source: Sophya/trunk/SophyaExt/FitsIOServer/fitsfile.cc@ 3007

Last change on this file since 3007 was 2907, checked in by ansari, 20 years ago

debug/check fits : gestion NTuple colonnes double + init hdunum_ ds FitsFile(FitsInOutFile&) + correction gestion TArray/TMatrix/TVector ds fitsarrhand.h - Reza 17/01/2006

File size: 70.0 KB
RevLine 
[2615]1#include "sopnamsp.h"
[949]2#include "machdefs.h"
3#include <stdlib.h>
[839]4#include "fitsfile.h"
5#include "pexceptions.h"
6#include "strutil.h"
[903]7#include "anydataobj.h"
[1136]8
[1371]9/*!
10 \defgroup FitsIOServer FitsIOServer module
11 This module contains classes which handle FITS format I/O for
12 SOPHYA objects. This module uses cfitsio library.
13*/
[1136]14
[1359]15void BnTblLine::setFormat(int dc, int fc, int ic, int lc, int bc,int cc, vector<string> names)
[1218]16 {
[1359]17 int nbcols = dc + fc + ic + cc + lc + bc;
[1218]18 int maxName = names.size();
19 if (nbcols != maxName)
20 {
21 cout << " WARNING: BnTblLine:: length of vector of column names not equal to total number of columns" << endl;
22 maxName = nbcols < maxName ? nbcols : maxName;
23 }
24 ColName_ = vector<string>(nbcols);
[2209]25 int k;
26 for (k=0; k < maxName; k++) ColName_[k] = names[k];
[1218]27 if (dc >0) ddata_ = vector<double>(dc);
28 if (fc >0) fdata_ = vector<float>(fc);
[2197]29 if (ic >0) idata_ = vector<int>(ic);
[1359]30 if (lc >0) ldata_ = vector<long>(lc);
31 if (bc >0) bdata_ = vector<unsigned char>(bc);
[2197]32 if (cc >0) cdata_ = vector<string>(cc);
[1218]33 }
34
35bool BnTblLine::sameFormat(const BnTblLine& btl) const
36 {
[1359]37 if (btl.ddata_.size() == ddata_.size() && btl.fdata_.size() == fdata_.size() && btl.idata_.size() == idata_.size() && btl.cdata_.size() == cdata_.size() && btl.ldata_.size() == ldata_.size() && btl.bdata_.size() == bdata_.size()) return true;
[1218]38 else return false;
39 }
40
41void BnTblLine::Print()
42 {
43 int k;
44 cout << " ********* ligne ************* " << endl;
45 cout << " *** noms de variables " << endl;
46 for (k=0; k < ColName_.size(); k++) cout << ColName_[k] << " ";
47 cout << endl;
48 cout << " *** variables doubles " << endl;
49 for (k=0; k < ddata_.size(); k++) cout << ddata_[k] << " ";
50 cout << endl;
51 cout << " *** variables float " << endl;
52 for (k=0; k < fdata_.size(); k++) cout << fdata_[k] << " ";
53 cout << endl;
54 cout << " *** variables int " << endl;
55 for (k=0; k < idata_.size(); k++) cout << idata_[k] << " ";
56 cout << endl;
57 cout << " *** variables string " << endl;
58 for (k=0; k < cdata_.size(); k++) cout << cdata_[k] << " ";
59 cout << endl;
[1359]60 cout << " *** variables long " << endl;
61 for (k=0; k < ldata_.size(); k++) cout << ldata_[k] << " ";
62 cout << endl;
63 cout << " *** variables byte " << endl;
64 for (k=0; k < bdata_.size(); k++) cout << (int)bdata_[k] << " ";
65 cout << endl;
[1218]66 cout << " ***************************** " << endl;
67 }
68
[2197]69FitsFile::BufferLine::BufferLine(const vector<FitsFile::FitsDataType>& types)
70{
[1218]71
72
[2197]73 int dc=0;
74 int fc=0;
75 int shc=0;
76 int ic=0;
77 int lc=0;
78 int cc=0;
79 int bc=0;
80 id_ = vector< pair<FitsFile::FitsDataType, int> >(types.size());
[2209]81 int k;
82 for (k= 0; k < types.size(); k++)
[2197]83 {
84 switch( types[k] )
85 {
86 case FitsFile::FitsDataType_double :
87 {
88 id_[k] = pair<FitsFile::FitsDataType, int>(FitsFile::FitsDataType_double, dc);
89 dc++;
90 break;
91 }
92 case FitsFile::FitsDataType_float :
93 {
94 id_[k] = pair<FitsFile::FitsDataType, int>(FitsFile::FitsDataType_float, fc);
95 fc++;
96 break;
97 }
98 case FitsFile::FitsDataType_short :
99 {
100 id_[k] = pair<FitsFile::FitsDataType, int>(FitsDataType_short, shc);
101 shc++;
102 break;
103 }
104 case FitsFile::FitsDataType_int :
105 {
106 id_[k] = pair<FitsFile::FitsDataType, int>(FitsDataType_int, ic);
107 ic++;
108 break;
109 }
110 case FitsFile::FitsDataType_long :
111 {
112 id_[k] = pair<FitsFile::FitsDataType, int>(FitsFile::FitsDataType_long, lc);
113 lc++;
114 break;
115 }
116 case FitsFile::FitsDataType_byte :
117 {
118 id_[k] = pair<FitsFile::FitsDataType, int>(FitsFile::FitsDataType_byte, bc);
119 bc++;
120 break;
121 }
122 case FitsDataType_char :
123 {
124 id_[k] = pair<FitsFile::FitsDataType, int>(FitsFile::FitsDataType_char, cc);
125 cc++;
126 break;
127 }
128 default:
129 {
130 throw PException(" FitsFile::getHeaderWithSophyaObject() : unsupported FITS data type");
131 }
132 }
133 }
134
135 if (dc >0) ddata_ = vector<r_8>(dc);
136 if (fc >0) fdata_ = vector<r_4>(fc);
137 if (shc >0) shdata_ = vector<int_2>(shc);
138 if (ic >0) idata_ = vector<int_4>(ic);
139 if (lc >0) ldata_ = vector<int_8>(lc);
140 if (cc >0) cdata_ = vector<string>(cc);
141 if (bc >0) bdata_ = vector<unsigned char>(bc);
142}
143
144
145void FitsFile::BufferLine::Print() const
146{
147 cout << " impression de la ligne: " << endl;
148
149 cout << " doubles : " << endl;
[2209]150 int k;
151 for (k=0; k< ddata_.size(); k++)
[2197]152 {
153 cout << ddata_[k] << " " ;
154 }
155 cout << endl;
156
157 cout << " floats : " << endl;
[2209]158 for (k=0; k< fdata_.size(); k++)
[2197]159 {
160 cout << fdata_[k] << " " ;
161 }
162 cout << endl;
163
164 cout << " entiers courts: " << endl;
[2209]165 for (k=0; k< shdata_.size(); k++)
[2197]166 {
167 cout << shdata_[k] << " " ;
168 }
169 cout << endl;
170 cout << " entiers : " << endl;
[2209]171 for (k=0; k< idata_.size(); k++)
[2197]172 {
173 cout << idata_[k] << " " ;
174 }
175 cout << endl;
176
177 cout << " entiers longs : " << endl;
[2209]178 for (k=0; k< ldata_.size(); k++)
[2197]179 {
180 cout << ldata_[k] << " " ;
181 }
182 cout << endl;
183
184 cout << " chaines carac. : " << endl;
[2209]185 for (k=0; k< cdata_.size(); k++)
[2197]186 {
187 cout << cdata_[k] << " " ;
188 }
189 cout << endl;
190
191 cout << " bytes : " << endl;
[2209]192 for (k=0; k< bdata_.size(); k++)
[2197]193 {
194 cout << (char)bdata_[k] << " " ;
195 }
196 cout << endl;
197
198
199}
200
[1218]201/*!
202 \class SOPHYA::FitsIOHandler
[1371]203 \ingroup FitsIOServer
[1218]204The class structure is analogous to Sophya-PPersist system :
205Each SOPHYA object XXX is associated with a object of class FITS_XXX
206 (inheriting from FitsFileHandler), to which input/output operations with FITS
207 files are delegated (through a class Hierarchy : FitsFile (virtual),
208 FitsInFile, FitsOutFile) . A typical example of use is the following :
209
210\verbatim
211 int m=... ;
212 SphereHEALPix<r_8> sphere1(m); // definition of the SOPHYA object
213 .... fill the sphere ....
214
215 FITS_SphereHEALPix<r_8> fits_sph1(sphere1);
216 // delegated object
217 fits_sph.Write("myfile.fits"); // writing on FITS file
218
219 FITS_SphereHEALPix<r_8> fits_sph2("myfile.fits");
220 // load a delegated object
221 // from FITS file
222 SphereHEALPix<r_8> sphere2=(SphereHEALPix<r_8>)fits_sph2;
223 // casting the delegated object
224 // into a SOPHYA object
225\endverbatim
226
227
228*/
229
230/*! \fn void SOPHYA::FitsIOHandler::Read(char flnm[],int hdunum)
231
232this method is called from inherited objects :
233
234opens a file 'flnm'
235
236gets parameters in extension-header (hdunum)
237
238calls the method 'ReadFromFits' from the inherited object
239*/
[1136]240void FitsIOHandler::Read(char flnm[],int hdunum)
[839]241{
[1136]242 FitsInFile ifts(flnm);
243 Read(ifts, hdunum);
[839]244}
[1218]245
[2897]246void FitsIOHandler::Read(FitsInOutFile& is)
247{
248 FitsInFile fis(is);
[2898]249 fis.ReadHeader(fis.CurrentHDU());
[2897]250 ReadFromFits(fis);
251}
252
[1218]253 /*! \fn void SOPHYA::FitsIOHandler::Read(FitsInFile& is, int hdunum)
254Read the data on extension hdunum (or primary header, if hdunum=1) from FitsInFIle. If hdunum is not addressed, , one reads the next extension, with respect to the current position.
255 */
[1136]256void FitsIOHandler::Read(FitsInFile& is, int hdunum)
257{
[1300]258 is.ReadHeader(hdunum);
[1136]259 ReadFromFits(is);
260}
261
262
[1218]263/*! \fn void SOPHYA::FitsIOHandler::Write(char flnm[])
264this method is called from inherited objects.
265
266for writing a new object in a new fits-extension :
267
[1234]268\warning By convention, primary header may contain fits-image data.
269For switching off this convention (i.e. to make sure that all data will be on fits-extensions) use the method :
[1218]270
271firstImageOnPrimaryHeader() (see below)
272
273calls the method 'WriteToFits' from the inherited object
274
275*/
[1193]276void FitsIOHandler::Write(char flnm[])
[1136]277
278{
[1231]279 FitsOutFile of(flnm, FitsFile::unknown);
[2897]280 WriteToFits(of);
[1136]281}
282
[2897]283void FitsIOHandler::Write(FitsInOutFile& os)
[1136]284{
[2897]285 FitsOutFile fos(os);
286 WriteToFits(fos);
[1136]287}
288
289
[2860]290FitsFile::FitsFile()
291 : FitsInOutFile()
292{
293 InitNull();
294}
[1136]295
[2860]296FitsFile::FitsFile(FitsInOutFile const& fios)
297 : FitsInOutFile(fios)
298{
299 InitNull();
[2907]300 hdunum_ = fios.CurrentHDU();
[2860]301}
302
303
304/*RzDel
[839]305FitsFile::~FitsFile()
306{
[2860]307 // Close fait par le destructeur de FitsInOutFile - Reza , Dec 2005
308 // int status = 0;
309 // if( fptr_ != NULL)
310 // fits_close_file(fptr_,&status);
311 // if( status ) printerror( status );
[839]312}
[2860]313*/
[903]314
[1136]315
316void FitsFile::printerror(int &status)
317 //*****************************************************/
318 //* Print out cfitsio error messages and exit program */
319 //*****************************************************/
[1045]320{
[1136]321 if( status )
322 {
323 fits_report_error(stderr,status);
324 throw IOExc("FitsFile:: error FITSIO status");
325 }
326 return;
327}
[903]328
[1136]329void FitsFile::printerror(int& status, char* texte)
330 //*****************************************************/
331 //* Print out cfitsio error messages and exit program */
332 //*****************************************************/
333{
334 // print out cfitsio error messages and exit program
335 // print error report
[1235]336 fits_report_error(stderr, status);
[1136]337 cout << " erreur:: " << texte << endl;
338 throw IOExc("FitsFile:: error FITSIO status");
339}
[1703]340void FitsFile::printerrorAndContinue(int& status, char* texte)
341 //*****************************************************/
342 //* Print out cfitsio error messages and exit program */
343 //*****************************************************/
344{
345 // print out cfitsio error messages and exit program
346 // print error report
347 fits_report_error(stderr, status);
348 cout << " erreur:: " << texte << endl;
349 // throw IOExc("FitsFile:: error FITSIO status");
350}
[1136]351
352void FitsFile::ResetStatus(int& status)
353{
354 fits_status_ = status;
355 status = 0;
[1235]356 fits_clear_errmsg();
[1136]357}
358
[1209]359string FitsFile::GetErrStatus(int status)
[1136]360{
361 char text[31];
362 fits_get_errstatus(status, text);
363 return string(text);
364}
365
[1218]366/*!
