printerror(status); | 
|---|
|  | 1574 |  | 
|---|
|  | 1575 | strncpy(keyname,card,LEN_KEYWORD-1); | 
|---|
|  | 1576 | if(strncmp(keyname,comkey,LEN_KEYWORD-1) != 0 && strlen(keyname) != 0 | 
|---|
|  | 1577 | && strlen(strval) != 0) | 
|---|
|  | 1578 | { | 
|---|
|  | 1579 | fits_get_keytype(strval,&dtype,&status); | 
|---|
|  | 1580 | if(status)  printerror(status); | 
|---|
|  | 1581 |  | 
|---|
|  | 1582 | strip(keyname, 'B',' '); | 
|---|
|  | 1583 | strip(strval, 'B',' '); | 
|---|
|  | 1584 | strip(strval, 'B','\''); | 
|---|
|  | 1585 |  | 
|---|
|  | 1586 | switch( dtype ) | 
|---|
|  | 1587 | { | 
|---|
|  | 1588 | case 'C': | 
|---|
| [1143] | 1589 | fits_read_key(fileptr,TSTRING,keyname,strval,comment,&status); | 
|---|
| [1978] | 1590 | if ( strncmp(keyname,"TTYPE",5) == 0 || | 
|---|
|  | 1591 | strncmp(keyname,"TFORM",5) == 0 || | 
|---|
|  | 1592 | strncmp(keyname,"TBCOL",5) == 0 ) break; | 
|---|
| [1143] | 1593 | dvl[keyname]= strval; | 
|---|
|  | 1594 | dvl.SetComment(keyname, comment); | 
|---|
| [1136] | 1595 | break; | 
|---|
|  | 1596 | case 'I': | 
|---|
|  | 1597 | int ival; | 
|---|
| [1143] | 1598 | fits_read_key(fileptr,TINT,keyname,&ival,comment,&status); | 
|---|
| [1136] | 1599 | dvl[keyname]= (int_4) ival;             // Portage mac DY | 
|---|
| [1143] | 1600 | dvl.SetComment(keyname, comment); | 
|---|
| [1136] | 1601 | break; | 
|---|
|  | 1602 | case 'L': | 
|---|
|  | 1603 | int ilog; | 
|---|
| [1143] | 1604 | fits_read_key(fileptr,TLOGICAL,keyname,&ilog,comment,&status); | 
|---|
| [1136] | 1605 | dvl[keyname]= (int_4) ilog; | 
|---|
| [1143] | 1606 | dvl.SetComment(keyname, comment); | 
|---|
| [1136] | 1607 | break; | 
|---|
|  | 1608 | case 'F': | 
|---|
|  | 1609 | double dval; | 
|---|
| [1143] | 1610 | fits_read_key(fileptr,TDOUBLE,keyname,&dval,comment,&status); | 
|---|
| [1136] | 1611 | dvl[keyname]= dval; | 
|---|
| [1143] | 1612 | dvl.SetComment(keyname, comment); | 
|---|
| [1136] | 1613 | break; | 
|---|
|  | 1614 | } | 
|---|
|  | 1615 |  | 
|---|
|  | 1616 | } | 
|---|
| [839] | 1617 | } | 
|---|
| [1978] | 1618 | //    dvl.Print(); | 
|---|
| [1136] | 1619 | } | 
|---|
|  | 1620 |  | 
|---|
| [1218] | 1621 |  | 
|---|
|  | 1622 | /*! | 
|---|
|  | 1623 | \class SOPHYA::FitsOutFile | 
|---|
| [1371] | 1624 | \ingroup FitsIOServer | 
|---|
| [1218] | 1625 | Class for loading  SOPHYA objects from FITS Format Files (uses cfitsio lib) | 
|---|
|  | 1626 | */ | 
|---|
|  | 1627 |  | 
|---|
| [1136] | 1628 | FitsOutFile::FitsOutFile() | 
|---|
| [2860] | 1629 | : FitsFile() | 
|---|
| [1136] | 1630 | { | 
|---|
| [1193] | 1631 | InitNull(); | 
|---|
| [903] | 1632 | } | 
|---|
| [839] | 1633 |  | 
|---|
| [1218] | 1634 | /*! \fn SOPHYA::FitsOutFile::FitsOutFile(char flnm[], WriteMode wrm) | 
|---|
|  | 1635 |  | 
|---|
|  | 1636 | \param <WriteMode>  enum , WriteMode = clear -> if alreadyy exists, the file will be overwritten (else created) ; WriteMode = append -> further objects will be appended to the file if it exists (else : file created). WriteMode = unknown -> file created if does not exist, else : exception. (the last situation is the default) | 
|---|
|  | 1637 |  | 
|---|
|  | 1638 | */ | 
|---|
| [1231] | 1639 |  | 
|---|
|  | 1640 | FitsOutFile::FitsOutFile(string const & flnm, WriteMode wrm) | 
|---|
| [2860] | 1641 | : FitsFile() | 
|---|
| [1136] | 1642 | { | 
|---|
| [1231] | 1643 | InitNull(); | 
|---|
|  | 1644 | openoutputfitsfile(flnm.c_str(), wrm); | 
|---|
|  | 1645 | } | 
|---|
| [839] | 1646 |  | 
|---|
| [1231] | 1647 | FitsOutFile::FitsOutFile(const char * flnm, WriteMode wrm) | 
|---|
| [2860] | 1648 | : FitsFile() | 
|---|
| [1231] | 1649 | { | 
|---|
| [1136] | 1650 | InitNull(); | 
|---|
| [1231] | 1651 | openoutputfitsfile(flnm, wrm); | 
|---|
|  | 1652 | } | 
|---|
|  | 1653 |  | 
|---|
| [2860] | 1654 | FitsOutFile::FitsOutFile(FitsInOutFile const& fios) | 
|---|
|  | 1655 | : FitsFile(fios) | 
|---|
|  | 1656 | { | 
|---|
|  | 1657 | InitNull(); | 
|---|
|  | 1658 | if (mode_ == Fits_RO) | 
|---|
|  | 1659 | throw FitsIOException("FitsOutFile::FitsOutFile(FitsInOutFile const& ) ReadOnly Fits file"); | 
|---|
|  | 1660 | } | 
|---|
|  | 1661 |  | 
|---|
|  | 1662 | FitsOutFile::~FitsOutFile() | 
|---|
|  | 1663 | { | 
|---|
|  | 1664 | if (dvlToPrimary_ != NULL) delete dvlToPrimary_; | 
|---|
|  | 1665 | } | 
|---|
|  | 1666 |  | 
|---|
| [1231] | 1667 | void FitsOutFile::openoutputfitsfile(const char * flnm, WriteMode wrm) | 
|---|
|  | 1668 | { | 
|---|
| [1136] | 1669 | int status = 0; | 
|---|
| [839] | 1670 |  | 
|---|
| [1136] | 1671 | // create new FITS file | 
|---|
| [1183] | 1672 | fits_create_file(&fptr_,flnm,&status); | 
|---|
| [2860] | 1673 | if( status )    { | 
|---|
|  | 1674 | switch (wrm) { | 
|---|
|  | 1675 | // si on veut ecrire a la fin de ce fichier | 
|---|
|  | 1676 | case append : | 
|---|
|  | 1677 | status = 0; | 
|---|
|  | 1678 | fits_clear_errmsg(); | 
|---|
|  | 1679 | fits_open_file(&fptr_,flnm,READWRITE,&status); | 
|---|
|  | 1680 | if( status ) { | 
|---|
|  | 1681 | cout << " error opening file: " << flnm << endl; | 
|---|
|  | 1682 | printerror(status, "failure opening a file supposed to exist"); | 
|---|
|  | 1683 | } | 
|---|
|  | 1684 | else cout << " file " << flnm << " opened, new objects will be appended " << endl; | 
|---|
|  | 1685 | fits_get_num_hdus(fptr_, &hdunum_, &status); | 
|---|
|  | 1686 | int hdutype; | 
|---|
|  | 1687 | fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status); | 
|---|
|  | 1688 | if( status ) { | 
|---|
|  | 1689 | printerror( status,":FitsFile::WriteF : erreur movabs"); | 
|---|
|  | 1690 | throw FitsIOException("FitsOutFile::openoutputfitsfile()/fits movabs error"); | 
|---|
|  | 1691 | break; | 
|---|
|  | 1692 |  | 
|---|
|  | 1693 | case clear : | 
|---|
| [1193] | 1694 | { | 
|---|
| [1183] | 1695 | status = 0; | 
|---|
| [1235] | 1696 | fits_clear_errmsg(); | 
|---|
| [2860] | 1697 | char* newname = new char[strlen(flnm)+2]; | 
|---|
|  | 1698 | // | 
|---|
|  | 1699 | newname[0] = '!'; | 
|---|
|  | 1700 | newname[1] = '\0'; | 
|---|
|  | 1701 | strcat(newname, flnm); | 
|---|
|  | 1702 | fits_create_file(&fptr_,newname,&status); | 
|---|
