[839] | 1 | #include "fitsfile.h"
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| 2 | #include "pexceptions.h"
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| 3 | #include "strutil.h"
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| 4 |
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| 5 |
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| 6 | FitsFile::FitsFile()
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| 7 | {
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| 8 | fptr_= NULL;
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| 9 | hdutype_= 0;
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| 10 | hdunum_ = 0;
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| 11 |
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| 12 | nrows_ = 0;
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| 13 | }
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| 14 |
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| 15 |
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| 16 | FitsFile::~FitsFile()
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| 17 | {
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| 18 | int status = 0;
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| 19 | if( fptr_ != NULL) fits_close_file(fptr_,&status);
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| 20 | if( status ) printerror( status );
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| 21 | }
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| 22 | void FitsFile::ReadF(char flnm[],int hdunum)
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| 23 | {
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| 24 | int status = 0;
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| 25 | hdutype_= 0;
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| 26 | hdunum_ = 0;
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| 27 | fits_open_file(&fptr_,flnm,READONLY,&status);
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| 28 | if( status ) printerror( status );
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| 29 |
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| 30 | // move to the specified HDU number
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| 31 | int hdutype;
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| 32 | fits_movabs_hdu(fptr_,hdunum,&hdutype,&status);
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| 33 | if( status ) printerror( status );
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| 34 |
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| 35 | hdutype_= hdutype;
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| 36 | hdunum_ = hdunum;
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| 37 | if(hdutype_ == IMAGE_HDU)
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| 38 | {
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| 39 | read_image();
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| 40 | }
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| 41 | if(hdutype_ == ASCII_TBL || hdutype_ == BINARY_TBL)
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| 42 | {
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| 43 | GetBinTabParameters();
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| 44 | }
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| 45 | ReadFromFits(*this);
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| 46 |
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| 47 | }
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| 48 | void FitsFile::WriteF(char flnm[],int hdunum)
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| 49 | {
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| 50 | int status = 0;
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| 51 | hdutype_= 0;
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| 52 | hdunum_ = hdunum;
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| 53 | // create new FITS file
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| 54 | fits_create_file(&fptr_,flnm,&status);
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| 55 | if( status ) printerror(status,"file already exists");
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| 56 | WriteToFits(*this);
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| 57 | }
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| 58 | void FitsFile::GetSingleColumn(double* map, int nentries) const
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| 59 | {
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| 60 | int status = 0;
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| 61 | if(hdutype_ == IMAGE_HDU)
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| 62 | {
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| 63 |
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| 64 | if(bitpix_ != DOUBLE_IMG)
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| 65 | {
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| 66 | cout << " The data type on fits file is not double...";
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| 67 | cout << " Conversion to double achieved by cfitsio lib" << endl;
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| 68 | }
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| 69 |
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| 70 | // no checking for undefined pixels
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| 71 | int anull;
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| 72 | double dnull= 0.;
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| 73 |
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| 74 | long nels= nentries;
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| 75 | fits_read_img(fptr_,TDOUBLE,1,nels,&dnull,map,&anull,&status);
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| 76 | if( status ) printerror( status );
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| 77 | }
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| 78 | else
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| 79 | if(hdutype_ == ASCII_TBL || hdutype_ == BINARY_TBL)
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| 80 | {
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| 81 | GetBinTabFCol(map,nentries, 0);
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| 82 | }
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| 83 | else