367 \class SOPHYA::FitsInFile
[1371]368 \ingroup FitsIOServer
[1246]369class for reading SOPHYA objects from FITS Format Files (uses cfitsio lib)
[1218]370*/
371
[1136]372FitsInFile::FitsInFile()
[2860]373 : FitsFile()
374
[1136]375{
376 InitNull();
377}
[1218]378
[1231]379FitsInFile::FitsInFile(string const & flnm)
[2860]380 : FitsFile()
[1136]381{
[2860]382 InitNull();
383 Open(flnm.c_str(), Fits_RO);
384 /*RZDEL
[1175]385 int status = 0;
[1231]386 fits_open_file(&fptr_,flnm.c_str(),READONLY,&status);
387 if( status ) printerror( status );
[2860]388 */
[1231]389}
390
391FitsInFile::FitsInFile(const char * flnm)
[2860]392 : FitsFile()
[1231]393{
[2860]394 InitNull();
395 Open(flnm, Fits_RO);
396 /*RZDEL
397 int status = 0;
[1175]398 fits_open_file(&fptr_,flnm,READONLY,&status);
399 if( status ) printerror( status );
[2860]400 */
[1136]401}
402
[2860]403FitsInFile::FitsInFile(FitsInOutFile const& fios)
404 : FitsFile(fios)
[1136]405
[2860]406{
407 InitNull();
408 if (mode_ == Fits_Create)
409 throw FitsIOException("FitsInFile::FitsInFile(FitsInOutFile const& fios) newly created fits file");
410}
411
412
[1136]413void FitsInFile::InitNull()
414{
[1300]415 imageDataType_ = FitsDataType_NULL;
[1045]416 naxis_ = 0;
417 nbData_ = 0;
418 nrows_ = 0;
419 nbcols_ = 0;
420 naxisn_.clear();
421 repeat_.clear();
422 noms_.clear();
423 taille_des_chaines_.clear();
424 dvl_.Clear();
[1978]425
426 dnull_ = 1.e-300;
427 fnull_ = 1.e-33;
428 inull_= 99999;
429 cnull_= string("xxx");
[1175]430
[1978]431
[1045]432}
433
[1218]434//////////////////////////////////////////////////////////
435// methods with general purpose
436/////////////////////////////////////////////////////////
[1045]437
[1136]438int FitsInFile::NbBlocks(char flnm[])
[903]439{
440 int status = 0;
441 int nbhdu = 0;
442 fitsfile* fileptr;
443 fits_open_file(&fileptr,flnm,READONLY,&status);
444 if( status ) printerror( status, "NbBlocks: erreur ouverture fichier" );
445 fits_get_num_hdus(fileptr, &nbhdu, &status);
446 fits_close_file(fileptr,&status);
447 return nbhdu;
448}
[1334]449int FitsInFile::NbBlocks()
450{
451 int status = 0;
452 int nbhdu = 0;
453 fits_get_num_hdus(fptr_, &nbhdu, &status);
454 return nbhdu;
455}
[903]456
[1231]457void FitsInFile::GetBlockType(char flnm[], int hdunum, FitsExtensionType& typeOfExtension, int& naxis, vector<int>& naxisn, FitsDataType& dataType, DVList& dvl )
[903]458{
459 int status = 0;
460 fitsfile* fileptr;
461 fits_open_file(&fileptr,flnm,READONLY,&status);
[1209]462 if( status ) printerror( status, "GetBlockType: erreur ouverture fichier" );
[903]463 // move to the specified HDU number
464 int hdutype = 0;
465 fits_movabs_hdu(fileptr,hdunum,&hdutype,&status);
[1209]466 if( status ) printerror( status,"GetBlockType: erreur movabs");
[903]467 if(hdutype == IMAGE_HDU)
468 {
[1231]469 typeOfExtension = FitsExtensionType_IMAGE;
[1300]470 GetImageParameters (fileptr, dataType, naxis, naxisn);
[903]471 }
472 else
473 if(hdutype == ASCII_TBL || hdutype == BINARY_TBL)
474 {
475 int nrows = 0;
476 vector<string> noms;
[1300]477 vector<FitsDataType> types;
[903]478 vector<int> taille_des_chaines;
[971]479 GetBinTabParameters(fileptr, naxis, nrows, naxisn, noms, types, taille_des_chaines);
480 int k;
481 for (k=0; k< naxisn.size(); k++) naxisn[k] *= nrows;
[903]482 if(hdutype == ASCII_TBL)
483 {
[1231]484 typeOfExtension = FitsExtensionType_ASCII_TBL;
485 dataType = FitsDataType_ASCII;
[903]486 }
487 else
488 {
[1231]489 typeOfExtension = FitsExtensionType_BINARY_TBL;
[1300]490 dataType = types[0];
[903]491 }
492 }
493 else
494 {
495 cout << " hdutype= " << hdutype << endl;
[1209]496 throw IOExc("FitsFile::GetBlockType: this HDU type is unknown");
[903]497 }
498
[971]499 KeywordsIntoDVList(fileptr, dvl, hdunum);
[903]500 fits_close_file(fileptr,&status);
501}
502
[1136]503
[1300]504void FitsInFile::ReadHeader(int hdunum)
[1045]505{
[1300]506 // InitNull();
[1045]507 int status = 0;
[1334]508 if (hdunum<0)
509 {
[1703]510 throw PException(" FitsInFile::ReadHeader : hdu number must be not negative");
[1334]511 }
[1234]512 if (hdunum != 0 ) hdunum_ = hdunum;
513
514 // si le numero de header non precise
515 else
[1045]516 {
[1234]517 // si c'est le premier objet a lire
518 if (hdunum_ == 0)
[1045]519 {
[1234]520 // on calcule le numero de header a lire
[1246]521 if (imageOnPrimary_ == true ) hdunum_ = 1;
[1234]522 else hdunum_ = 2;
[1045]523 }
[1234]524 // sinon objet suivant
525 else hdunum_++;
[1045]526 }
[1771]527 getHeaderWithSophyaObject();
[1334]528 if ( hdutype_ == FitsExtensionType_NULL )
529 {
530 if (hdunum == 0 && hdunum_ == 1)
531 {
532 hdunum_++;
[1771]533 getHeaderWithSophyaObject();
[1334]534 }
535 else
536 {
537 cout << " WARNING (FitsInFile::ReadHeader) : no SOPHYA object on HDU number : " << hdunum_ << endl;
538 }
539 }
[1418]540 if ( hdutype_ == FitsExtensionType_EOF )
541 {
542 throw PException("FitsFile::ReadHeader, attempt to read through EOF");
543 }
[1045]544}
545
[1354]546string FitsInFile::getStringKeyword(int hdunum, string keyw, int& retStatus)
547{
548 string s;
549 retStatus = 0;
550 int status = 0;
551 if (hdunum != hdunum_ )
552 {
553 int hdutype;
554 fits_movabs_hdu(fptr_,hdunum,&hdutype,&status);
555 }
556
557 char value[FLEN_VALUE];
558 char* keyname= const_cast<char*>(keyw.c_str());
559 fits_read_key_str(fptr_,keyname,value,NULL,&status);
560 if (status == 0)
561 s = string(value);
562 else retStatus = status;
563 if (hdunum != hdunum_ )
564 {
565 int hdutype;
566 if (hdunum_ != 0)
567 fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
568 else fits_movabs_hdu(fptr_,1,&hdutype,&status);
569
570 }
571 return s;
572}
573bool FitsInFile::hasKeyword(int hdunum, string keyw)
[1353]574 {
575 bool has=false;
576 int status = 0;
577 if (hdunum != hdunum_ )
578 {
579 int hdutype;
580 fits_movabs_hdu(fptr_,hdunum,&hdutype,&status);
581 }
[1218]582
[1353]583 char value[FLEN_VALUE];
584 char* keyname= const_cast<char*>(keyw.c_str());
585 fits_read_keyword(fptr_,keyname,value,NULL,&status);
586 if (status == 0)
587 has = true;
588 else
589 if (status == KEY_NO_EXIST ) status =0;
590 else fits_report_error(stderr,status);
591 if (hdunum != hdunum_ )
592 {
593 int hdutype;
594 if (hdunum_ != 0)
595 fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
596 else fits_movabs_hdu(fptr_,1,&hdutype,&status);
597
598 }
599 return has;
600 }
601
[1771]602void FitsInFile::GetKeywordsFromHeader (int hdunum, list<FitsKeyword>& mots_cles) const
603{
604 int status = 0;
605 int hdutype;
606 fits_movabs_hdu(fptr_,hdunum,&hdutype,&status);
607 if( status ) fits_report_error(stderr,status);
608
609 // get number of keywords
610 int nkeys,keypos;
611 fits_get_hdrpos(fptr_, &nkeys, &keypos,&status);
612 if( status ) fits_report_error(stderr,status);
613 // shift with the number of mandatory keywords
614 int num= 0;
615 // if primary header
616 if (hdunum == 1)
617 {
618 // read NAXIS
619 int naxis=0;
620 fits_read_key(fptr_,TINT,"NAXIS",&naxis,NULL,&status);
621 // number of mandatory keywords
622 num = naxis+3;
623 }
624 // extensions
625 else
626 {
627 if (hdutype == IMAGE_HDU)
628 {
629 // read NAXIS
630 int naxis=0;
631 fits_read_key(fptr_,TINT,"NAXIS",&naxis,NULL,&status);
632 // number of mandatory keywords
633 num = naxis+5;
634 }
635 else
636 if(hdutype == ASCII_TBL || hdutype == BINARY_TBL)
637 {
638 // number of mandatory keywords
639 num = 8;
640 }
641 }
642 int j;
643 char keyname[LEN_KEYWORD];
644 char value[FLEN_VALUE];
645 char comment[FLEN_COMMENT];
646 for(j = num+1; j <= nkeys; j++)
647 {
648 char dtype;
649 fits_read_keyn(fptr_,j,keyname,value,comment,&status);
650 if(status)
651 {
652 fits_report_error(stderr,status);
653 status=0;
654 }
655 string kn(keyname);
656 string cm(comment);
657 string val(value);
658 FitsKeyword kw(kn, val, cm);
659 mots_cles.push_back(kw);
660 }
661 if (hdunum_ > 0) fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
662
663}
[1300]664void FitsInFile::GetImageParameters (fitsfile* fileptr,FitsDataType& dataType,int& naxis,vector<int>& naxisn)
[1218]665{
666 int hdunum=0;
[1334]667 // cout << " Reading a FITS image in HDU : " << fits_get_hdu_num(fileptr,&hdunum) << endl;
[1218]668 int status= 0;
669
670 // bits per pixels
[1300]671 int bitpix=0;
[1218]672 fits_read_key(fileptr,TINT,"BITPIX",&bitpix,NULL,&status);
673 if( status ) printerror( status );
[1300]674 if(bitpix == DOUBLE_IMG) dataType = FitsDataType_double;
675 else if(bitpix == FLOAT_IMG) dataType = FitsDataType_float;
676 else if(bitpix == LONG_IMG || bitpix == SHORT_IMG ) dataType = FitsDataType_int;
677 else if (bitpix == BYTE_IMG) dataType = FitsDataType_char;
678 else
679 {
680 cout << " bitpix= " << bitpix << endl;
681 throw PException(" FitsFile::GetImageParameters : unsupported FITS data type");
682 }
[1218]683
684 // number of dimensions in the FITS array
685 naxis= 0;
686 fits_read_key(fileptr,TINT,"NAXIS",&naxis,NULL,&status);
687 if( status ) printerror( status );
688 // read the NAXISn keywords to get image size
689 long* naxes = new long[naxis] ;
690 int nfound;
691 fits_read_keys_lng(fileptr,"NAXIS",1,naxis,naxes,&nfound,&status);
692 if( status ) printerror( status );
693 if (nfound != naxis )
694 cout << " WARNING : " << nfound << " axes found, expected naxis= " << naxis << endl;
695 int k;
696 for (k=0; k<naxis; k++)
697 {
698 naxisn.push_back( (int)naxes[k] );
699 }
700 delete [] naxes;
701}
702
703
704
705
706 /*! \fn DVList SOPHYA::FitsInFile::DVListFromPrimaryHeader() const
707
708 \return the keywords of primary header in a DVList
709
710*/
[1143]711DVList FitsInFile::DVListFromPrimaryHeader() const
712 {
713 int status;
714 DVList dvl;
715 KeywordsIntoDVList(fptr_, dvl, 1);
716 int hdutype = 0;
717 if (hdunum_ > 0) fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
718 return dvl;
719 }
[1136]720
[1771]721void FitsInFile::getHeaderWithSophyaObject()
[971]722{
[1300]723 // si hdunum_ > 1 lit le header correspondant
724 // si hdunum_ = 1 se positionne au (et lit le) premier header qui
725 // contient reellement un objet
[1234]726 int status=0;
727 if (hdunum_ < 1) throw PException(" attempt to read hdunum < 1");
[1300]728 InitNull();
[1234]729 if (hdunum_ == 1)
[839]730 {
[1234]731 // presence of image ?
