source: Sophya/trunk/SophyaLib/TArray/basarr.h@ 920

Last change on this file since 920 was 920, checked in by ansari, 25 years ago

define module HiStats in Doc cmv 13/4/00

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1// This may look like C code, but it is really -*- C++ -*-
2// Base array class - Memory organisation management
3// R. Ansari, C.Magneville 03/2000
4
5#ifndef BaseArray_SEEN
6#define BaseArray_SEEN
7
8#include "machdefs.h"
9#include <math.h>
10#include <iostream.h>
11#include "anydataobj.h"
12#include "dvlist.h"
13
14
15//! Maximum number of dimensions for an array
16/*! \anchor BASEARRAY_MAXNDIMS */
17#define BASEARRAY_MAXNDIMS 5
18
19namespace SOPHYA {
20
21// ------------ classe template Array -----------
22//! Base class for template arrays
23/*!
24 \class SOPHYA::BaseArray
25 \ingroup TArray
26 No data are connected to this class.
27
28 Define base methods, enum and defaults for TArray , TMatrix and TVector.
29*/
30class BaseArray : public AnyDataObj {
31public:
32 //! To define Array or Matrix memory mapping
33 enum MemoryMapping {
34 AutoMemoryMapping = -1, //!< define Auto Memory Mapping
35 SameMemoryMapping = 0, //!< define Same Memory Mapping
36 CMemoryMapping = 1, //!< define C Memory Mapping
37 FortranMemoryMapping = 2 //!< define Fortran Memory Mapping
38 };
39 //! To define Vector type
40 enum VectorType {
41 AutoVectorType = -1, //!< define Auto Vector Type
42 SameVectorType = 0, //!< define Same Vector Type
43 ColumnVector = 1, //!< define Column Vector Type
44 RowVector = 2 //!< define Row Vector Type
45 };
46
47 // threshold for parallel routine call
48 static void SetOpenMPSizeThreshold(uint_8 thr=200000);
49 //! Get Size threshold for parallel routine call
50 static inline uint_8 GetOpenMPSizeThreshold() { return openmp_size_threshold; }
51
52 static void SetMaxPrint(uint_4 nprt=50, uint_4 lev=0);
53 //! Get maximum number of printed elements
54 static inline uint_4 GetMaxPrint() { return max_nprt_; }
55 //! Maximum number of printed elements arint level
56 static inline uint_4 GetPrintLevel() { return prt_lev_; }
57
58 static short SetDefaultMemoryMapping(short mm=CMemoryMapping);
59 //! Get Default Memory Mapping
60 static inline short GetDefaultMemoryMapping() { return default_memory_mapping; }
61 static short SetDefaultVectorType(short vt=ColumnVector);
62 //! Get Default Vector Type
63 static inline short GetDefaultVectorType() { return default_vector_type; }
64
65 // Creator / destructor
66 BaseArray();
67 virtual ~BaseArray();
68
69 // Returns true if ndim and sizes are equal
70 virtual bool CompareSizes(const BaseArray& a);
71
72 // Compacts \b size=1 array dimensions
73 virtual void CompactAllDim(); // suppresses all size==1 dimensions
74 virtual void CompactTrailingDim(); // suppresses size==1 dimensions after the last size>1 dimension
75
76 // Array dimensions
77 //! Return number of dimensions
78 inline uint_4 NbDimensions() const { return( ndim_ ); }
79
80 //! Return total size of the array
81 inline uint_8 Size() const { return(totsize_); }
82 //! Return size along the first dimension
83 inline uint_4 SizeX() const { return(size_[0]); }
84 //! Return size along the second dimension
85 inline uint_4 SizeY() const { return(size_[1]); }
86 //! Return size along the third dimension
87 inline uint_4 SizeZ() const { return(size_[2]); }
88 //! Return size along the \b ka th dimension
89 inline uint_4 Size(int ka) const { return(size_[CheckDI(ka,1)]); }
90
91 uint_4 MaxSizeKA() const ;
92
93 //! Get memory organization
94 inline short GetMemoryMapping() const
95 { return ( (marowi_ == 1) ? CMemoryMapping : FortranMemoryMapping) ; }
96 //! line index dimension
97 inline uint_4 RowsKA() const {return marowi_; }
98 //! line column dimension
99 inline uint_4 ColsKA() const {return macoli_; }
100 //! Index dimension of the elements of a vector
101 inline uint_4 VectKA() const {return veceli_; }
102 void SetMemoryMapping(short mm=AutoMemoryMapping);
103
104 //! Get Vector type ( \b Line or \b Column vector )
105 inline short GetVectorType() const
106 { return((marowi_ == veceli_) ? ColumnVector : RowVector); }
107 void SetVectorType(short vt=AutoVectorType);
108
109 // memory organisation - packing information
110 //! return true if array is packed in memory
111 inline bool IsPacked() const { return(moystep_ == 1); }
112 //! return true if array is packed along the first dimension
113 inline bool IsPackedX() const { return(step_[0] == 1); }
114 //! return true if array is packed along the second dimension
115 inline bool IsPackedY() const { return(step_[1] == 1); }
116 //! return true if array is packed along the third dimension
117 inline bool IsPackedZ() const { return(step_[2] == 1); }
118 //! return true if array is packed along the \b ka th dimension
119 inline bool IsPacked(int ka) const { return(step_[CheckDI(ka,2)] == 1); }
120
121 //! return the minimum step value along all the dimensions
