[787] | 1 | // This may look like C code, but it is really -*- C++ -*-
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| 2 | // Base array class - Memory organisation management
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| 3 | // R. Ansari, C.Magneville 03/2000
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| 4 |
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| 5 | #ifndef BaseArray_SEEN
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| 6 | #define BaseArray_SEEN
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| 7 |
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| 8 | #include "machdefs.h"
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| 9 | #include <math.h>
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| 10 | #include <iostream.h>
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| 11 | #include "anydataobj.h"
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| 12 | #include "dvlist.h"
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| 13 |
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| 14 |
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| 15 | // Maximum number of dimensions for array
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| 16 | #define BASEARRAY_MAXNDIMS 5
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| 17 |
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| 18 | namespace SOPHYA {
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| 19 |
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| 20 | // ------------ classe template Array -----------
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| 21 | class BaseArray : public AnyDataObj {
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| 22 | public:
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[804] | 23 | // To define Array / Matrix memory mapping
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[813] | 24 | enum MemoryMapping { AutoMemoryMapping = -1, SameMemoryMapping = 0,
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[804] | 25 | CMemoryMapping = 1, FortranMemoryMapping = 2 };
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[813] | 26 | // Vector type
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| 27 | enum VectorType {AutoVectorType = -1, SameVectorType = 0,
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| 28 | ColumnVector = 1, RowVector = 2};
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[804] | 29 |
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[813] | 30 | // Size threshold for parallel routine call
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| 31 | static void SetOpenMPSizeThreshold(uint_8 thr=200000);
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| 32 | static inline uint_8 GetOpenMPSizeThreshold() { return openmp_size_threshold; }
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| 33 | // Max Nb of printed elements and print level
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| 34 | static void SetMaxPrint(uint_4 nprt=50, uint_4 lev=0);
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| 35 | static inline uint_4 GetMaxPrint() { return max_nprt_; }
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| 36 | static inline uint_4 GetPrintLevel() { return prt_lev_; }
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| 37 |
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| 38 | // Memory organisation (for matrices) and vector type
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[804] | 39 | static short SetDefaultMemoryMapping(short mm=CMemoryMapping);
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| 40 | static inline short GetDefaultMemoryMapping() { return default_memory_mapping; }
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[813] | 41 | static short SetDefaultVectorType(short vt=ColumnVector);
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| 42 | static inline short GetDefaultVectorType() { return default_vector_type; }
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[804] | 43 |
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[787] | 44 | // Creation / destruction
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| 45 | BaseArray();
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| 46 | virtual ~BaseArray();
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| 47 |
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| 48 | // Returns true if ndim and sizes are equal
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| 49 | virtual bool CompareSizes(const BaseArray& a);
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| 50 |
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| 51 | // Compacts size=1 array dimensions
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| 52 | virtual void CompactAllDim(); // suppresses all size==1 dimensions
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| 53 | virtual void CompactTrailingDim(); // suppresses size==1 dimensions after the last size>1 dimension
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| 54 |
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| 55 | // Array dimensions
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| 56 | inline uint_4 NbDimensions() const { return( ndim_ ); }
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| 57 |
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| 58 | inline uint_8 Size() const { return(totsize_); }
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| 59 | inline uint_4 SizeX() const { return(size_[0]); }
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| 60 | inline uint_4 SizeY() const { return(size_[1]); }
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| 61 | inline uint_4 SizeZ() const { return(size_[2]); }
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| 62 | inline uint_4 Size(int ka) const { return(size_[CheckDI(ka,1)]); }
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| 63 |
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| 64 | uint_4 MaxSizeKA() const ;
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| 65 |
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[813] | 66 | // memory organisation
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[804] | 67 | inline short GetMemoryMapping() const
