| [785] | 1 | //     Utility classes for template numerical arrays | 
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|  | 2 | //                     R. Ansari, C.Magneville   03/2000 | 
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|  | 3 |  | 
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| [2615] | 4 | #include "sopnamsp.h" | 
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| [785] | 5 | #include "machdefs.h" | 
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|  | 6 | #include "utilarr.h" | 
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| [3394] | 7 | #include "stsrand.h" | 
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| [785] | 8 |  | 
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|  | 9 | // Classe utilitaires | 
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| [850] | 10 |  | 
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| [1103] | 11 | Sequence::~Sequence() | 
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|  | 12 | { | 
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|  | 13 | } | 
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|  | 14 |  | 
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| [894] | 15 | ////////////////////////////////////////////////////////// | 
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| [926] | 16 | /*! | 
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|  | 17 | \class SOPHYA::RandomSequence | 
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|  | 18 | \ingroup TArray | 
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| [1404] | 19 | Base class to generate a sequence of random values | 
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| [926] | 20 | */ | 
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|  | 21 |  | 
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| [894] | 22 | //! Constructor | 
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|  | 23 | /*! | 
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|  | 24 | \param typ : generator type | 
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|  | 25 | \param m : mean parameter of the generator (if needed) | 
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|  | 26 | \param s : sigma parameter of the generator (if needed) | 
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|  | 27 | */ | 
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| [3394] | 28 | static RandomGenerator* uarg_ = NULL; | 
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| [850] | 29 | RandomSequence::RandomSequence(int typ, double m, double s) | 
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|  | 30 | { | 
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|  | 31 | typ_ = (typ == Flat) ? Flat : Gaussian; | 
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|  | 32 | mean_ = m; | 
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|  | 33 | sig_ = s; | 
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| [3394] | 34 | if (uarg_ == NULL) uarg_ = new RandomGenerator(1024, true); | 
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| [850] | 35 | } | 
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| [1103] | 36 | RandomSequence::~RandomSequence() | 
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|  | 37 | { | 
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|  | 38 | } | 
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| [850] | 39 |  | 
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| [894] | 40 | //! Return random sequence values. | 
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| [935] | 41 | /*! | 
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|  | 42 | \return If typ = Flat : return [-1,+1]*sig + mean | 
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|  | 43 | \return If typ = Gaussian : return gaussian distributed | 
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|  | 44 | with \b mean mean and sigma \b sig | 
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|  | 45 | */ | 
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| [850] | 46 | double RandomSequence::Rand() | 
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|  | 47 | { | 
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|  | 48 | if (typ_ == Flat) | 
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| [3394] | 49 | return(uarg_->Flatpm1()*sig_ + mean_); | 
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|  | 50 | else return(uarg_->Gaussian(sig_, mean_)); | 
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| [850] | 51 | } | 
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|  | 52 |  | 
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| [1156] | 53 | MuTyV & RandomSequence::Value(sa_size_t k) const | 
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| [1103] | 54 | { | 
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| [3394] | 55 | if (typ_ == Flat) retv_ = uarg_->Flatpm1()*sig_ + mean_; | 
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|  | 56 | else retv_ = uarg_->Gaussian(sig_, mean_); | 
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| [1103] | 57 | return retv_; | 
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|  | 58 | } | 
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| [850] | 59 |  | 
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| [1103] | 60 |  | 
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| [894] | 61 | ////////////////////////////////////////////////////////// | 
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| [926] | 62 | /*! | 
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| [1103] | 63 | \class SOPHYA::RegularSequence | 
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| [926] | 64 | \ingroup TArray | 
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|  | 65 | Class to generate a sequence of values | 
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|  | 66 | */ | 
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|  | 67 |  | 
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| [894] | 68 | //! Constructor | 
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|  | 69 | /*! | 
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|  | 70 | \param start : start value | 
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|  | 71 | \param step : step value | 
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| [1404] | 72 | \param f : pointer to the sequence function (default = NULL, f(x)=x ) | 
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| [894] | 73 |  | 
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| [1103] | 74 | See \ref RegularSequenceOperat "operator()" | 
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| [894] | 75 | */ | 
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| [1103] | 76 | RegularSequence::RegularSequence(double start, double step, Arr_DoubleFunctionOfX f) | 
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| [785] | 77 | { | 