732 int naxis= 0;
733 fits_read_key(fptr_,TINT,"NAXIS",&naxis,NULL,&status);
734 if( status ) printerror( status );
735 if (naxis > 0 ) // there is an image
736 {
[1334]737 hdutype_ = FitsExtensionType_IMAGE;
[1300]738 GetImageParameters (fptr_, imageDataType_, naxis_, naxisn_);
[1234]739 nbData_ = 1;
740 int k;
741 for (k=0; k<naxis_; k++) if (naxisn_[k] > 0) nbData_ *= naxisn_[k];
742 KeywordsIntoDVList(fptr_, dvl_,hdunum_);
743 }
744 else
745 {
[1334]746 hdutype_ = FitsExtensionType_NULL;
747 KeywordsIntoDVList(fptr_, dvl_,hdunum_);
[1234]748 }
[839]749 }
[1234]750 else
[839]751 {
[1234]752 int hdutype;
753 fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
[1334]754
755 if( status )
[1234]756 {
[1334]757 if (status == END_OF_FILE)
758 {
759 hdutype_= FitsExtensionType_EOF;
760 status =0;
761 return;
762 }
763 else
764 {
[1771]765 cout << "WARNING (FitsInFile::getHeaderWithSophyaObject) : error during movabs" << endl;
[1334]766 hdutype_= FitsExtensionType_ERROR;
767 status =0;
768 return;
769 }
770 // printerror( status,":FitsInFile::getHeader : erreur movabs");
771 }
[2197]772
773
[1334]774 if(hdutype == IMAGE_HDU)
775 {
776 hdutype_= FitsExtensionType_IMAGE;
[1300]777 GetImageParameters (fptr_, imageDataType_, naxis_, naxisn_);
[1234]778 nbData_ = 1;
779 int k;
780 for (k=0; k<naxis_; k++) if (naxisn_[k] > 0) nbData_ *= naxisn_[k];
781 KeywordsIntoDVList(fptr_, dvl_,hdunum_);
782 }
[1334]783 else if(hdutype == ASCII_TBL)
[1234]784 {
[1334]785 hdutype_= FitsExtensionType_ASCII_TBL;
[1234]786 GetBinTabParameters(fptr_,nbcols_, nrows_,repeat_, noms_, types_, taille_des_chaines_);
787 KeywordsIntoDVList(fptr_, dvl_, hdunum_);
788 }
[1334]789 else if(hdutype == BINARY_TBL)
790 {
791 hdutype_= FitsExtensionType_BINARY_TBL;
792 GetBinTabParameters(fptr_,nbcols_, nrows_,repeat_, noms_, types_, taille_des_chaines_);
793 KeywordsIntoDVList(fptr_, dvl_, hdunum_);
794 }
795 else
796 {
797 hdutype_= FitsExtensionType_NULL;
798 KeywordsIntoDVList(fptr_, dvl_, hdunum_);
799 }
[2197]800
[839]801 }
[2197]802 if (hdutype_ == FitsExtensionType_BINARY_TBL || hdutype_ == FitsExtensionType_ASCII_TBL)
803 {
804 bfl_ = BufferLine(types_);
805 }
[971]806}
[839]807
[1136]808
[1234]809void FitsInFile::moveToFollowingHeader()
810{
811 int status = 0;
812 hdunum_++;
[1771]813 getHeaderWithSophyaObject();
[1334]814 if ( hdutype_ == FitsExtensionType_NULL )
815 {
816 cout << " WARNING (FitsInFile::ReadHeader) : no SOPHYA object on HDU number : " << hdunum_ << endl;
817
818 }
[1234]819}
[1218]820
821
822
[1234]823
824
[1218]825/*! \fn int SOPHYA::FitsInFile::NbColsFromFits() const
826\return number of columns (return 1 if IMAGE)
827*/
[1136]828int FitsInFile::NbColsFromFits() const
[839]829{
[1334]830 if(hdutype_ == FitsExtensionType_BINARY_TBL) return nbcols_;
[971]831 else
[1334]832 if(hdutype_ == FitsExtensionType_ASCII_TBL || hdutype_ == FitsExtensionType_IMAGE) return 1;
[839]833 else
834 {
[1379]835 cout << " hdutype= " << (int) hdutype_ << endl;
[1334]836 throw PException("FitsFile::NbColsFromFits, HDU not supported");
[839]837 }
838}
839
[1218]840/*! \fn int SOPHYA::FitsInFile::NentriesFromFits(int nocol) const
841\return number of data in the current IMAGE extension on FITS file, or number
842 of data of column number 'nocol' of the current BINTABLE extension
843*/
[1136]844int FitsInFile::NentriesFromFits(int nocol) const
[839]845{
[1334]846 if(hdutype_ == FitsExtensionType_BINARY_TBL) return nrows_*repeat_[nocol];
[1136]847 else
[1334]848 if(hdutype_ == FitsExtensionType_ASCII_TBL) return nrows_;
[1136]849 else
[1334]850 if(hdutype_ == FitsExtensionType_IMAGE) return nbData_;
[1136]851 else
[839]852 {
[1379]853 cout << "hdutype= " << (int) hdutype_ << endl;
[1334]854 throw PException("FitsFile::NentriesFromFits, this HDU is not supported");
[839]855 }
856}
857
[1218]858/*! \fn char SOPHYA::FitsInFile::ColTypeFromFits(int nocol) const
859
860return a character denoting data type of column number 'nocol' in a BINTABLE :
861
862D : double
863
864E : float
865
866I : integer
867
868S : character string
869
870 */
871
[1300]872FitsFile::FitsDataType FitsInFile::ColTypeFromFits(int nocol) const
[839]873{
[1334]874 if(hdutype_ != FitsExtensionType_ASCII_TBL && hdutype_ != FitsExtensionType_BINARY_TBL)
[839]875 {
[1136]876 throw IOExc("FitsFile::TypeFromFits, this HDU is not an ASCII table nor a binary table");
[839]877 }
[1136]878 return types_[nocol];
[839]879}
[1218]880
881
882/*! \fn string SOPHYA::FitsInFile::ColNameFromFits(int nocol) const
883
884\return name of the column number 'nocol' of the current BINTABLE extension
885 */
886
[1136]887string FitsInFile::ColNameFromFits(int nocol) const
[839]888{
[1334]889 if(hdutype_ != FitsExtensionType_ASCII_TBL && hdutype_ != FitsExtensionType_BINARY_TBL)
[1045]890 {
[1136]891 throw IOExc("FitsFile::TypeFromFits, this HDU is not an ASCII table nor a binary table");
[1045]892 }
[1136]893 return noms_[nocol];
[839]894}
895
[1218]896/*! \fn int DSOPHYA::FitsInFile::ColStringLengthFromFits(int nocol) const
897
898 \return number of characters of each data for the column number 'nocol' (if char* typed) of the current BINTABLE extension
899*/
900
[1136]901int FitsInFile::ColStringLengthFromFits(int nocol) const
[839]902{
[1334]903 if(hdutype_ != FitsExtensionType_ASCII_TBL && hdutype_ != FitsExtensionType_BINARY_TBL)
[1136]904 {
905 throw IOExc("FitsFile::TypeFromFits, this HDU is not an ASCII table nor a binary table");
906 }
907 int index=-1;
908 int k;
909 for (k=0; k<=nocol; k++)
910 {
[1300]911 if (types_[k] == FitsDataType_char) index++;
[1136]912 }
913 return taille_des_chaines_[index];
[839]914}
[1218]915
[2197]916const FitsFile::BufferLine& FitsInFile::GetBufferLine(long NoLine)
917{
918 int status= 0;
919 int anynul;
920 double dnull= dnull_;
921 float fnull= fnull_;
922 int inull= inull_;
923 char* cnull= const_cast<char*>(cnull_.c_str());
924 int ncol;
925 long nels=1;
926 double dval;
927 float fval;
928 int ival;
[1218]929
[2197]930 // pas d'entier de longueur superieure a 32 bits, pour cfitsio
931 int lval;
[1218]932
[2197]933 unsigned char usval;
934 int rang = 0;
935 int ccount = 0;
936 for (ncol=0; ncol<nbcols_; ncol++)
937 {
938 rang = bfl_.identificateur()[ncol].second;
939 // cout << " fitsfile : relecture col " << ncol << " type " << bfl_.identificateur()[ncol].first << " rang " << rang << endl;
940 switch (bfl_.identificateur()[ncol].first)
941 {
942 case FitsDataType_double :
943 fits_read_col(fptr_,TDOUBLE,ncol+1,NoLine+1,1,1,&dnull, &dval,&anynul,&status);
944 bfl_.r_8Array(rang) = (r_8)dval;
945 break;
946 case FitsDataType_float :
947 fits_read_col(fptr_,TFLOAT,ncol+1,NoLine+1,1,1,&fnull,&fval,&anynul,&status);
948 bfl_.r_4Array(rang) = (r_4)fval;
949 break;
950 case FitsDataType_short :
951 fits_read_col(fptr_,TSHORT,ncol+1,NoLine+1,1,1,&inull,&ival, &anynul,&status);
952 bfl_.int_2Array(rang) = (int_2)ival;
953 break;
954 case FitsDataType_int :
955 fits_read_col(fptr_,TINT,ncol+1,NoLine+1,1,1,&inull,&ival, &anynul,&status);
956 bfl_.int_4Array(rang) = (int_4)ival;
957 break;
958 case FitsDataType_long :
959 fits_read_col(fptr_,TLONG,ncol+1,NoLine+1,1,1,&inull,&lval, &anynul,&status);
960 bfl_.int_8Array(rang) = (int_8)lval;
961 break;
962 case FitsDataType_byte :
963 fits_read_col(fptr_,TBYTE,ncol+1,NoLine+1,1,1,&inull, &usval, &anynul,&status);
964 bfl_.u_charArray(rang) = usval;
965 break;
966 case FitsDataType_char :
967 char* chaine = new char[taille_des_chaines_[ccount++]];
968 fits_read_col(fptr_,TSTRING,ncol+1,NoLine+1,1,1,cnull,&chaine,&anynul,&status);
969 bfl_.stringArray(rang) = string(chaine);
970 break;
971 }
972 if (status)
973 {
974 ResetStatus(status);
975 break;
976 }
977 }
978 // cout << " fitsfile : ligne relue " << endl;
979 // bfl_.Print();
980 return bfl_;
981}
982
983
984
[1218]985/*! \fn void SOPHYA::FitsInFile::GetBinTabLine(int NoLine, double* ddata, float* fdata, int* idata, char ** cdata)
986
987Get the NoLine-th 'line' from the current BINTABLE extension on FITS file,
988 */
989
[1193]990void FitsInFile::GetBinTabLine(int NoLine, double* ddata, float* fdata, int* idata, char ** cdata)
[839]991{
992 int status= 0;
[1978]993 int anynul;
994 double dnull= dnull_;
995 float fnull= fnull_;
996 int inull= inull_;
997 char* cnull= const_cast<char*>(cnull_.c_str());
[1136]998 int dcount = 0.;
999 int fcount = 0.;
1000 int icount = 0;
1001 int ccount =0;
1002 int ncol;
1003 long nels=1;
[1499]1004 int ligneAsolue = NoLine+1;
[1136]1005 for (ncol=0; ncol<nbcols_; ncol++)
[861]1006 {
[1499]1007 int repetition =repeat_[ncol];
1008 int ligneALire = ligneAsolue/repetition;
1009 int premierElement = ligneAsolue-ligneALire*repetition;
1010 if (premierElement != 0 )
1011 {
1012 ligneALire++;