|  | 1703 | delete [] newname; | 
|---|
|  | 1704 | if (status) { | 
|---|
|  | 1705 | cout << " error opening file: " << flnm << endl; | 
|---|
|  | 1706 | printerror(status, "unable to open file, supposed to exist"); | 
|---|
|  | 1707 | throw FitsIOException("FitsOutFile::openoutputfitsfile()/fits open Error "); | 
|---|
| [1183] | 1708 | } | 
|---|
| [2860] | 1709 | else  cout << "  WARNING : file " << flnm << " is overwritten " << endl; | 
|---|
| [1193] | 1710 | break; | 
|---|
|  | 1711 | } | 
|---|
| [2860] | 1712 | case unknown : | 
|---|
|  | 1713 | printerror(status, " file seems already to exist"); | 
|---|
|  | 1714 | throw FitsIOException("FitsOutFile::openoutputfitsfile()/fits open Error - existing file"); | 
|---|
|  | 1715 | break; | 
|---|
|  | 1716 | } | 
|---|
| [1136] | 1717 | } | 
|---|
| [2860] | 1718 | } | 
|---|
|  | 1719 | fname_ = flnm; | 
|---|
|  | 1720 | if ( wrm == append ) mode_ = Fits_RW; | 
|---|
|  | 1721 | else mode_ = Fits_Create; | 
|---|
|  | 1722 | ownfptr = true; | 
|---|
| [1136] | 1723 | } | 
|---|
|  | 1724 |  | 
|---|
|  | 1725 |  | 
|---|
|  | 1726 |  | 
|---|
| [1218] | 1727 | /*! \fn void SOPHYA::FitsOutFile::makeHeaderImageOnFits(char type, int nbdim, int* naxisn,  DVList &dvl) | 
|---|
|  | 1728 |  | 
|---|
|  | 1729 | create an IMAGE header on FITS file. | 
|---|
|  | 1730 | \param <type> type of data (see method ColTypeFromFits) | 
|---|
|  | 1731 | \param <nbdim>  number of dimensions : 1D, 2D, 3D etc. = NAXIS | 
|---|
|  | 1732 | \param <naxisn>  array containind sizes of the different dimensions | 
|---|
|  | 1733 | */ | 
|---|
| [1221] | 1734 | void FitsOutFile::makeHeaderImageOnFits(char type, int nbdim, int* naxisn,  DVList* ptr_dvl) | 
|---|
| [1136] | 1735 | { | 
|---|
|  | 1736 | int status = 0; | 
|---|
|  | 1737 | long naxis = nbdim; | 
|---|
|  | 1738 | long* naxes = new long[nbdim]; | 
|---|
| [1246] | 1739 | bool hdunfirst= (hdunum_ == 0); | 
|---|
|  | 1740 | if (hdunfirst) | 
|---|
| [1136] | 1741 | { | 
|---|
| [1143] | 1742 | if (imageOnPrimary_ == false) | 
|---|
|  | 1743 | { | 
|---|
| [1234] | 1744 | hdunum_ = 1; | 
|---|
| [1143] | 1745 | fits_create_img(fptr_,FLOAT_IMG,0,naxes,&status); | 
|---|
| [1246] | 1746 | } | 
|---|
| [1136] | 1747 | } | 
|---|
|  | 1748 | int k; | 
|---|
|  | 1749 | for (k=0; k< nbdim; k++) naxes[k] = (long)naxisn[k]; | 
|---|
|  | 1750 | if (type == 'D') | 
|---|
|  | 1751 | fits_create_img(fptr_,DOUBLE_IMG,naxis,naxes,&status); | 
|---|
|  | 1752 | else | 
|---|
|  | 1753 | if  (type == 'E') | 
|---|
|  | 1754 | fits_create_img(fptr_,FLOAT_IMG,naxis,naxes,&status); | 
|---|
|  | 1755 | else | 
|---|
|  | 1756 | if  (type == 'I') | 
|---|
|  | 1757 | fits_create_img(fptr_,LONG_IMG,naxis,naxes,&status); | 
|---|
|  | 1758 | else | 
|---|
|  | 1759 | { | 
|---|
|  | 1760 | cout << " type of data: " << type << endl; | 
|---|
|  | 1761 | throw PException("FitsFile:::makeHeaderImageOnFits:unprogrammed type of data "); | 
|---|
|  | 1762 | } | 
|---|
| [1353] | 1763 |  | 
|---|
| [1246] | 1764 | // on ajoute eventuellement un dvlist prepare et la doc SOPHYA | 
|---|
| [1136] | 1765 | hdunum_++; | 
|---|
| [1246] | 1766 | if (hdunfirst) | 
|---|
|  | 1767 | { | 
|---|
|  | 1768 | addDVListOnPrimary(); | 
|---|
|  | 1769 | writeSignatureOnFits(1); | 
|---|
|  | 1770 | } | 
|---|
| [1143] | 1771 |  | 
|---|
| [1353] | 1772 | // header format FITS | 
|---|
|  | 1773 |  | 
|---|
|  | 1774 | writeAppendedHeaderOnFits(); | 
|---|
|  | 1775 |  | 
|---|
|  | 1776 | // write supplementary keywords (from SOPHYA) | 
|---|
| [1143] | 1777 | //  dvl.Print(); | 
|---|
| [1221] | 1778 | if (ptr_dvl != NULL) addKeywordsOfDVList(*ptr_dvl); | 
|---|
| [1143] | 1779 |  | 
|---|
| [1136] | 1780 | delete [] naxes; | 
|---|
|  | 1781 | if( status ) printerror( status, "erreur creation HDU IMAGE"  ); | 
|---|
|  | 1782 |  | 
|---|
|  | 1783 | } | 
|---|
| [1218] | 1784 |  | 
|---|
|  | 1785 |  | 
|---|
|  | 1786 | /*! \fn void SOPHYA::FitsOutFile::PutImageToFits(int nbData, double* map) const | 
|---|
|  | 1787 |  | 
|---|
|  | 1788 | write double data from array 'map'on an IMAGE extension | 
|---|
|  | 1789 | \param <nbData>  number of data to be written | 
|---|
|  | 1790 | */ | 
|---|
| [1379] | 1791 | void FitsOutFile::PutImageToFits(int nbData, r_8* map) const | 
|---|
| [1136] | 1792 | { | 
|---|
|  | 1793 | int status = 0; | 
|---|
|  | 1794 | long npix= nbData; | 
|---|
|  | 1795 | fits_write_img(fptr_,TDOUBLE,1,npix,map,&status); | 
|---|
| [1209] | 1796 | if( status ) printerror( status, "erreur ecriture PutImageToFits" ); | 
|---|
| [1136] | 1797 | } | 
|---|
|  | 1798 |  | 
|---|
| [1218] | 1799 | /*! \fn void SOPHYA::FitsOutFile::PutImageToFits(int nbData, float* map) const | 
|---|
|  | 1800 |  | 
|---|
|  | 1801 | same as previous method with float data | 
|---|
|  | 1802 | */ | 
|---|
| [1379] | 1803 | void FitsOutFile::PutImageToFits(int nbData, r_4* map) const | 
|---|
| [1136] | 1804 | { | 
|---|
|  | 1805 | int status = 0; | 
|---|
|  | 1806 | long npix= nbData; | 
|---|
|  | 1807 | fits_write_img(fptr_,TFLOAT,1,npix, map,&status); | 
|---|
| [1209] | 1808 | if( status ) printerror( status, "erreur ecriture PutImageToFits" ); | 
|---|
| [1136] | 1809 |  | 
|---|
|  | 1810 | } | 
|---|
| [1218] | 1811 |  | 
|---|
|  | 1812 | /*! \fn void SOPHYA::FitsOutFile::PutImageToFits( int nbData, int* map) const | 
|---|
|  | 1813 |  | 
|---|
|  | 1814 | same as previous method with int data */ | 
|---|
| [1379] | 1815 | void FitsOutFile::PutImageToFits( int nbData, int_4* map) const | 
|---|
| [1136] | 1816 | { | 
|---|
|  | 1817 | int status = 0; | 
|---|
|  | 1818 |  | 
|---|
|  | 1819 | long npix= nbData; | 
|---|
|  | 1820 | fits_write_img(fptr_,TINT,1,npix,map,&status); | 
|---|
| [1209] | 1821 | if( status ) printerror( status, "erreur ecriture PutImageToFits" ); | 
|---|
| [1136] | 1822 | } | 
|---|
|  | 1823 |  | 
|---|
|  | 1824 |  | 
|---|
|  | 1825 |  | 
|---|
| [1218] | 1826 | /*! \fn void SOPHYA::FitsOutFile::makeHeaderBntblOnFits( string fieldType, vector<string> Noms, int nentries, int tfields, DVList &dvl, string extname, vector<int> taille_des_chaines) | 
|---|
|  | 1827 |  | 
|---|
|  | 1828 | create an BINTABLE header on FITS file. | 