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| 84 | {
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| 85 | cout << " hdutype= " << hdutype_ << endl;
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| 86 | throw IOExc("FitsFile::GetSingleColumn this HDU is unknown");
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| 87 | }
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| 88 | }
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| 89 |
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| 90 | void FitsFile::GetSingleColumn(float* map, int nentries) const
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| 91 | {
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| 92 | int status = 0;
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| 93 | if(hdutype_ == IMAGE_HDU)
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| 94 | {
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| 95 | if(bitpix_ != FLOAT_IMG)
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| 96 | {
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| 97 | cout << " The data type on fits file is not float ";
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| 98 | cout << " Conversion to float achieved by cfitsio lib" << endl;
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| 99 | }
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| 100 | // no checking for undefined pixels
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| 101 | int anull;
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| 102 | float fnull= 0.;
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| 103 |
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| 104 | long nels= nentries;
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| 105 | fits_read_img(fptr_,TFLOAT,1,nels,&fnull, map,&anull,&status);
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| 106 | if( status ) printerror( status );
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| 107 | }
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| 108 | else
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| 109 | if(hdutype_ == ASCII_TBL || hdutype_ == BINARY_TBL)
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| 110 | {
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| 111 | GetBinTabFCol(map,nentries, 0);
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| 112 | }
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| 113 | else
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| 114 | {
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| 115 | cout << " hdutype= " << hdutype_ << endl;
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| 116 | throw IOExc("FitsFile::GetSingleColumn this HDU is unknown");
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| 117 | }
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| 118 | }
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| 119 |
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| 120 | void FitsFile::GetSingleColumn( int* map, int nentries) const
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| 121 | {
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| 122 | int status = 0;
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| 123 | if(hdutype_ == IMAGE_HDU)
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| 124 | {
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| 125 | if(bitpix_ != LONG_IMG)
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| 126 | {
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| 127 | cout << " The data type on fits file is not int ";
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| 128 | cout << " Conversion to float achieved by cfitsio lib" << endl;
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| 129 | }
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| 130 | // no checking for undefined pixels
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| 131 | int anull;
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| 132 | float fnull= 0.;
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| 133 |
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| 134 | long nels= nentries;
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| 135 | fits_read_img(fptr_,TINT,1,nels,&fnull,map,&anull,&status);
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| 136 | if( status ) printerror( status );
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| 137 | }
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| 138 | else
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| 139 | if(hdutype_ == ASCII_TBL || hdutype_ == BINARY_TBL)
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| 140 | {
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| 141 | GetBinTabFCol(map,nentries, 0);
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| 142 | }
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| 143 | else
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| 144 | {
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| 145 | cout << " hdutype= " << hdutype_ << endl;
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| 146 | throw IOExc("FitsFile::GetSingleColumn this HDU is unknown");
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| 147 | }
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| 148 | }
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[861] | 149 | void FitsFile::makeHeaderImageOnFits(char type, int nbdim, int* naxisn) const
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[839] | 150 | {
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| 151 | int status = 0;
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[861] | 152 | long naxis = nbdim;
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| 153 | long* naxes = new long[nbdim];
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| 154 | for (int k=0; k< nbdim; k++) naxes[k] = (long)naxisn[k];
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[839] | 155 | if (type == 'D')
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| 156 | fits_create_img(fptr_,DOUBLE_IMG,naxis,naxes,&status);
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| 157 | else
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| 158 | if (type == 'E')
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| 159 | fits_create_img(fptr_,FLOAT_IMG,naxis,naxes,&status);
