| [1506] | 1 | /* Interface Fits BINARY/ASCII Table     cmv 21/05/2001 */
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| [2902] | 2 | /*    Ajout commandes generique lecture/ecriture FITS   */
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 | 3 | /*                           Reza , Jan 2006            */
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 | 4 | 
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 | 5 | 
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| [2615] | 6 | #include "sopnamsp.h"
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| [1506] | 7 | #include "machdefs.h"
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 | 8 | #include <stdlib.h>
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 | 9 | #include <stdio.h>
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 | 10 | #include <typeinfo>
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| [2322] | 11 | #include <iostream>
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| [1506] | 12 | #include <string.h>
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 | 13 | #include <string>
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 | 14 | 
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 | 15 | #include "nobjmgr.h"
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 | 16 | #include "servnobjm.h"
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 | 17 | #include "nomgadapter.h"
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 | 18 | #include "pistdimgapp.h"
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 | 19 | #include "fbtntintf.h"
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 | 20 | 
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| [3068] | 21 | #include "nomhistadapter.h"
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 | 22 | #include "swfitsdtable.h"
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 | 23 | 
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| [2902] | 24 | #include "fitsmanager.h"
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 | 25 | #include "fitshandler.h"
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 | 26 | #include "fiosinit.h"
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 | 27 | 
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| [1506] | 28 | ////////////////////////////////////////////////////////////
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 | 29 | class NOMAdapter_FitsBT : public NObjMgrAdapter {
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 | 30 | public:
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 | 31 |   NOMAdapter_FitsBT(FitsBTNtuIntf* o = NULL);
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 | 32 |   virtual ~NOMAdapter_FitsBT();
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 | 33 | 
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 | 34 |   virtual NObjMgrAdapter* Clone(AnyDataObj* o);
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 | 35 |   virtual string GetDataObjType();
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 | 36 |   virtual AnyDataObj* CloneDataObj(bool share=false);
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 | 37 |   virtual void SavePPF(POutPersist& s, string const & nom);
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| [2977] | 38 |   virtual void Print(ostream& os, int lev=0);
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| [1506] | 39 |   virtual NTupleInterface* GetNTupleInterface(bool& adel);
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 | 40 | 
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 | 41 | protected:
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 | 42 |   FitsBTNtuIntf* mFBT;
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 | 43 | };
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 | 44 | 
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 | 45 | ////////////////////////////////////////////////////////////
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 | 46 | NOMAdapter_FitsBT::NOMAdapter_FitsBT(FitsBTNtuIntf* o)
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 | 47 |  : NObjMgrAdapter(o)
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 | 48 | {
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 | 49 | mFBT = o;
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 | 50 | }
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 | 51 | 
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 | 52 | NOMAdapter_FitsBT::~NOMAdapter_FitsBT()
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 | 53 | {
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 | 54 | }
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 | 55 | 
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 | 56 | NObjMgrAdapter* NOMAdapter_FitsBT::Clone(AnyDataObj* o)
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 | 57 | {
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 | 58 | FitsBTNtuIntf* g = dynamic_cast<FitsBTNtuIntf *>(o);
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 | 59 | if(g) return ( new NOMAdapter_FitsBT(g) );
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 | 60 | return ( new NObjMgrAdapter(o) );
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 | 61 | }
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 | 62 | 
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 | 63 | string NOMAdapter_FitsBT::GetDataObjType()
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 | 64 | {
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 | 65 | return( "FitsBTNtuIntf " );
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 | 66 | }
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 | 67 | 
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 | 68 | AnyDataObj* NOMAdapter_FitsBT::CloneDataObj(bool /*share*/)
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 | 69 | {
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 | 70 | return( new FitsBTNtuIntf(*mFBT) );
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 | 71 | }
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 | 72 | 
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 | 73 | void NOMAdapter_FitsBT::SavePPF(POutPersist& pos, string const & nom)
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 | 74 | {
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 | 75 | cout<<"NOMAdapter_FitsBT::SavePPF: not implemented"<<endl;
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 | 76 | }
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 | 77 | 
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| [2977] | 78 | void NOMAdapter_FitsBT::Print(ostream& os, int lev)
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| [1506] | 79 | {
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| [2977] | 80 | mFBT->Print(os, lev);
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| [1506] | 81 | }
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 | 82 | 
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 | 83 | NTupleInterface* NOMAdapter_FitsBT::GetNTupleInterface(bool& adel)