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|  | 78 | start_ = start; | 
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|  | 79 | step_ = step; | 
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|  | 80 | myf_ = f; | 
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|  | 81 | } | 
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|  | 82 |  | 
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| [1103] | 83 | RegularSequence::~RegularSequence() | 
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| [850] | 84 | { | 
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|  | 85 | } | 
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|  | 86 |  | 
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| [894] | 87 | //! Get the \b k th value | 
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|  | 88 | /*! | 
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|  | 89 | \param k : index of the value | 
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| [1103] | 90 | \anchor RegularSequenceOperat | 
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| [1404] | 91 |  | 
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|  | 92 | \return f(start+k*step) | 
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| [894] | 93 |  | 
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|  | 94 | */ | 
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| [1103] | 95 |  | 
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| [1156] | 96 | MuTyV & RegularSequence::Value (sa_size_t k) const | 
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| [785] | 97 | { | 
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| [1103] | 98 | double x = start_+(double)k*step_; | 
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|  | 99 | if (myf_)  x = myf_(x); | 
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|  | 100 | retv_ = x; | 
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|  | 101 | return(retv_); | 
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| [785] | 102 | } | 
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|  | 103 |  | 
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| [1404] | 104 | /*! | 
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|  | 105 | \class SOPHYA::EnumeratedSequence | 
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|  | 106 | \ingroup TArray | 
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|  | 107 | Explicitly defined sequence of values. The comma operator has | 
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|  | 108 | been redefined to let an easy definition of sequences. | 
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|  | 109 |  | 
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|  | 110 | \code | 
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|  | 111 | // Initializing a sequence | 
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|  | 112 | EnumeratedSequence es; | 
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|  | 113 | es = 11, 22, 33, 44, 55, 66; | 
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|  | 114 |  | 
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|  | 115 | for(int k=0; k<8; k++) | 
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|  | 116 | cout << " k= " << k << " es(k)= " << es(k) << endl; | 
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| [1558] | 117 |  | 
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|  | 118 | // Decoding a sequence from a string | 
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|  | 119 | EnumeratedSequence ess; | 
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|  | 120 | int nbad; | 
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|  | 121 | ess.Append("56.5 (1.,-1.) 4 8 16", nbad); | 
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|  | 122 | cout << ess; | 
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| [1404] | 123 | \endcode | 
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|  | 124 | */ | 
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|  | 125 |  | 
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| [1558] | 126 | //! Default constructor | 
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| [1404] | 127 | EnumeratedSequence::EnumeratedSequence() | 
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|  | 128 | { | 
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|  | 129 | } | 
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|  | 130 |  | 
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| [1558] | 131 | //! Copy constructor | 
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|  | 132 | EnumeratedSequence::EnumeratedSequence(EnumeratedSequence const & es) | 
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|  | 133 | { | 
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|  | 134 | Append(es); | 
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|  | 135 | } | 
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|  | 136 |  | 
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| [1103] | 137 | EnumeratedSequence::~EnumeratedSequence() | 
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|  | 138 | { | 
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|  | 139 | } | 
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|  | 140 |  | 
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| [1404] | 141 | //! Return the k th value in the sequence (default = 0) | 
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| [1156] | 142 | MuTyV & EnumeratedSequence::Value (sa_size_t k) const | 
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| [1103] | 143 | { | 
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|  | 144 | if (k >= vecv_.size())  retv_ = 0; | 
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|  | 145 | else retv_ = vecv_[k]; | 
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|  | 146 | return(retv_); | 
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|  | 147 | } | 
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|  | 148 |  | 
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| [1558] | 149 | //! Appends a new value to the sequence | 
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| [1103] | 150 | EnumeratedSequence & EnumeratedSequence::operator , (MuTyV const & v) | 
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|  | 151 | { | 
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|  | 152 | vecv_.push_back(v); | 
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|  | 153 | return(*this); | 
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|  | 154 | } | 
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|  | 155 |  | 
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| [1558] | 156 | //! Initialize the sequence with a single value \b v | 
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| [1156] | 157 | EnumeratedSequence & EnumeratedSequence::operator = (MuTyV const & v) | 