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[813] | 68 | { return ( (marowi_ == 1) ? CMemoryMapping : FortranMemoryMapping) ; }
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[804] | 69 |
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[813] | 70 | inline uint_4 RowsKA() const {return marowi_; } // Dimension des index de lignes
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| 71 | inline uint_4 ColsKA() const {return macoli_; } // Dimension des index de colonnes
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| 72 | inline uint_4 VectKA() const {return veceli_; } // Dimension des index des elts d'un vecteur
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| 73 | void SetMemoryMapping(short mm=AutoMemoryMapping);
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[804] | 74 |
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[813] | 75 | // Vector type Line or Column vector
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| 76 | inline short GetVectorType() const
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| 77 | { return((marowi_ == veceli_) ? ColumnVector : RowVector); }
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| 78 | void SetVectorType(short vt=AutoVectorType);
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| 79 |
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| 80 | // memory organisation - packing information
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[787] | 81 | inline bool IsPacked() const { return(moystep_ == 1); }
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| 82 | inline bool IsPackedX() const { return(step_[0] == 1); }
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| 83 | inline bool IsPackedY() const { return(step_[1] == 1); }
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| 84 | inline bool IsPackedZ() const { return(step_[2] == 1); }
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| 85 | inline bool IsPacked(int ka) const { return(step_[CheckDI(ka,2)] == 1); }
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| 86 |
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| 87 | inline uint_4 MinStep() const { return(minstep_); }
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| 88 | inline uint_4 AvgStep() const { return(moystep_); }
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| 89 | inline uint_4 StepX() const { return(step_[0]); }
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| 90 | inline uint_4 StepY() const { return(step_[1]); }
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| 91 | inline uint_4 StepZ() const { return(step_[2]); }
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| 92 | inline uint_4 Step(int ka) const { return(step_[CheckDI(ka,3)]); }
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| 93 |
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| 94 | uint_4 MinStepKA() const ;
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| 95 |
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[813] | 96 | // Offset of element ip
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[787] | 97 | uint_8 Offset(uint_8 ip=0) const ;
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[813] | 98 | // Offset of the i'th vector along axe ka
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| 99 | uint_8 Offset(uint_4 ka, uint_8 i) const ;
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[787] | 100 | inline uint_8 Offset(uint_4 ix, uint_4 iy, uint_4 iz, uint_4 it=0, uint_4 iu=0) const;
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| 101 |
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| 102 | // a abstract element acces methode
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| 103 | virtual double ValueAtPosition(uint_8 ip) const = 0;
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| 104 |
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| 105 | // Impression, I/O, ...
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[804] | 106 | void Show(ostream& os, bool si=false) const;
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| 107 | inline void Show() const { Show(cout); }
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[813] | 108 | virtual string InfoString() const;
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[787] | 109 |
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| 110 | // Objet DVList info
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| 111 | DVList& Info();
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| 112 |
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| 113 | protected:
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| 114 | // Verifie la compatibilite de l'index de dimension
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| 115 | inline int CheckDI(int ka, int msg) const ;
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| 116 | // Verifie la compatibilite des bornes d'index
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| 117 | inline void CheckBound(int ix, uint_4 iy, uint_4 iz, uint_4 it, uint_4 iu, int msg) const ;
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| 118 | // Changing Sizes/NDim ... return true if OK
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| 119 | bool UpdateSizes(uint_4 ndim, const uint_4 * siz, uint_4 step, uint_8 offset, string & exmsg);
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| 120 | bool UpdateSizes(uint_4 ndim, const uint_4 * siz, const uint_4 * step, uint_8 offset, string & exmsg);
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| 121 | bool UpdateSizes(const BaseArray& a, string & exmsg);
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[804] | 122 | static uint_8 ComputeTotalSize(uint_4 ndim, const uint_4 * siz, uint_4 step, uint_8 offset) ;
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| 123 | // Organisation memoire
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| 124 | static short SelectMemoryMapping(short mm);
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[813] | 125 | static short SelectVectorType(short vt);
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| 126 | void UpdateMemoryMapping(short mm);
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[804] | 127 | void UpdateMemoryMapping(BaseArray const & a, short mm);
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[787] | 128 |
