| 1 | /* Interface Fits BINARY/ASCII Table     cmv 21/05/2001 */
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| 2 | /*    Ajout commandes generique lecture/ecriture FITS   */
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| 3 | /*                           Reza , Jan 2006            */
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| 4 | 
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| 5 | 
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| 6 | #include "sopnamsp.h"
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| 7 | #include "machdefs.h"
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| 8 | #include <stdlib.h>
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| 9 | #include <stdio.h>
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| 10 | #include <typeinfo>
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| 11 | #include <iostream>
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| 12 | #include <string.h>
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| 13 | #include <string>
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| 14 | 
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| 15 | #include "nobjmgr.h"
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| 16 | #include "servnobjm.h"
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| 17 | #include "nomgadapter.h"
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| 18 | #include "pistdimgapp.h"
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| 19 | #include "fbtntintf.h"
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| 20 | 
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| 21 | #include "nomhistadapter.h"
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| 22 | #include "swfitsdtable.h"
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| 23 | 
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| 24 | #include "fitsmanager.h"
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| 25 | #include "fitshandler.h"
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| 26 | #include "fiosinit.h"
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| 27 | 
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| 28 | ////////////////////////////////////////////////////////////
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| 29 | class NOMAdapter_FitsBT : public NObjMgrAdapter {
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| 30 | public:
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| 31 |   NOMAdapter_FitsBT(FitsBTNtuIntf* o = NULL);
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| 32 |   virtual ~NOMAdapter_FitsBT();
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| 33 | 
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| 34 |   virtual NObjMgrAdapter* Clone(AnyDataObj* o);
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| 35 |   virtual string GetDataObjType();
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| 36 |   virtual AnyDataObj* CloneDataObj(bool share=false);
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| 37 |   virtual void SavePPF(POutPersist& s, string const & nom);
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| 38 |   virtual void Print(ostream& os, int lev=0);
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| 39 |   virtual NTupleInterface* GetNTupleInterface(bool& adel);
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| 40 | 
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| 41 | protected:
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| 42 |   FitsBTNtuIntf* mFBT;
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| 43 | };
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| 44 | 
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| 45 | ////////////////////////////////////////////////////////////
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| 46 | NOMAdapter_FitsBT::NOMAdapter_FitsBT(FitsBTNtuIntf* o)
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| 47 |  : NObjMgrAdapter(o)
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| 48 | {
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| 49 | mFBT = o;
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| 50 | }
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| 51 | 
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| 52 | NOMAdapter_FitsBT::~NOMAdapter_FitsBT()
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| 53 | {
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| 54 | }
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| 55 | 
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| 56 | NObjMgrAdapter* NOMAdapter_FitsBT::Clone(AnyDataObj* o)
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| 57 | {
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| 58 | FitsBTNtuIntf* g = dynamic_cast<FitsBTNtuIntf *>(o);
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| 59 | if(g) return ( new NOMAdapter_FitsBT(g) );
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| 60 | return ( new NObjMgrAdapter(o) );
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| 61 | }
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| 62 | 
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| 63 | string NOMAdapter_FitsBT::GetDataObjType()
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| 64 | {
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| 65 | return( "FitsBTNtuIntf " );
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| 66 | }
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| 67 | 
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| 68 | AnyDataObj* NOMAdapter_FitsBT::CloneDataObj(bool /*share*/)
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| 69 | {
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| 70 | return( new FitsBTNtuIntf(*mFBT) );
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| 71 | }
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| 72 | 
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| 73 | void NOMAdapter_FitsBT::SavePPF(POutPersist& pos, string const & nom)
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| 74 | {
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| 75 | cout<<"NOMAdapter_FitsBT::SavePPF: not implemented"<<endl;
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| 76 | }
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| 77 | 
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| 78 | void NOMAdapter_FitsBT::Print(ostream& os, int lev)
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| 79 | {
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| 80 | mFBT->Print(os, lev);
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| 81 | }
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| 82 | 
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| 83 | NTupleInterface* NOMAdapter_FitsBT::GetNTupleInterface(bool& adel)