|---|
|  | 1829 | \param <fieldType> array conta | 
|---|
|  | 1830 | ining characters denoting types of the different column (see method ColTypeFromFits) | 
|---|
|  | 1831 | \param <Noms>  array of the names of columns | 
|---|
|  | 1832 | \param <nentries>  number of data of each column | 
|---|
|  | 1833 | \param <tfields> number of columns | 
|---|
|  | 1834 | \param <dvl> a SOPHYA DVList containing keywords to be appended | 
|---|
|  | 1835 | \param <extname> keyword EXTNAME for FITS file | 
|---|
|  | 1836 | \param <taille_des_chaines> vector containing the number of characters of  data  for each char* typed column, with order of appearance in 'fieldType' | 
|---|
|  | 1837 | */ | 
|---|
| [1300] | 1838 | void FitsOutFile::makeHeaderBntblOnFits(string fieldType, vector<string> Noms, int nentries, int tfields, DVList* ptr_dvl, string extname, vector<int> taille_des_chaines) | 
|---|
| [839] | 1839 | { | 
|---|
| [1209] | 1840 | int k; | 
|---|
| [839] | 1841 | int status = 0; | 
|---|
|  | 1842 | long nrows; | 
|---|
| [1300] | 1843 | // verifications de coherences | 
|---|
| [1209] | 1844 |  | 
|---|
| [1193] | 1845 | if (fieldType.length() != tfields) | 
|---|
| [839] | 1846 | { | 
|---|
| [1193] | 1847 | cout << " nombre de champs :" << tfields << "nombre de types: " << fieldType.length() << endl; | 
|---|
| [1136] | 1848 | throw ParmError("FitsFile:: fields and types don't match"); | 
|---|
| [839] | 1849 |  | 
|---|
|  | 1850 | } | 
|---|
| [1209] | 1851 | if (tfields >  Noms.size()) | 
|---|
|  | 1852 | { | 
|---|
|  | 1853 | cout << " WARNING: FitsOutFile::makeHeaderBntblOnFits, length of vector of column names not equal to total number of columns" << endl; | 
|---|
|  | 1854 | for (k=0; k<(tfields-Noms.size()); k++) Noms.push_back( string(" ")); | 
|---|
|  | 1855 | } | 
|---|
|  | 1856 |  | 
|---|
|  | 1857 | // nombre de variables "chaines de caracteres" | 
|---|
|  | 1858 | int nbString = 0; | 
|---|
|  | 1859 | for (k=0; k<tfields;k++) if (fieldType[k] == 'A') nbString++; | 
|---|
|  | 1860 | // coherence de la longueur du vecteur des tailles | 
|---|
|  | 1861 | if (nbString >  taille_des_chaines.size()) | 
|---|
|  | 1862 | { | 
|---|
|  | 1863 | cout << " WARNING: FitsOutFile::makeHeaderBntblOnFits, length of vector of string lengths  not equal to total number of columns" << endl; | 
|---|
|  | 1864 | int strSz=0; | 
|---|
|  | 1865 | for (k=0; k<taille_des_chaines.size(); k++) if ( taille_des_chaines[k] > strSz) strSz = taille_des_chaines[k]; | 
|---|
|  | 1866 | for (k=0; k<(nbString-taille_des_chaines.size()); k++) taille_des_chaines.push_back(strSz); | 
|---|
|  | 1867 | } | 
|---|
| [839] | 1868 | char ** ttype= new char*[tfields]; | 
|---|
|  | 1869 | char ** tform= new char*[tfields]; | 
|---|
|  | 1870 | char largeur[FLEN_VALUE]; | 
|---|
|  | 1871 | int noColString=0; | 
|---|
| [971] | 1872 | for (k=0; k<tfields;k++) | 
|---|
| [839] | 1873 | { | 
|---|
|  | 1874 | char  format[FLEN_VALUE]; | 
|---|
|  | 1875 |  | 
|---|
|  | 1876 | if(nentries < 1024) | 
|---|
|  | 1877 | { | 
|---|
|  | 1878 | nrows= nentries; | 
|---|
|  | 1879 | if (fieldType[k] == 'A') | 
|---|
|  | 1880 | { | 
|---|
|  | 1881 | sprintf(largeur,"%d",taille_des_chaines[noColString++]); | 
|---|
|  | 1882 | strcpy(format,largeur); | 
|---|
|  | 1883 | } | 
|---|
|  | 1884 | else strcpy(format,"1"); | 
|---|
|  | 1885 | } | 
|---|
|  | 1886 | else | 
|---|
|  | 1887 | { | 
|---|
|  | 1888 | nrows = nentries/1024; | 
|---|
|  | 1889 | if(nentries%1024 != 0) nrows++; | 
|---|
|  | 1890 | if (fieldType[k] == 'A') | 
|---|
|  | 1891 | { | 
|---|
| [1136] | 1892 | char largaux[FLEN_VALUE]; | 
|---|
|  | 1893 | sprintf(largeur,"%d",taille_des_chaines[noColString]); | 
|---|
|  | 1894 | sprintf(largaux,"%d",1024*taille_des_chaines[noColString]); | 
|---|
|  | 1895 | noColString++; | 
|---|
|  | 1896 | strcpy(format, largaux); | 
|---|
| [839] | 1897 | } | 
|---|
|  | 1898 | else strcpy(format,"1024"); | 
|---|
|  | 1899 | } | 
|---|
|  | 1900 | strncat(format,&fieldType[k],1); | 
|---|
|  | 1901 | if (fieldType[k] == 'A') | 
|---|
|  | 1902 | { | 
|---|
|  | 1903 | strcat(format,largeur); | 
|---|
|  | 1904 | } | 
|---|
| [1193] | 1905 | ttype[k] =  const_cast<char*>(Noms[k].c_str()); | 
|---|
| [839] | 1906 | tform[k]= new char[FLEN_VALUE]; | 
|---|
|  | 1907 | strcpy(tform[k],format); | 
|---|
|  | 1908 | } | 
|---|
| [1193] | 1909 | char* extn = const_cast<char*>(extname.c_str()); | 
|---|
| [839] | 1910 |  | 
|---|
|  | 1911 | // create a new empty binary table onto the FITS file | 
|---|
|  | 1912 | // physical units if they exist, are defined in the DVList object | 
|---|
|  | 1913 | // so the NULL pointer is given for the tunit parameters. | 
|---|
|  | 1914 | nrows=0; | 
|---|
|  | 1915 | fits_create_tbl(fptr_,BINARY_TBL,nrows,tfields,ttype,tform, | 
|---|
|  | 1916 | NULL,extn,&status); | 
|---|
|  | 1917 | if( status ) printerror( status ); | 
|---|
| [1353] | 1918 |  | 
|---|
|  | 1919 | int ii; | 
|---|
|  | 1920 | for(ii = 0; ii < tfields; ii++) | 
|---|
|  | 1921 | { | 
|---|
|  | 1922 | delete [] tform[ii]; | 
|---|
|  | 1923 | } | 
|---|
|  | 1924 | delete [] ttype; | 
|---|
|  | 1925 | delete [] tform; | 
|---|
|  | 1926 |  | 
|---|
|  | 1927 | // on ajoute eventuellement des mots-cles | 
|---|
|  | 1928 |  | 
|---|
| [1246] | 1929 | if ( hdunum_ == 0 ) | 
|---|
|  | 1930 | { | 
|---|
|  | 1931 | hdunum_ = 2; | 
|---|
|  | 1932 | addDVListOnPrimary(); | 
|---|
|  | 1933 | writeSignatureOnFits(1); | 
|---|
|  | 1934 | } | 
|---|
| [1026] | 1935 | else  hdunum_++; | 
|---|
| [1353] | 1936 |  | 
|---|
|  | 1937 | // header format FITS | 
|---|
|  | 1938 |  | 
|---|
|  | 1939 | writeAppendedHeaderOnFits(); | 
|---|
|  | 1940 |  | 
|---|
|  | 1941 | // write SOPHYA keywords | 
|---|
| [1221] | 1942 | if (ptr_dvl != NULL) addKeywordsOfDVList(*ptr_dvl); | 
|---|
| [839] | 1943 | } | 
|---|
|  | 1944 |  | 
|---|
| [1353] | 1945 |  | 
|---|
|  | 1946 |  | 
|---|
| [1218] | 1947 | /*! \fn void SOPHYA::FitsOutFile::PutColToFits(int nocol, int nentries, double* donnees) const | 
|---|
|  | 1948 |  | 
|---|
|  | 1949 | write double data from array 'donnees ' on column number 'nocol' of a BINTABLE  extension. | 