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 | 84 | {
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 | 85 | adel = false;
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 | 86 | return(mFBT);
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 | 87 | }
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 | 88 | 
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 | 89 | ////////////////////////////////////////////////////////////
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 | 90 | ////////////////////////////////////////////////////////////
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 | 91 | /////////////////////////////////////////////////////////////
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 | 92 | ///////////////////////////////////////////////////////////
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 | 93 | extern "C" {
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 | 94 | void fitsbtadapter_init();
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 | 95 | void fitsbtadapter_end();
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 | 96 | }
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 | 97 | 
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 | 98 | class fitsbtadapterExecutor : public CmdExecutor {
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 | 99 | public:
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 | 100 |   fitsbtadapterExecutor();
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 | 101 |   virtual ~fitsbtadapterExecutor();
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 | 102 |   virtual int Execute(string& keyw, vector<string>& args, string& toks);
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 | 103 | };
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 | 104 | 
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 | 105 | ///////////////////////////////////////////////////////////
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 | 106 | fitsbtadapterExecutor::fitsbtadapterExecutor()
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 | 107 | {
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| [2902] | 108 | FitsIOServerInit();  // On s'assure de l'initialisation du module FitsIOServer
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 | 109 | 
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| [1506] | 110 | NamedObjMgr omg;
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 | 111 | PIACmd * mpiac = omg.GetImgApp()->CmdInterpreter();
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 | 112 | 
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 | 113 | // On enregistre l'adaptateur
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 | 114 | Services2NObjMgr* serv = omg.GetServiceObj();
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 | 115 | serv->RegisterClass(new FitsBTNtuIntf, new NOMAdapter_FitsBT);
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| [3068] | 116 | // ainsi que pour l'adaptateur de SwFitsDataTable
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 | 117 | serv->RegisterClass(new SwFitsDataTable, new NOMAdapter_DataTable );
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| [1506] | 118 | 
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 | 119 | // On enregistre la commande 
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 | 120 | string hgrp = "FileIO";
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 | 121 | string kw = "fitsadapt";
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 | 122 | string usage = "fitsadapt: NTuple adaptor for Binary and ASCII Fits table\n" ;
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| [2252] | 123 | usage += "Usage: fitsadapt fitsfile [nomobj hdu buflen[,bufsens,lp]]";
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| [1506] | 124 | usage += "\n fitsfile : Fits file name";
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| [2252] | 125 | usage += "\n nomobj : Object name (needed if file name misleading as C++ variable)";
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| [1506] | 126 | usage += "\n hdu : Fits HDU (if <=0 take first binary/ascii table)";
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 | 127 | usage += "\n buflen[,bufsens,lp] : buffer length (sens) for fits reading (default is 100,1,0)";
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| [2902] | 128 | usage += "\n See also  scanfits writefits readfits ";
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| [1506] | 129 | mpiac->RegisterCommand(kw, usage, this, hgrp);
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| [2902] | 130 | 
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 | 131 | kw = "scanfits";
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 | 132 | usage = "scanfits: scan fits files and print information on each HDU\n" ;
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| [3042] | 133 | usage += "Usage: scanfits FileName [slev=0...3]\n";
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 | 134 | usage += "slev=1,3: header keywords , slev=2,3: try to read each HDU\n";
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 | 135 | usage += "See also: readfits writefits fitsadapt ";
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| [2902] | 136 | mpiac->RegisterCommand(kw, usage, this, hgrp); 
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 | 137 | 
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 | 138 | kw = "writefits";
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 | 139 | usage = "writefits: Write objects to a fits file \n" ;
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 | 140 | usage += "Usage: writefits nameobj/pattern FileName \n";
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| [3042] | 141 | usage += "See also: scanfits readfits fitsadapt ";
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| [2902] | 142 | mpiac->RegisterCommand(kw, usage, this, hgrp); 
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 | 143 | 
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 | 144 | kw = "readfits";
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| [3042] | 145 | usage = "readfits: Read one or all HDU's of a fits file \n" ;
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 | 146 | usage += "Usage: readfits FileName [num_hdu] \n";
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 | 147 | usage += " num_hdu=1,..,NbHDU (uses FitsManager) \n";
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| [3068] | 148 | usage += "See also  scanfits writefits fitsadapt swfitstable ";
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| [2902] | 149 | mpiac->RegisterCommand(kw, usage, this, hgrp); 
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| [3068] | 150 | 
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 | 151 | kw = "swfitstable";
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 | 152 | usage = "swfitstable: Creates/read an SwFitsDataTable from a fits file\n" ;