1013 }
1014 else premierElement = repetition;
1015
[1136]1016 switch (types_[ncol])
1017 {
[1300]1018 case FitsDataType_double :
[1499]1019 {
[1978]1020 fits_read_col(fptr_,TDOUBLE,ncol+1,ligneALire,premierElement,1,&dnull,&ddata[dcount++],&anynul,&status);
[1136]1021 break;
[1499]1022 }
[2197]1023 case FitsDataType_float :
1024 {
1025 fits_read_col(fptr_,TFLOAT,ncol+1,ligneALire,premierElement,1,&fnull,&fdata[fcount++],&anynul,&status);
1026 break;
1027 }
[1300]1028 case FitsDataType_int :
[2197]1029 {
1030 fits_read_col(fptr_,TINT,ncol+1,ligneALire,premierElement,1,&inull,&idata[icount++],
[1978]1031 &anynul,&status);
[2197]1032 break;
1033 }
[1499]1034 case FitsDataType_long :
[2197]1035 {
1036 fits_read_col(fptr_,TLONG,ncol+1,ligneALire,premierElement,1,&inull,&idata[icount++], &anynul,&status);
1037 break;
1038 }
[1499]1039 case FitsDataType_byte :
1040 {
1041 unsigned char uschar = 0;
[1978]1042 fits_read_col(fptr_,TBYTE,ncol+1,ligneALire,premierElement,1,&inull,&uschar, &anynul,&status);
[1499]1043 idata[icount++] = (int)uschar;
[2197]1044 break;
[1499]1045 }
[1300]1046 case FitsDataType_char :
[2197]1047 {
1048 fits_read_col(fptr_,TSTRING,ncol+1,ligneALire,premierElement,1,cnull,&cdata[ccount++],&anynul,&status);
1049 break;
1050 }
1051 default:
1052 {
1053 throw PException(" FitsInFile::GetBinTabLine : unsupported FITS data type");
1054 }
[1136]1055 }
1056 if (status)
1057 {
1058 ResetStatus(status);
1059 break;
1060 }
[861]1061 }
[903]1062}
[839]1063
[1218]1064/*! \fn void SOPHYA::FitsInFile::GetBinTabLine(long NoLine, BnTblLine& ligne)
1065Get the NoLine-th 'line' from the current BINTABLE extension on FITS file,
1066*/
[1193]1067void FitsInFile::GetBinTabLine(long NoLine, BnTblLine& ligne)
1068{
1069 int status= 0;
[1978]1070 int anynul;
1071 double dnull= dnull_;
1072 float fnull= fnull_;
1073 int inull= inull_;
1074 char* cnull= const_cast<char*>(cnull_.c_str());
[1193]1075 int dcount = 0.;
1076 int fcount = 0.;
1077 int icount = 0;
[2233]1078 int lcount = 0;
1079 int bcount = 0;
[1193]1080 int ccount =0;
1081 int ncol;
1082 long nels=1;
1083 for (ncol=0; ncol<nbcols_; ncol++)
1084 {
1085 switch (types_[ncol])
1086 {
[1300]1087 case FitsDataType_double :
[2197]1088 {
1089 fits_read_col(fptr_,TDOUBLE,ncol+1,NoLine+1,1,1,&dnull,&ligne.ddata_[dcount++],&anynul,&status);
1090 break;
1091 }
[1300]1092 case FitsDataType_float :
[2197]1093 {
1094 fits_read_col(fptr_,TFLOAT,ncol+1,NoLine+1,1,1,&fnull,&ligne.fdata_[fcount++],&anynul,&status);
1095 break;
1096 }
[1300]1097 case FitsDataType_int :
[2197]1098 {
1099 fits_read_col(fptr_,TINT,ncol+1,NoLine+1,1,1,&inull,&ligne.idata_[icount++], &anynul,&status);
1100 break;
1101 }
[1359]1102 case FitsDataType_long :
[2197]1103 {
[2233]1104 fits_read_col(fptr_,TLONG,ncol+1,NoLine+1,1,1,&inull,&ligne.ldata_[lcount++], &anynul,&status);
[2197]1105 break;
1106 }
[1359]1107 case FitsDataType_byte :
[2197]1108 {
[2233]1109 fits_read_col(fptr_,TBYTE,ncol+1,NoLine+1,1,1,&inull,&ligne.bdata_[bcount++], &anynul,&status);
[2197]1110 break;
1111 }
[1300]1112 case FitsDataType_char :
[2197]1113 {
1114 char* chaine = new char[taille_des_chaines_[ccount]];
1115 fits_read_col(fptr_,TSTRING,ncol+1,NoLine+1,1,1,cnull,&chaine,&anynul,&status);
1116 ligne.cdata_[ccount++] = string(chaine);
1117 break;
1118 }
1119 default:
1120 {
1121 throw PException(" FitsInFile::GetBinTabLine : unsupported FITS data type");
1122 }
[1193]1123 }
1124 if (status)
1125 {
1126 ResetStatus(status);
1127 break;
1128 }
1129 }
1130}
1131
[2197]1132
1133
[1218]1134/*! \fn void SOPHYA::FitsInFile::GetBinTabLine(int NoLine, float* fdata)
1135
1136Get the NoLine-th float 'line' from the current BINTABLE extension on FITS file,
1137*/
[1136]1138void FitsInFile::GetBinTabLine(int NoLine, float* fdata)
[903]1139{
[1136]1140 int status= 0;
[1978]1141 int anynul;
1142 float fnull= fnull_;
[1136]1143 long nels=1;
1144 int ncol;
1145 for (ncol=0; ncol<nbcols_; ncol++)
[861]1146 {
[1978]1147 fits_read_col(fptr_,TFLOAT,ncol+1,NoLine+1,1,1,&fnull,&fdata[ncol],&anynul,&status);
[1136]1148 if (status)
[903]1149 {
[1136]1150 ResetStatus(status);
1151 break;
[903]1152 }
[1136]1153 }
1154}
[839]1155
[2907]1156/*!
1157Get the NoLine-th float 'line' from the current BINTABLE extension on FITS file,
1158*/
1159void FitsInFile::GetBinTabLine(int NoLine, double* ddata)
1160{
1161 int status= 0;
1162 int anynul;
1163 double dnull= fnull_;
1164 long nels=1;
1165 int ncol;
1166 for (ncol=0; ncol<nbcols_; ncol++)
1167 {
1168 fits_read_col(fptr_, TDOUBLE, ncol+1,NoLine+1,1,1,&dnull,&ddata[ncol],&anynul,&status);
1169 if (status)
1170 {
1171 ResetStatus(status);
1172 break;
1173 }
1174 }
1175}
[903]1176
[2907]1177
[1218]1178/*! \fn void SPOPHYA::FitsInFile::GetBinTabFCol(double* valeurs,int nentries, int NoCol) const
1179
1180fill the array 'valeurs' with double data from the current BINTABLE extension on FITS file, from column number 'NoCol'
1181
1182\param <nentries> number of data to be read
1183*/
[1379]1184void FitsInFile::GetBinTabFCol(r_8* valeurs,int nentries, int NoCol) const
[839]1185 {
1186 int status= 0;
1187 int DTYPE;
1188 long repeat,width;
1189 fits_get_coltype(fptr_, NoCol+1,&DTYPE,&repeat,&width,&status);
1190 if( DTYPE != TDOUBLE)
1191 {
[1045]1192 if (DTYPE == TFLOAT) cout << " WARNING: reading double from float : conversion will be made by fitsio library" << endl;
1193 else
1194 throw IOExc("FitsFile::GetBinTabFCol, tentative de lecture non double");
[839]1195 }
1196 long nels=nentries;
[1978]1197 int anynul;
1198 double dnull= dnull_;
1199
[839]1200 fits_read_col(fptr_,TDOUBLE,NoCol+1,1,1,nels,&dnull,valeurs,
[1978]1201 &anynul,&status);
[1703]1202 if( status )
1203 {
1204 printerrorAndContinue( status,"erreur lecture de colonne" );
1205 }
[839]1206 }
1207
[1218]1208/*! \fn void SOPHYA::FitsInFile::GetBinTabFCol(float* valeurs,int nentries, int NoCol) const
1209
1210 same as previous method with float data
1211*/
[1379]1212void FitsInFile::GetBinTabFCol(r_4* valeurs,int nentries, int NoCol) const
[839]1213 {
1214 int status= 0;
1215 int DTYPE;
1216 long repeat,width;
1217 fits_get_coltype(fptr_, NoCol+1,&DTYPE,&repeat,&width,&status);
1218 if( DTYPE != TFLOAT)
1219 {
[1045]1220 if (DTYPE == TDOUBLE) cout << " WARNING: reading float from double : conversion will be made by fitsio library" << endl;
1221 else
1222 throw IOExc("FitsFile::GetBinTabFCol, tentative de lecture non float");
[839]1223 }
1224 long nels=nentries;
[1978]1225 int anynul;
1226 float fnull= fnull_;
[839]1227 fits_read_col(fptr_,TFLOAT,NoCol+1,1,1,nels,&fnull,valeurs,
[1978]1228 &anynul,&status);
[1703]1229 if( status ) printerrorAndContinue( status,"erreur lecture de colonne" );
[839]1230 }
[1136]1231
[1218]1232/*! \fn void SOPHYA::FitsInFile::GetBinTabFCol(int* valeurs,int nentries, int NoCol) const
1233
1234 same as previous method with int data
1235*/
1236
[1379]1237void FitsInFile::GetBinTabFCol(int_4* valeurs,int nentries, int NoCol) const
[839]1238 {
1239 int status= 0;
1240 int DTYPE;
1241 long repeat,width;
1242 fits_get_coltype(fptr_, NoCol+1,&DTYPE,&repeat,&width,&status);
[1752]1243 if( DTYPE != TLONG && DTYPE != TINT)
[839]1244 {
[1752]1245 throw IOExc("FitsFile::GetBinTabFCol, probleme de lecture d'entiers");
[839]1246 }
1247 long nels=nentries;
[1978]1248 int anynul;
1249 int inull= inull_;
[1752]1250
1251
1252
1253 // voir commentaire dans putColToFits()
[839]1254 fits_read_col(fptr_,TINT,NoCol+1,1,1,nels,&inull,valeurs,
[1978]1255 &anynul,&status);
[1703]1256 if( status ) printerrorAndContinue( status,"erreur lecture de colonne" );
[839]1257 }
[1136]1258
[1218]1259/*! \fn void SOPHYA::FitsInFile::GetBinTabFCol(char** valeurs, int nentries, int NoCol) const
1260
1261 same as previous method with char* data
1262*/
1263
[1136]1264void FitsInFile::GetBinTabFCol(char** valeurs, int nentries, int NoCol) const
[839]1265 {
1266 int status= 0;
1267 int DTYPE;
1268 long repeat,width;
1269 fits_get_coltype(fptr_, NoCol+1,&DTYPE,&repeat,&width,&status);
[1300]1270 if( DTYPE != TSTRING && DTYPE != TBYTE)
[839]1271 {
[1300]1272 throw IOExc("FitsFile::GetBinTabFCol, tentative de lecture non string");
[839]1273 }
1274 long nels=nentries;
[1978]1275 int anynul;
1276 char* cnull= const_cast<char*>(cnull_.c_str());
[839]1277 long frow=1;
1278 long felem=1;
1279 fits_read_col(fptr_,TSTRING,NoCol+1,frow,felem,nels,cnull,valeurs,
[1978]1280 &anynul,&status);
[1703]1281 if( status ) printerrorAndContinue( status,"erreur lecture de colonne" );
[839]1282 }
[1045]1283
[1218]1284/*! \fn void SOPHYA::FitsInFile::GetSingleColumn(double* map, int nentries) const
1285fill the array 'map' with double data from the current extension on FITS file.
1286If the extension is BINTABLE, the first column is provided.