|---|
|  | 1950 | \param <nentries>  number of data to be written | 
|---|
|  | 1951 | */ | 
|---|
| [1353] | 1952 |  | 
|---|
| [1379] | 1953 | void FitsOutFile::PutColToFits(int nocol, int nentries, r_8* donnees) const | 
|---|
| [839] | 1954 | { | 
|---|
|  | 1955 | int status = 0; | 
|---|
| [971] | 1956 | int hdutype; | 
|---|
| [839] | 1957 | fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status); | 
|---|
| [1209] | 1958 | if( status ) printerror(status,"PutColToFits: le movabs a foire"); | 
|---|
| [839] | 1959 | fits_get_hdu_type(fptr_, &hdutype, &status); | 
|---|
| [867] | 1960 | if(hdutype != ASCII_TBL && hdutype != BINARY_TBL) | 
|---|
|  | 1961 | { | 
|---|
|  | 1962 | cout << " hdunum= " << hdunum_ << " hdutype= " << hdutype << endl; | 
|---|
| [1209] | 1963 | throw IOExc("FitsFile::PutColToFits, this HDU is not an ASCII table nor a binary table"); | 
|---|
| [867] | 1964 | } | 
|---|
| [839] | 1965 | int code; | 
|---|
|  | 1966 | long repeat, width; | 
|---|
|  | 1967 | fits_get_coltype(fptr_, nocol+1, &code, &repeat,&width, &status); | 
|---|
|  | 1968 | if( code != TDOUBLE) | 
|---|
|  | 1969 | { | 
|---|
| [1209] | 1970 | cout << " WARNING : types don't match (PutColToFits) : on fits file= " << code << " to be written= DOUBLE " << endl; | 
|---|
| [839] | 1971 | } | 
|---|
| [1499] | 1972 | //  cout << " 10 elements de colonne " << endl; | 
|---|
|  | 1973 | //  for (int toto=0; toto < 10; toto++) cout << donnees[toto] << endl; | 
|---|
| [839] | 1974 | fits_write_col(fptr_,TDOUBLE,nocol+1,1,1,nentries, donnees ,&status); | 
|---|
| [1752] | 1975 | if( status )  printerror( status,"erreur ecriture col. double, dans fichier fits" ); | 
|---|
| [839] | 1976 | } | 
|---|
| [1218] | 1977 |  | 
|---|
|  | 1978 |  | 
|---|
|  | 1979 |  | 
|---|
|  | 1980 | /*! \fn void SOPHYA::FitsOutFile::PutColToFits(int nocol, int nentries, float* donnees) const | 
|---|
|  | 1981 |  | 
|---|
|  | 1982 | same as previous method with float data | 
|---|
|  | 1983 | */ | 
|---|
| [1379] | 1984 | void FitsOutFile::PutColToFits(int nocol, int nentries, r_4* donnees) const | 
|---|
| [839] | 1985 | { | 
|---|
|  | 1986 | int status = 0; | 
|---|
|  | 1987 | int hdutype; | 
|---|
|  | 1988 | fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status); | 
|---|
| [1209] | 1989 | if( status ) printerror(status,"PutColToFits: le movabs a foire"); | 
|---|
| [839] | 1990 | fits_get_hdu_type(fptr_, &hdutype, &status); | 
|---|
|  | 1991 | if(hdutype != ASCII_TBL && hdutype != BINARY_TBL) | 
|---|
|  | 1992 | { | 
|---|
|  | 1993 | cout << " hdunum= " << hdunum_ << " hdutype= " << hdutype << endl; | 
|---|
| [1209] | 1994 | throw IOExc("FitsFile::PutColToFits, this HDU is not an ASCII table nor a binary table"); | 
|---|
| [839] | 1995 | } | 
|---|
|  | 1996 | if(hdutype == ASCII_TBL && nocol>0) | 
|---|
|  | 1997 | { | 
|---|
| [1209] | 1998 | throw IOExc("FitsFile::PutColToFits, this HDU is an ASCII table, nocol>0  forbidden"); | 
|---|
| [839] | 1999 | } | 
|---|
|  | 2000 | int code; | 
|---|
|  | 2001 | long repeat, width; | 
|---|
|  | 2002 | fits_get_coltype(fptr_, nocol+1, &code, &repeat,&width, &status); | 
|---|
|  | 2003 | if( code != TFLOAT) | 
|---|
|  | 2004 | { | 
|---|
| [1209] | 2005 | cout << " WARNING : types don't match (PutColToFits) : on fits file= " << code << " (FITS code), to be written= FLOAT " << endl; | 
|---|
| [839] | 2006 | } | 
|---|
|  | 2007 | fits_write_col(fptr_,TFLOAT,nocol+1,1,1,nentries, donnees ,&status); | 
|---|
| [1752] | 2008 | if( status )  printerror( status,"erreur ecriture col. floats, dans fichier fits" ); | 
|---|
| [839] | 2009 | } | 
|---|
| [1218] | 2010 |  | 
|---|
|  | 2011 |  | 
|---|
|  | 2012 | /*! \fn void FitsOutFile::PutColToFits(int nocol, int nentries, int* donnees) const | 
|---|
|  | 2013 |  | 
|---|
|  | 2014 | same as previous method with int data | 
|---|
|  | 2015 | */ | 
|---|
| [1379] | 2016 | void FitsOutFile::PutColToFits(int nocol, int nentries, int_4* donnees) const | 
|---|
| [839] | 2017 | { | 
|---|
|  | 2018 | int status = 0; | 
|---|
|  | 2019 | int hdutype; | 
|---|
|  | 2020 | fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status); | 
|---|
| [1209] | 2021 | if( status ) printerror(status,"PutColToFits: le movabs a foire"); | 
|---|
| [839] | 2022 | fits_get_hdu_type(fptr_, &hdutype, &status); | 
|---|
|  | 2023 | if(hdutype != ASCII_TBL && hdutype != BINARY_TBL) | 
|---|
|  | 2024 | { | 
|---|
|  | 2025 | cout << " hdunum= " << hdunum_ << " hdutype= " << hdutype << endl; | 
|---|
| [1209] | 2026 | throw IOExc("FitsFile::PutColToFits, this HDU is not an ASCII table nor a binary table"); | 
|---|
| [839] | 2027 | } | 
|---|
|  | 2028 | if(hdutype == ASCII_TBL && nocol>0) | 
|---|
|  | 2029 | { | 
|---|
| [1209] | 2030 | throw IOExc("FitsFile::PutColToFits, this HDU is an ASCII table, nocol>0  forbidden"); | 
|---|
| [839] | 2031 | } | 
|---|
|  | 2032 | int code; | 
|---|
|  | 2033 | long repeat, width; | 
|---|
|  | 2034 | fits_get_coltype(fptr_, nocol+1, &code, &repeat,&width, &status); | 
|---|
| [1752] | 2035 |  | 
|---|
|  | 2036 |  | 
|---|
| [2197] | 2037 |  | 
|---|
|  | 2038 | if (code == TINT || code == TLONG) | 
|---|
| [839] | 2039 | { | 
|---|
| [2197] | 2040 | // cfitsio n'a que des entiers de longueur inferieure a 32 bits. | 
|---|
|  | 2041 | // ici, a l'ecriture TLONG impliquerait que le tableau de donnees | 
|---|
|  | 2042 | // soit un tableau int_8. Donc c'est toujours TINT qu;il faut mettre | 
|---|
|  | 2043 | // De plus, j'ai l'impression que TINT va devenir obsolete dans cfitsio | 
|---|
|  | 2044 | // (GLM) | 
|---|
| [1752] | 2045 | fits_write_col(fptr_,TINT,nocol+1,1,1,nentries, donnees ,&status); | 
|---|
|  | 2046 | } | 
|---|
|  | 2047 | else | 
|---|
|  | 2048 | { | 
|---|
|  | 2049 | cout << " WARNING : types don't match (PutColToFits) : on fits file= " << code << " (FITS code), to be written= integers " << endl; | 
|---|
| [839] | 2050 | } | 
|---|
| [1752] | 2051 | if( status )  printerror( status,"erreur ecriture col. entiers, dans fichier fits" ); | 
|---|
| [839] | 2052 | } | 
|---|
| [1218] | 2053 |  | 
|---|
|  | 2054 |  | 
|---|
