source: Sophya/trunk/SophyaLib/TArray/basarr.h@ 2888

Last change on this file since 2888 was 2888, checked in by ansari, 20 years ago

Ajout de la methode BaseArray::ValueAtPositionDB() pour corriger un gros bug au niveau de la conversion de type (r_4 r_8 ...) des tableaux - Reza 4 Jan 2006

File size: 10.5 KB
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1// This may look like C code, but it is really -*- C++ -*-
2// Base array class - Memory organisation management
3// R. Ansari, C.Magneville 03/2000
4
5#ifndef BaseArray_SEEN
6#define BaseArray_SEEN
7
8#include "machdefs.h"
9#include <math.h>
10#include <iostream>
11#include "anydataobj.h"
12#include "mutyv.h"
13#include "dvlist.h"
14
15
16//! Maximum number of dimensions for an array
17/*! \anchor BASEARRAY_MAXNDIMS */
18#define BASEARRAY_MAXNDIMS 5
19
20namespace SOPHYA {
21
22// ------------ classe template Array -----------
23//! Base class for template arrays
24class BaseArray : public AnyDataObj {
25public:
26 //! To define Array or Matrix memory mapping
27 enum MemoryMapping {
28 AutoMemoryMapping = -1, //!< define Auto Memory Mapping
29 SameMemoryMapping = 0, //!< define Same Memory Mapping
30 CMemoryMapping = 1, //!< define C Memory Mapping
31 FortranMemoryMapping = 2 //!< define Fortran Memory Mapping
32 };
33 //! To define Vector type
34 enum VectorType {
35 AutoVectorType = -1, //!< define Auto Vector Type
36 SameVectorType = 0, //!< define Same Vector Type
37 ColumnVector = 1, //!< define Column Vector Type
38 RowVector = 2 //!< define Row Vector Type
39 };
40
41 // threshold for parallel routine call
42 static void SetOpenMPSizeThreshold(sa_size_t thr=200000);
43 //! Get Size threshold for parallel routine call
44 static inline sa_size_t GetOpenMPSizeThreshold() { return openmp_size_threshold; }
45
46 static void SetMaxPrint(sa_size_t nprt=50, int_4 lev=0);
47 //! Get maximum number of printed elements
48 static inline sa_size_t GetMaxPrint() { return max_nprt_; }
49 //! Get print level
50 static inline int_4 GetPrintLevel() { return prt_lev_; }
51
52 static short SetDefaultMemoryMapping(short mm=CMemoryMapping);
53 //! Get Default Memory Mapping
54 static inline short GetDefaultMemoryMapping() { return default_memory_mapping; }
55 static short SetDefaultVectorType(short vt=ColumnVector);
56 //! Get Default Vector Type
57 static inline short GetDefaultVectorType() { return default_vector_type; }
58
59 //! Optimization choice for matrix product
60 static void SetMatProdOpt(uint_2 opt=1);
61 static inline uint_2 GetMatProdOpt(void) {return matrix_product_optim;}
62
63 // Creator / destructor
64 BaseArray();
65 virtual ~BaseArray();
66
67 // Returns true if ndim and sizes are equal
68 virtual bool CompareSizes(const BaseArray& a, bool& smo) const;
69
70 // Compacts \b size=1 array dimensions
71 virtual void CompactAllDim(); // suppresses all size==1 dimensions
72 virtual void CompactTrailingDim(); // suppresses size==1 dimensions after the last size>1 dimension
73
74 // Array dimensions
75 //! Return true if the array was allocated ( Rank() > 0 )
76 inline bool IsAllocated() const { return( (ndim_ > 0) ? true : false ); }
77 //! Return number of dimensions (array rank)
78 inline int_4 NbDimensions() const { return( ndim_ ); }
79 //! Return array rank (number of dimensions)
80 inline int_4 Rank() const { return( ndim_ ); }
81
82 //! Return total size of the array
83 inline sa_size_t Size() const { return(totsize_); }