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| 160 | else
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| 161 | if (type == 'I')
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| 162 | fits_create_img(fptr_,LONG_IMG,naxis,naxes,&status);
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| 163 | else
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| 164 | {
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| 165 | cout << " type of data: " << type << endl;
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| 166 | throw PException("FitsFile:::makeHeaderImageOnFits:unprogrammed type of data ");
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| 167 | }
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[861] | 168 | delete [] naxes;
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[839] | 169 | if( status ) printerror( status );
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| 170 |
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| 171 | }
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| 172 | void FitsFile::putImageToFits(int nbData, double* map) const
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| 173 | {
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| 174 | int status = 0;
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| 175 | long npix= nbData;
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| 176 | fits_write_img(fptr_,TDOUBLE,1,npix,map,&status);
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| 177 | if( status ) printerror( status );
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| 178 | writeSignatureOnFits();
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| 179 | }
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| 180 |
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| 181 | void FitsFile::putImageToFits(int nbData, float* map) const
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| 182 | {
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| 183 | int status = 0;
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| 184 | long npix= nbData;
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| 185 | fits_write_img(fptr_,TFLOAT,1,npix, map,&status);
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| 186 | if( status ) printerror( status );
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| 187 | writeSignatureOnFits();
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| 188 |
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| 189 | }
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| 190 | void FitsFile::putImageToFits( int nbData, int* map) const
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| 191 | {
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| 192 | int status = 0;
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| 193 |
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| 194 | long npix= nbData;
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| 195 | fits_write_img(fptr_,TINT,1,npix,map,&status);
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| 196 | if( status ) printerror( status );
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| 197 | writeSignatureOnFits();
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| 198 | }
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| 199 |
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| 200 |
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| 201 | void FitsFile::read_image()
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| 202 | {
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| 203 | cout << " Reading a FITS image in HDU : " << hdunum_ << endl;
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| 204 | int status= 0;
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| 205 |
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| 206 | // bits per pixels
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| 207 | fits_read_key(fptr_,TINT,"BITPIX",&bitpix_,NULL,&status);
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| 208 | if( status ) printerror( status );
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| 209 |
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| 210 | // number of dimensions in the FITS array
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| 211 | int naxis= 0;
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| 212 | fits_read_key(fptr_,TINT,"NAXIS",&naxis,NULL,&status);
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| 213 | if( status ) printerror( status );
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| 214 | naxis_ = naxis;
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| 215 |
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| 216 | // read the NAXIS1 and NAXIS2 keyword to get image size
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[861] | 217 | long* naxes = new long[naxis_] ;
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[839] | 218 | int nfound;
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| 219 | fits_read_keys_lng(fptr_,"NAXIS",1,naxis_,naxes,&nfound,&status);
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| 220 | if( status ) printerror( status );
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[861] | 221 | if (nfound != naxis_ )
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| 222 | cout << " WARNING : " << nfound << " axes found, expexted naxis= " << naxis_ << endl;
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| 223 | int lastSize = naxes[naxis_-1];
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| 224 | while (lastSize <= 1)
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| 225 | {
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| 226 | naxis_--;
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| 227 | lastSize = naxes[naxis_-1];
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| 228 | }
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[839] | 229 |
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[861] | 230 | nbData_ = 1;
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| 231 | for (int k=0; k<naxis_; k++)
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| 232 | {
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| 233 | naxisn_.push_back( (int)naxes[k] );
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| 234 | if (naxisn_[k] > 0) nbData_ *= naxisn_[k];
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[839] | 235 |
