1 | #include "sopnamsp.h"
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2 | #include "pexceptions.h"
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3 | #include "fitsntuple.h"
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4 | ///////////////////////////////////////////////////////////
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5 | // Les objets delegues pour la gestion de persistance sur fichiers fits
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6 | // pout NTuple
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7 | ///////////////////////////////////////////////////////////
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8 |
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9 |
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10 | #define LONNOM 8
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11 | #define LONNOM1 (LONNOM+1)
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12 |
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13 |
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14 | /*!
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15 | \class SOPHYA::FITS_NTuple
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16 | \ingroup FitsIOServer
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17 | FITS format I/O handler for SOPHYA::NTuple objects.
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18 | */
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19 |
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20 | FITS_NTuple::FITS_NTuple()
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21 | {
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22 | dobj_ = new NTuple;
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23 | InitNull();
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24 | ownobj_ = true;
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25 | }
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26 |
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27 | FITS_NTuple::FITS_NTuple(char inputfile[],int hdunum)
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28 | {
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29 | dobj_ = new NTuple;
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30 | InitNull();
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31 | ownobj_ = true;
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32 |
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33 | Read(inputfile,hdunum);
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34 | }
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35 |
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36 |
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37 | FITS_NTuple::FITS_NTuple(const NTuple & obj)
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38 | {
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39 | dobj_ = new NTuple(obj);
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40 | InitNull();
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41 | ownobj_ = true;
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42 | }
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43 | FITS_NTuple::FITS_NTuple(NTuple* obj)
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44 | {
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45 | dobj_ = obj;
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46 | InitNull();
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47 | ownobj_ = false;
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48 | }
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49 |
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50 |
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51 | FITS_NTuple::~FITS_NTuple()
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52 | {
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53 | if (ownobj_ && dobj_ != NULL) delete dobj_;
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54 | // if (column_ != NULL) delete [] column_;
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55 | }
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56 |
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57 | int FITS_NTuple::CheckReadability(FitsInOutFile& is)
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58 | {
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59 | if (is.CurrentHDUType() == IMAGE_HDU ) return 0;
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60 | string key = "SOPCLSNM";
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61 | string clsnm = is.KeyValue(key);
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62 | if (clsnm == "SOPHYA::NTuple") return 2;
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63 | else return 1;
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64 | }
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65 |
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66 | //void FITS_NTuple::Read(char inputfile[],int hdunum)
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67 | //{
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68 | // ReadF(inputfile,hdunum);
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69 | //}
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70 | void FITS_NTuple::ReadLines(char inputfile[],int firstLine, int numberOfLines,int hdunum)
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71 | {
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72 | fistLineToBeRead_ = firstLine;
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73 | numberOfLinesToBeRead_ = numberOfLines;
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74 | Read(inputfile,hdunum);
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75 | }
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76 |
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77 |
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78 |
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79 | //void FITS_NTuple::Write(char outputfile[], bool OldFile)
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80 | //{
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81 | // WriteF(outputfile, OldFile);
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82 | //}
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83 |
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84 | void FITS_NTuple::ReadFromFits(FitsInFile& is)
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85 | {
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86 | if (!is.IsFitsTable())
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87 | {
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88 | throw PException("ReadFromFits: the fits file seems not to be a bintable nor ASCII table");
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89 | }
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90 | int nbcols, nbentries;
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91 | nbcols = is.NbColsFromFits();
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92 | nbentries = 0;
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93 | int k;
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94 | for (k=0; k<nbcols; k++) nbentries=max( nbentries, is.NentriesFromFits(k) );
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95 |
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96 | char ** ColName = new char*[nbcols];
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97 |
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98 | for (k=0; k<nbcols;k++)
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99 | {
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100 | ColName[k] = new char[LONNOM1];
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101 | strncpy(ColName[k], is.ColNameFromFits(k).c_str(),LONNOM);
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102 | ColName[k][LONNOM] = '\0';
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103 | }
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104 | for (k=0; k<nbcols;k++)
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105 | {
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106 | FitsFile::FitsDataType ss= is.ColTypeFromFits(k);
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107 | string type;
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108 | if (ss != FitsFile::FitsDataType_float)
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109 | {
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110 | if (ss == FitsFile::FitsDataType_double) type= string("double");
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111 | else
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112 | if (ss == FitsFile::FitsDataType_int) type= string("integer");
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113 | else
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114 | if (ss == FitsFile::FitsDataType_char) type = string("char*");
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115 | else
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116 | type = string("unknown");
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117 | cout << " WARNING: the column " << k << " on fits file is not float but : " << type << endl;
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118 | }
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119 | }
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120 | if(dobj_ == NULL)
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121 | {
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122 | dobj_= new NTuple(nbcols,ColName);
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123 | ownobj_ = true;
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124 | }
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125 | else
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126 | {
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127 | dobj_->Clean();
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128 | (*dobj_) = NTuple(nbcols,ColName);
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129 | }
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130 | for (k=0; k<nbcols;k++)
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131 | {
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132 | delete [] ColName[k];
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133 | }
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134 | delete [] ColName;
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135 |
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136 | float* ligne = new float[nbcols];
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137 |
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138 | int firstln, lastln;
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139 | if (numberOfLinesToBeRead_ > 0)
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140 | {
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141 | firstln = fistLineToBeRead_;
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142 | lastln = firstln + numberOfLinesToBeRead_;
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143 | }
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144 | else
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145 | {
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146 | firstln = 0;
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147 | lastln = nbentries;
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148 | }
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149 | int numLigne;
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150 | for (numLigne=firstln; numLigne < lastln; numLigne++)
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151 | {
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152 | is.GetBinTabLine(numLigne, ligne);
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153 | dobj_->Fill((r_4*)ligne);
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154 | }
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155 | delete [] ligne;
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156 |
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157 | dobj_->Info()=is.DVListFromFits();
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158 | }
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159 |
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160 | void FITS_NTuple::WriteToFits(FitsOutFile& os)
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161 | {
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162 | if(dobj_ == NULL)
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163 | {
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164 | cout << " WriteToFits:: dobj_= null " << endl;
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165 | return;
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166 | }
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167 |
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168 | // table will have 'ncols' columns
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169 | int ncols = dobj_->NVar();
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170 |
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171 | // table will have 'nrows' rows
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172 | int nentries = dobj_->NEntry();
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173 |
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174 | // get names and values from the join DVList object
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175 | DVList dvl= dobj_->Info();
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176 | dvl["Content"]= "NTuple";
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177 | dvl.SetComment("Content", "name of SOPHYA object");
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178 | dvl["SOPCLSNM"]= "SOPHYA::NTuple";
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179 | dvl.SetComment("SOPCLSNM", "SOPHYA class name");
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180 | // extension name
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181 | // string extname("NTuple_Binary_tbl");
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182 | string extname = os.NextExtensionName();
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183 |
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184 | vector<string> Noms(ncols);
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185 | int k;
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186 | for (k=0; k< ncols; k++)
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187 | {
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188 | Noms[k]= dobj_->NomIndex(k);
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189 | }
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190 |
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191 | string type(ncols, 'E');
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192 | vector<int> dummy;
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193 |
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194 | os.makeHeaderBntblOnFits(type,Noms, nentries, ncols, &dvl, extname, dummy);
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195 | float* column = new float[nentries];
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196 | for (k=0; k<ncols;k++)
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197 | {
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198 | int j;
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199 | for(j = 0; j < nentries; j++) column[j]= dobj_->GetVal(j,k);
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200 | os.PutColToFits(k, nentries, column);
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201 | }
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202 | delete [] column;
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203 |
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204 | }
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205 |
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