|  | 2055 | /*! \fn void SOPHYA::FitsOutFile::PutColToFits(int nocol, int nentries, char** donnees) const | 
|---|
|  | 2056 | same as previous method with char* data | 
|---|
|  | 2057 | */ | 
|---|
| [1209] | 2058 | void FitsOutFile::PutColToFits(int nocol, int nentries, char** donnees) const | 
|---|
| [839] | 2059 | { | 
|---|
|  | 2060 | int status = 0; | 
|---|
|  | 2061 | int hdutype; | 
|---|
|  | 2062 | fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status); | 
|---|
| [1209] | 2063 | if( status ) printerror(status,"PutColToFits: le movabs a foire"); | 
|---|
| [839] | 2064 | fits_get_hdu_type(fptr_, &hdutype, &status); | 
|---|
|  | 2065 | if(hdutype != ASCII_TBL && hdutype != BINARY_TBL) | 
|---|
|  | 2066 | { | 
|---|
|  | 2067 | cout << " hdunum= " << hdunum_ << " hdutype= " << hdutype << endl; | 
|---|
| [1209] | 2068 | throw IOExc("FitsFile::PutColToFits, this HDU is not an ASCII table nor a binary table"); | 
|---|
| [839] | 2069 | } | 
|---|
|  | 2070 | if(hdutype == ASCII_TBL && nocol>0) | 
|---|
|  | 2071 | { | 
|---|
| [1209] | 2072 | throw IOExc("FitsFile::PutColToFits, this HDU is an ASCII table, nocol>0  forbidden"); | 
|---|
| [839] | 2073 | } | 
|---|
|  | 2074 | int code; | 
|---|
|  | 2075 | long repeat, width; | 
|---|
|  | 2076 | fits_get_coltype(fptr_, nocol+1, &code, &repeat,&width, &status); | 
|---|
|  | 2077 | if( code != TSTRING) | 
|---|
|  | 2078 | { | 
|---|
| [1209] | 2079 | cout << " WARNING : types don't match (PutColToFits) : on fits file= " << code << " (FITS code), to be written= char** " << endl; | 
|---|
| [839] | 2080 | } | 
|---|
|  | 2081 | fits_write_col(fptr_,TSTRING,nocol+1,1,1,nentries, donnees ,&status); | 
|---|
| [1752] | 2082 | if( status )  printerror( status,"erreur ecriture col. chars, dans fichier fits" ); | 
|---|
| [839] | 2083 | } | 
|---|
|  | 2084 |  | 
|---|
| [1209] | 2085 | void FitsOutFile::PutBinTabLine(long NoLine,  BnTblLine& ligne) const | 
|---|
| [1193] | 2086 | { | 
|---|
| [1209] | 2087 | // on ne fait pas de verification de type, ni de dimension ici, pour | 
|---|
|  | 2088 | // des raisons de performances | 
|---|
|  | 2089 | int k; | 
|---|
| [1193] | 2090 | int status= 0; | 
|---|
| [1978] | 2091 | int    anynul; | 
|---|
| [1209] | 2092 | int ncol=0; | 
|---|
| [1193] | 2093 | long nels=1; | 
|---|
| [1209] | 2094 | //  int nbcols; | 
|---|
|  | 2095 | //  fits_get_num_cols(fptr_, &nbcols,&status); | 
|---|
|  | 2096 | for (k=0; k<ligne.ddata_.size(); k++, ncol++) | 
|---|
| [1193] | 2097 | { | 
|---|
| [1209] | 2098 | fits_write_col(fptr_,TDOUBLE,ncol+1,NoLine+1,1,1, &ligne.ddata_[k] ,&status); | 
|---|
|  | 2099 | if( status ) printerror( status, "PutBinTabLine : erreur ecriture double"  ); | 
|---|
| [1193] | 2100 | } | 
|---|
| [1209] | 2101 | for (k=0; k<ligne.fdata_.size(); k++, ncol++) | 
|---|
|  | 2102 | { | 
|---|
|  | 2103 | fits_write_col(fptr_,TFLOAT,ncol+1,NoLine+1,1,1, &ligne.fdata_[k] ,&status); | 
|---|
|  | 2104 | if( status ) printerror( status, "PutBinTabLine : erreur ecriture float"  ); | 
|---|
|  | 2105 | } | 
|---|
|  | 2106 | for (k=0; k<ligne.idata_.size(); k++, ncol++) | 
|---|
|  | 2107 | { | 
|---|
|  | 2108 | fits_write_col(fptr_,TINT,ncol+1,NoLine+1,1,1, &ligne.idata_[k] ,&status); | 
|---|
|  | 2109 | if( status ) printerror( status, "PutBinTabLine : erreur ecriture entier"  ); | 
|---|
|  | 2110 | } | 
|---|
| [1359] | 2111 | for (k=0; k<ligne.ldata_.size(); k++, ncol++) | 
|---|
|  | 2112 | { | 
|---|
|  | 2113 | fits_write_col(fptr_,TLONG,ncol+1,NoLine+1,1,1, &ligne.ldata_[k] ,&status); | 
|---|
|  | 2114 | if( status ) printerror( status, "PutBinTabLine : erreur ecriture entier long"  ); | 
|---|
|  | 2115 | } | 
|---|
|  | 2116 | for (k=0; k<ligne.bdata_.size(); k++, ncol++) | 
|---|
|  | 2117 | { | 
|---|
|  | 2118 | fits_write_col(fptr_,TBYTE,ncol+1,NoLine+1,1,1, &ligne.bdata_[k] ,&status); | 
|---|
|  | 2119 | if( status ) printerror( status, "PutBinTabLine : erreur ecriture byte"  ); | 
|---|
|  | 2120 | } | 
|---|
| [1209] | 2121 |  | 
|---|
|  | 2122 | for (k=0; k<ligne.cdata_.size(); k++, ncol++) | 
|---|
|  | 2123 | { | 
|---|
| [1220] | 2124 | fits_write_col(fptr_,TSTRING,ncol+1,NoLine+1,1,1, (void*)ligne.cdata_[k].c_str() ,&status); | 
|---|
| [1209] | 2125 | if( status ) printerror( status, "PutBinTabLine : erreur ecriture caracteres"  ); | 
|---|
|  | 2126 | } | 
|---|
| [1193] | 2127 | } | 
|---|
|  | 2128 |  | 
|---|
|  | 2129 |  | 
|---|
| [1218] | 2130 | /* \fn void  SOPHYA::FitsOutFile::DVListIntoPrimaryHeader(DVList& dvl) const | 
|---|
|  | 2131 |  | 
|---|
|  | 2132 | Put keywords from a DVList into the primary header of the fits-file | 
|---|
|  | 2133 | */ | 
|---|
| [1246] | 2134 | void  FitsOutFile::DVListIntoPrimaryHeader(DVList& dvl) | 
|---|
| [1143] | 2135 | { | 
|---|
|  | 2136 | int status = 0; | 
|---|
|  | 2137 | int hdutype; | 
|---|
| [1246] | 2138 | if (hdunum_ == 0) | 
|---|
|  | 2139 | { | 
|---|
|  | 2140 | if (dvlToPrimary_ == NULL) dvlToPrimary_ = new DVList(dvl); | 
|---|
|  | 2141 | else dvlToPrimary_->Merge(dvl); | 
|---|
|  | 2142 | } | 
|---|
|  | 2143 | else | 
|---|
|  | 2144 | { | 
|---|
|  | 2145 | fits_movabs_hdu(fptr_,1,&hdutype,&status); | 
|---|
|  | 2146 | addKeywordsOfDVList(dvl); | 
|---|
|  | 2147 | fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status); | 
|---|
|  | 2148 | } | 
|---|
| [1143] | 2149 | } | 
|---|
| [839] | 2150 |  | 
|---|
| [1143] | 2151 |  | 
|---|
| [1246] | 2152 | void FitsOutFile::writeSignatureOnFits(int hdunum) const | 
|---|
| [839] | 2153 | { | 
|---|
|  | 2154 | int status = 0; | 
|---|
| [1246] | 2155 | int hdutype; | 
|---|
| [839] | 2156 | char keyname[LEN_KEYWORD]; | 
|---|
|  | 2157 | char strval[FLEN_VALUE]; | 
|---|
|  | 2158 | char comment[FLEN_COMMENT]; | 
|---|
| [1246] | 2159 | if (hdunum_ == 0) | 
|---|
|  | 2160 | { | 
|---|
|  | 2161 | cerr << " WARNING : can't write keywords on non existing primary header" << endl; | 
|---|
|  | 2162 | return; | 
|---|
|  | 2163 | } | 
|---|
|  | 2164 | fits_movabs_hdu(fptr_,1,&hdutype,&status); | 
|---|
|  | 2165 | // | 
|---|
| [971] | 2166 | strncpy(keyname, "CREATOR", LEN_KEYWORD); | 
|---|
| [1418] | 2167 | keyname[7] = '\0'; | 
|---|
| [971] | 2168 | strcpy(strval, "SOPHYA"); | 
|---|