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|  | 158 | { | 
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|  | 159 | vecv_.clear(); | 
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|  | 160 | vecv_.push_back(v); | 
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|  | 161 | return(*this); | 
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|  | 162 | } | 
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|  | 163 |  | 
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| [1558] | 164 | //! Copy operator | 
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|  | 165 | EnumeratedSequence & EnumeratedSequence::operator = (EnumeratedSequence const & seq) | 
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| [1550] | 166 | { | 
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| [1558] | 167 | Clear(); | 
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|  | 168 | Append(seq); | 
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|  | 169 | return(*this); | 
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| [1550] | 170 | } | 
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|  | 171 |  | 
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| [1558] | 172 |  | 
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|  | 173 | //! Prints the list to the output stream \b os | 
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| [1550] | 174 | void EnumeratedSequence::Print(ostream& os) const | 
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|  | 175 | { | 
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|  | 176 | os << " EnumeratedSequence::Print() - Size()= " << Size() << endl; | 
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|  | 177 | for(int k=0; k<vecv_.size(); k++) { | 
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|  | 178 | os << vecv_[k]; | 
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|  | 179 | if ((k > 0) && (k%10 == 0))  os << endl; | 
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|  | 180 | else os << " " ; | 
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|  | 181 | } | 
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| [1558] | 182 | os << endl; | 
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| [1550] | 183 | return; | 
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|  | 184 | } | 
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|  | 185 |  | 
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| [1558] | 186 | //! Append the \b seq to the end of the sequence. | 
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|  | 187 | /*! | 
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|  | 188 | \return the number of added elements. | 
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|  | 189 | */ | 
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|  | 190 | sa_size_t EnumeratedSequence::Append(EnumeratedSequence const & seq) | 
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| [1550] | 191 | { | 
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| [1558] | 192 | for(int k=0; k<seq.vecv_.size(); k++) | 
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|  | 193 | vecv_.push_back(seq.vecv_[k]); | 
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|  | 194 | return(seq.vecv_.size()); | 
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| [1550] | 195 | } | 
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|  | 196 |  | 
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| [1558] | 197 | //! Decodes the string, appending values to the end of the sequence. | 
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|  | 198 | /*! | 
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|  | 199 | \param str : string to be decoded | 
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| [2286] | 200 | \param nbad : number of unmatched quotes or parenthesis (returned value) | 
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|  | 201 | \param sep : word separator in string. Each word is decoded as a MuTyV value. | 
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| [1558] | 202 | \return the number of added elements. | 
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|  | 203 | */ | 
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| [2286] | 204 | sa_size_t EnumeratedSequence::Append(string const & str, int& nbad, const char* sep) | 
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| [1558] | 205 | { | 
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|  | 206 | nbad = 0; | 
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|  | 207 | sa_size_t n = 0; | 
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|  | 208 | size_t l = str.length(); | 
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|  | 209 | if (l < 1) return(0); | 
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| [2286] | 210 | //  if ((str[0] == '#') || (str[0] == '*')) return(0); | 
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| [1558] | 211 | size_t q = 0; | 
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| [2286] | 212 | size_t p = 0; | 
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|  | 213 | /* | 
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|  | 214 | size_t p = str.find_first_not_of(sep); | 
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| [1558] | 215 | if ((str[p] == '+') || (str[p] == '-')) { | 
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|  | 216 | if (p == l-1)  return(0); | 
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|  | 217 | if (!isdigit(str[p+1])) return(0); | 
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|  | 218 | } | 
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|  | 219 | else if (!isdigit(str[p]) && (str[p] != '\'') && (str[p] != '(') ) return(0); | 
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| [2286] | 220 | */ | 
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| [1558] | 221 | while(q < l) { | 
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| [2286] | 222 | p = str.find_first_not_of(sep,q); | 
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| [1558] | 223 | if (p >= l)  break; | 
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|  | 224 | if (str[p] == '\'')    {  // Decodage d'un string | 
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|  | 225 | q = str.find('\'',p+1); | 
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|  | 226 | if (q < l) { | 
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|  | 227 | vecv_.push_back(MuTyV(str.substr(p+1,q-p-1))); | 
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|  | 228 | n++;    q++; | 
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|  | 229 | } | 
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|  | 230 | else nbad++; | 
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|  | 231 | } | 
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|  | 232 | else if (str[p] == '(')    {  // Decodage d'un complex | 