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| 84 | {
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| 85 | adel = false;
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| 86 | return(mFBT);
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| 87 | }
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| 88 | 
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| 89 | ////////////////////////////////////////////////////////////
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| 90 | ////////////////////////////////////////////////////////////
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| 91 | /////////////////////////////////////////////////////////////
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| 92 | ///////////////////////////////////////////////////////////
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| 93 | extern "C" {
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| 94 | void fitsbtadapter_init();
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| 95 | void fitsbtadapter_end();
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| 96 | }
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| 97 | 
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| 98 | class fitsbtadapterExecutor : public CmdExecutor {
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| 99 | public:
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| 100 |   fitsbtadapterExecutor();
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| 101 |   virtual ~fitsbtadapterExecutor();
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| 102 |   virtual int Execute(string& keyw, vector<string>& args, string& toks);
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| 103 | };
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| 104 | 
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| 105 | ///////////////////////////////////////////////////////////
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| 106 | fitsbtadapterExecutor::fitsbtadapterExecutor()
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| 107 | {
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| 108 | FitsIOServerInit();  // On s'assure de l'initialisation du module FitsIOServer
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| 109 | 
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| 110 | NamedObjMgr omg;
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| 111 | PIACmd * mpiac = omg.GetImgApp()->CmdInterpreter();
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| 112 | 
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| 113 | // On enregistre l'adaptateur
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| 114 | Services2NObjMgr* serv = omg.GetServiceObj();
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| 115 | serv->RegisterClass(new FitsBTNtuIntf, new NOMAdapter_FitsBT);
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| 116 | // ainsi que pour l'adaptateur de SwFitsDataTable
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| 117 | serv->RegisterClass(new SwFitsDataTable, new NOMAdapter_DataTable );
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| 118 | 
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| 119 | // On enregistre la commande 
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| 120 | string hgrp = "FileIO";
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| 121 | string kw = "fitsadapt";
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| 122 | string usage = "fitsadapt: NTuple adaptor for Binary and ASCII Fits table\n" ;
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| 123 | usage += "Usage: fitsadapt fitsfile [nomobj hdu buflen[,bufsens,lp]]";
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| 124 | usage += "\n fitsfile : Fits file name";
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| 125 | usage += "\n nomobj : Object name (needed if file name misleading as C++ variable)";
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| 126 | usage += "\n hdu : Fits HDU (if <=0 take first binary/ascii table)";
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| 127 | usage += "\n buflen[,bufsens,lp] : buffer length (sens) for fits reading (default is 100,1,0)";
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| 128 | usage += "\n See also  scanfits writefits readfits ";
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| 129 | mpiac->RegisterCommand(kw, usage, this, hgrp);
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| 130 | 
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| 131 | kw = "scanfits";
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| 132 | usage = "scanfits: scan fits files and print information on each HDU\n" ;
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| 133 | usage += "Usage: scanfits FileName [slev=0...3]\n";
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| 134 | usage += "slev=1,3: header keywords , slev=2,3: try to read each HDU\n";
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| 135 | usage += "See also: readfits writefits fitsadapt ";
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| 136 | mpiac->RegisterCommand(kw, usage, this, hgrp); 
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| 137 | 
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| 138 | kw = "writefits";
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| 139 | usage = "writefits: Write objects to a fits file \n" ;
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| 140 | usage += "Usage: writefits nameobj/pattern FileName \n";
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| 141 | usage += "See also: scanfits readfits fitsadapt ";
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| 142 | mpiac->RegisterCommand(kw, usage, this, hgrp); 
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| 143 | 
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| 144 | kw = "readfits";
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| 145 | usage = "readfits: Read one or all HDU's of a fits file \n" ;
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| 146 | usage += "Usage: readfits FileName [num_hdu] \n";
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| 147 | usage += " num_hdu=1,..,NbHDU (uses FitsManager) \n";
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| 148 | usage += "See also  scanfits writefits fitsadapt swfitstable ";
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| 149 | mpiac->RegisterCommand(kw, usage, this, hgrp); 
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| 150 | 
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| 151 | kw = "swfitstable";
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| 152 | usage = "swfitstable: Creates/read an SwFitsDataTable from a fits file\n" ;
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| 153 | usage += "   SwFitsDataTable is a table which uses the BINARY-TBL\n";