|  | 2169 | strcpy(comment," SOPHYA Package - FITSIOServer "); | 
|---|
|  | 2170 | fits_write_key(fptr_, TSTRING, keyname, &strval, comment, &status); | 
|---|
|  | 2171 | if( status ) printerror( status ); | 
|---|
| [1143] | 2172 | fits_write_date(fptr_, &status); | 
|---|
| [971] | 2173 | fits_write_comment(fptr_,"..............................................", &status); | 
|---|
|  | 2174 | fits_write_comment(fptr_, " SOPHYA package - FITSIOSever ", &status); | 
|---|
|  | 2175 | fits_write_comment(fptr_, " (C) LAL/IN2P3-CNRS Orsay,  FRANCE 2000", &status); | 
|---|
|  | 2176 | fits_write_comment(fptr_, " (C) DAPNIA/CEA     Saclay, FRANCE 2000", &status); | 
|---|
|  | 2177 | fits_write_comment(fptr_,"..............................................", &status); | 
|---|
| [1045] | 2178 | if( status ) printerror( status, "erreur writeSignatureOnFits"  ); | 
|---|
| [1246] | 2179 | // | 
|---|
|  | 2180 | fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status); | 
|---|
| [839] | 2181 | } | 
|---|
|  | 2182 |  | 
|---|
| [903] | 2183 |  | 
|---|
| [1246] | 2184 | void FitsOutFile::addKeywordsOfDVList( DVList& dvl) const | 
|---|
| [1143] | 2185 | { | 
|---|
|  | 2186 | int status = 0; | 
|---|
|  | 2187 | fits_write_comment(fptr_,"---------- keywords from SOPHYA ---------", &status); | 
|---|
|  | 2188 | DVList::ValList::const_iterator it; | 
|---|
|  | 2189 | for(it = dvl.Begin(); it != dvl.End(); it++) | 
|---|
|  | 2190 | { | 
|---|
| [1311] | 2191 | MuTyV::MTVType keytype= (*it).second.elval.Type(); | 
|---|
| [1418] | 2192 | char keyname[LEN_KEYWORD]; | 
|---|
|  | 2193 | strncpy(keyname,(*it).first.substr(0,64).c_str(),LEN_KEYWORD); | 
|---|
|  | 2194 | int bout = ((*it).first.substr(0,64).length() < LEN_KEYWORD) ? (*it).first.substr(0,64).length() : LEN_KEYWORD-1; | 
|---|
|  | 2195 | keyname[bout] = '\0'; | 
|---|
|  | 2196 | string key((*it).first.substr(0,64)); | 
|---|
|  | 2197 | //      string key(keyname); | 
|---|
| [1143] | 2198 | char comment[FLEN_COMMENT]; | 
|---|
|  | 2199 | char strval[FLEN_VALUE]= ""; | 
|---|
|  | 2200 | char *comkey = "COMMENT"; | 
|---|
| [1353] | 2201 | //      fits_read_keyword(fptr_, keyname, strval, NULL, &status); | 
|---|
|  | 2202 | //  if (status != 0 || strncmp(keyname,comkey,LEN_KEYWORD-1) == 0 ) | 
|---|
| [1143] | 2203 | { | 
|---|
| [1183] | 2204 | string coco = dvl.GetComment(key); | 
|---|
|  | 2205 | coco.copy( comment, FLEN_COMMENT-1); | 
|---|
|  | 2206 | int bout = (coco.length() < FLEN_COMMENT) ? coco.length() : FLEN_COMMENT-1; | 
|---|
|  | 2207 | comment[bout]= '\0'; | 
|---|
| [1143] | 2208 | status = 0; | 
|---|
|  | 2209 | switch (keytype) | 
|---|
|  | 2210 | { | 
|---|
| [1311] | 2211 | case MuTyV::MTVInteger : | 
|---|
| [1143] | 2212 | { | 
|---|
| [1183] | 2213 | int ival = (int)dvl.GetI(key); | 
|---|
|  | 2214 | fits_write_key(fptr_,TINT,keyname,&ival, comment,&status); | 
|---|
| [1143] | 2215 | break; | 
|---|
|  | 2216 | } | 
|---|
| [1311] | 2217 | case MuTyV::MTVFloat : | 
|---|
| [1143] | 2218 | { | 
|---|
| [1183] | 2219 | double dval= (double)dvl.GetD(key); | 
|---|
| [1143] | 2220 | fits_write_key(fptr_,TDOUBLE,keyname,&dval,comment,&status); | 
|---|
|  | 2221 | break; | 
|---|
|  | 2222 | } | 
|---|
| [1311] | 2223 | case MuTyV::MTVString : | 
|---|
| [1143] | 2224 | { | 
|---|
| [1183] | 2225 | char strvaleur[FLEN_VALUE]= ""; | 
|---|
|  | 2226 | string valChaine = dvl.GetS(key); | 
|---|
|  | 2227 | valChaine.copy(strvaleur, FLEN_VALUE-1); | 
|---|
|  | 2228 | int fin =  (valChaine.length() < FLEN_VALUE) ? valChaine.length() : FLEN_VALUE-1; | 
|---|
|  | 2229 | strvaleur[fin]= '\0'; | 
|---|
|  | 2230 |  | 
|---|
|  | 2231 | fits_write_key(fptr_,TSTRING,keyname,&strvaleur,comment,&status); | 
|---|
| [1143] | 2232 | break; | 
|---|
|  | 2233 | } | 
|---|
|  | 2234 | } | 
|---|
|  | 2235 | } | 
|---|
|  | 2236 | if( status )  printerror( status,"fitsfile: probleme ecriture mot-cle du dvlist" ); | 
|---|
|  | 2237 | } | 
|---|
|  | 2238 | fits_write_comment(fptr_,"--------------------------------------", &status); | 
|---|
|  | 2239 | } | 
|---|
| [903] | 2240 |  | 
|---|
|  | 2241 |  | 
|---|
| [1246] | 2242 | void FitsOutFile::addDVListOnPrimary() | 
|---|
|  | 2243 | { | 
|---|
|  | 2244 | int status = 0; | 
|---|
|  | 2245 | int hdutype; | 
|---|
|  | 2246 | if (hdunum_ == 0) | 
|---|
|  | 2247 | { | 
|---|
|  | 2248 | cerr << " WARNING : can't write keywords on non existing primary header" << endl; | 
|---|
|  | 2249 | return; | 
|---|
|  | 2250 | } | 
|---|
|  | 2251 | if (dvlToPrimary_ != NULL) | 
|---|
|  | 2252 | { | 
|---|
|  | 2253 | fits_movabs_hdu(fptr_,1,&hdutype,&status); | 
|---|
|  | 2254 | addKeywordsOfDVList(*dvlToPrimary_); | 
|---|
|  | 2255 | delete dvlToPrimary_; | 
|---|
|  | 2256 | dvlToPrimary_ = NULL; | 
|---|
|  | 2257 | fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status); | 
|---|
|  | 2258 | } | 
|---|
|  | 2259 | } | 
|---|
| [839] | 2260 |  | 
|---|
| [1353] | 2261 |  | 
|---|
|  | 2262 | /*! \fn void  FitsOutFile::appendInHeader(FitsInFile& infits, int hdunum) | 
|---|
|  | 2263 |  | 
|---|
|  | 2264 | get a header from FitsInFile and append to the header beeing built | 
|---|
|  | 2265 | (shifting mandatory keywords) | 
|---|
|  | 2266 | */ | 
|---|
|  | 2267 |  | 
|---|
|  | 2268 | void FitsOutFile::appendInputHeader(FitsInFile& infits, int hdunum) | 
|---|
|  | 2269 | { | 
|---|
| [1771] | 2270 |  | 
|---|
|  | 2271 | infits.GetKeywordsFromHeader(hdunum, mots_cles_); | 
|---|
|  | 2272 | /* | 
|---|
| [1353] | 2273 | int status = 0; | 
|---|
|  | 2274 | int hdutype; | 
|---|
|  | 2275 | fitsfile* fptr=infits.fitsfilePtr(); | 
|---|
|  | 2276 | fits_movabs_hdu(fptr,hdunum,&hdutype,&status); | 
|---|
|  | 2277 | if( status ) fits_report_error(stderr,status); | 
|---|
|  | 2278 |  | 
|---|
|  | 2279 | // get number of keywords | 
|---|
|  | 2280 | int nkeys,keypos; | 
|---|
|  | 2281 | fits_get_hdrpos(fptr,&nkeys,&keypos,&status); | 
|---|
|  | 2282 | if( status ) fits_report_error(stderr,status); | 
|---|
|  | 2283 | // shift with the number of mandatory keywords | 
|---|
|  | 2284 | int num= 0; | 
|---|
|  | 2285 | // if primary header | 
|---|
|  | 2286 | if (hdunum == 1) | 