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|  | 233 | q = str.find(')',p); | 
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|  | 234 | if (q < l) { | 
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|  | 235 | q++; | 
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|  | 236 | MuTyV mtv(str.substr(p,q-p)); | 
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| [2149] | 237 | complex<r_8> z = mtv.operator complex<r_8>(); | 
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| [1558] | 238 | vecv_.push_back(MuTyV(z)); | 
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|  | 239 | n++; | 
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|  | 240 | } | 
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|  | 241 | else nbad++; | 
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|  | 242 | } | 
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|  | 243 | else { | 
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| [2286] | 244 | q = str.find_first_of(sep,p); | 
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| [2288] | 245 | if ( !isdigit(str[p]) && !(str[p] == '+') | 
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|  | 246 | && !(str[p] == '-') && !(str[p] == '.') ) { // une chaine | 
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| [2286] | 247 | vecv_.push_back(MuTyV(str.substr(p,q-p))); | 
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| [2288] | 248 | n++; | 
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| [1558] | 249 | } | 
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|  | 250 | else {  // C'est un nombre | 
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| [2288] | 251 | if (str.find_first_of(".eE",p) < q)   { // c'est un flottant | 
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| [1558] | 252 | r_8 x = atof(str.substr(p,q-p).c_str()); | 
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|  | 253 | vecv_.push_back(MuTyV(x)); | 
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|  | 254 | } | 
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|  | 255 | else {   // un entier | 
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|  | 256 | int_8 l = atol(str.substr(p,q-p).c_str()); | 
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|  | 257 | vecv_.push_back(MuTyV(l)); | 
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|  | 258 | } | 
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|  | 259 | n++; | 
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|  | 260 | } | 
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|  | 261 | } | 
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|  | 262 | } | 
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|  | 263 | return (n); | 
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|  | 264 | } | 
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|  | 265 |  | 
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|  | 266 | //! Decodes the input ASCII stream, creating a sequence of values | 
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|  | 267 | /*! \param is : Input ASCII stream | 
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|  | 268 | \param nr : Number of non empty (or comment) lines in stream (return value) | 
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|  | 269 | \param nc : Number of columns (= ntot/nlines) (return value) | 
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| [2286] | 270 | \param clm : Lines starting with clm character are treated as comment lines | 
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|  | 271 | \param sep : word separator in lines | 
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| [1558] | 272 | \return Number of decoded elements | 
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|  | 273 | */ | 
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| [2286] | 274 | sa_size_t EnumeratedSequence::FillFromFile(istream& is, sa_size_t& nr, sa_size_t& nc, | 
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|  | 275 | char clm, const char* sep) | 
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| [1550] | 276 | { | 
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| [1558] | 277 | nr = 0; | 
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|  | 278 | nc = 0; | 
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|  | 279 | sa_size_t n = 0; | 
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|  | 280 | char buff[256]; | 
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|  | 281 | string line; | 
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|  | 282 | int nbad, nbadtot, nel; | 
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|  | 283 | nbadtot = nbad = 0; | 
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|  | 284 | while (!is.eof()) { | 
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| [2795] | 285 | /* Reza, Juin 2005 : Remplace par getline(istream, string) - plus sur | 
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|  | 286 | is.clear(); | 
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|  | 287 | is.getline(buff, 256);    line += buff;  nel = 0; */ | 
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|  | 288 | line = ""; | 
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|  | 289 | getline(is, line); | 
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|  | 290 | if (is.good() || is.eof()) { | 
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| [2286] | 291 | if ((line.length() > 0) && (line[0]!=clm)) { | 
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| [2752] | 292 | nel = Append(line, nbad, sep); | 
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| [2286] | 293 | if (nel > 0)  { | 
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|  | 294 | nr++;  n += nel; | 
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|  | 295 | } | 
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|  | 296 | nbadtot += nbad; | 
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| [1558] | 297 | } | 
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|  | 298 | } | 
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|  | 299 | } | 
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| [2795] | 300 | /* Reza, Juin 2005 : plus necessaire | 
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| [2286] | 301 | if ((line.length() > 0) && (line[0]!=clm)) { | 
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| [2752] | 302 | nel = Append(line, nbad, sep); | 
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| [2795] | 303 | if (nel > 0)  {       nr++;  n += nel; } | 
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|  | 304 | nbadtot += nbad;    line = ""; } | 
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|  | 305 | */ | 
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| [1558] | 306 | if (nbadtot > 0) | 
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|  | 307 | cout << "EnumeratedSequence::FillFromFile()/Warning " << nbadtot | 