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| 154 | usage += "   of the fits file as swap space - useful for large tables\n";
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| 155 | usage += "Usage: swfitstable FileName [num_hdu=2] [segsize=512]\n";
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| 156 | usage += "See also: readfits scanfits";
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| 157 | mpiac->RegisterCommand(kw, usage, this, hgrp); 
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| 158 | }
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| 159 | 
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| 160 | fitsbtadapterExecutor::~fitsbtadapterExecutor()
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| 161 | {
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| 162 | }
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| 163 | 
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| 164 | int fitsbtadapterExecutor::Execute(string& kw, vector<string>& tokens, string&)
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| 165 | {
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| 166 | NamedObjMgr omg;
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| 167 | if(kw == "fitsadapt") {
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| 168 |   if(tokens.size()<1)
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| 169 |     {cout<<"Usage: fitsadapt fitsfile [nomobj hdu buflen[,bufsens]]"<<endl;
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| 170 |      return(0);}
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| 171 |     int ihdu=0;
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| 172 |     int_4 buflen=100, bufsens=1, lp=0;
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| 173 |     string fname = tokens[0];
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| 174 |     string nom_obj ="";
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| 175 |     if(tokens.size()>1) nom_obj = tokens[1];
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| 176 |     if(tokens.size()>2) sscanf(tokens[2].c_str(),"%d",&ihdu);
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| 177 |     if(tokens.size()>3) sscanf(tokens[3].c_str(),"%d,%d,%d",&buflen,&bufsens,&lp);
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| 178 |     FitsBTNtuIntf* fbt = new FitsBTNtuIntf(fname,ihdu,buflen,bufsens,lp);
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| 179 | 
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| 180 |     if(nom_obj=="" || nom_obj=="!") nom_obj = omg.GetServiceObj()->FileName2Name(fname);
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| 181 |     omg.AddObj(fbt,nom_obj);
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| 182 |  }
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| 183 | else if (kw == "scanfits") {
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| 184 |   if(tokens.size() < 1)  {
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| 185 |     cout<<"Usage: scanfits FileName [slev] "<<endl;
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| 186 |     return 1;
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| 187 |   }
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| 188 |   int slev = 0;
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| 189 |   if(tokens.size() > 1)  slev = atoi(tokens[1].c_str());
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| 190 |   FitsManager::ScanFile(tokens[0], slev); 
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| 191 |   return 0;
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| 192 | }
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| 193 | else if (kw == "swfitstable") {
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| 194 |   if(tokens.size() < 1)  {
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| 195 |     cout<<"Usage: swfitstable FileName [num_hdu=2] [segsize=512]"<<endl;
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| 196 |     return 1;
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| 197 |   }
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| 198 |   int numhdu = 2;
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| 199 |   if(tokens.size() > 1)  numhdu = atoi(tokens[1].c_str());
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| 200 |   int segsize = 512;
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| 201 |   if(tokens.size() > 2)  segsize = atoi(tokens[2].c_str());
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| 202 |   SwFitsDataTable* swfd = new SwFitsDataTable(tokens[0], numhdu, segsize);
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| 203 |   if (swfd != NULL) {
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| 204 |     string nom = omg.GetServiceObj()->FileName2Name(tokens[0]);
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| 205 |     omg.AddObj(swfd, nom, false);
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| 206 |     cout << "swfitstable: SwFitsDataTable object" << nom << " from" 
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| 207 |          << tokens[0] << " HDU=" << numhdu << endl;
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| 208 |   }    
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| 209 |   return 0;
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| 210 | }
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| 211 | else if (kw == "writefits") {
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| 212 |   if(tokens.size() < 2)  {
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| 213 |     cout<<"Usage: writefits nameobj/pattern FileName "<<endl;
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| 214 |     return 1;
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| 215 |   }
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| 216 |   vector<string> noms;
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| 217 |   omg.GetObjList(tokens[0], noms);
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| 218 |   if (noms.size() < 1) {
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| 219 |     cout<<"writefits/Error: no object with this name "<<endl;
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| 220 |     return 2;
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| 221 |   }
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| 222 |   cout << "writefits: Opening/Creating fits file " << tokens[1] << endl;
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| 223 |   FitsInOutFile fos(tokens[1], FitsInOutFile::Fits_Create);
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| 224 |   for(int kk=0; kk<noms.size(); kk++) {
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| 225 |     AnyDataObj* co = omg.GetObj(noms[kk]);