84 //! Return size along the first dimension
85 inline sa_size_t SizeX() const { return(size_[0]); }
86 //! Return size along the second dimension
87 inline sa_size_t SizeY() const { return(size_[1]); }
88 //! Return size along the third dimension
89 inline sa_size_t SizeZ() const { return(size_[2]); }
90 //! Return size along the \b ka th dimension
91 inline sa_size_t Size(int_4 ka) const { return(size_[CheckDI(ka,1)]); }
92
93 int_4 MaxSizeKA() const ;
94
95 //! Get memory organization
96 inline short GetMemoryMapping() const
97 { return ( (marowi_ == 1) ? CMemoryMapping : FortranMemoryMapping) ; }
98 //! line index dimension
99 inline int_4 RowsKA() const {return marowi_; }
100 //! column index dimension
101 inline int_4 ColsKA() const {return macoli_; }
102 //! Index dimension of the elements of a vector
103 inline int_4 VectKA() const {return veceli_; }
104 void SetMemoryMapping(short mm=AutoMemoryMapping);
105
106 //! Get Vector type ( \b Line or \b Column vector )
107 inline short GetVectorType() const
108 { return((marowi_ == veceli_) ? ColumnVector : RowVector); }
109 void SetVectorType(short vt=AutoVectorType);
110
111 // memory organisation - packing information
112 //! return true if array is packed in memory
113 inline bool IsPacked() const { return(moystep_ == 1); }
114 //! return true if array is packed along the first dimension
115 inline bool IsPackedX() const { return(step_[0] == 1); }
116 //! return true if array is packed along the second dimension
117 inline bool IsPackedY() const { return(step_[1] == 1); }
118 //! return true if array is packed along the third dimension
119 inline bool IsPackedZ() const { return(step_[2] == 1); }
120 //! return true if array is packed along the \b ka th dimension
121 inline bool IsPacked(int_4 ka) const { return(step_[CheckDI(ka,2)] == 1); }
122
123 //! return the minimum step value along all the dimensions
124 inline sa_size_t MinStep() const { return(minstep_); }
125 //! return the average step value along all the dimensions
126 inline sa_size_t AvgStep() const { return(moystep_); }
127 //! return the step along the first dimension
128 inline sa_size_t StepX() const { return(step_[0]); }
129 //! return the step along the second dimension
130 inline sa_size_t StepY() const { return(step_[1]); }
131 //! return the step along the third dimension
132 inline sa_size_t StepZ() const { return(step_[2]); }
133 //! return the step along the \b ka th dimension
134 inline sa_size_t Step(int_4 ka) const { return(step_[CheckDI(ka,3)]); }
135
136 int_4 MinStepKA() const ;
137
138 // Offset of element ip
139 sa_size_t Offset(sa_size_t ip=0) const ;
140 // Offset of the i'th vector along axe ka
141 sa_size_t Offset(int_4 ka, sa_size_t i) const ;
142 inline sa_size_t Offset(sa_size_t ix, sa_size_t iy, sa_size_t iz, sa_size_t it=0, sa_size_t iu=0) const;
143 // Index values of element ip
144 void IndexAtPosition(sa_size_t ip, sa_size_t & ix, sa_size_t & iy, sa_size_t & iz,
145 sa_size_t & it, sa_size_t & iu) const;
146 // an abstract element acces methode
147 virtual MuTyV & ValueAtPosition(sa_size_t ip) const = 0;
148 virtual MuTyV & ValueAtPositionDB(sa_size_t ip) const = 0;
149
150 // Pour recuperer pas et numero d'axe pour operations sur deux arrays
151 void GetOpeParams(const BaseArray& a, bool smo, int_4& ax, int_4& axa, sa_size_t& step,
152 sa_size_t& stepa, sa_size_t& gpas, sa_size_t& naxa) const;
153 // Impression, I/O, ...
