1 | /* Interface Fits BINARY/ASCII Table cmv 21/05/2001 */
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2 | /* Ajout commandes generique lecture/ecriture FITS */
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3 | /* Reza , Jan 2006 */
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4 |
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5 |
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6 | #include "sopnamsp.h"
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7 | #include "machdefs.h"
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8 | #include <stdlib.h>
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9 | #include <stdio.h>
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10 | #include <typeinfo>
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11 | #include <iostream>
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12 | #include <string.h>
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13 | #include <string>
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14 |
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15 | #include "nobjmgr.h"
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16 | #include "servnobjm.h"
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17 | #include "nomgadapter.h"
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18 | #include "pistdimgapp.h"
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19 | #include "fbtntintf.h"
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20 |
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21 | #include "nomhistadapter.h"
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22 | #include "swfitsdtable.h"
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23 |
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24 | #include "fitsmanager.h"
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25 | #include "fitshandler.h"
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26 | #include "fiosinit.h"
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27 |
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28 | ////////////////////////////////////////////////////////////
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29 | class NOMAdapter_FitsBT : public NObjMgrAdapter {
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30 | public:
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31 | NOMAdapter_FitsBT(FitsBTNtuIntf* o = NULL);
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32 | virtual ~NOMAdapter_FitsBT();
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33 |
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34 | virtual NObjMgrAdapter* Clone(AnyDataObj* o);
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35 | virtual string GetDataObjType();
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36 | virtual AnyDataObj* CloneDataObj(bool share=false);
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37 | virtual void SavePPF(POutPersist& s, string const & nom);
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38 | virtual void Print(ostream& os, int lev=0);
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39 | virtual NTupleInterface* GetNTupleInterface(bool& adel);
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40 |
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41 | protected:
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42 | FitsBTNtuIntf* mFBT;
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43 | };
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44 |
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45 | ////////////////////////////////////////////////////////////
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46 | NOMAdapter_FitsBT::NOMAdapter_FitsBT(FitsBTNtuIntf* o)
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47 | : NObjMgrAdapter(o)
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48 | {
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49 | mFBT = o;
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50 | }
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51 |
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52 | NOMAdapter_FitsBT::~NOMAdapter_FitsBT()
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53 | {
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54 | }
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55 |
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56 | NObjMgrAdapter* NOMAdapter_FitsBT::Clone(AnyDataObj* o)
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57 | {
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58 | FitsBTNtuIntf* g = dynamic_cast<FitsBTNtuIntf *>(o);
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59 | if(g) return ( new NOMAdapter_FitsBT(g) );
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60 | return ( new NObjMgrAdapter(o) );
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61 | }
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62 |
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63 | string NOMAdapter_FitsBT::GetDataObjType()
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64 | {
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65 | return( "FitsBTNtuIntf " );
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66 | }
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67 |
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68 | AnyDataObj* NOMAdapter_FitsBT::CloneDataObj(bool /*share*/)
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69 | {
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70 | return( new FitsBTNtuIntf(*mFBT) );
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71 | }
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72 |
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73 | void NOMAdapter_FitsBT::SavePPF(POutPersist& pos, string const & nom)
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74 | {
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75 | cout<<"NOMAdapter_FitsBT::SavePPF: not implemented"<<endl;
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76 | }
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77 |
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78 | void NOMAdapter_FitsBT::Print(ostream& os, int lev)
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79 | {
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80 | mFBT->Print(os, lev);
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81 | }
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82 |
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83 | NTupleInterface* NOMAdapter_FitsBT::GetNTupleInterface(bool& adel)
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84 | {
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85 | adel = false;
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86 | return(mFBT);
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87 | }
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88 |
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89 | ////////////////////////////////////////////////////////////
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90 | ////////////////////////////////////////////////////////////
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91 | /////////////////////////////////////////////////////////////
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92 | ///////////////////////////////////////////////////////////
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93 | extern "C" {
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94 | void fitsbtadapter_init();
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95 | void fitsbtadapter_end();
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96 | }
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97 |
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98 | class fitsbtadapterExecutor : public CmdExecutor {
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99 | public:
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100 | fitsbtadapterExecutor();
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101 | virtual ~fitsbtadapterExecutor();