1287
1288\param <nentries> number of data to be read
1289*/
[1379]1290void FitsInFile::GetSingleColumn(r_8* map, int nentries) const
[1136]1291{
1292 int status = 0;
[1334]1293 if(hdutype_ == FitsExtensionType_IMAGE)
[1045]1294 {
[1136]1295
[1300]1296 if(imageDataType_ != FitsDataType_double)
[1047]1297 {
[1136]1298 cout << " The data type on fits file is not double...";
1299 cout << " Conversion to double achieved by cfitsio lib" << endl;
[1047]1300 }
[1136]1301
[1978]1302 int anynul;
1303 double dnull= dnull_;
[1136]1304
1305 long nels= nentries;
[1978]1306 fits_read_img(fptr_,TDOUBLE,1,nels,&dnull,map,&anynul,&status);
[1136]1307 if( status ) printerror( status );
[1045]1308 }
[1136]1309 else
[1334]1310 if(hdutype_ == FitsExtensionType_ASCII_TBL || hdutype_ == FitsExtensionType_BINARY_TBL)
[1136]1311 {
1312 GetBinTabFCol(map,nentries, 0);
1313 }
1314 else
1315 {
[1379]1316 cout << " hdutype= " << (int) hdutype_ << endl;
[1334]1317 throw IOExc("FitsFile::GetSingleColumn, this HDU is unknown");
[1136]1318 }
[1045]1319}
1320
[1218]1321/*! \fn void SOPHYA::FitsInFile::GetSingleColumn(float* map, int nentries) const
1322same as above with float data
1323*/
[1379]1324void FitsInFile::GetSingleColumn(r_4* map, int nentries) const
[1045]1325{
[1136]1326 int status = 0;
[1334]1327 if(hdutype_ == FitsExtensionType_IMAGE)
[1045]1328 {
[1300]1329 if(imageDataType_ != FitsDataType_float)
[1047]1330 {
[1136]1331 cout << " The data type on fits file is not float ";
1332 cout << " Conversion to float achieved by cfitsio lib" << endl;
[1047]1333 }
[1978]1334 int anynul;
1335 float fnull= fnull_;
[1136]1336
1337 long nels= nentries;
[1978]1338 fits_read_img(fptr_,TFLOAT,1,nels,&fnull, map,&anynul,&status);
[1136]1339 if( status ) printerror( status );
[1045]1340 }
[839]1341 else
[1334]1342 if(hdutype_ == FitsExtensionType_ASCII_TBL || hdutype_ == FitsExtensionType_BINARY_TBL)
[1136]1343 {
1344 GetBinTabFCol(map,nentries, 0);
1345 }
[839]1346 else
1347 {
[1379]1348 cout << " hdutype= " << (int) hdutype_ << endl;
[1136]1349 throw IOExc("FitsFile::GetSingleColumn this HDU is unknown");
[839]1350 }
1351}
1352
[1218]1353/*! \fn void SOPHYA::FitsInFile::GetSingleColumn( int* map, int nentries) const
1354 same as above with int data
1355*/
[1379]1356void FitsInFile::GetSingleColumn( int_4* map, int nentries) const
[839]1357{
[1136]1358 int status = 0;
[1334]1359 if(hdutype_ == FitsExtensionType_IMAGE)
[839]1360 {
[1300]1361 if(imageDataType_ != FitsDataType_int)
[1136]1362 {
1363 cout << " The data type on fits file is not int ";
1364 cout << " Conversion to float achieved by cfitsio lib" << endl;
1365 }
[1978]1366 int anynul;
1367 float fnull= fnull_;
[1136]1368
1369 long nels= nentries;
[1978]1370 fits_read_img(fptr_,TINT,1,nels,&fnull,map,&anynul,&status);
[1136]1371 if( status ) printerror( status );
[839]1372 }
1373 else
[1334]1374 if(hdutype_ == FitsExtensionType_ASCII_TBL || hdutype_ == FitsExtensionType_BINARY_TBL)
[1136]1375 {
1376 GetBinTabFCol(map,nentries, 0);
1377 }
[839]1378 else
[1136]1379 {
[1379]1380 cout << " hdutype= " << (int) hdutype_ << endl;
[1136]1381 throw IOExc("FitsFile::GetSingleColumn this HDU is unknown");
1382 }
[839]1383}
1384
[1136]1385void FitsInFile::GetBinTabParameters(fitsfile* fileptr, int& nbcols, int& nrows,
[903]1386 vector<int>& repeat,
1387 vector<string>& noms,
[1300]1388 vector<FitsDataType>& types,
[903]1389 vector<int>& taille_des_chaines)
[839]1390{
1391 int status= 0;
[903]1392 int hdunum=0;
1393 int hdutype=0;
1394 fits_get_hdu_num(fileptr,&hdunum);
1395 fits_get_hdu_type(fileptr, &hdutype, &status);
1396
1397 if(hdutype != ASCII_TBL && hdutype != BINARY_TBL)
[839]1398 {
[903]1399 throw IOExc("FitsFile::GetBinTabParameters this HDU is not an ASCII table nor a binary table");
[839]1400 }
[1334]1401 // if(hdutype == ASCII_TBL)
1402 // cout << " Reading a FITS ascii table in HDU : " << hdunum << endl;
1403 // if(hdutype == BINARY_TBL)
1404 // cout << " Reading a FITS binary table in HDU : " << hdunum << endl;
[839]1405
1406 // get the number of columns
[903]1407 fits_get_num_cols(fileptr, &nbcols,&status);
[839]1408 if( status ) printerror( status );
1409
1410 // get the number of rows
1411 long naxis2= 0;
[903]1412 fits_get_num_rows(fileptr,&naxis2,&status);
[839]1413 if( status ) printerror( status );
[903]1414 nrows = (int)naxis2;
[839]1415
1416 // get the datatype, names and the repeat count
[903]1417 noms.clear();
1418 noms.reserve(nbcols);
1419 types.clear();
1420 types.reserve(nbcols);
1421 repeat.clear();
1422 repeat.reserve(nbcols);
1423 taille_des_chaines.clear();
[839]1424 char **ttype = new char*[nbcols];
[923]1425 int ii;
[1175]1426 //
1427 //
[923]1428 for (ii=0; ii < nbcols; ii++) ttype[ii]=new char[FLEN_VALUE];
[839]1429 int nfound;
[903]1430 fits_read_keys_str(fileptr, "TTYPE",1,nbcols,ttype,&nfound, &status);
[839]1431 if( status ) printerror( status,"erreur lecture des noms de colonne");
1432 int rept=0;
[1300]1433 if(hdutype == ASCII_TBL)
[839]1434 {
[1300]1435 for(ii = 0; ii < nbcols; ii++)
[839]1436 {
[1300]1437 int DTYPE;
1438 long width;
1439 long repete = 0;
1440 fits_get_coltype(fileptr,ii+1,&DTYPE,&repete,&width,&status);
1441 if( status ) printerror( status,"erreur lecture type de colonne");
1442 rept = repete;
1443 noms.push_back(string(ttype[ii]));
1444 switch (DTYPE)
1445 {
1446 case TDOUBLE :
1447 types.push_back(FitsDataType_double);
1448 break;
1449 case TFLOAT :
1450 types.push_back(FitsDataType_float);
1451 break;
1452 case TLONG :
[1359]1453 types.push_back(FitsDataType_long);
[1300]1454 break;
[2197]1455 case TINT :
[1300]1456 types.push_back(FitsDataType_int);
1457 break;
[2197]1458 case TSHORT :
1459 types.push_back(FitsDataType_short);
1460 break;
[1300]1461 case TSTRING :
1462 types.push_back(FitsDataType_char);
1463 taille_des_chaines.push_back(width);
1464 rept/=width;
1465 break;
1466 default :
1467 cout << " field " << ii+1 << " DTYPE= " << DTYPE << endl;
1468 throw IOExc("FitsFile::GetBinTabParameters, unsupported data type of field, for ASCII table");
1469 }
1470 repeat.push_back(rept);
[839]1471 }
[1136]1472 }
[1300]1473 else
1474 {
1475 for(ii = 0; ii < nbcols; ii++)
1476 {
1477 int DTYPE;
1478 long width;
1479 long repete = 0;
1480 fits_get_coltype(fileptr,ii+1,&DTYPE,&repete,&width,&status);
1481 if( status ) printerror( status,"erreur lecture type de colonne");
1482 rept = repete;
1483 noms.push_back(string(ttype[ii]));
1484 switch (DTYPE)
1485 {
1486 case TDOUBLE :
1487 types.push_back(FitsDataType_double);
1488 break;
1489 case TFLOAT :
1490 types.push_back(FitsDataType_float);
1491 break;
1492 case TLONG :
[1359]1493 types.push_back(FitsDataType_long);
[1300]1494 break;
1495 case TINT :
1496 types.push_back(FitsDataType_int);
1497 break;
1498 case TSHORT :
[2197]1499 types.push_back(FitsDataType_short);
[1300]1500 break;
1501 case TSTRING :
1502 types.push_back(FitsDataType_char);
1503 taille_des_chaines.push_back(width);
1504 rept/=width;
1505 break;
1506 case TBYTE :
[1359]1507 types.push_back(FitsDataType_byte);
[1300]1508 break;
1509 default :
1510 cout << " field " << ii+1 << " DTYPE= " << DTYPE << endl;
1511 throw IOExc("FitsFile::GetBinTabParameters, unsupported data type of field, for BINTABLE");
1512 }
1513 repeat.push_back(rept);
1514 }
1515 }
[1136]1516 for (ii=0; ii < nbcols; ii++) delete [] ttype[ii];
1517 delete [] ttype;
1518}
1519
1520void FitsInFile::KeywordsIntoDVList(fitsfile* fileptr, DVList& dvl, int hdunum)
1521{
1522 int status = 0;
1523 int hdutype;
1524 fits_movabs_hdu(fileptr,hdunum,&hdutype,&status);
1525 if( status ) printerror( status,":KeywordsIntoDVList : erreur movabs");
1526 // get number of keywords
1527 int nkeys,keypos;
1528 fits_get_hdrpos(fileptr,&nkeys,&keypos,&status);
1529 if( status ) printerror( status );
1530
1531 // put keywords in a DVList object
1532 char keyname[LEN_KEYWORD]= "";
1533 char strval[FLEN_VALUE]= "";
1534 char dtype;
1535 char card[FLEN_CARD];
1536 char *comkey = "COMMENT";
[1143]1537 char comment[FLEN_COMMENT];
[1136]1538
1539 // shift with the number of mandatory keywords
[1143]1540 // int num= 8;
1541 int num= 0;
1542 // primary header
1543 if (hdunum == 1)
1544 {
1545 // read NAXIS
1546 int naxis=0;
1547 fits_read_key(fileptr,TINT,"NAXIS",&naxis,NULL,&status);
1548 // number of mandatory keywords
1549 num = naxis+3;
1550 }
1551 // extensions
1552 else
1553 {
1554 if (hdutype == IMAGE_HDU)
1555 {
1556 // read NAXIS
1557 int naxis=0;
1558 fits_read_key(fileptr,TINT,"NAXIS",&naxis,NULL,&status);
1559 // number of mandatory keywords
1560 num = naxis+5;
1561 }
1562 else
1563 if(hdutype == ASCII_TBL || hdutype == BINARY_TBL)
1564 {
1565 // number of mandatory keywords
1566 num = 8;
1567 }
1568 }
[1136]1569 int j;
1570 for(j = num+1; j <= nkeys; j++)
1571 {
1572 fits_read_keyn(fileptr,j,card,strval,NULL,&status);
1573 if(status) printerror(status);
1574
1575 strncpy(keyname,card,LEN_KEYWORD-1);
1576 if(strncmp(keyname,comkey,LEN_KEYWORD-1) != 0 && strlen(keyname) != 0
1577 && strlen(strval) != 0)
1578 {
1579 fits_get_keytype(strval,&dtype,&status);
1580 if(status) printerror(status);
1581
1582 strip(keyname, 'B',' ');
1583 strip(strval, 'B',' ');
1584 strip(strval, 'B','\'');
1585
1586 switch( dtype )
1587 {
1588 case 'C':
[1143]1589 fits_read_key(fileptr,TSTRING,keyname,strval,comment,&status);
[1978]1590 if ( strncmp(keyname,"TTYPE",5) == 0 ||
1591 strncmp(keyname,"TFORM",5) == 0 ||
1592 strncmp(keyname,"TBCOL",5) == 0 ) break;
[1143]1593 dvl[keyname]= strval;
1594 dvl.SetComment(keyname, comment);
[1136]1595 break;
1596 case 'I':
1597 int ival;
[1143]1598 fits_read_key(fileptr,TINT,keyname,&ival,comment,&status);
[1136]1599 dvl[keyname]= (int_4) ival; // Portage mac DY
[1143]1600 dvl.SetComment(keyname, comment);
[1136]1601 break;
1602 case 'L':
1603 int ilog;
[1143]1604 fits_read_key(fileptr,TLOGICAL,keyname,&ilog,comment,&status);
[1136]1605 dvl[keyname]= (int_4) ilog;
[1143]1606 dvl.SetComment(keyname, comment);
[1136]1607 break;
1608 case 'F':
1609 double dval;
[1143]1610 fits_read_key(fileptr,TDOUBLE,keyname,&dval,comment,&status);
[1136]1611 dvl[keyname]= dval;
[1143]1612 dvl.SetComment(keyname, comment);
[1136]1613 break;
1614 }
1615
1616 }
[839]1617 }
[1978]1618 // dvl.Print();
[1136]1619}
1620
[1218]1621
1622/*!