|---|
|  | 2287 | { | 
|---|
|  | 2288 | // read NAXIS | 
|---|
|  | 2289 | int naxis=0; | 
|---|
|  | 2290 | fits_read_key(fptr,TINT,"NAXIS",&naxis,NULL,&status); | 
|---|
|  | 2291 | // number of mandatory keywords | 
|---|
|  | 2292 | num = naxis+3; | 
|---|
|  | 2293 | } | 
|---|
|  | 2294 | // extensions | 
|---|
|  | 2295 | else | 
|---|
|  | 2296 | { | 
|---|
|  | 2297 | if (hdutype == IMAGE_HDU) | 
|---|
|  | 2298 | { | 
|---|
|  | 2299 | // read NAXIS | 
|---|
|  | 2300 | int naxis=0; | 
|---|
|  | 2301 | fits_read_key(fptr,TINT,"NAXIS",&naxis,NULL,&status); | 
|---|
|  | 2302 | // number of mandatory keywords | 
|---|
|  | 2303 | num = naxis+5; | 
|---|
|  | 2304 | } | 
|---|
|  | 2305 | else | 
|---|
|  | 2306 | if(hdutype == ASCII_TBL || hdutype == BINARY_TBL) | 
|---|
|  | 2307 | { | 
|---|
|  | 2308 | // number of mandatory keywords | 
|---|
|  | 2309 | num = 8; | 
|---|
|  | 2310 | } | 
|---|
|  | 2311 | } | 
|---|
|  | 2312 | int j; | 
|---|
|  | 2313 | char keyname[LEN_KEYWORD]; | 
|---|
|  | 2314 | char value[FLEN_VALUE]; | 
|---|
|  | 2315 | char comment[FLEN_COMMENT]; | 
|---|
|  | 2316 | for(j = num+1; j <= nkeys; j++) | 
|---|
|  | 2317 | { | 
|---|
|  | 2318 | char dtype; | 
|---|
|  | 2319 | fits_read_keyn(fptr,j,keyname,value,comment,&status); | 
|---|
|  | 2320 | if(status) | 
|---|
|  | 2321 | { | 
|---|
|  | 2322 | fits_report_error(stderr,status); | 
|---|
|  | 2323 | status=0; | 
|---|
|  | 2324 | } | 
|---|
|  | 2325 | string  kn(keyname); | 
|---|
|  | 2326 | string  cm(comment); | 
|---|
|  | 2327 | string  val(value); | 
|---|
|  | 2328 | FitsKeyword kw(kn, val, cm); | 
|---|
|  | 2329 | mots_cles_.push_back(kw); | 
|---|
|  | 2330 | } | 
|---|
| [1771] | 2331 | */ | 
|---|
| [1353] | 2332 | } | 
|---|
|  | 2333 | void FitsOutFile::writeAppendedHeaderOnFits() | 
|---|
|  | 2334 | { | 
|---|
|  | 2335 | for (list<FitsKeyword>::iterator it=mots_cles_.begin(); it !=mots_cles_.end(); it++) | 
|---|
|  | 2336 | { | 
|---|
|  | 2337 | (*it).writeOnFits(fptr_); | 
|---|
|  | 2338 | } | 
|---|
|  | 2339 | mots_cles_.clear(); | 
|---|
|  | 2340 | } | 
|---|
|  | 2341 |  | 
|---|
|  | 2342 | void FitsOutFile::insertKeywordOnHeader(string keyname, double value, string comment) | 
|---|
|  | 2343 | { | 
|---|
| [1418] | 2344 | char cvalue[16]; | 
|---|
| [1353] | 2345 | sprintf(cvalue,"%e",value); | 
|---|
| [1418] | 2346 | FitsKeyword kw(keyname, string(cvalue), comment, 'F'); | 
|---|
| [1353] | 2347 | mots_cles_.push_back(kw); | 
|---|
|  | 2348 | } | 
|---|
| [1418] | 2349 | void FitsOutFile::insertKeywordOnHeader(string keyname, int value, string comment) | 
|---|
|  | 2350 | { | 
|---|
|  | 2351 | char cvalue[16]; | 
|---|
|  | 2352 | sprintf(cvalue,"%d",value); | 
|---|
|  | 2353 | FitsKeyword kw(keyname, string(cvalue), comment, 'I'); | 
|---|
|  | 2354 | mots_cles_.push_back(kw); | 
|---|
|  | 2355 | } | 
|---|
|  | 2356 | void FitsOutFile::insertKeywordOnHeader(string keyname, string value, string comment) | 
|---|
|  | 2357 | { | 
|---|
|  | 2358 | FitsKeyword kw(keyname, value , comment, 'C'); | 
|---|
|  | 2359 | mots_cles_.push_back(kw); | 
|---|
|  | 2360 | } | 
|---|
| [1353] | 2361 |  | 
|---|
|  | 2362 | void FitsOutFile::insertCommentLineOnHeader(string comment) | 
|---|
|  | 2363 | { | 
|---|
|  | 2364 | FitsKeyword kw(comment); | 
|---|
|  | 2365 | mots_cles_.push_back(kw); | 
|---|
|  | 2366 | } | 
|---|
|  | 2367 |  | 
|---|
|  | 2368 | void FitsOutFile::PrintHeaderToBeAppended() | 
|---|
|  | 2369 | { | 
|---|
|  | 2370 | cout << " contenu du header en cours de fabrication " << endl; | 
|---|
|  | 2371 | for (list<FitsKeyword>::iterator it=mots_cles_.begin(); it !=mots_cles_.end(); it++) | 
|---|
|  | 2372 | { | 
|---|
|  | 2373 | (*it).Print(); | 
|---|
|  | 2374 | } | 
|---|
|  | 2375 | } | 
|---|
|  | 2376 |  | 
|---|
|  | 2377 |  | 
|---|
|  | 2378 | FitsKeyword::FitsKeyword() | 
|---|
|  | 2379 | { | 
|---|
|  | 2380 | datatype_=' '; | 
|---|
|  | 2381 | keyname_ = string(""); | 
|---|
|  | 2382 | dvalue_=0.; | 
|---|
|  | 2383 | ivalue_=1; | 
|---|
|  | 2384 | svalue_=string(""); | 
|---|
|  | 2385 | comment_=string(""); | 
|---|
|  | 2386 | } | 
|---|
|  | 2387 |  | 
|---|
|  | 2388 | FitsKeyword::FitsKeyword(string comment) | 
|---|
|  | 2389 | { | 
|---|
|  | 2390 | datatype_=' '; | 
|---|
|  | 2391 | keyname_=string("COMMENT"); | 
|---|
|  | 2392 | comment_=comment; | 
|---|
| [1418] | 2393 | } | 
|---|
| [1353] | 2394 |  | 
|---|
|  | 2395 | FitsKeyword::FitsKeyword(string keyname, string value, string comment) :  keyname_(keyname), comment_(comment) | 
|---|
|  | 2396 | { | 
|---|
|  | 2397 | int status=0; | 
|---|
|  | 2398 | char dtype; | 
|---|
|  | 2399 | const char* val= value.c_str(); | 
|---|
|  | 2400 | char* valk = const_cast<char*>(val); | 
|---|
|  | 2401 | fits_get_keytype(valk,&dtype,&status); | 
|---|
|  | 2402 | if(status) | 
|---|
|  | 2403 | { | 
|---|
|  | 2404 | status=0; | 
|---|
| [1354] | 2405 | if (status == VALUE_UNDEFINED) cout << "WARNING (FitsKeyword) : undefined keyword value " << endl; | 
|---|
| [1353] | 2406 | datatype_=' '; | 
|---|
|  | 2407 | } | 
|---|
|  | 2408 | else     datatype_=dtype; | 
|---|
|  | 2409 |  | 
|---|
|  | 2410 | switch( datatype_ ) | 
|---|
|  | 2411 | { | 
|---|
|  | 2412 | case 'C': | 
|---|
|  | 2413 | { | 
|---|
| [1354] | 2414 | strip(valk, 'B','\''); | 
|---|
|  | 2415 | svalue_ = string(valk); | 
|---|
| [1353] | 2416 | break; | 
|---|
|  | 2417 | } | 
|---|
|  | 2418 | case 'I': | 
|---|
|  | 2419 | { | 
|---|
|  | 2420 | ivalue_ = atoi(val); | 
|---|
|  | 2421 | break; | 
|---|
|  | 2422 | } | 
|---|
|  | 2423 | case 'L': | 
|---|
|  | 2424 | { | 
|---|
| [1354] | 2425 | bool bb = value.c_str(); | 
|---|
|  | 2426 | ivalue_ = (int)bb; | 
|---|
| [1353] | 2427 | break; | 
|---|
|  | 2428 | } | 
|---|
|  | 2429 | case 'F': | 
|---|
|  | 2430 | { | 
|---|
|  | 2431 | dvalue_ = atof(val); | 
|---|
|  | 2432 | break; | 
|---|
|  | 2433 | } | 
|---|
|  | 2434 | case 'X': | 
|---|
|  | 2435 | { | 
|---|
|  | 2436 | throw IOExc("FitsKeyword , complex keyword value not supported"); | 
|---|
|  | 2437 | } | 
|---|
|  | 2438 | } | 
|---|
|  | 2439 | } | 
|---|
|  | 2440 |  | 
|---|
