1 | // This may look like C code, but it is really -*- C++ -*-
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2 | // Base array class - Memory organisation management
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3 | // R. Ansari, C.Magneville 03/2000
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4 |
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5 | #ifndef BaseArray_SEEN
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6 | #define BaseArray_SEEN
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7 |
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8 | #include "machdefs.h"
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9 | #include <math.h>
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10 | #include <iostream.h>
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11 | #include "anydataobj.h"
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12 | #include "mutyv.h"
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13 | #include "dvlist.h"
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14 |
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15 |
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16 | //! Maximum number of dimensions for an array
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17 | /*! \anchor BASEARRAY_MAXNDIMS */
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18 | #define BASEARRAY_MAXNDIMS 5
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19 |
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20 | namespace SOPHYA {
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21 |
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22 | // ------------ classe template Array -----------
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23 | //! Base class for template arrays
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24 | class BaseArray : public AnyDataObj {
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25 | public:
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26 | //! To define Array or Matrix memory mapping
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27 | enum MemoryMapping {
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28 | AutoMemoryMapping = -1, //!< define Auto Memory Mapping
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29 | SameMemoryMapping = 0, //!< define Same Memory Mapping
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30 | CMemoryMapping = 1, //!< define C Memory Mapping
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31 | FortranMemoryMapping = 2 //!< define Fortran Memory Mapping
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32 | };
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33 | //! To define Vector type
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34 | enum VectorType {
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35 | AutoVectorType = -1, //!< define Auto Vector Type
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36 | SameVectorType = 0, //!< define Same Vector Type
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37 | ColumnVector = 1, //!< define Column Vector Type
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38 | RowVector = 2 //!< define Row Vector Type
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39 | };
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40 |
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41 | // threshold for parallel routine call
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42 | static void SetOpenMPSizeThreshold(sa_size_t thr=200000);
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43 | //! Get Size threshold for parallel routine call
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44 | static inline sa_size_t GetOpenMPSizeThreshold() { return openmp_size_threshold; }
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45 |
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46 | static void SetMaxPrint(sa_size_t nprt=50, int_4 lev=0);
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47 | //! Get maximum number of printed elements
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48 | static inline sa_size_t GetMaxPrint() { return max_nprt_; }
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49 | //! Get print level
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50 | static inline int_4 GetPrintLevel() { return prt_lev_; }
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51 |
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52 | static short SetDefaultMemoryMapping(short mm=CMemoryMapping);
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53 | //! Get Default Memory Mapping
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54 | static inline short GetDefaultMemoryMapping() { return default_memory_mapping; }
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55 | static short SetDefaultVectorType(short vt=ColumnVector);
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56 | //! Get Default Vector Type
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57 | static inline short GetDefaultVectorType() { return default_vector_type; }
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58 |
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59 | // Creator / destructor
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60 | BaseArray();
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61 | virtual ~BaseArray();
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62 |
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63 | // Returns true if ndim and sizes are equal
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64 | virtual bool CompareSizes(const BaseArray& a, bool& smo) const;
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65 |
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66 | // Compacts \b size=1 array dimensions
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67 | virtual void CompactAllDim(); // suppresses all size==1 dimensions
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68 | virtual void CompactTrailingDim(); // suppresses size==1 dimensions after the last size>1 dimension
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69 |
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70 | // Array dimensions
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71 | //! Return true if the array was allocated ( Rank() > 0 )
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72 | inline bool IsAllocated() const { return( (ndim_ > 0) ? true : false ); }
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73 | //! Return number of dimensions (array rank)
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74 | inline int_4 NbDimensions() const { return( ndim_ ); }
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75 | //! Return array rank (number of dimensions)
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76 | inline int_4 Rank() const { return( ndim_ ); }
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77 |
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78 | //! Return total size of the array
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79 | inline sa_size_t Size() const { return(totsize_); }