1623 \class SOPHYA::FitsOutFile
[1371]1624 \ingroup FitsIOServer
[1218]1625 Class for loading SOPHYA objects from FITS Format Files (uses cfitsio lib)
1626*/
1627
[1136]1628FitsOutFile::FitsOutFile()
[2860]1629 : FitsFile()
[1136]1630{
[1193]1631 InitNull();
[903]1632}
[839]1633
[1218]1634 /*! \fn SOPHYA::FitsOutFile::FitsOutFile(char flnm[], WriteMode wrm)
1635
1636\param <WriteMode> enum , WriteMode = clear -> if alreadyy exists, the file will be overwritten (else created) ; WriteMode = append -> further objects will be appended to the file if it exists (else : file created). WriteMode = unknown -> file created if does not exist, else : exception. (the last situation is the default)
1637
1638 */
[1231]1639
1640FitsOutFile::FitsOutFile(string const & flnm, WriteMode wrm)
[2860]1641 : FitsFile()
[1136]1642{
[1231]1643 InitNull();
1644 openoutputfitsfile(flnm.c_str(), wrm);
1645}
[839]1646
[1231]1647FitsOutFile::FitsOutFile(const char * flnm, WriteMode wrm)
[2860]1648 : FitsFile()
[1231]1649{
[1136]1650 InitNull();
[1231]1651 openoutputfitsfile(flnm, wrm);
1652}
1653
[2860]1654FitsOutFile::FitsOutFile(FitsInOutFile const& fios)
1655 : FitsFile(fios)
1656{
1657 InitNull();
1658 if (mode_ == Fits_RO)
1659 throw FitsIOException("FitsOutFile::FitsOutFile(FitsInOutFile const& ) ReadOnly Fits file");
1660}
1661
1662FitsOutFile::~FitsOutFile()
1663{
1664 if (dvlToPrimary_ != NULL) delete dvlToPrimary_;
1665}
1666
[1231]1667void FitsOutFile::openoutputfitsfile(const char * flnm, WriteMode wrm)
1668{
[1136]1669 int status = 0;
[839]1670
[1136]1671 // create new FITS file
[1183]1672 fits_create_file(&fptr_,flnm,&status);
[2860]1673 if( status ) {
1674 switch (wrm) {
1675 // si on veut ecrire a la fin de ce fichier
1676 case append :
1677 status = 0;
1678 fits_clear_errmsg();
1679 fits_open_file(&fptr_,flnm,READWRITE,&status);
1680 if( status ) {
1681 cout << " error opening file: " << flnm << endl;
1682 printerror(status, "failure opening a file supposed to exist");
1683 }
1684 else cout << " file " << flnm << " opened, new objects will be appended " << endl;
1685 fits_get_num_hdus(fptr_, &hdunum_, &status);
1686 int hdutype;
1687 fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
1688 if( status ) {
1689 printerror( status,":FitsFile::WriteF : erreur movabs");
1690 throw FitsIOException("FitsOutFile::openoutputfitsfile()/fits movabs error");
1691 break;
1692
1693 case clear :
[1193]1694 {
[1183]1695 status = 0;
[1235]1696 fits_clear_errmsg();
[2860]1697 char* newname = new char[strlen(flnm)+2];
1698 //
1699 newname[0] = '!';
1700 newname[1] = '\0';
1701 strcat(newname, flnm);
1702 fits_create_file(&fptr_,newname,&status);
1703 delete [] newname;
1704 if (status) {
1705 cout << " error opening file: " << flnm << endl;
1706 printerror(status, "unable to open file, supposed to exist");
1707 throw FitsIOException("FitsOutFile::openoutputfitsfile()/fits open Error ");
[1183]1708 }
[2860]1709 else cout << " WARNING : file " << flnm << " is overwritten " << endl;
[1193]1710 break;
1711 }
[2860]1712 case unknown :
1713 printerror(status, " file seems already to exist");
1714 throw FitsIOException("FitsOutFile::openoutputfitsfile()/fits open Error - existing file");
1715 break;
1716 }
[1136]1717 }
[2860]1718 }
1719 fname_ = flnm;
1720 if ( wrm == append ) mode_ = Fits_RW;
1721 else mode_ = Fits_Create;
1722 ownfptr = true;
[1136]1723}
1724
1725
1726
[1218]1727/*! \fn void SOPHYA::FitsOutFile::makeHeaderImageOnFits(char type, int nbdim, int* naxisn, DVList &dvl)
1728
1729create an IMAGE header on FITS file.
1730\param <type> type of data (see method ColTypeFromFits)
1731\param <nbdim> number of dimensions : 1D, 2D, 3D etc. = NAXIS
1732\param <naxisn> array containind sizes of the different dimensions
1733*/
[1221]1734void FitsOutFile::makeHeaderImageOnFits(char type, int nbdim, int* naxisn, DVList* ptr_dvl)
[1136]1735{
1736 int status = 0;
1737 long naxis = nbdim;
1738 long* naxes = new long[nbdim];
[1246]1739 bool hdunfirst= (hdunum_ == 0);
1740 if (hdunfirst)
[1136]1741 {
[1143]1742 if (imageOnPrimary_ == false)
1743 {
[1234]1744 hdunum_ = 1;
[1143]1745 fits_create_img(fptr_,FLOAT_IMG,0,naxes,&status);
[1246]1746 }
[1136]1747 }
1748 int k;
1749 for (k=0; k< nbdim; k++) naxes[k] = (long)naxisn[k];
1750 if (type == 'D')
1751 fits_create_img(fptr_,DOUBLE_IMG,naxis,naxes,&status);
1752 else
1753 if (type == 'E')
1754 fits_create_img(fptr_,FLOAT_IMG,naxis,naxes,&status);
1755 else
1756 if (type == 'I')
1757 fits_create_img(fptr_,LONG_IMG,naxis,naxes,&status);
1758 else
1759 {
1760 cout << " type of data: " << type << endl;
1761 throw PException("FitsFile:::makeHeaderImageOnFits:unprogrammed type of data ");
1762 }
[1353]1763
[1246]1764 // on ajoute eventuellement un dvlist prepare et la doc SOPHYA
[1136]1765 hdunum_++;
[1246]1766 if (hdunfirst)
1767 {
1768 addDVListOnPrimary();
1769 writeSignatureOnFits(1);
1770 }
[1143]1771
[1353]1772 // header format FITS
1773
1774 writeAppendedHeaderOnFits();
1775
1776 // write supplementary keywords (from SOPHYA)
[1143]1777 // dvl.Print();
[1221]1778 if (ptr_dvl != NULL) addKeywordsOfDVList(*ptr_dvl);
[1143]1779
[1136]1780 delete [] naxes;
1781 if( status ) printerror( status, "erreur creation HDU IMAGE" );
1782
1783}
[1218]1784
1785
1786/*! \fn void SOPHYA::FitsOutFile::PutImageToFits(int nbData, double* map) const
1787
1788write double data from array 'map'on an IMAGE extension
1789\param <nbData> number of data to be written
1790*/
[1379]1791void FitsOutFile::PutImageToFits(int nbData, r_8* map) const
[1136]1792{
1793 int status = 0;
1794 long npix= nbData;
1795 fits_write_img(fptr_,TDOUBLE,1,npix,map,&status);
[1209]1796 if( status ) printerror( status, "erreur ecriture PutImageToFits" );
[1136]1797}
1798
[1218]1799/*! \fn void SOPHYA::FitsOutFile::PutImageToFits(int nbData, float* map) const
1800
1801same as previous method with float data
1802*/
[1379]1803void FitsOutFile::PutImageToFits(int nbData, r_4* map) const
[1136]1804{
1805 int status = 0;
1806 long npix= nbData;
1807 fits_write_img(fptr_,TFLOAT,1,npix, map,&status);
[1209]1808 if( status ) printerror( status, "erreur ecriture PutImageToFits" );
[1136]1809
1810}
[1218]1811
1812 /*! \fn void SOPHYA::FitsOutFile::PutImageToFits( int nbData, int* map) const
1813
1814 same as previous method with int data */
[1379]1815void FitsOutFile::PutImageToFits( int nbData, int_4* map) const
[1136]1816{
1817 int status = 0;
1818
1819 long npix= nbData;
1820 fits_write_img(fptr_,TINT,1,npix,map,&status);
[1209]1821 if( status ) printerror( status, "erreur ecriture PutImageToFits" );
[1136]1822}
1823
1824
1825
[1218]1826/*! \fn void SOPHYA::FitsOutFile::makeHeaderBntblOnFits( string fieldType, vector<string> Noms, int nentries, int tfields, DVList &dvl, string extname, vector<int> taille_des_chaines)
1827
1828create an BINTABLE header on FITS file.
1829\param <fieldType> array conta
1830ining characters denoting types of the different column (see method ColTypeFromFits)
1831\param <Noms> array of the names of columns
1832\param <nentries> number of data of each column
1833\param <tfields> number of columns
1834\param <dvl> a SOPHYA DVList containing keywords to be appended
1835\param <extname> keyword EXTNAME for FITS file
1836\param <taille_des_chaines> vector containing the number of characters of data for each char* typed column, with order of appearance in 'fieldType'
1837*/
[1300]1838void FitsOutFile::makeHeaderBntblOnFits(string fieldType, vector<string> Noms, int nentries, int tfields, DVList* ptr_dvl, string extname, vector<int> taille_des_chaines)
[839]1839{
[1209]1840 int k;
[839]1841 int status = 0;
1842 long nrows;
[1300]1843 // verifications de coherences
[1209]1844
[1193]1845 if (fieldType.length() != tfields)
[839]1846 {
[1193]1847 cout << " nombre de champs :" << tfields << "nombre de types: " << fieldType.length() << endl;
[1136]1848 throw ParmError("FitsFile:: fields and types don't match");
[839]1849
1850 }
[1209]1851 if (tfields > Noms.size())
1852 {
1853 cout << " WARNING: FitsOutFile::makeHeaderBntblOnFits, length of vector of column names not equal to total number of columns" << endl;
1854 for (k=0; k<(tfields-Noms.size()); k++) Noms.push_back( string(" "));
1855 }
1856
1857 // nombre de variables "chaines de caracteres"
1858 int nbString = 0;
1859 for (k=0; k<tfields;k++) if (fieldType[k] == 'A') nbString++;
1860 // coherence de la longueur du vecteur des tailles
1861 if (nbString > taille_des_chaines.size())
1862 {
1863 cout << " WARNING: FitsOutFile::makeHeaderBntblOnFits, length of vector of string lengths not equal to total number of columns" << endl;
1864 int strSz=0;
1865 for (k=0; k<taille_des_chaines.size(); k++) if ( taille_des_chaines[k] > strSz) strSz = taille_des_chaines[k];
1866 for (k=0; k<(nbString-taille_des_chaines.size()); k++) taille_des_chaines.push_back(strSz);
1867 }
[839]1868 char ** ttype= new char*[tfields];
1869 char ** tform= new char*[tfields];
1870 char largeur[FLEN_VALUE];
1871 int noColString=0;
[971]1872 for (k=0; k<tfields;k++)
[839]1873 {
1874 char format[FLEN_VALUE];
1875
1876 if(nentries < 1024)
1877 {
1878 nrows= nentries;
1879 if (fieldType[k] == 'A')
1880 {
1881 sprintf(largeur,"%d",taille_des_chaines[noColString++]);
1882 strcpy(format,largeur);
1883 }
1884 else strcpy(format,"1");
1885 }
1886 else
1887 {
1888 nrows = nentries/1024;
1889 if(nentries%1024 != 0) nrows++;
1890 if (fieldType[k] == 'A')
1891 {
[1136]1892 char largaux[FLEN_VALUE];
1893 sprintf(largeur,"%d",taille_des_chaines[noColString]);
1894 sprintf(largaux,"%d",1024*taille_des_chaines[noColString]);
1895 noColString++;
1896 strcpy(format, largaux);
[839]1897 }
1898 else strcpy(format,"1024");
1899 }
1900 strncat(format,&fieldType[k],1);
1901 if (fieldType[k] == 'A')
1902 {
1903 strcat(format,largeur);
1904 }
[1193]1905 ttype[k] = const_cast<char*>(Noms[k].c_str());
[839]1906 tform[k]= new char[FLEN_VALUE];
1907 strcpy(tform[k],format);
1908 }
[1193]1909 char* extn = const_cast<char*>(extname.c_str());
[839]1910
1911 // create a new empty binary table onto the FITS file
1912 // physical units if they exist, are defined in the DVList object
1913 // so the NULL pointer is given for the tunit parameters.
1914 nrows=0;
1915 fits_create_tbl(fptr_,BINARY_TBL,nrows,tfields,ttype,tform,
1916 NULL,extn,&status);
1917 if( status ) printerror( status );
[1353]1918
1919 int ii;
1920 for(ii = 0; ii < tfields; ii++)
1921 {
1922 delete [] tform[ii];
1923 }
1924 delete [] ttype;
1925 delete [] tform;
1926
1927 // on ajoute eventuellement des mots-cles
1928
[1246]1929 if ( hdunum_ == 0 )
1930 {
1931 hdunum_ = 2;
1932 addDVListOnPrimary();
1933 writeSignatureOnFits(1);
1934 }
[1026]1935 else hdunum_++;
[1353]1936
1937 // header format FITS
1938
1939 writeAppendedHeaderOnFits();
1940
1941 // write SOPHYA keywords
[1221]1942 if (ptr_dvl != NULL) addKeywordsOfDVList(*ptr_dvl);
[839]1943}
1944
[1353]1945
1946
[1218]1947/*! \fn void SOPHYA::FitsOutFile::PutColToFits(int nocol, int nentries, double* donnees) const
1948
1949write double data from array 'donnees ' on column number 'nocol' of a BINTABLE extension.