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| 236 | }
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[861] | 237 | delete [] naxes;
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[839] | 238 | }
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| 239 |
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| 240 |
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| 241 | void FitsFile::GetBinTabFCol(double* valeurs,int nentries, int NoCol) const
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| 242 | {
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| 243 | int status= 0;
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| 244 | int DTYPE;
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| 245 | long repeat,width;
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| 246 | fits_get_coltype(fptr_, NoCol+1,&DTYPE,&repeat,&width,&status);
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| 247 | if( DTYPE != TDOUBLE)
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| 248 | {
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| 249 | throw IOExc("FitsFile::GetBinTabFCol, tentative de lecture non double");
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| 250 | }
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| 251 | long nels=nentries;
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| 252 | // no checking for undefined pixels
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| 253 | int anull;
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| 254 | float dnull= 0.;
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| 255 | fits_read_col(fptr_,TDOUBLE,NoCol+1,1,1,nels,&dnull,valeurs,
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| 256 | &anull,&status);
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| 257 | if( status ) printerror( status,"erreur lecture de colonne" );
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| 258 | }
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| 259 |
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| 260 | void FitsFile::GetBinTabFCol(float* valeurs,int nentries, int NoCol) const
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| 261 | {
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| 262 | int status= 0;
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| 263 | int DTYPE;
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| 264 | long repeat,width;
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| 265 | fits_get_coltype(fptr_, NoCol+1,&DTYPE,&repeat,&width,&status);
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| 266 | if( DTYPE != TFLOAT)
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| 267 | {
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| 268 | throw IOExc("FitsFile::GetBinTabFCol, tentative de lecture non float");
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| 269 | }
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| 270 | long nels=nentries;
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| 271 | // no checking for undefined pixels
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| 272 | int anull;
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| 273 | float fnull= 0.;
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| 274 | fits_read_col(fptr_,TFLOAT,NoCol+1,1,1,nels,&fnull,valeurs,
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| 275 | &anull,&status);
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| 276 | if( status ) printerror( status,"erreur lecture de colonne" );
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| 277 | }
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| 278 | void FitsFile::GetBinTabFCol(int* valeurs,int nentries, int NoCol) const
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| 279 | {
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| 280 | int status= 0;
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| 281 | int DTYPE;
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| 282 | long repeat,width;
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| 283 | fits_get_coltype(fptr_, NoCol+1,&DTYPE,&repeat,&width,&status);
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| 284 | if( DTYPE != TLONG && DTYPE != TINT && DTYPE != TSHORT )
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| 285 | {
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| 286 | throw IOExc("FitsFile::GetBinTabFCol, tentative de lecture non entier");
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| 287 | }
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| 288 | long nels=nentries;
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| 289 | // no checking for undefined pixels
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| 290 | int anull;
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| 291 | int inull= 0;
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| 292 | fits_read_col(fptr_,TINT,NoCol+1,1,1,nels,&inull,valeurs,
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| 293 | &anull,&status);
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| 294 | if( status ) printerror( status,"erreur lecture de colonne" );
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| 295 | }
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| 296 | void FitsFile::GetBinTabFCol(char** valeurs, int nentries, int NoCol) const
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| 297 | {
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| 298 | int status= 0;
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| 299 | int DTYPE;
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| 300 | long repeat,width;
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| 301 | fits_get_coltype(fptr_, NoCol+1,&DTYPE,&repeat,&width,&status);
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| 302 | if( DTYPE != TSTRING )
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| 303 | {
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| 304 | throw IOExc("FitsFile::GetBinTabFCol, tentative de lecture non float");
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| 305 | }
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| 306 | long nels=nentries;
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| 307 | // no checking for undefined pixels
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| 308 | int anull;