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[804] | 129 | // Pour Extraction de sous-tableau
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| 130 | virtual void UpdateSubArraySizes(BaseArray & ra, uint_4 ndim, uint_4 * siz, uint_4 * pos, uint_4 * step) const;
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| 131 |
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[787] | 132 | uint_4 ndim_; // nb of dimensions
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| 133 | uint_4 size_[BASEARRAY_MAXNDIMS]; // array size in each dimension
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| 134 | uint_8 totsize_; // Total number of elements
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| 135 | uint_4 step_[BASEARRAY_MAXNDIMS]; // two consecutive elements distance in a given dimension
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| 136 | uint_4 minstep_; // minimal step (in any axes)
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[813] | 137 | uint_4 moystep_; // mean step if == 0 --> non regular steps
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[787] | 138 | uint_8 offset_; // global offset -> position of elem[0] in DataBlock
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| 139 | uint_4 marowi_, macoli_; // For matrices, Row index and column index in dimensions
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[804] | 140 | uint_4 veceli_; // For vectors, dimension index = marowi_/macoli_ (Row/Col vectors)
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[813] | 141 | bool ck_memo_vt_; // if true, check MemoryOrg./VectorType for CompareSize
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[787] | 142 | DVList* mInfo; // Infos (variables) attachees au tableau
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| 143 |
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| 144 | static char * ck_op_msg_[6]; // Operation messages for CheckDI() CheckBound()
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| 145 | static uint_4 max_nprt_; // Nb maxi d'elements imprimes
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[813] | 146 | static uint_4 prt_lev_; // Niveau de print 0 ou 1
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[804] | 147 | static short default_memory_mapping; // Default memory mapping
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[813] | 148 | static short default_vector_type; // Default vector type Row/Column
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| 149 | static uint_8 openmp_size_threshold; // Size limit for parallel routine calls
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[787] | 150 | };
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| 151 |
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| 152 | // --------------------------------------------------
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| 153 | // Methodes inline de verification
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| 154 | // --------------------------------------------------
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| 155 | inline int BaseArray::CheckDI(int ka, int msg) const
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| 156 | {
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| 157 | if ( (ka < 0) || (ka >= ndim_) ) {
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| 158 | string txt = "BaseArray::CheckDimensionIndex/Error "; txt += ck_op_msg_[msg];
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[813] | 159 | throw(RangeCheckError(txt));
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[787] | 160 | }
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| 161 | return(ka);
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| 162 | }
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| 163 |
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| 164 | inline void BaseArray::CheckBound(int ix, uint_4 iy, uint_4 iz, uint_4 it, uint_4 iu, int msg) const
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| 165 | {
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| 166 | if ( (ix >= size_[0]) || (iy >= size_[1]) || (iz > size_[2]) ||
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| 167 | (it >= size_[3]) || (iu >= size_[4]) ) {
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| 168 | string txt = "BaseArray::CheckArrayBound/Error "; txt += ck_op_msg_[msg];
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[813] | 169 | throw(RangeCheckError(txt));
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[787] | 170 | }
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| 171 | return;
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| 172 | }
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| 173 |
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| 174 |
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[813] | 175 |
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[787] | 176 | // --------------------------------------------------
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| 177 | // Position d'un element
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| 178 | // --------------------------------------------------
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| 179 | inline uint_8 BaseArray::Offset(uint_4 ix, uint_4 iy, uint_4 iz, uint_4 it, uint_4 iu) const
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| 180 | {
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| 181 | #ifdef SO_BOUNDCHECKING
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| 182 | CheckBound(ix, iy, iz, it, iu, 4);
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| 183 | #endif
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| 184 | return ( offset_+ ix*step_[0] + iy*step_[1] + iz*step_[2] +
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| 185 | it*step_[3] + iu*step_[4] );
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| 186 | }
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| 187 |
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| 188 |
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| 189 | } // Fin du namespace
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| 190 |
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| 191 | #endif
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