1950\param <nentries> number of data to be written
1951*/
[1353]1952
[1379]1953void FitsOutFile::PutColToFits(int nocol, int nentries, r_8* donnees) const
[839]1954{
1955 int status = 0;
[971]1956 int hdutype;
[839]1957 fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
[1209]1958 if( status ) printerror(status,"PutColToFits: le movabs a foire");
[839]1959 fits_get_hdu_type(fptr_, &hdutype, &status);
[867]1960 if(hdutype != ASCII_TBL && hdutype != BINARY_TBL)
1961 {
1962 cout << " hdunum= " << hdunum_ << " hdutype= " << hdutype << endl;
[1209]1963 throw IOExc("FitsFile::PutColToFits, this HDU is not an ASCII table nor a binary table");
[867]1964 }
[839]1965 int code;
1966 long repeat, width;
1967 fits_get_coltype(fptr_, nocol+1, &code, &repeat,&width, &status);
1968 if( code != TDOUBLE)
1969 {
[1209]1970 cout << " WARNING : types don't match (PutColToFits) : on fits file= " << code << " to be written= DOUBLE " << endl;
[839]1971 }
[1499]1972 // cout << " 10 elements de colonne " << endl;
1973 // for (int toto=0; toto < 10; toto++) cout << donnees[toto] << endl;
[839]1974 fits_write_col(fptr_,TDOUBLE,nocol+1,1,1,nentries, donnees ,&status);
[1752]1975 if( status ) printerror( status,"erreur ecriture col. double, dans fichier fits" );
[839]1976}
[1218]1977
1978
1979
1980 /*! \fn void SOPHYA::FitsOutFile::PutColToFits(int nocol, int nentries, float* donnees) const
1981
1982same as previous method with float data
1983*/
[1379]1984void FitsOutFile::PutColToFits(int nocol, int nentries, r_4* donnees) const
[839]1985{
1986 int status = 0;
1987 int hdutype;
1988 fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
[1209]1989 if( status ) printerror(status,"PutColToFits: le movabs a foire");
[839]1990 fits_get_hdu_type(fptr_, &hdutype, &status);
1991 if(hdutype != ASCII_TBL && hdutype != BINARY_TBL)
1992 {
1993 cout << " hdunum= " << hdunum_ << " hdutype= " << hdutype << endl;
[1209]1994 throw IOExc("FitsFile::PutColToFits, this HDU is not an ASCII table nor a binary table");
[839]1995 }
1996 if(hdutype == ASCII_TBL && nocol>0)
1997 {
[1209]1998 throw IOExc("FitsFile::PutColToFits, this HDU is an ASCII table, nocol>0 forbidden");
[839]1999 }
2000 int code;
2001 long repeat, width;
2002 fits_get_coltype(fptr_, nocol+1, &code, &repeat,&width, &status);
2003 if( code != TFLOAT)
2004 {
[1209]2005 cout << " WARNING : types don't match (PutColToFits) : on fits file= " << code << " (FITS code), to be written= FLOAT " << endl;
[839]2006 }
2007 fits_write_col(fptr_,TFLOAT,nocol+1,1,1,nentries, donnees ,&status);
[1752]2008 if( status ) printerror( status,"erreur ecriture col. floats, dans fichier fits" );
[839]2009}
[1218]2010
2011
2012/*! \fn void FitsOutFile::PutColToFits(int nocol, int nentries, int* donnees) const
2013
2014same as previous method with int data
2015*/
[1379]2016void FitsOutFile::PutColToFits(int nocol, int nentries, int_4* donnees) const
[839]2017{
2018 int status = 0;
2019 int hdutype;
2020 fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
[1209]2021 if( status ) printerror(status,"PutColToFits: le movabs a foire");
[839]2022 fits_get_hdu_type(fptr_, &hdutype, &status);
2023 if(hdutype != ASCII_TBL && hdutype != BINARY_TBL)
2024 {
2025 cout << " hdunum= " << hdunum_ << " hdutype= " << hdutype << endl;
[1209]2026 throw IOExc("FitsFile::PutColToFits, this HDU is not an ASCII table nor a binary table");
[839]2027 }
2028 if(hdutype == ASCII_TBL && nocol>0)
2029 {
[1209]2030 throw IOExc("FitsFile::PutColToFits, this HDU is an ASCII table, nocol>0 forbidden");
[839]2031 }
2032 int code;
2033 long repeat, width;
2034 fits_get_coltype(fptr_, nocol+1, &code, &repeat,&width, &status);
[1752]2035
2036
[2197]2037
2038 if (code == TINT || code == TLONG)
[839]2039 {
[2197]2040 // cfitsio n'a que des entiers de longueur inferieure a 32 bits.
2041 // ici, a l'ecriture TLONG impliquerait que le tableau de donnees
2042 // soit un tableau int_8. Donc c'est toujours TINT qu;il faut mettre
2043 // De plus, j'ai l'impression que TINT va devenir obsolete dans cfitsio
2044 // (GLM)
[1752]2045 fits_write_col(fptr_,TINT,nocol+1,1,1,nentries, donnees ,&status);
2046 }
2047 else
2048 {
2049 cout << " WARNING : types don't match (PutColToFits) : on fits file= " << code << " (FITS code), to be written= integers " << endl;
[839]2050 }
[1752]2051 if( status ) printerror( status,"erreur ecriture col. entiers, dans fichier fits" );
[839]2052}
[1218]2053
2054
2055/*! \fn void SOPHYA::FitsOutFile::PutColToFits(int nocol, int nentries, char** donnees) const
2056same as previous method with char* data
2057*/
[1209]2058void FitsOutFile::PutColToFits(int nocol, int nentries, char** donnees) const
[839]2059{
2060 int status = 0;
2061 int hdutype;
2062 fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
[1209]2063 if( status ) printerror(status,"PutColToFits: le movabs a foire");
[839]2064 fits_get_hdu_type(fptr_, &hdutype, &status);
2065 if(hdutype != ASCII_TBL && hdutype != BINARY_TBL)
2066 {
2067 cout << " hdunum= " << hdunum_ << " hdutype= " << hdutype << endl;
[1209]2068 throw IOExc("FitsFile::PutColToFits, this HDU is not an ASCII table nor a binary table");
[839]2069 }
2070 if(hdutype == ASCII_TBL && nocol>0)
2071 {
[1209]2072 throw IOExc("FitsFile::PutColToFits, this HDU is an ASCII table, nocol>0 forbidden");
[839]2073 }
2074 int code;
2075 long repeat, width;
2076 fits_get_coltype(fptr_, nocol+1, &code, &repeat,&width, &status);
2077 if( code != TSTRING)
2078 {
[1209]2079 cout << " WARNING : types don't match (PutColToFits) : on fits file= " << code << " (FITS code), to be written= char** " << endl;
[839]2080 }
2081 fits_write_col(fptr_,TSTRING,nocol+1,1,1,nentries, donnees ,&status);
[1752]2082 if( status ) printerror( status,"erreur ecriture col. chars, dans fichier fits" );
[839]2083}
2084
[1209]2085void FitsOutFile::PutBinTabLine(long NoLine, BnTblLine& ligne) const
[1193]2086{
[1209]2087 // on ne fait pas de verification de type, ni de dimension ici, pour
2088 // des raisons de performances
2089 int k;
[1193]2090 int status= 0;
[1978]2091 int anynul;
[1209]2092 int ncol=0;
[1193]2093 long nels=1;
[1209]2094 // int nbcols;
2095 // fits_get_num_cols(fptr_, &nbcols,&status);
2096 for (k=0; k<ligne.ddata_.size(); k++, ncol++)
[1193]2097 {
[1209]2098 fits_write_col(fptr_,TDOUBLE,ncol+1,NoLine+1,1,1, &ligne.ddata_[k] ,&status);
2099 if( status ) printerror( status, "PutBinTabLine : erreur ecriture double" );
[1193]2100 }
[1209]2101 for (k=0; k<ligne.fdata_.size(); k++, ncol++)
2102 {
2103 fits_write_col(fptr_,TFLOAT,ncol+1,NoLine+1,1,1, &ligne.fdata_[k] ,&status);
2104 if( status ) printerror( status, "PutBinTabLine : erreur ecriture float" );
2105 }
2106 for (k=0; k<ligne.idata_.size(); k++, ncol++)
2107 {
2108 fits_write_col(fptr_,TINT,ncol+1,NoLine+1,1,1, &ligne.idata_[k] ,&status);
2109 if( status ) printerror( status, "PutBinTabLine : erreur ecriture entier" );
2110 }
[1359]2111 for (k=0; k<ligne.ldata_.size(); k++, ncol++)
2112 {
2113 fits_write_col(fptr_,TLONG,ncol+1,NoLine+1,1,1, &ligne.ldata_[k] ,&status);
2114 if( status ) printerror( status, "PutBinTabLine : erreur ecriture entier long" );
2115 }
2116 for (k=0; k<ligne.bdata_.size(); k++, ncol++)
2117 {
2118 fits_write_col(fptr_,TBYTE,ncol+1,NoLine+1,1,1, &ligne.bdata_[k] ,&status);
2119 if( status ) printerror( status, "PutBinTabLine : erreur ecriture byte" );
2120 }
[1209]2121
2122 for (k=0; k<ligne.cdata_.size(); k++, ncol++)
2123 {
[1220]2124 fits_write_col(fptr_,TSTRING,ncol+1,NoLine+1,1,1, (void*)ligne.cdata_[k].c_str() ,&status);
[1209]2125 if( status ) printerror( status, "PutBinTabLine : erreur ecriture caracteres" );
2126 }
[1193]2127}
2128
2129
[1218]2130/* \fn void SOPHYA::FitsOutFile::DVListIntoPrimaryHeader(DVList& dvl) const
2131
2132Put keywords from a DVList into the primary header of the fits-file
2133*/
[1246]2134void FitsOutFile::DVListIntoPrimaryHeader(DVList& dvl)
[1143]2135{
2136 int status = 0;
2137 int hdutype;
[1246]2138 if (hdunum_ == 0)
2139 {
2140 if (dvlToPrimary_ == NULL) dvlToPrimary_ = new DVList(dvl);
2141 else dvlToPrimary_->Merge(dvl);
2142 }
2143 else
2144 {
2145 fits_movabs_hdu(fptr_,1,&hdutype,&status);
2146 addKeywordsOfDVList(dvl);
2147 fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
2148 }
[1143]2149}
[839]2150
[1143]2151
[1246]2152void FitsOutFile::writeSignatureOnFits(int hdunum) const
[839]2153{
2154 int status = 0;
[1246]2155 int hdutype;
[839]2156 char keyname[LEN_KEYWORD];
2157 char strval[FLEN_VALUE];
2158 char comment[FLEN_COMMENT];
[1246]2159 if (hdunum_ == 0)
2160 {
2161 cerr << " WARNING : can't write keywords on non existing primary header" << endl;
2162 return;
2163 }
2164 fits_movabs_hdu(fptr_,1,&hdutype,&status);
2165 //
[971]2166 strncpy(keyname, "CREATOR", LEN_KEYWORD);
[1418]2167 keyname[7] = '\0';
[971]2168 strcpy(strval, "SOPHYA");
2169 strcpy(comment," SOPHYA Package - FITSIOServer ");
2170 fits_write_key(fptr_, TSTRING, keyname, &strval, comment, &status);
2171 if( status ) printerror( status );
[1143]2172 fits_write_date(fptr_, &status);
[971]2173 fits_write_comment(fptr_,"..............................................", &status);
2174 fits_write_comment(fptr_, " SOPHYA package - FITSIOSever ", &status);
2175 fits_write_comment(fptr_, " (C) LAL/IN2P3-CNRS Orsay, FRANCE 2000", &status);
2176 fits_write_comment(fptr_, " (C) DAPNIA/CEA Saclay, FRANCE 2000", &status);
2177 fits_write_comment(fptr_,"..............................................", &status);
[1045]2178 if( status ) printerror( status, "erreur writeSignatureOnFits" );
[1246]2179 //
2180 fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
[839]2181}
2182
[903]2183
[1246]2184void FitsOutFile::addKeywordsOfDVList( DVList& dvl) const
[1143]2185{
2186 int status = 0;
2187 fits_write_comment(fptr_,"---------- keywords from SOPHYA ---------", &status);
2188 DVList::ValList::const_iterator it;
2189 for(it = dvl.Begin(); it != dvl.End(); it++)
2190 {
[1311]2191 MuTyV::MTVType keytype= (*it).second.elval.Type();
[1418]2192 char keyname[LEN_KEYWORD];
2193 strncpy(keyname,(*it).first.substr(0,64).c_str(),LEN_KEYWORD);
2194 int bout = ((*it).first.substr(0,64).length() < LEN_KEYWORD) ? (*it).first.substr(0,64).length() : LEN_KEYWORD-1;