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| 309 | char* cnull= " ";
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| 310 | long frow=1;
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| 311 | long felem=1;
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| 312 | fits_read_col(fptr_,TSTRING,NoCol+1,frow,felem,nels,cnull,valeurs,
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| 313 | &anull,&status);
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| 314 | if( status ) printerror( status,"erreur lecture de colonne" );
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| 315 | }
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| 316 | int FitsFile::NbColsFromFits() const
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| 317 | {
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| 318 | int status= 0;
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| 319 | if(hdutype_ == BINARY_TBL) return nbcols_;
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| 320 | else
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| 321 | if(hdutype_ == ASCII_TBL || hdutype_ == IMAGE_HDU) return 1;
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| 322 | else
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| 323 | {
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| 324 | cout << " hdutype= " << hdutype_ << endl;
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| 325 | throw PException("FitsFile::NbColsFromFits, this HDU is unknown");
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| 326 | }
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| 327 | }
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| 328 |
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| 329 | char FitsFile::ColTypeFromFits(int nocol) const
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| 330 | {
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| 331 | int status= 0;
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| 332 | if(hdutype_ != ASCII_TBL && hdutype_ != BINARY_TBL)
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| 333 | {
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| 334 | throw IOExc("FitsFile::TypeFromFits, this HDU is not an ASCII table nor a binary table");
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| 335 | }
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| 336 | return types_[nocol];
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| 337 | }
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| 338 | int FitsFile::NentriesFromFits(int nocol) const
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| 339 | {
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| 340 | int status= 0;
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| 341 | if(hdutype_ == BINARY_TBL ) return nrows_*repeat_[nocol];
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| 342 | else
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| 343 | if(hdutype_ == ASCII_TBL) return nrows_;
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| 344 | else
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| 345 | if(hdutype_ == IMAGE_HDU) return nbData_;
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| 346 | else
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| 347 | {
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| 348 | cout << "hdutype= " << hdutype_ << endl;
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| 349 | throw PException("FitsFile::NentriesFromFits, this HDU is unknown");
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| 350 | }
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| 351 | }
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| 352 |
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| 353 | string FitsFile::ColNameFromFits(int nocol) const
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| 354 | {
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| 355 | int status= 0;
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| 356 | if(hdutype_ != ASCII_TBL && hdutype_ != BINARY_TBL)
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| 357 | {
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| 358 | throw IOExc("FitsFile::TypeFromFits, this HDU is not an ASCII table nor a binary table");
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| 359 | }
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| 360 | return noms_[nocol];
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| 361 | }
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| 362 | int FitsFile::ColStringLengthFromFits(int nocol) const
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| 363 | {
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| 364 | int status= 0;
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| 365 | if(hdutype_ != ASCII_TBL && hdutype_ != BINARY_TBL)
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| 366 | {
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| 367 | throw IOExc("FitsFile::TypeFromFits, this HDU is not an ASCII table nor a binary table");
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| 368 | }
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| 369 | int index=-1;
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| 370 | for (int k=0; k<=nocol; k++)
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| 371 | {
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| 372 | if (types_[k] == 'S') index++;
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| 373 | }
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| 374 | return taille_des_chaines_[index];
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| 375 | }
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| 376 |
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| 377 | void FitsFile::GetBinTabParameters()
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| 378 | {
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| 379 | int status= 0;
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| 380 | if(hdutype_ != ASCII_TBL && hdutype_ != BINARY_TBL)
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| 381 | {
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| 382 | throw IOExc("FitsFile:: this HDU is not an ASCII table nor a binary table");
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| 383 | }
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| 384 | if(hdutype_ == ASCII_TBL)