122 inline uint_4 MinStep() const { return(minstep_); }
123 //! return the average step value along all the dimensions
124 inline uint_4 AvgStep() const { return(moystep_); }
125 //! return the step along the first dimension
126 inline uint_4 StepX() const { return(step_[0]); }
127 //! return the step along the second dimension
128 inline uint_4 StepY() const { return(step_[1]); }
129 //! return the step along the third dimension
130 inline uint_4 StepZ() const { return(step_[2]); }
131 //! return the step along the \b ka th dimension
132 inline uint_4 Step(int ka) const { return(step_[CheckDI(ka,3)]); }
133
134 uint_4 MinStepKA() const ;
135
136 // Offset of element ip
137 uint_8 Offset(uint_8 ip=0) const ;
138 // Offset of the i'th vector along axe ka
139 uint_8 Offset(uint_4 ka, uint_8 i) const ;
140 inline uint_8 Offset(uint_4 ix, uint_4 iy, uint_4 iz, uint_4 it=0, uint_4 iu=0) const;
141
142 // an abstract element acces methode
143 virtual double ValueAtPosition(uint_8 ip) const = 0;
144
145 // Impression, I/O, ...
146 void Show(ostream& os, bool si=false) const;
147 //! Show information on \b cout
148 inline void Show() const { Show(cout); }
149 virtual string InfoString() const;
150
151 // DVList info Object
152 DVList& Info();
153
154protected:
155 inline int CheckDI(int ka, int msg) const ;
156 inline void CheckBound(int ix, uint_4 iy, uint_4 iz, uint_4 it, uint_4 iu, int msg) const ;
157 // Changing Sizes/NDim ... return true if OK
158 bool UpdateSizes(uint_4 ndim, const uint_4 * siz, uint_4 step, uint_8 offset, string & exmsg);
159 bool UpdateSizes(uint_4 ndim, const uint_4 * siz, const uint_4 * step, uint_8 offset, string & exmsg);
160 bool UpdateSizes(const BaseArray& a, string & exmsg);
161 static uint_8 ComputeTotalSize(uint_4 ndim, const uint_4 * siz, uint_4 step, uint_8 offset) ;
162 // Organisation memoire
163 static short SelectMemoryMapping(short mm);
164 static short SelectVectorType(short vt);
165 void UpdateMemoryMapping(short mm);
166 void UpdateMemoryMapping(BaseArray const & a, short mm);
167
168 // Pour Extraction de sous-tableau
169 virtual void UpdateSubArraySizes(BaseArray & ra, uint_4 ndim, uint_4 * siz, uint_4 * pos, uint_4 * step) const;
170
171 uint_4 ndim_; //!< number of dimensions of array
172 uint_4 size_[BASEARRAY_MAXNDIMS]; //!< array of the size in each dimension
173 uint_8 totsize_; //!< Total number of elements
174 //! two consecutive elements distance in a given dimension
175 uint_4 step_[BASEARRAY_MAXNDIMS];
176 uint_4 minstep_; //!< minimal step (in any axes)
177 uint_4 moystep_; //!< mean step, if == 0 --\> non regular steps
178 uint_8 offset_; //!< global offset -\> position of elem[0] in DataBlock
179 uint_4 marowi_; //!< For matrices, Row index in dimensions
180 uint_4 macoli_; //!< For matrices, Column index in dimensions
181 uint_4 veceli_; //!< For vectors, dimension index = marowi_/macoli_ (Row/Col vectors)
182 bool ck_memo_vt_; //!< if true, check MemoryOrg./VectorType for CompareSize
183 DVList* mInfo; //!< Infos (variables) attached to the array
184
185 static char * ck_op_msg_[6]; //!< Operation messages for CheckDI() CheckBound()
186 static uint_4 max_nprt_; //!< maximum number of printed elements
187 static uint_4 prt_lev_; //!< Print level
188 static short default_memory_mapping; //!< Default memory mapping
189 static short default_vector_type; //!< Default vector type Row/Column
190 static uint_8 openmp_size_threshold; //!< Size limit for parallel routine calls
191};
192
193// --------------------------------------------------
194// Methodes inline de verification
195// --------------------------------------------------
196//! to verify the compatibility of the dimension index
197inline int BaseArray::CheckDI(int ka, int msg) const
198{
199 if ( (ka < 0) || (ka >= ndim_) ) {
200 string txt = "BaseArray::CheckDimensionIndex/Error "; txt += ck_op_msg_[msg];
201 throw(RangeCheckError(txt));
202 }
203 return(ka);
204}
205
206//! to verify the compatibility of the indexes in all dimensions
207inline void BaseArray::CheckBound(int ix, uint_4 iy, uint_4 iz, uint_4 it, uint_4 iu, int msg) const
208{
209 if ( (ix >= size_[0]) || (iy >= size_[1]) || (iz > size_[2]) ||
210 (it >= size_[3]) || (iu >= size_[4]) ) {
211 string txt = "BaseArray::CheckArrayBound/Error "; txt += ck_op_msg_[msg];
212 throw(RangeCheckError(txt));
213 }
214 return;
215}
216
217
218
219// --------------------------------------------------
220// Position d'un element
221// --------------------------------------------------
222//! Offset of element (ix,iy,iz,it,iu)
223inline uint_8 BaseArray::Offset(uint_4 ix, uint_4 iy, uint_4 iz, uint_4 it, uint_4 iu) const
224{
225#ifdef SO_BOUNDCHECKING
226 CheckBound(ix, iy, iz, it, iu, 4);
227#endif
228 return ( offset_+ ix*step_[0] + iy*step_[1] + iz*step_[2] +
229 it*step_[3] + iu*step_[4] );
230}
231
232
233} // Fin du namespace
234
235#endif
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