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 | 153 | usage += "   SwFitsDataTable is a table which uses the BINARY-TBL\n";
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 | 154 | usage += "   of the fits file as swap space - useful for large tables\n";
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 | 155 | usage += "Usage: swfitstable FileName [num_hdu=2] [segsize=512]\n";
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 | 156 | usage += "See also: readfits scanfits";
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 | 157 | mpiac->RegisterCommand(kw, usage, this, hgrp); 
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| [1506] | 158 | }
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 | 159 | 
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 | 160 | fitsbtadapterExecutor::~fitsbtadapterExecutor()
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 | 161 | {
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 | 162 | }
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 | 163 | 
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 | 164 | int fitsbtadapterExecutor::Execute(string& kw, vector<string>& tokens, string&)
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 | 165 | {
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 | 166 | NamedObjMgr omg;
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 | 167 | if(kw == "fitsadapt") {
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 | 168 |   if(tokens.size()<1)
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| [2252] | 169 |     {cout<<"Usage: fitsadapt fitsfile [nomobj hdu buflen[,bufsens]]"<<endl;
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| [1506] | 170 |      return(0);}
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 | 171 |     int ihdu=0;
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 | 172 |     int_4 buflen=100, bufsens=1, lp=0;
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 | 173 |     string fname = tokens[0];
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| [2252] | 174 |     string nom_obj ="";
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 | 175 |     if(tokens.size()>1) nom_obj = tokens[1];
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 | 176 |     if(tokens.size()>2) sscanf(tokens[2].c_str(),"%d",&ihdu);
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 | 177 |     if(tokens.size()>3) sscanf(tokens[3].c_str(),"%d,%d,%d",&buflen,&bufsens,&lp);
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| [1506] | 178 |     FitsBTNtuIntf* fbt = new FitsBTNtuIntf(fname,ihdu,buflen,bufsens,lp);
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| [2252] | 179 | 
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 | 180 |     if(nom_obj=="" || nom_obj=="!") nom_obj = omg.GetServiceObj()->FileName2Name(fname);
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 | 181 |     omg.AddObj(fbt,nom_obj);
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| [1506] | 182 |  }
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| [2902] | 183 | else if (kw == "scanfits") {
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 | 184 |   if(tokens.size() < 1)  {
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 | 185 |     cout<<"Usage: scanfits FileName [slev] "<<endl;
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 | 186 |     return 1;
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 | 187 |   }
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 | 188 |   int slev = 0;
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 | 189 |   if(tokens.size() > 1)  slev = atoi(tokens[1].c_str());
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 | 190 |   FitsManager::ScanFile(tokens[0], slev); 
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 | 191 |   return 0;
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 | 192 | }
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| [3068] | 193 | else if (kw == "swfitstable") {
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 | 194 |   if(tokens.size() < 1)  {
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 | 195 |     cout<<"Usage: swfitstable FileName [num_hdu=2] [segsize=512]"<<endl;
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 | 196 |     return 1;
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 | 197 |   }
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 | 198 |   int numhdu = 2;
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 | 199 |   if(tokens.size() > 1)  numhdu = atoi(tokens[1].c_str());
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 | 200 |   int segsize = 512;
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 | 201 |   if(tokens.size() > 2)  segsize = atoi(tokens[2].c_str());
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 | 202 |   SwFitsDataTable* swfd = new SwFitsDataTable(tokens[0], numhdu, segsize);
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 | 203 |   if (swfd != NULL) {
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 | 204 |     string nom = omg.GetServiceObj()->FileName2Name(tokens[0]);
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 | 205 |     omg.AddObj(swfd, nom, false);
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 | 206 |     cout << "swfitstable: SwFitsDataTable object" << nom << " from" 
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 | 207 |          << tokens[0] << " HDU=" << numhdu << endl;
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 | 208 |   }    
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 | 209 |   return 0;
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 | 210 | }
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| [2902] | 211 | else if (kw == "writefits") {
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 | 212 |   if(tokens.size() < 2)  {
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 | 213 |     cout<<"Usage: writefits nameobj/pattern FileName "<<endl;
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 | 214 |     return 1;
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 | 215 |   }
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 | 216 |   vector<string> noms;
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 | 217 |   omg.GetObjList(tokens[0], noms);
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 | 218 |   if (noms.size() < 1) {
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 | 219 |     cout<<"writefits/Error: no object with this name "<<endl;
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 | 220 |     return 2;
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 | 221 |   }
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 | 222 |   cout << "writefits: Opening/Creating fits file " << tokens[1] << endl;
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 | 223 |   FitsInOutFile fos(tokens[1], FitsInOutFile::Fits_Create);
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 | 224 |   for(int kk=0; kk<noms.size(); kk++) {
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 | 225 |     AnyDataObj* co = omg.GetObj(noms[kk]);