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| 385 | cout << " Reading a FITS ascii table in HDU : " << hdunum_ << endl;
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| 386 | if(hdutype_ == BINARY_TBL)
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| 387 | cout << " Reading a FITS binary table in HDU : " << hdunum_ << endl;
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| 388 |
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| 389 | // get the number of columns
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| 390 | int nbcols = 0;
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| 391 | fits_get_num_cols(fptr_, &nbcols,&status);
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| 392 | if( status ) printerror( status );
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| 393 | nbcols_=nbcols;
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| 394 |
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| 395 | // get the number of rows
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| 396 | long naxis2= 0;
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| 397 | fits_get_num_rows(fptr_,&naxis2,&status);
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| 398 | if( status ) printerror( status );
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| 399 | nrows_= (int)naxis2;
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| 400 |
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| 401 | // get the datatype, names and the repeat count
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| 402 | noms_.clear();
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| 403 | noms_.reserve(nbcols);
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| 404 | types_.clear();
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| 405 | types_.reserve(nbcols);
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| 406 | repeat_.clear();
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| 407 | repeat_.reserve(nbcols);
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| 408 | taille_des_chaines_.clear();
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| 409 | char **ttype = new char*[nbcols];
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| 410 | for (int ii=0; ii < nbcols; ii++) ttype[ii]=new char[FLEN_VALUE];
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| 411 | int nfound;
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| 412 | fits_read_keys_str(fptr_, "TTYPE",1,nbcols,ttype,&nfound, &status);
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| 413 | if( status ) printerror( status,"erreur lecture des noms de colonne");
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| 414 | // int nentries = nrows_;
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| 415 | int rept=0;
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| 416 | for(int ii = 0; ii < nbcols; ii++)
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| 417 | {
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| 418 | int DTYPE;
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| 419 | long width;
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| 420 | long repeat = 0;
|
---|
| 421 | fits_get_coltype(fptr_,ii+1,&DTYPE,&repeat,&width,&status);
|
---|
| 422 | if( status ) printerror( status,"erreur lecture type de colonne");
|
---|
| 423 | rept = repeat;
|
---|
| 424 | noms_.push_back(string(ttype[ii]));
|
---|
| 425 | // cout << " getparam: nentries= " << nentries << " rept= " << rept << endl;
|
---|
| 426 | switch (DTYPE)
|
---|
| 427 | {
|
---|
| 428 | case TDOUBLE :
|
---|
| 429 | types_.push_back('D');
|
---|
| 430 | break;
|
---|
| 431 | case TFLOAT :
|
---|
| 432 | types_.push_back('E');
|
---|
| 433 | break;
|
---|
| 434 | case TLONG :
|
---|
| 435 | types_.push_back('I');
|
---|
| 436 | break;
|
---|
| 437 | case TINT :
|
---|
| 438 | types_.push_back('I');
|
---|
| 439 | break;
|
---|
| 440 | case TSHORT :
|
---|
| 441 | types_.push_back('I');
|
---|
| 442 | break;
|
---|
| 443 | case TSTRING :
|
---|
| 444 | types_.push_back('S');
|
---|
| 445 | taille_des_chaines_.push_back(width);
|
---|
| 446 | rept/=width;
|
---|
| 447 | break;
|
---|
| 448 | default :
|
---|
| 449 | cout << " field " << ii+1 << " DTYPE= " << DTYPE << endl;
|
---|
| 450 | throw IOExc("FitsFile:: unknown type of field");
|
---|
| 451 | }
|
---|
| 452 | // nentries = max(nentries, nrows_*rept);
|
---|
| 453 | repeat_.push_back(rept);
|
---|
| 454 | }
|
---|
| 455 | // get number of keywords
|
---|
| 456 | int nkeys,keypos;
|
---|
| 457 | fits_get_hdrpos(fptr_,&nkeys,&keypos,&status);
|
---|
| 458 | if( status ) printerror( status );
|
---|
| 459 |
|
---|
| 460 | // put keywords in a DVList object
|
---|
| 461 | char keyname[LEN_KEYWORD]= "";
|
---|
| 462 | char strval[FLEN_VALUE]= "";
|
---|
| 463 | char dtype;
|
---|
| 464 | char card[FLEN_CARD];
|
---|
| 465 | char *comkey = "COMMENT";
|
---|
| 466 |
|
---|
| 467 | // shift with the number of mandatory keywords
|
---|
| 468 | int num= 8;
|
---|
| 469 |
|
---|
| 470 | for(int j = num+1; j <= nkeys; j++)
|
---|
| 471 | {
|
---|
| 472 | fits_read_keyn(fptr_,j,card,strval,NULL,&status);
|
---|
| 473 | if(status) printerror(status);
|
---|
| 474 |
|
---|
| 475 | strncpy(keyname,card,LEN_KEYWORD-1);
|
---|
| 476 |
|
---|
| 477 | if(strncmp(keyname,comkey,LEN_KEYWORD-1) != 0 && strlen(keyname) != 0
|
---|
| 478 | && strlen(strval) != 0)
|
---|
| 479 | {
|
---|
| 480 | fits_get_keytype(strval,&dtype,&status);
|
---|
| 481 | if(status) printerror(status);
|
---|
| 482 |
|
---|
| 483 | strip(keyname, 'B',' ');
|
---|
| 484 | strip(strval, 'B',' ');
|
---|
| 485 | strip(strval, 'B','\'');
|
---|
| 486 |
|
---|
| 487 | switch( dtype )
|
---|
| 488 | {
|
---|
| 489 | case 'C':
|
---|
| 490 | dvl_[keyname]= strval;
|
---|
| 491 | break;
|
---|
| 492 | case 'I':
|
---|
| 493 | int ival;
|
---|
| 494 | fits_read_key(fptr_,TINT,keyname,&ival,NULL,&status);
|
---|
| 495 | dvl_[keyname]= (int_4) ival; // Portage mac DY
|
---|
| 496 | break;
|
---|
| 497 | case 'L':
|
---|
| 498 | int ilog;
|
---|
| 499 | if(strncmp(strval,"T",1) == 0) ilog= 1;
|
---|
| 500 | else ilog= 0;
|
---|
| 501 | dvl_[keyname]= (int_4) ilog;
|
---|
| 502 | break;
|
---|
| 503 | case 'F':
|
---|
| 504 | double dval;
|
---|
| 505 | fits_read_key(fptr_,TDOUBLE,keyname,&dval,NULL,&status);
|
---|
| 506 | dvl_[keyname]= dval;
|
---|
| 507 | break;
|
---|
| 508 | }
|
---|