154 void Show(ostream& os, bool si=false) const;
155 //! Show information on \b cout
156 inline void Show() const { Show(cout); }
157 virtual string InfoString() const;
158
159 // Lecture,Ecriture sur fichier ASCII
160 //! Reads an array from an ASCII stream
161 virtual sa_size_t ReadASCII(istream& is, sa_size_t & nr, sa_size_t & nc,
162 char clm='#', const char* sep=" \t") = 0;
163 //! Writes an array to an ASCII stream
164 virtual void WriteASCII(ostream& os) const = 0;
165
166 // DVList info Object
167 DVList& Info();
168
169protected:
170 inline int_4 CheckDI(int_4 ka, int msg) const ;
171 inline void CheckBound(sa_size_t ix, sa_size_t iy, sa_size_t iz, sa_size_t it, sa_size_t iu, int msg) const ;
172 // Changing Sizes/NDim ... return true if OK
173 bool UpdateSizes(int_4 ndim, const sa_size_t * siz, sa_size_t step, sa_size_t offset, string & exmsg);
174 bool UpdateSizes(int_4 ndim, const sa_size_t * siz, const sa_size_t * step, sa_size_t offset, string & exmsg);
175 bool UpdateSizes(const BaseArray& a, string & exmsg);
176 static sa_size_t ComputeTotalSize(int_4 ndim, const sa_size_t * siz, sa_size_t step, sa_size_t offset) ;
177 // Organisation memoire
178 static short SelectMemoryMapping(short mm);
179 static short SelectVectorType(short vt);
180 void UpdateMemoryMapping(short mm);
181 void UpdateMemoryMapping(BaseArray const & a, short mm);
182
183 // Pour Extraction de sous-tableau
184 virtual void UpdateSubArraySizes(BaseArray & ra, int_4 ndim, sa_size_t * siz, sa_size_t * pos, sa_size_t * step) const;
185
186 int_4 ndim_; //!< number of dimensions of array
187 sa_size_t size_[BASEARRAY_MAXNDIMS]; //!< array of the size in each dimension
188 sa_size_t totsize_; //!< Total number of elements
189 sa_size_t offset_; //!< global offset -\> position of elem[0] in DataBlock
190 //! two consecutive elements distance in a given dimension
191 sa_size_t step_[BASEARRAY_MAXNDIMS];
192 sa_size_t minstep_; //!< minimal step (in any axes)
193 sa_size_t moystep_; //!< mean step, if == 0 --\> non regular steps
194 int_2 marowi_; //!< For matrices, Row index in dimensions
195 int_2 macoli_; //!< For matrices, Column index in dimensions
196 int_2 veceli_; //!< For vectors, dimension index = marowi_/macoli_ (Row/Col vectors)
197 int_2 arrtype_; //!< 0 a TArray, 1 TMatrix , 2 TVector
198 DVList* mInfo; //!< Infos (variables) attached to the array
199
200 static char * ck_op_msg_[6]; //!< Operation messages for CheckDI() CheckBound()
201 static sa_size_t max_nprt_; //!< maximum number of printed elements
202 static int_4 prt_lev_; //!< Print level
203 static short default_memory_mapping; //!< Default memory mapping
204 static short default_vector_type; //!< Default vector type Row/Column
205 static sa_size_t openmp_size_threshold; //!< Size limit for parallel routine calls
206 static uint_2 matrix_product_optim; //!< optimization level for matrix product
207};
208
209// --------------------------------------------------
210// Methodes inline de verification
211// --------------------------------------------------
212//! to verify the compatibility of the dimension index
213inline int_4 BaseArray::CheckDI(int_4 ka, int msg) const
214{
215 if ( (ka < 0) || (ka >= ndim_) ) {
216 string txt = "BaseArray::CheckDimensionIndex/Error "; txt += ck_op_msg_[msg];
217 throw(RangeCheckError(txt));
218 }
219 return(ka);
220}
221
222//! to verify the compatibility of the indexes in all dimensions
223inline void BaseArray::CheckBound(sa_size_t ix, sa_size_t iy, sa_size_t iz, sa_size_t it, sa_size_t iu, int msg) const
224{
225 if ( (ix >= size_[0]) || (ix < 0) || (iy >= size_[1]) || (iy < 0) ||
226 (iz >= size_[2]) || (iz < 0) || (it >= size_[3]) || (it < 0) ||
227 (iu >= size_[4]) || (iu < 0) ) {
228 string txt = "BaseArray::CheckArrayBound/Error "; txt += ck_op_msg_[msg];
229 throw(RangeCheckError(txt));
230 }
231 return;
232}
233
234
235
236// --------------------------------------------------
237// Position d'un element
238// --------------------------------------------------
239//! Offset of element (ix,iy,iz,it,iu)
240inline sa_size_t BaseArray::Offset(sa_size_t ix, sa_size_t iy, sa_size_t iz, sa_size_t it, sa_size_t iu) const
241{
242#ifdef SO_BOUNDCHECKING
243 CheckBound(ix, iy, iz, it, iu, 4);
244#endif
245 return ( offset_+ ix*step_[0] + iy*step_[1] + iz*step_[2] +
246 it*step_[3] + iu*step_[4] );
247}
248
249
250} // Fin du namespace
251
252#endif
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