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80 | //! Return size along the first dimension
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81 | inline sa_size_t SizeX() const { return(size_[0]); }
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82 | //! Return size along the second dimension
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83 | inline sa_size_t SizeY() const { return(size_[1]); }
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84 | //! Return size along the third dimension
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85 | inline sa_size_t SizeZ() const { return(size_[2]); }
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86 | //! Return size along the \b ka th dimension
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87 | inline sa_size_t Size(int_4 ka) const { return(size_[CheckDI(ka,1)]); }
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88 |
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89 | int_4 MaxSizeKA() const ;
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90 |
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91 | //! Get memory organization
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92 | inline short GetMemoryMapping() const
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93 | { return ( (marowi_ == 1) ? CMemoryMapping : FortranMemoryMapping) ; }
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94 | //! line index dimension
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95 | inline int_4 RowsKA() const {return marowi_; }
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96 | //! column index dimension
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97 | inline int_4 ColsKA() const {return macoli_; }
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98 | //! Index dimension of the elements of a vector
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99 | inline int_4 VectKA() const {return veceli_; }
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100 | void SetMemoryMapping(short mm=AutoMemoryMapping);
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101 |
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102 | //! Get Vector type ( \b Line or \b Column vector )
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103 | inline short GetVectorType() const
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104 | { return((marowi_ == veceli_) ? ColumnVector : RowVector); }
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105 | void SetVectorType(short vt=AutoVectorType);
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106 |
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107 | // memory organisation - packing information
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108 | //! return true if array is packed in memory
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109 | inline bool IsPacked() const { return(moystep_ == 1); }
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110 | //! return true if array is packed along the first dimension
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111 | inline bool IsPackedX() const { return(step_[0] == 1); }
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112 | //! return true if array is packed along the second dimension
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113 | inline bool IsPackedY() const { return(step_[1] == 1); }
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114 | //! return true if array is packed along the third dimension
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115 | inline bool IsPackedZ() const { return(step_[2] == 1); }
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116 | //! return true if array is packed along the \b ka th dimension
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117 | inline bool IsPacked(int_4 ka) const { return(step_[CheckDI(ka,2)] == 1); }
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118 |
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119 | //! return the minimum step value along all the dimensions
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120 | inline sa_size_t MinStep() const { return(minstep_); }
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121 | //! return the average step value along all the dimensions
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122 | inline sa_size_t AvgStep() const { return(moystep_); }
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123 | //! return the step along the first dimension
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124 | inline sa_size_t StepX() const { return(step_[0]); }
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125 | //! return the step along the second dimension
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126 | inline sa_size_t StepY() const { return(step_[1]); }
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127 | //! return the step along the third dimension
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128 | inline sa_size_t StepZ() const { return(step_[2]); }
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129 | //! return the step along the \b ka th dimension
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130 | inline sa_size_t Step(int_4 ka) const { return(step_[CheckDI(ka,3)]); }
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131 |
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132 | int_4 MinStepKA() const ;
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133 |
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134 | // Offset of element ip
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135 | sa_size_t Offset(sa_size_t ip=0) const ;
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136 | // Offset of the i'th vector along axe ka
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137 | sa_size_t Offset(int_4 ka, sa_size_t i) const ;
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138 | inline sa_size_t Offset(sa_size_t ix, sa_size_t iy, sa_size_t iz, sa_size_t it=0, sa_size_t iu=0) const;
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139 | // Index values of element ip
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140 | void IndexAtPosition(sa_size_t ip, sa_size_t & ix, sa_size_t & iy, sa_size_t & iz,
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141 | sa_size_t & it, sa_size_t & iu) const;
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142 | // an abstract element acces methode
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143 | virtual MuTyV & ValueAtPosition(sa_size_t ip) const = 0;
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144 |
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145 | // Pour recuperer pas et numero d'axe pour operations sur deux arrays
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146 | void GetOpeParams(const BaseArray& a, bool smo, int_4& ax, int_4& axa, sa_size_t& step,
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147 | sa_size_t& stepa, sa_size_t& gpas, sa_size_t& naxa) const;
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148 | // Impression, I/O, ...