| 509 |
|
---|
| 510 | }
|
---|
| 511 | }
|
---|
[867] | 512 | // dvl_.Print();
|
---|
[839] | 513 | }
|
---|
| 514 | void FitsFile::makeHeaderBntblOnFits( char* fieldType, char** Noms, int nentries, int tfields, DVList &dvl, char* extname, vector<int> taille_des_chaines) const
|
---|
| 515 | {
|
---|
| 516 | int status = 0;
|
---|
| 517 | long nrows;
|
---|
| 518 | if (strlen(fieldType) != tfields)
|
---|
| 519 | {
|
---|
| 520 | cout << " nombre de champs :" << tfields << "nombre de types: " << strlen(fieldType) << endl;
|
---|
| 521 | throw ParmError("FitsFile:: fields and types don't match");
|
---|
| 522 |
|
---|
| 523 | }
|
---|
| 524 | char ** ttype= new char*[tfields];
|
---|
| 525 | char ** tform= new char*[tfields];
|
---|
| 526 | char largeur[FLEN_VALUE];
|
---|
| 527 | int noColString=0;
|
---|
| 528 |
|
---|
| 529 |
|
---|
| 530 | for (int k=0; k<tfields;k++)
|
---|
| 531 | {
|
---|
| 532 | char format[FLEN_VALUE];
|
---|
| 533 |
|
---|
| 534 | if(nentries < 1024)
|
---|
| 535 | {
|
---|
| 536 | nrows= nentries;
|
---|
| 537 | if (fieldType[k] == 'A')
|
---|
| 538 | {
|
---|
| 539 | sprintf(largeur,"%d",taille_des_chaines[noColString++]);
|
---|
| 540 | strcpy(format,largeur);
|
---|
| 541 | }
|
---|
| 542 | else strcpy(format,"1");
|
---|
| 543 | }
|
---|
| 544 | else
|
---|
| 545 | {
|
---|
| 546 | nrows = nentries/1024;
|
---|
| 547 | if(nentries%1024 != 0) nrows++;
|
---|
| 548 | if (fieldType[k] == 'A')
|
---|
| 549 | {
|
---|
| 550 | char largaux[FLEN_VALUE];
|
---|
| 551 | sprintf(largeur,"%d",taille_des_chaines[noColString]);
|
---|
| 552 | sprintf(largaux,"%d",1024*taille_des_chaines[noColString]);
|
---|
| 553 | noColString++;
|
---|
| 554 | strcpy(format, largaux);
|
---|
| 555 | }
|
---|
| 556 | else strcpy(format,"1024");
|
---|
| 557 | }
|
---|
| 558 | strncat(format,&fieldType[k],1);
|
---|
| 559 | if (fieldType[k] == 'A')
|
---|
| 560 | {
|
---|
| 561 | strcat(format,largeur);
|
---|
| 562 | }
|
---|
| 563 | ttype[k]= new char[FLEN_VALUE];
|
---|
| 564 | strcpy(ttype[k],Noms[k]);
|
---|
| 565 | tform[k]= new char[FLEN_VALUE];
|
---|
| 566 | strcpy(tform[k],format);
|
---|
| 567 | }
|
---|
| 568 | const char* TypeOfContent= dvl.GetS("TypeOfContent").c_str();
|
---|
| 569 | // value of the EXTNAME keyword
|
---|
| 570 | char extn[FLEN_VALUE];
|
---|
| 571 | strncpy(extn,extname,FLEN_VALUE);
|
---|
| 572 |
|
---|
| 573 | // create a new empty binary table onto the FITS file
|
---|
| 574 | // physical units if they exist, are defined in the DVList object
|
---|
| 575 | // so the NULL pointer is given for the tunit parameters.
|
---|
| 576 | nrows=0;
|
---|
| 577 | fits_create_tbl(fptr_,BINARY_TBL,nrows,tfields,ttype,tform,
|
---|
| 578 | NULL,extn,&status);
|
---|
| 579 | if( status ) printerror( status );
|
---|
| 580 |
|
---|
| 581 | for(int ii = 0; ii < tfields; ii++)
|
---|
| 582 | {
|
---|
| 583 | delete [] ttype[ii];
|
---|
| 584 | delete [] tform[ii];
|
---|
| 585 | }
|
---|
| 586 | delete [] ttype;
|
---|
| 587 | delete [] tform;
|
---|
| 588 | //
|
---|
| 589 | // write supplementary keywords
|
---|
| 590 | //
|
---|
| 591 | // get names and values from the join DVList object
|
---|
[867] | 592 | // dvl.Print();
|
---|
[839] | 593 | DVList::ValList::const_iterator it;
|
---|
| 594 | for(it = dvl.Begin(); it != dvl.End(); it++)
|
---|
| 595 | {
|
---|
| 596 | char keytype= (*it).second.elval.typ;
|
---|
| 597 | char keyname[10];
|
---|
| 598 | strncpy(keyname,(*it).first.substr(0,64).c_str(),10);
|
---|
| 599 | char comment[FLEN_COMMENT];
|
---|
| 600 | switch (keytype)
|
---|
| 601 | {
|
---|
| 602 | case 'I' :
|
---|
| 603 | {
|
---|
| 604 | int ival=(*it).second.elval.mtv.iv;
|
---|
| 605 | strcpy(comment,"I entier");
|
---|
| 606 | fits_write_key(fptr_,TINT,keyname,&ival,comment,&status);
|
---|
| 607 | break;
|
---|
| 608 | }
|
---|
| 609 | case 'D' :
|
---|
| 610 | {
|
---|
| 611 | double dval=(*it).second.elval.mtv.dv;
|
---|
| 612 | strcpy(comment,"D double");
|
---|
| 613 | fits_write_key(fptr_,TDOUBLE,keyname,&dval,comment,&status);
|
---|
| 614 | break;
|
---|
| 615 | }
|
---|
| 616 | case 'S' :
|
---|
| 617 | {
|
---|
| 618 | char strval[128];
|
---|
| 619 | strncpy(strval,(*it).second.elval.mtv.strv,127);
|
---|
| 620 | strcpy(comment,"S character string");
|
---|
| 621 | fits_write_key(fptr_,TSTRING,keyname,&strval,comment,&status);
|
---|
| 622 | break;
|
---|
| 623 | }
|
---|
| 624 | }
|
---|
| 625 | if( status ) printerror( status,"fitsfile: probleme ecriture mot-cle du dvlist" );
|
---|
| 626 | }
|
---|
| 627 |
|
---|
| 628 | }
|
---|
| 629 |
|
---|
| 630 | void FitsFile::putColToFits(int nocol, int nentries, double* donnees) const
|
---|
| 631 | {
|
---|
| 632 | int status = 0;
|
---|
| 633 | int hdutype, hdunum;
|
---|
| 634 | fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
|
---|
| 635 | if( status ) printerror(status,"putColToFits: le movabs a foire");
|
---|
| 636 | fits_get_hdu_type(fptr_, &hdutype, &status);
|
---|
[867] | 637 | if(hdutype != ASCII_TBL && hdutype != BINARY_TBL)
|
---|
| 638 | {
|
---|
| 639 | cout << " hdunum= " << hdunum_ << " hdutype= " << hdutype << endl;
|
---|
| 640 | throw IOExc("FitsFile::putColToFits, this HDU is not an ASCII table nor a binary table");
|
---|
| 641 | }
|
---|
[839] | 642 | // if(hdutype == ASCII_TBL && nocol>0)
|
---|
| 643 | // {
|
---|
| 644 | // throw IOExc("FitsFile::putColToFits, this HDU is an ASCII table, nocol>0 forbidden");
|
---|
| 645 | // }
|
---|
| 646 | int code;
|
---|
| 647 | long repeat, width;
|
---|
| 648 | fits_get_coltype(fptr_, nocol+1, &code, &repeat,&width, &status);
|
---|
| 649 | if( code != TDOUBLE)
|
---|
| 650 | {
|
---|
| 651 | cout << " WARNING : types don't match (putColToFits) : on fits file= " << code << " to be written= DOUBLE " << endl;
|
---|
| 652 | }
|
---|
| 653 | fits_write_col(fptr_,TDOUBLE,nocol+1,1,1,nentries, donnees ,&status);
|
---|
| 654 | if( status ) printerror( status,"erreur ecriture du fichier fits" );
|
---|
| 655 | }
|
---|
| 656 | void FitsFile::putColToFits(int nocol, int nentries, float* donnees) const
|
---|
| 657 | {
|
---|
| 658 | int status = 0;
|
---|
| 659 | int hdutype;
|
---|
| 660 | fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
|
---|
| 661 | if( status ) printerror(status,"putColToFits: le movabs a foire");
|
---|
| 662 | fits_get_hdu_type(fptr_, &hdutype, &status);
|
---|
| 663 | if(hdutype != ASCII_TBL && hdutype != BINARY_TBL)
|
---|