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|  | 308 | << " bad match (quotes or parenthesis) in stream " << endl; | 
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|  | 309 | nc = n/nr; | 
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|  | 310 | return (n); | 
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| [1550] | 311 | } | 
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|  | 312 |  | 
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| [894] | 313 | ////////////////////////////////////////////////////////// | 
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| [926] | 314 | /*! | 
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|  | 315 | \class SOPHYA::Range | 
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|  | 316 | \ingroup TArray | 
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| [2917] | 317 | This class can be used to define a range of indices. Range objects are used to extract | 
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|  | 318 | sub-arrays and slices, from arrays and matrices. | 
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|  | 319 | \sa SOPHYA::TArray SOPHYA::TMatrix | 
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| [926] | 320 | */ | 
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|  | 321 |  | 
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| [894] | 322 | /*! | 
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| [2917] | 323 | Constructor defining a range corresponding to the single index \b start | 
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|  | 324 | \param start : start=end index | 
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| [2915] | 325 | */ | 
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|  | 326 | Range::Range(sa_size_t start) | 
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|  | 327 | { | 
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|  | 328 | start_ = start; | 
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| [2917] | 329 | end_ = start; | 
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|  | 330 | size_ = 1; | 
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| [2915] | 331 | step_ = 1; | 
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|  | 332 | } | 
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|  | 333 |  | 
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|  | 334 | /*! | 
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|  | 335 | Constructor defining defining the range of indices, from \b start to \b end | 
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|  | 336 | \param start : start index (inclusive) | 
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| [1412] | 337 | \param end : end index (inclusive) | 
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| [2915] | 338 | */ | 
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|  | 339 | Range::Range(sa_size_t start, sa_size_t end) | 
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|  | 340 | { | 
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|  | 341 | start_ = start; | 
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|  | 342 | end_ = end; | 
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|  | 343 | if (end >= start)   size_ = end-start+1; | 
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|  | 344 | else size_ = 0; | 
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|  | 345 | step_ = 1; | 
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|  | 346 | } | 
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| [894] | 347 |  | 
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| [2915] | 348 | /*! | 
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|  | 349 | Constructor defining defining the range of indices, from \b start to \b end | 
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|  | 350 | \param start : start index (inclusive) | 
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|  | 351 | \param end : end index (inclusive) | 
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|  | 352 | \param step : step (or stride) = index increment | 
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|  | 353 | */ | 
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|  | 354 | Range::Range(sa_size_t start, sa_size_t end, sa_size_t step) | 
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|  | 355 | { | 
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|  | 356 | start_ = start; | 
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|  | 357 | end_ = end; | 
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|  | 358 | step_ = (step > 0) ? step : 1; | 
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|  | 359 | if (step < 1) step = 1; | 
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|  | 360 | if (end >= start) | 
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|  | 361 | size_ = (end-start)/step_+1; | 
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|  | 362 | else size_ = 0; | 
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|  | 363 | } | 
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|  | 364 |  | 
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|  | 365 | /*! | 
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|  | 366 | Define a range of indices | 
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|  | 367 | \param start : start index (inclusive) | 
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|  | 368 | \param end : end index (inclusive, used if size \<= 0 and end \>= start) | 
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|  | 369 | \param size : size (number of elements, used if \>= 1 ) | 
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|  | 370 | \param step : step (or stride) = index increment | 
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|  | 371 |  | 
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|  | 372 | \warning If \b size \>= 1 , \b end index computed automatically. | 
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|  | 373 | If \b size \< 1 and \b end < \b start , equivalent to \b end = Range()::lastIndex() | 
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| [894] | 374 | */ | 
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| [1156] | 375 | Range::Range(sa_size_t start, sa_size_t end, sa_size_t size, sa_size_t step) | 
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| [785] | 376 | { | 
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|  | 377 | start_ = start; | 
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|  | 378 | step_ = (step > 0) ? step : 1; | 
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| [2915] | 379 | if (size > 0) {  // Nb d'elements fixe | 
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| [813] | 380 | size_ = size; | 
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| [2917] | 381 | if ( (start == end) && (end == Range::lastIndex()) ) start_ = end_ = end; | 