| [1418] | 2441 | // constructeur pour les mots-cles maison (ne prvenant pas de la lecture d'un fichier fits) | 
|---|
|  | 2442 | FitsKeyword::FitsKeyword(string keyname, string value, string comment, char type) :  keyname_(keyname), comment_(comment), datatype_(type) | 
|---|
|  | 2443 | { | 
|---|
|  | 2444 | char dtype; | 
|---|
|  | 2445 | const char* val= value.c_str(); | 
|---|
|  | 2446 | char* valk = const_cast<char*>(val); | 
|---|
|  | 2447 | switch( datatype_ ) | 
|---|
|  | 2448 | { | 
|---|
|  | 2449 | case 'C': | 
|---|
|  | 2450 | { | 
|---|
|  | 2451 | strip(valk, 'B','\''); | 
|---|
|  | 2452 | svalue_ = string(valk); | 
|---|
|  | 2453 | break; | 
|---|
|  | 2454 | } | 
|---|
|  | 2455 | case 'I': | 
|---|
|  | 2456 | { | 
|---|
|  | 2457 | ivalue_ = atoi(val); | 
|---|
|  | 2458 | break; | 
|---|
|  | 2459 | } | 
|---|
|  | 2460 | case 'L': | 
|---|
|  | 2461 | { | 
|---|
|  | 2462 | bool bb = value.c_str(); | 
|---|
|  | 2463 | ivalue_ = (int)bb; | 
|---|
|  | 2464 | break; | 
|---|
|  | 2465 | } | 
|---|
|  | 2466 | case 'F': | 
|---|
|  | 2467 | { | 
|---|
|  | 2468 | dvalue_ = atof(val); | 
|---|
|  | 2469 | break; | 
|---|
|  | 2470 | } | 
|---|
|  | 2471 | case 'X': | 
|---|
|  | 2472 | { | 
|---|
|  | 2473 | throw IOExc("FitsKeyword , complex keyword value not supported"); | 
|---|
|  | 2474 | } | 
|---|
|  | 2475 | } | 
|---|
|  | 2476 | } | 
|---|
|  | 2477 |  | 
|---|
| [1353] | 2478 | void FitsKeyword::writeOnFits(fitsfile* ptr) | 
|---|
|  | 2479 | { | 
|---|
|  | 2480 | int status=0; | 
|---|
| [1418] | 2481 | char keyname[LEN_KEYWORD]; | 
|---|
|  | 2482 | char comment[FLEN_COMMENT]; | 
|---|
|  | 2483 | keyname_.copy(keyname, LEN_KEYWORD); | 
|---|
|  | 2484 | int bout = (keyname_.length() < LEN_KEYWORD) ? keyname_.length() : LEN_KEYWORD-1; | 
|---|
|  | 2485 | keyname[bout] = '\0'; | 
|---|
|  | 2486 | comment_.copy( comment, FLEN_COMMENT); | 
|---|
|  | 2487 | bout = (comment_.length() < FLEN_COMMENT) ? comment_.length() : FLEN_COMMENT-1; | 
|---|
|  | 2488 | comment[bout]= '\0'; | 
|---|
|  | 2489 |  | 
|---|
| [1353] | 2490 | int nkeys,keypos; | 
|---|
|  | 2491 | fits_get_hdrpos(ptr,&nkeys,&keypos,&status); | 
|---|
|  | 2492 | switch( datatype_ ) | 
|---|
|  | 2493 | { | 
|---|
|  | 2494 | case 'C': | 
|---|
|  | 2495 | { | 
|---|
| [1418] | 2496 | char value[FLEN_VALUE]=""; | 
|---|
|  | 2497 | svalue_.copy(value, FLEN_VALUE-1); | 
|---|
|  | 2498 | int fin =  (svalue_.length() < FLEN_VALUE) ? svalue_.length() : FLEN_VALUE-1; | 
|---|
|  | 2499 | value[fin]= '\0'; | 
|---|
| [1353] | 2500 | fits_write_key(ptr,TSTRING,keyname,&value, comment,&status); | 
|---|
|  | 2501 | fits_report_error(stderr,status); | 
|---|
|  | 2502 | break; | 
|---|
|  | 2503 | } | 
|---|
|  | 2504 | case 'I': | 
|---|
|  | 2505 | { | 
|---|
|  | 2506 | fits_write_key(ptr,TINT,keyname,&ivalue_, comment,&status); | 
|---|
|  | 2507 | fits_report_error(stderr,status); | 
|---|
|  | 2508 | break; | 
|---|
|  | 2509 | } | 
|---|
|  | 2510 | case 'L': | 
|---|
|  | 2511 | { | 
|---|
|  | 2512 | fits_write_key(ptr,TLOGICAL,keyname,&ivalue_, comment,&status); | 
|---|
|  | 2513 | fits_report_error(stderr,status); | 
|---|
|  | 2514 | break; | 
|---|
|  | 2515 | } | 
|---|
|  | 2516 | case 'F': | 
|---|
|  | 2517 | { | 
|---|
|  | 2518 | fits_write_key(ptr,TDOUBLE,keyname,&dvalue_, comment,&status); | 
|---|
|  | 2519 | fits_report_error(stderr,status); | 
|---|
|  | 2520 | break; | 
|---|
|  | 2521 | } | 
|---|
|  | 2522 | case 'X': | 
|---|
|  | 2523 | { | 
|---|
|  | 2524 | cout << "FitsKeyword : complex keyword value not supported" << endl;; | 
|---|
| [2197] | 2525 | break; | 
|---|
| [1353] | 2526 | } | 
|---|
|  | 2527 | default : | 
|---|
|  | 2528 | { | 
|---|
|  | 2529 | char *comkey = "COMMENT"; | 
|---|
|  | 2530 | if(strncmp(keyname,comkey,LEN_KEYWORD-1) == 0) | 
|---|
|  | 2531 | { | 
|---|
|  | 2532 | fits_write_comment(ptr,comment,&status); | 
|---|
|  | 2533 | fits_report_error(stderr,status); | 
|---|
|  | 2534 | } | 
|---|
|  | 2535 | else | 
|---|
|  | 2536 | { | 
|---|
|  | 2537 | cout << " WARNING  (FitsKeyword::writeOnFits) : unrecognized keyword : " << keyname_ << endl; | 
|---|
|  | 2538 | } | 
|---|
|  | 2539 | } | 
|---|
|  | 2540 | } | 
|---|
|  | 2541 | } | 
|---|
|  | 2542 |  | 
|---|
|  | 2543 | void FitsKeyword::Print() | 
|---|
|  | 2544 | { | 
|---|
|  | 2545 | switch( datatype_ ) | 
|---|
|  | 2546 | { | 
|---|
|  | 2547 | case 'C': | 
|---|
|  | 2548 | { | 
|---|
|  | 2549 | cout << " mot cle : " << keyname_ << " valeur : " << svalue_ << " commentaire : " << comment_ <<endl; | 
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|  | 2550 | break; | 
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|  | 2551 | } | 
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|  | 2552 | case 'I': | 
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|  | 2553 | { | 
|---|
|  | 2554 | cout << " mot cle : " << keyname_ << " valeur : " << ivalue_ << " commentaire : " << comment_ <<endl; | 
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|  | 2555 | break; | 
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|  | 2556 | } | 
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|  | 2557 | case 'L': | 
|---|
|  | 2558 | { | 
|---|
|  | 2559 | cout << " mot cle : " << keyname_ << " valeur : " << ivalue_ << " commentaire : " << comment_ <<endl; | 
|---|
|  | 2560 | break; | 
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|  | 2561 | } | 
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|  | 2562 | case 'F': | 
|---|
|  | 2563 | { | 
|---|
|  | 2564 | cout << " mot cle : " << keyname_ << " valeur : " << dvalue_ << " commentaire : " << comment_ <<endl; | 
|---|
|  | 2565 | break; | 
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|  | 2566 | } | 
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|  | 2567 | case 'X': | 
|---|
|  | 2568 | { | 
|---|
|  | 2569 | cout << "FitsKeyword : complex keyword value not supported" << endl;; | 
|---|
|  | 2570 | } | 
|---|
|  | 2571 | default : | 
|---|
|  | 2572 | { | 
|---|
|  | 2573 | cout << " mot cle : " << keyname_ << " commentaire : "  << comment_ <<endl; | 
|---|
|  | 2574 | } | 
|---|
|  | 2575 | } | 
|---|
|  | 2576 | } | 
|---|