| 664 | {
|
---|
| 665 | cout << " hdunum= " << hdunum_ << " hdutype= " << hdutype << endl;
|
---|
| 666 | throw IOExc("FitsFile::putColToFits, this HDU is not an ASCII table nor a binary table");
|
---|
| 667 | }
|
---|
| 668 | if(hdutype == ASCII_TBL && nocol>0)
|
---|
| 669 | {
|
---|
| 670 | throw IOExc("FitsFile::putColToFits, this HDU is an ASCII table, nocol>0 forbidden");
|
---|
| 671 | }
|
---|
| 672 | int code;
|
---|
| 673 | long repeat, width;
|
---|
| 674 | fits_get_coltype(fptr_, nocol+1, &code, &repeat,&width, &status);
|
---|
| 675 | if( code != TFLOAT)
|
---|
| 676 | {
|
---|
| 677 | cout << " WARNING : types don't match (putColToFits) : on fits file= " << code << " (FITS code), to be written= FLOAT " << endl;
|
---|
| 678 | }
|
---|
| 679 | fits_write_col(fptr_,TFLOAT,nocol+1,1,1,nentries, donnees ,&status);
|
---|
| 680 | if( status ) printerror( status,"erreur ecriture du fichier fits" );
|
---|
| 681 | }
|
---|
| 682 | void FitsFile::putColToFits(int nocol, int nentries, int* donnees) const
|
---|
| 683 | {
|
---|
| 684 | int status = 0;
|
---|
| 685 | int hdutype;
|
---|
| 686 | fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
|
---|
| 687 | if( status ) printerror(status,"putColToFits: le movabs a foire");
|
---|
| 688 | fits_get_hdu_type(fptr_, &hdutype, &status);
|
---|
| 689 | if(hdutype != ASCII_TBL && hdutype != BINARY_TBL)
|
---|
| 690 | {
|
---|
| 691 | cout << " hdunum= " << hdunum_ << " hdutype= " << hdutype << endl;
|
---|
| 692 | throw IOExc("FitsFile::putColToFits, this HDU is not an ASCII table nor a binary table");
|
---|
| 693 | }
|
---|
| 694 | if(hdutype == ASCII_TBL && nocol>0)
|
---|
| 695 | {
|
---|
| 696 | throw IOExc("FitsFile::putColToFits, this HDU is an ASCII table, nocol>0 forbidden");
|
---|
| 697 | }
|
---|
| 698 | int code;
|
---|
| 699 | long repeat, width;
|
---|
| 700 | fits_get_coltype(fptr_, nocol+1, &code, &repeat,&width, &status);
|
---|
| 701 | if( code != TLONG && code != TINT && code != TSHORT )
|
---|
| 702 | {
|
---|
| 703 | cout << " WARNING : types don't match (putColToFits) : on fits file= " << code << " (FITS code), to be written= FLOAT " << endl;
|
---|
| 704 | }
|
---|
| 705 | fits_write_col(fptr_,TINT,nocol+1,1,1,nentries, donnees ,&status);
|
---|
| 706 | if( status ) printerror( status,"erreur ecriture du fichier fits" );
|
---|
| 707 | }
|
---|
| 708 | void FitsFile::putColToFits(int nocol, int nentries, char** donnees) const
|
---|
| 709 | {
|
---|
| 710 | int status = 0;
|
---|
| 711 | int hdutype;
|
---|
| 712 | fits_movabs_hdu(fptr_,hdunum_,&hdutype,&status);
|
---|
| 713 | if( status ) printerror(status,"putColToFits: le movabs a foire");
|
---|
| 714 | fits_get_hdu_type(fptr_, &hdutype, &status);
|
---|
| 715 | if(hdutype != ASCII_TBL && hdutype != BINARY_TBL)
|
---|
| 716 | {
|
---|
| 717 | cout << " hdunum= " << hdunum_ << " hdutype= " << hdutype << endl;
|
---|
| 718 | throw IOExc("FitsFile::putColToFits, this HDU is not an ASCII table nor a binary table");
|
---|
| 719 | }
|
---|
| 720 | if(hdutype == ASCII_TBL && nocol>0)
|
---|
| 721 | {
|
---|
| 722 | throw IOExc("FitsFile::putColToFits, this HDU is an ASCII table, nocol>0 forbidden");
|
---|
| 723 | }
|
---|
| 724 | int code;
|
---|
| 725 | long repeat, width;
|
---|
| 726 | fits_get_coltype(fptr_, nocol+1, &code, &repeat,&width, &status);
|
---|
| 727 | if( code != TSTRING)
|
---|
| 728 | {
|
---|
| 729 | cout << " WARNING : types don't match (putColToFits) : on fits file= " << code << " (FITS code), to be written= char** " << endl;
|
---|
| 730 | }
|
---|
| 731 | fits_write_col(fptr_,TSTRING,nocol+1,1,1,nentries, donnees ,&status);
|
---|
| 732 | if( status ) printerror( status,"erreur ecriture du fichier fits" );
|
---|
| 733 | }
|
---|
| 734 |
|
---|
| 735 |
|
---|
| 736 |
|
---|
| 737 |
|
---|
| 738 | void FitsFile::readheader()
|
---|
| 739 | //*************************************/
|
---|
| 740 | //* Print out all the header keywords */
|
---|
| 741 | //*************************************/
|
---|
| 742 | {
|
---|
| 743 | // standard string lengths defined in fitsioc.h
|
---|
| 744 | char card[FLEN_CARD];
|
---|
| 745 |
|
---|
| 746 | int status = 0;
|
---|
| 747 |
|
---|
| 748 | // get the number of keywords
|
---|
| 749 | int nkeys, keypos;
|
---|
| 750 | if( fits_get_hdrpos(fptr_,&nkeys,&keypos,&status) )
|
---|
| 751 | printerror( status );
|
---|
| 752 |
|
---|
| 753 | cout << " Header listing for HDU : " << hdunum_ << endl;
|
---|
| 754 | for(int jj = 1; jj <= nkeys; jj++)
|
---|
| 755 | {
|
---|
| 756 | if( fits_read_record(fptr_,jj,card,&status) )
|
---|
| 757 | printerror( status );
|
---|
| 758 |
|
---|
| 759 | // print the keyword card
|
---|
| 760 | cout << card << endl;
|
---|
| 761 | }
|
---|
| 762 | cout << "END" << endl;
|
---|
| 763 | }
|
---|
| 764 |
|
---|
| 765 |
|
---|
| 766 | void FitsFile::writeSignatureOnFits() const
|
---|
| 767 | {
|
---|
| 768 | int status = 0;
|
---|
| 769 | char keyname[LEN_KEYWORD];
|
---|
| 770 | char strval[FLEN_VALUE];
|
---|
| 771 | char comment[FLEN_COMMENT];
|
---|
| 772 |
|
---|
| 773 | strcpy(keyname,"CREATOR");
|
---|
| 774 | strcpy(strval,"SOPHYA");
|
---|
| 775 | strcpy(comment,"SOPHYA Package - FitsFile");
|
---|
| 776 | fits_write_key(fptr_,TSTRING,keyname,&strval,comment,&status);
|
---|
| 777 | }
|
---|
| 778 |
|
---|
| 779 | void FitsFile::printerror(int &status) const
|
---|
| 780 | //*****************************************************/
|
---|
| 781 | //* Print out cfitsio error messages and exit program */
|
---|
| 782 | //*****************************************************/
|
---|
| 783 | {
|
---|
| 784 | if( status )
|
---|
| 785 | {
|
---|
| 786 | fits_report_error(stderr,status);
|
---|
| 787 | throw IOExc("FitsFile:: error FITSIO status");
|
---|
| 788 | }
|
---|
| 789 | return;
|
---|
| 790 | }
|
---|
| 791 |
|
---|
| 792 | void FitsFile::printerror(int& status, char* texte) const
|
---|
| 793 | //*****************************************************/
|
---|
| 794 | //* Print out cfitsio error messages and exit program */
|
---|
| 795 | //*****************************************************/
|
---|
| 796 | {
|
---|
| 797 | // print out cfitsio error messages and exit program
|
---|
| 798 | // print error report
|
---|
| 799 | fits_report_error(stderr, status);
|
---|
| 800 | cout << " erreur:: " << texte << endl;
|
---|
| 801 | throw IOExc("FitsFile:: error FITSIO status");
|
---|
| 802 | }
|
---|