2195 keyname[bout] = '\0';
2196 string key((*it).first.substr(0,64));
2197 // string key(keyname);
[1143]2198 char comment[FLEN_COMMENT];
2199 char strval[FLEN_VALUE]= "";
2200 char *comkey = "COMMENT";
[1353]2201 // fits_read_keyword(fptr_, keyname, strval, NULL, &status);
2202 // if (status != 0 || strncmp(keyname,comkey,LEN_KEYWORD-1) == 0 )
[1143]2203 {
[1183]2204 string coco = dvl.GetComment(key);
2205 coco.copy( comment, FLEN_COMMENT-1);
2206 int bout = (coco.length() < FLEN_COMMENT) ? coco.length() : FLEN_COMMENT-1;
2207 comment[bout]= '\0';
[1143]2208 status = 0;
2209 switch (keytype)
2210 {
[1311]2211 case MuTyV::MTVInteger :
[1143]2212 {
[1183]2213 int ival = (int)dvl.GetI(key);
2214 fits_write_key(fptr_,TINT,keyname,&ival, comment,&status);
[1143]2215 break;
2216 }
[1311]2217 case MuTyV::MTVFloat :
[1143]2218 {
[1183]2219 double dval= (double)dvl.GetD(key);
[1143]2220 fits_write_key(fptr_,TDOUBLE,keyname,&dval,comment,&status);
2221 break;
2222 }
[1311]2223 case MuTyV::MTVString :
[1143]2224 {
[1183]2225 char strvaleur[FLEN_VALUE]= "";
2226 string valChaine = dvl.GetS(key);
2227 valChaine.copy(strvaleur, FLEN_VALUE-1);
2228 int fin = (valChaine.length() < FLEN_VALUE) ? valChaine.length() : FLEN_VALUE-1;
2229 strvaleur[fin]= '\0';
2230
2231 fits_write_key(fptr_,TSTRING,keyname,&strvaleur,comment,&status);
[1143]2232 break;
2233 }
2234 }
2235 }
2236 if( status ) printerror( status,"fitsfile: probleme ecriture mot-cle du dvlist" );
2237 }
2238 fits_write_comment(fptr_,"--------------------------------------", &status);
2239}
[903]2240
2241
[1246]2242void FitsOutFile::addDVListOnPrimary()
2243 {
2244 int status = 0;
2245 int hdutype;
2246 if (hdunum_ == 0)
2247 {
2248 cerr << " WARNING : can't write keywords on non existing primary header" << endl;
2249 return;
2250 }
2251 if (dvlToPrimary_ != NULL)
2252 {
2253 fits_movabs_hdu(fptr_,1,&hdutype,&status);
2254 addKeywordsOfDVList(*dvlToPrimary_);
2255 delete dvlToPrimary_;
2256 dvlToPrimary_ = NULL;
2257 fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
2258 }
2259 }
[839]2260
[1353]2261
2262/*! \fn void FitsOutFile::appendInHeader(FitsInFile& infits, int hdunum)
2263
2264get a header from FitsInFile and append to the header beeing built
2265(shifting mandatory keywords)
2266*/
2267
2268void FitsOutFile::appendInputHeader(FitsInFile& infits, int hdunum)
2269{
[1771]2270
2271 infits.GetKeywordsFromHeader(hdunum, mots_cles_);
2272 /*
[1353]2273 int status = 0;
2274 int hdutype;
2275 fitsfile* fptr=infits.fitsfilePtr();
2276 fits_movabs_hdu(fptr,hdunum,&hdutype,&status);
2277 if( status ) fits_report_error(stderr,status);
2278
2279 // get number of keywords
2280 int nkeys,keypos;
2281 fits_get_hdrpos(fptr,&nkeys,&keypos,&status);
2282 if( status ) fits_report_error(stderr,status);
2283 // shift with the number of mandatory keywords
2284 int num= 0;
2285 // if primary header
2286 if (hdunum == 1)
2287 {
2288 // read NAXIS
2289 int naxis=0;
2290 fits_read_key(fptr,TINT,"NAXIS",&naxis,NULL,&status);
2291 // number of mandatory keywords
2292 num = naxis+3;
2293 }
2294 // extensions
2295 else
2296 {
2297 if (hdutype == IMAGE_HDU)
2298 {
2299 // read NAXIS
2300 int naxis=0;
2301 fits_read_key(fptr,TINT,"NAXIS",&naxis,NULL,&status);
2302 // number of mandatory keywords
2303 num = naxis+5;
2304 }
2305 else
2306 if(hdutype == ASCII_TBL || hdutype == BINARY_TBL)
2307 {
2308 // number of mandatory keywords
2309 num = 8;
2310 }
2311 }
2312 int j;
2313 char keyname[LEN_KEYWORD];
2314 char value[FLEN_VALUE];
2315 char comment[FLEN_COMMENT];
2316 for(j = num+1; j <= nkeys; j++)
2317 {
2318 char dtype;
2319 fits_read_keyn(fptr,j,keyname,value,comment,&status);
2320 if(status)
2321 {
2322 fits_report_error(stderr,status);
2323 status=0;
2324 }
2325 string kn(keyname);
2326 string cm(comment);
2327 string val(value);
2328 FitsKeyword kw(kn, val, cm);
2329 mots_cles_.push_back(kw);
2330 }
[1771]2331 */
[1353]2332}
2333void FitsOutFile::writeAppendedHeaderOnFits()
2334{
2335 for (list<FitsKeyword>::iterator it=mots_cles_.begin(); it !=mots_cles_.end(); it++)
2336 {
2337 (*it).writeOnFits(fptr_);
2338 }
2339 mots_cles_.clear();
2340}
2341
2342void FitsOutFile::insertKeywordOnHeader(string keyname, double value, string comment)
2343{
[1418]2344 char cvalue[16];
[1353]2345 sprintf(cvalue,"%e",value);
[1418]2346 FitsKeyword kw(keyname, string(cvalue), comment, 'F');
[1353]2347 mots_cles_.push_back(kw);
2348}
[1418]2349void FitsOutFile::insertKeywordOnHeader(string keyname, int value, string comment)
2350{
2351 char cvalue[16];
2352 sprintf(cvalue,"%d",value);
2353 FitsKeyword kw(keyname, string(cvalue), comment, 'I');
2354 mots_cles_.push_back(kw);
2355}
2356void FitsOutFile::insertKeywordOnHeader(string keyname, string value, string comment)
2357{
2358 FitsKeyword kw(keyname, value , comment, 'C');
2359 mots_cles_.push_back(kw);
2360}
[1353]2361
2362void FitsOutFile::insertCommentLineOnHeader(string comment)
2363{
2364 FitsKeyword kw(comment);
2365 mots_cles_.push_back(kw);
2366}
2367
2368void FitsOutFile::PrintHeaderToBeAppended()
2369{
2370 cout << " contenu du header en cours de fabrication " << endl;
2371 for (list<FitsKeyword>::iterator it=mots_cles_.begin(); it !=mots_cles_.end(); it++)
2372 {
2373 (*it).Print();
2374 }
2375}
2376
2377
2378FitsKeyword::FitsKeyword()
2379 {
2380 datatype_=' ';
2381 keyname_ = string("");
2382 dvalue_=0.;
2383 ivalue_=1;
2384 svalue_=string("");
2385 comment_=string("");
2386 }
2387
2388FitsKeyword::FitsKeyword(string comment)
2389 {
2390 datatype_=' ';
2391 keyname_=string("COMMENT");
2392 comment_=comment;
[1418]2393 }
[1353]2394
2395FitsKeyword::FitsKeyword(string keyname, string value, string comment) : keyname_(keyname), comment_(comment)
2396 {
2397 int status=0;
2398 char dtype;
2399 const char* val= value.c_str();
2400 char* valk = const_cast<char*>(val);
2401 fits_get_keytype(valk,&dtype,&status);
2402 if(status)
2403 {
2404 status=0;
[1354]2405 if (status == VALUE_UNDEFINED) cout << "WARNING (FitsKeyword) : undefined keyword value " << endl;
[1353]2406 datatype_=' ';
2407 }
2408 else datatype_=dtype;
2409
2410 switch( datatype_ )
2411 {
2412 case 'C':
2413 {
[1354]2414 strip(valk, 'B','\'');
2415 svalue_ = string(valk);
[1353]2416 break;
2417 }
2418 case 'I':
2419 {
2420 ivalue_ = atoi(val);
2421 break;
2422 }
2423 case 'L':
2424 {
[1354]2425 bool bb = value.c_str();
2426 ivalue_ = (int)bb;
[1353]2427 break;
2428 }
2429 case 'F':
2430 {
2431 dvalue_ = atof(val);
2432 break;
2433 }
2434 case 'X':
2435 {
2436 throw IOExc("FitsKeyword , complex keyword value not supported");
2437 }
2438 }
2439 }
2440
[1418]2441// constructeur pour les mots-cles maison (ne prvenant pas de la lecture d'un fichier fits)
2442FitsKeyword::FitsKeyword(string keyname, string value, string comment, char type) : keyname_(keyname), comment_(comment), datatype_(type)
2443 {
2444 char dtype;
2445 const char* val= value.c_str();
2446 char* valk = const_cast<char*>(val);
2447 switch( datatype_ )
2448 {
2449 case 'C':
2450 {
2451 strip(valk, 'B','\'');
2452 svalue_ = string(valk);
2453 break;
2454 }
2455 case 'I':
2456 {
2457 ivalue_ = atoi(val);
2458 break;
2459 }
2460 case 'L':
2461 {
2462 bool bb = value.c_str();
2463 ivalue_ = (int)bb;
2464 break;
2465 }
2466 case 'F':
2467 {
2468 dvalue_ = atof(val);
2469 break;
2470 }
2471 case 'X':
2472 {
2473 throw IOExc("FitsKeyword , complex keyword value not supported");
2474 }
2475 }
2476 }
2477
[1353]2478void FitsKeyword::writeOnFits(fitsfile* ptr)
2479 {
2480 int status=0;
[1418]2481 char keyname[LEN_KEYWORD];
2482 char comment[FLEN_COMMENT];
2483 keyname_.copy(keyname, LEN_KEYWORD);
2484 int bout = (keyname_.length() < LEN_KEYWORD) ? keyname_.length() : LEN_KEYWORD-1;
2485 keyname[bout] = '\0';
2486 comment_.copy( comment, FLEN_COMMENT);
2487 bout = (comment_.length() < FLEN_COMMENT) ? comment_.length() : FLEN_COMMENT-1;
2488 comment[bout]= '\0';
2489
[1353]2490 int nkeys,keypos;
2491 fits_get_hdrpos(ptr,&nkeys,&keypos,&status);
2492 switch( datatype_ )
2493 {
2494 case 'C':
2495 {
[1418]2496 char value[FLEN_VALUE]="";
2497 svalue_.copy(value, FLEN_VALUE-1);
2498 int fin = (svalue_.length() < FLEN_VALUE) ? svalue_.length() : FLEN_VALUE-1;
2499 value[fin]= '\0';
[1353]2500 fits_write_key(ptr,TSTRING,keyname,&value, comment,&status);
2501 fits_report_error(stderr,status);
2502 break;
2503 }
2504 case 'I':
2505 {
2506 fits_write_key(ptr,TINT,keyname,&ivalue_, comment,&status);
2507 fits_report_error(stderr,status);
2508 break;
2509 }
2510 case 'L':
2511 {
2512 fits_write_key(ptr,TLOGICAL,keyname,&ivalue_, comment,&status);
2513 fits_report_error(stderr,status);
2514 break;
2515 }
2516 case 'F':
2517 {
2518 fits_write_key(ptr,TDOUBLE,keyname,&dvalue_, comment,&status);
2519 fits_report_error(stderr,status);
2520 break;
2521 }
2522 case 'X':
2523 {
2524 cout << "FitsKeyword : complex keyword value not supported" << endl;;
[2197]2525 break;
[1353]2526 }
2527 default :
2528 {
2529 char *comkey = "COMMENT";
2530 if(strncmp(keyname,comkey,LEN_KEYWORD-1) == 0)
2531 {
2532 fits_write_comment(ptr,comment,&status);
2533 fits_report_error(stderr,status);
2534 }
2535 else
2536 {
2537 cout << " WARNING (FitsKeyword::writeOnFits) : unrecognized keyword : " << keyname_ << endl;
2538 }
2539 }
2540 }
2541 }
2542
2543void FitsKeyword::Print()
2544 {
2545 switch( datatype_ )
2546 {
2547 case 'C':
2548 {
2549 cout << " mot cle : " << keyname_ << " valeur : " << svalue_ << " commentaire : " << comment_ <<endl;
2550 break;
2551 }
2552 case 'I':
2553 {
2554 cout << " mot cle : " << keyname_ << " valeur : " << ivalue_ << " commentaire : " << comment_ <<endl;
2555 break;
2556 }
2557 case 'L':
2558 {
2559 cout << " mot cle : " << keyname_ << " valeur : " << ivalue_ << " commentaire : " << comment_ <<endl;
2560 break;
2561 }
2562 case 'F':
2563 {
2564 cout << " mot cle : " << keyname_ << " valeur : " << dvalue_ << " commentaire : " << comment_ <<endl;
2565 break;
2566 }
2567 case 'X':
2568 {
2569 cout << "FitsKeyword : complex keyword value not supported" << endl;;
2570 }
2571 default :
2572 {
2573 cout << " mot cle : " << keyname_ << " commentaire : " << comment_ <<endl;
2574 }
2575 }
2576 }
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