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 | 226 |     if (co == NULL) continue;
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 | 227 |     fos.SetNextExtensionName(noms[kk]);
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 | 228 |     try {
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 | 229 |       FitsManager::Write(fos, *co);
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 | 230 |       cout << "writefits: Object " << noms[kk] << " written to HDU No " << fos.CurrentHDU() << endl;  
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 | 231 |     }
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 | 232 |     catch (NotFoundExc & exc) {
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 | 233 |       cout << "writefits/Error writing object " << noms[kk] << " -> " << exc.Msg() << endl;
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 | 234 |     }
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 | 235 |   }
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 | 236 |   return 0;
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 | 237 | }
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 | 238 | else if (kw == "readfits") {
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 | 239 |   if(tokens.size() < 1)  {
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| [3042] | 240 |     cout<<"Usage: readfits FileName [num_hdu]"<<endl;
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| [2902] | 241 |     return 1;
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 | 242 |   }
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| [3042] | 243 |   cout << "readfits: Opening  fits file " << tokens[0];
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| [2902] | 244 |   FitsInOutFile fis(tokens[0], FitsInOutFile::Fits_RO);
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| [3042] | 245 |   int k1 = 1;
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 | 246 |   int k2 = fis.NbHDUs();
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 | 247 |   if (fis.CurrentHDU() > 1) k1 = k2 = fis.CurrentHDU(); 
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 | 248 |   bool fgshdu = false;
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 | 249 |   if (tokens.size() > 1) {  // Numero de HDU specifie
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 | 250 |     k2 = k1 = atoi(tokens[1].c_str());
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 | 251 |     fgshdu = true;
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 | 252 |     cout << " - HDU Num " << k1 << endl;
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 | 253 |   }
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 | 254 |   else cout << " - HDU's " << k1 << "-" << k2 << endl;
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 | 255 | 
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| [2902] | 256 |   string bnom = omg.GetServiceObj()->FileName2Name(tokens[0]);
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 | 257 |   string nom = bnom;
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 | 258 |   char bun[16];
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 | 259 |   int kon = 0;
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| [3042] | 260 |   for(int k=k1; k<=k2; k++) {
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| [2902] | 261 |     try {
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| [3042] | 262 |       if (fgshdu) fis.MoveAbsToHDU(k);
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| [2902] | 263 |       FitsHandlerInterface* fhi = FitsManager::Read(fis);
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 | 264 |       AnyDataObj* obj = fhi->DataObj();
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 | 265 |       if (obj) {
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 | 266 |        kon++;
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 | 267 |        if (kon > 1)  { 
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 | 268 |          sprintf(bun, "%d", kon);
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 | 269 |          nom = bnom + bun;
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 | 270 |        }
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 | 271 |        omg.AddObj(obj, nom, false);
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 | 272 |        cout << "readfits: " << (string)typeid(*obj).name()
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| [3042] | 273 |             << "  read From HDU " << k << " ->" << nom << endl;
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| [2902] | 274 |       }
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 | 275 |       else delete fhi; 
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 | 276 |       //Reza, Jan 2006: Sinon, le fhi ne sera jamais supprime, tant pis 
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 | 277 |       // Il ne prend pas beaucoup de place, une fois que son objet est delete
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 | 278 |     }
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 | 279 |     catch (NotFoundExc & exc) {
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 | 280 |       cout << "readfits/Error - HDU=" << k+1 << " : " << exc.Msg() << endl;
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 | 281 |     }
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| [3042] | 282 |     if (k<k2) fis.MoveToNextHDU();
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| [2902] | 283 |   }
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 | 284 |   return 0;  
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 | 285 | }
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| [1506] | 286 |  return(0);
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 | 287 | }
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 | 288 | 
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 | 289 | ///////////////////////////////////////////////////////////
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 | 290 | static fitsbtadapterExecutor * piafbtex = NULL;
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 | 291 | 
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 | 292 | void fitsbtadapter_init()
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 | 293 | {
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 | 294 | if(piafbtex) delete piafbtex;
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 | 295 | piafbtex = new fitsbtadapterExecutor;
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 | 296 | }
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 | 297 | 
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 | 298 | void fitsbtadapter_end()
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 | 299 | {
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 | 300 | if(piafbtex) delete piafbtex;
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 | 301 | piafbtex = NULL;
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 | 302 | }
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