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| 226 |     if (co == NULL) continue;
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| 227 |     fos.SetNextExtensionName(noms[kk]);
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| 228 |     try {
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| 229 |       FitsManager::Write(fos, *co);
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| 230 |       cout << "writefits: Object " << noms[kk] << " written to HDU No " << fos.CurrentHDU() << endl;  
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| 231 |     }
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| 232 |     catch (NotFoundExc & exc) {
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| 233 |       cout << "writefits/Error writing object " << noms[kk] << " -> " << exc.Msg() << endl;
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| 234 |     }
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| 235 |   }
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| 236 |   return 0;
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| 237 | }
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| 238 | else if (kw == "readfits") {
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| 239 |   if(tokens.size() < 1)  {
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| 240 |     cout<<"Usage: readfits FileName [num_hdu]"<<endl;
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| 241 |     return 1;
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| 242 |   }
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| 243 |   cout << "readfits: Opening  fits file " << tokens[0];
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| 244 |   FitsInOutFile fis(tokens[0], FitsInOutFile::Fits_RO);
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| 245 |   int k1 = 1;
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| 246 |   int k2 = fis.NbHDUs();
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| 247 |   if (fis.CurrentHDU() > 1) k1 = k2 = fis.CurrentHDU(); 
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| 248 |   bool fgshdu = false;
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| 249 |   if (tokens.size() > 1) {  // Numero de HDU specifie
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| 250 |     k2 = k1 = atoi(tokens[1].c_str());
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| 251 |     fgshdu = true;
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| 252 |     cout << " - HDU Num " << k1 << endl;
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| 253 |   }
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| 254 |   else cout << " - HDU's " << k1 << "-" << k2 << endl;
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| 255 | 
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| 256 |   string bnom = omg.GetServiceObj()->FileName2Name(tokens[0]);
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| 257 |   string nom = bnom;
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| 258 |   char bun[16];
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| 259 |   int kon = 0;
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| 260 |   for(int k=k1; k<=k2; k++) {
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| 261 |     try {
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| 262 |       if (fgshdu) fis.MoveAbsToHDU(k);
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| 263 |       FitsHandlerInterface* fhi = FitsManager::Read(fis);
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| 264 |       AnyDataObj* obj = fhi->DataObj();
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| 265 |       if (obj) {
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| 266 |        kon++;
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| 267 |        if (kon > 1)  { 
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| 268 |          sprintf(bun, "%d", kon);
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| 269 |          nom = bnom + bun;
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| 270 |        }
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| 271 |        omg.AddObj(obj, nom, false);
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| 272 |        cout << "readfits: " << (string)typeid(*obj).name()
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| 273 |             << "  read From HDU " << k << " ->" << nom << endl;
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| 274 |       }
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| 275 |       else delete fhi; 
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| 276 |       //Reza, Jan 2006: Sinon, le fhi ne sera jamais supprime, tant pis 
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| 277 |       // Il ne prend pas beaucoup de place, une fois que son objet est delete
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| 278 |     }
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| 279 |     catch (NotFoundExc & exc) {
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| 280 |       cout << "readfits/Error - HDU=" << k+1 << " : " << exc.Msg() << endl;
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| 281 |     }
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| 282 |     if (k<k2) fis.MoveToNextHDU();
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| 283 |   }
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| 284 |   return 0;  
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| 285 | }
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| 286 |  return(0);
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| 287 | }
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| 288 | 
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| 289 | ///////////////////////////////////////////////////////////
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| 290 | static fitsbtadapterExecutor * piafbtex = NULL;
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| 291 | 
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| 292 | void fitsbtadapter_init()
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| 293 | {
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| 294 | if(piafbtex) delete piafbtex;
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| 295 | piafbtex = new fitsbtadapterExecutor;
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| 296 | }
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| 297 | 
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| 298 | void fitsbtadapter_end()
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| 299 | {
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| 300 | if(piafbtex) delete piafbtex;
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| 301 | piafbtex = NULL;
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| 302 | }
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