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|  | 382 | else end_ = start_+(size_-1)*step_; | 
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| [813] | 383 | } | 
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| [2915] | 384 | else { | 
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|  | 385 | if (end >= start) {  // Indice de fin fixe | 
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|  | 386 | end_ = end; | 
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|  | 387 | size_ = (end-start)/step_+1; | 
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|  | 388 | } | 
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|  | 389 | else {  // rien fixe | 
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|  | 390 | size_ = 0; | 
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|  | 391 | end_ = Range::lastIndex(); | 
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|  | 392 | } | 
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|  | 393 | } | 
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| [785] | 394 | } | 
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|  | 395 |  | 
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| [804] | 396 | /* | 
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| [2915] | 397 | Range::Range(Range const& a) | 
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|  | 398 | { | 
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|  | 399 | start_ = a.start_; | 
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|  | 400 | end_ = a.end_; | 
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|  | 401 | size_ = a.size_; | 
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|  | 402 | step_ = a.step_; | 
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|  | 403 | } | 
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|  | 404 | */ | 
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|  | 405 |  | 
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|  | 406 | /*! | 
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|  | 407 | This method is called to recompute index ranges, specifying the original array size | 
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|  | 408 | by the TArray<T> (or derived classes) sub array extraction methods | 
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|  | 409 | */ | 
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|  | 410 | void Range::Update(sa_size_t osz) | 
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|  | 411 | { | 
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| [2917] | 412 | if (end_ >= 0)  return; | 
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| [2915] | 413 | if (osz == 0) { | 
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|  | 414 | start_ = end_ = 0; | 
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|  | 415 | size_ = step_ = 1; | 
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|  | 416 | return; | 
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|  | 417 | } | 
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|  | 418 | if (end_ == start_) { | 
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|  | 419 | end_ = osz-1; | 
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|  | 420 | if ((size_ > 0) && (size_ <= osz/step_)) | 
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| [2917] | 421 | start_ = end_ - (size_-1)*step_; | 
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| [2915] | 422 | else { | 
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|  | 423 | start_ = end_; | 
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|  | 424 | size_ = 1; | 
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|  | 425 | } | 
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|  | 426 | } | 
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|  | 427 | else { | 
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|  | 428 | end_ = osz-1; | 
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|  | 429 | size_ = (end_-start_)/step_+1; | 
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|  | 430 | } | 
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| [2917] | 431 | //DBG  cout << ">>> DBG/Update start=" << start_ << " end=" << end_ | 
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|  | 432 | //DBG     << " size=" << size_ << " step=" << step_ << endl; | 
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| [2915] | 433 | return; | 
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|  | 434 | } | 
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|  | 435 |  | 
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|  | 436 | /* | 
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| [1156] | 437 | Range & Range::operator = (sa_size_t start) | 
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| [785] | 438 | { | 
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|  | 439 | start_ = start; | 
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|  | 440 | size_ = 1; | 
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|  | 441 | step_ = 1; | 
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|  | 442 | return (*this); | 
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|  | 443 | } | 
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| [804] | 444 | */ | 
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|  | 445 |  | 
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|  | 446 |  | 
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| [894] | 447 | ////////////////////////////////////////////////////////// | 
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| [926] | 448 | /*! | 
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|  | 449 | \class SOPHYA::IdentityMatrix | 
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|  | 450 | \ingroup TArray | 
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| [2917] | 451 | Class to define an identity matrix. This class is mainly intented for | 
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|  | 452 | initializing TMatrix<T> objects, proportional to the identity matrix. | 
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| [926] | 453 | */ | 
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|  | 454 |  | 
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| [2917] | 455 | //! Constructor representing a square matrix (\b n x \b n) with value \b diag on the diagonal | 
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| [1156] | 456 | IdentityMatrix::IdentityMatrix(double diag, sa_size_t n) | 
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| [804] | 457 | { | 
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|  | 458 | size_ = n; | 
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|  | 459 | diag_ = diag; | 
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|  | 460 | } | 
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