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149 | void Show(ostream& os, bool si=false) const;
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150 | //! Show information on \b cout
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151 | inline void Show() const { Show(cout); }
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152 | virtual string InfoString() const;
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153 |
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154 | // DVList info Object
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155 | DVList& Info();
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156 |
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157 | protected:
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158 | inline int_4 CheckDI(int_4 ka, int msg) const ;
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159 | inline void CheckBound(sa_size_t ix, sa_size_t iy, sa_size_t iz, sa_size_t it, sa_size_t iu, int msg) const ;
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160 | // Changing Sizes/NDim ... return true if OK
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161 | bool UpdateSizes(int_4 ndim, const sa_size_t * siz, sa_size_t step, sa_size_t offset, string & exmsg);
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162 | bool UpdateSizes(int_4 ndim, const sa_size_t * siz, const sa_size_t * step, sa_size_t offset, string & exmsg);
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163 | bool UpdateSizes(const BaseArray& a, string & exmsg);
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164 | static sa_size_t ComputeTotalSize(int_4 ndim, const sa_size_t * siz, sa_size_t step, sa_size_t offset) ;
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165 | // Organisation memoire
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166 | static short SelectMemoryMapping(short mm);
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167 | static short SelectVectorType(short vt);
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168 | void UpdateMemoryMapping(short mm);
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169 | void UpdateMemoryMapping(BaseArray const & a, short mm);
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170 |
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171 | // Pour Extraction de sous-tableau
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172 | virtual void UpdateSubArraySizes(BaseArray & ra, int_4 ndim, sa_size_t * siz, sa_size_t * pos, sa_size_t * step) const;
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173 |
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174 | int_4 ndim_; //!< number of dimensions of array
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175 | sa_size_t size_[BASEARRAY_MAXNDIMS]; //!< array of the size in each dimension
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176 | sa_size_t totsize_; //!< Total number of elements
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177 | sa_size_t offset_; //!< global offset -\> position of elem[0] in DataBlock
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178 | //! two consecutive elements distance in a given dimension
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179 | sa_size_t step_[BASEARRAY_MAXNDIMS];
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180 | sa_size_t minstep_; //!< minimal step (in any axes)
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181 | sa_size_t moystep_; //!< mean step, if == 0 --\> non regular steps
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182 | int_2 marowi_; //!< For matrices, Row index in dimensions
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183 | int_2 macoli_; //!< For matrices, Column index in dimensions
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184 | int_2 veceli_; //!< For vectors, dimension index = marowi_/macoli_ (Row/Col vectors)
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185 | int_2 arrtype_; //!< 0 a TArray, 1 TMatrix , 2 TVector
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186 | DVList* mInfo; //!< Infos (variables) attached to the array
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187 |
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188 | static char * ck_op_msg_[6]; //!< Operation messages for CheckDI() CheckBound()
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189 | static sa_size_t max_nprt_; //!< maximum number of printed elements
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190 | static int_4 prt_lev_; //!< Print level
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191 | static short default_memory_mapping; //!< Default memory mapping
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192 | static short default_vector_type; //!< Default vector type Row/Column
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193 | static sa_size_t openmp_size_threshold; //!< Size limit for parallel routine calls
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194 | };
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195 |
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196 | // --------------------------------------------------
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197 | // Methodes inline de verification
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198 | // --------------------------------------------------
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199 | //! to verify the compatibility of the dimension index
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200 | inline int_4 BaseArray::CheckDI(int_4 ka, int msg) const
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201 | {
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202 | if ( (ka < 0) || (ka >= ndim_) ) {
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203 | string txt = "BaseArray::CheckDimensionIndex/Error "; txt += ck_op_msg_[msg];
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204 | throw(RangeCheckError(txt));
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205 | }
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206 | return(ka);
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207 | }
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208 |
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209 | //! to verify the compatibility of the indexes in all dimensions
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210 | inline void BaseArray::CheckBound(sa_size_t ix, sa_size_t iy, sa_size_t iz, sa_size_t it, sa_size_t iu, int msg) const
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211 | {
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212 | if ( (ix >= size_[0]) || (ix < 0) || (iy >= size_[1]) || (iy < 0) ||
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213 | (iz >= size_[2]) || (iz < 0) || (it >= size_[3]) || (it < 0) ||
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214 | (iu >= size_[4]) || (iu < 0) ) {
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215 | string txt = "BaseArray::CheckArrayBound/Error "; txt += ck_op_msg_[msg];
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216 | throw(RangeCheckError(txt));
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217 | }
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218 | return;
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219 | }
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220 |
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221 |
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222 |
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223 | // --------------------------------------------------
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224 | // Position d'un element
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225 | // --------------------------------------------------
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226 | //! Offset of element (ix,iy,iz,it,iu)
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227 | inline sa_size_t BaseArray::Offset(sa_size_t ix, sa_size_t iy, sa_size_t iz, sa_size_t it, sa_size_t iu) const
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228 | {
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229 | #ifdef SO_BOUNDCHECKING
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230 | CheckBound(ix, iy, iz, it, iu, 4);
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231 | #endif
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232 | return ( offset_+ ix*step_[0] + iy*step_[1] + iz*step_[2] +
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233 | it*step_[3] + iu*step_[4] );
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234 | }
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235 |
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236 |
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237 | } // Fin du namespace
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238 |
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239 | #endif
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