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102 | virtual int Execute(string& keyw, vector<string>& args, string& toks);
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103 | };
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104 |
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105 | ///////////////////////////////////////////////////////////
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106 | fitsbtadapterExecutor::fitsbtadapterExecutor()
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107 | {
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108 | FitsIOServerInit(); // On s'assure de l'initialisation du module FitsIOServer
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109 |
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110 | NamedObjMgr omg;
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111 | PIACmd * mpiac = omg.GetImgApp()->CmdInterpreter();
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112 |
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113 | // On enregistre l'adaptateur
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114 | Services2NObjMgr* serv = omg.GetServiceObj();
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115 | serv->RegisterClass(new FitsBTNtuIntf, new NOMAdapter_FitsBT);
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116 | // ainsi que pour l'adaptateur de SwFitsDataTable
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117 | serv->RegisterClass(new SwFitsDataTable, new NOMAdapter_DataTable );
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118 |
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119 | // On enregistre la commande
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120 | string hgrp = "FileIO";
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121 | string kw = "fitsadapt";
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122 | string usage = "fitsadapt: NTuple adaptor for Binary and ASCII Fits table\n" ;
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123 | usage += "Usage: fitsadapt fitsfile [nomobj hdu buflen[,bufsens,lp]]";
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124 | usage += "\n fitsfile : Fits file name";
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125 | usage += "\n nomobj : Object name (needed if file name misleading as C++ variable)";
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126 | usage += "\n hdu : Fits HDU (if <=0 take first binary/ascii table)";
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127 | usage += "\n buflen[,bufsens,lp] : buffer length (sens) for fits reading (default is 100,1,0)";
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128 | usage += "\n See also scanfits writefits readfits ";
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129 | mpiac->RegisterCommand(kw, usage, this, hgrp);
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130 |
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131 | kw = "scanfits";
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132 | usage = "scanfits: scan fits files and print information on each HDU\n" ;
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133 | usage += "Usage: scanfits FileName [slev=0...3]\n";
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134 | usage += "slev=1,3: header keywords , slev=2,3: try to read each HDU\n";
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135 | usage += "See also: readfits writefits fitsadapt ";
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136 | mpiac->RegisterCommand(kw, usage, this, hgrp);
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137 |
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138 | kw = "writefits";
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139 | usage = "writefits: Write objects to a fits file \n" ;
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140 | usage += "Usage: writefits nameobj/pattern FileName \n";
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141 | usage += "See also: scanfits readfits fitsadapt ";
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142 | mpiac->RegisterCommand(kw, usage, this, hgrp);
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143 |
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144 | kw = "readfits";
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145 | usage = "readfits: Read one or all HDU's of a fits file \n" ;
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146 | usage += "Usage: readfits FileName [num_hdu] \n";
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147 | usage += " num_hdu=1,..,NbHDU (uses FitsManager) \n";
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148 | usage += "See also scanfits writefits fitsadapt swfitstable ";
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149 | mpiac->RegisterCommand(kw, usage, this, hgrp);
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150 |
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151 | kw = "swfitstable";
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152 | usage = "swfitstable: Creates/read an SwFitsDataTable from a fits file\n" ;
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153 | usage += " SwFitsDataTable is a table which uses the BINARY-TBL\n";
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154 | usage += " of the fits file as swap space - useful for large tables\n";
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155 | usage += "Usage: swfitstable FileName [num_hdu=2] [segsize=512]\n";
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156 | usage += "See also: readfits scanfits";
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157 | mpiac->RegisterCommand(kw, usage, this, hgrp);
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158 | }
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159 |
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160 | fitsbtadapterExecutor::~fitsbtadapterExecutor()
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161 | {
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162 | }
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163 |
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164 | int fitsbtadapterExecutor::Execute(string& kw, vector<string>& tokens, string&)
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165 | {
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166 | NamedObjMgr omg;
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167 | if(kw == "fitsadapt") {
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168 | if(tokens.size()<1)
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169 | {cout<<"Usage: fitsadapt fitsfile [nomobj hdu buflen[,bufsens]]"<<endl;
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170 | return(0);}
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171 | int ihdu=0;
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172 | int_4 buflen=100, bufsens=1, lp=0;
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173 | string fname = tokens[0];
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174 | string nom_obj ="";
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175 | if(tokens.size()>1) nom_obj = tokens[1];
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176 | if(tokens.size()>2) sscanf(tokens[2].c_str(),"%d",&ihdu);
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177 | if(tokens.size()>3) sscanf(tokens[3].c_str(),"%d,%d,%d",&buflen,&bufsens,&lp);
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178 | FitsBTNtuIntf* fbt = new FitsBTNtuIntf(fname,ihdu,buflen,bufsens,lp);
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179 |
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180 | if(nom_obj=="" || nom_obj=="!") nom_obj = omg.GetServiceObj()->FileName2Name(fname);
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181 | omg.AddObj(fbt,nom_obj);
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182 | }
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183 | else if (kw == "scanfits") {
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184 | if(tokens.size() < 1) {
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185 | cout<<"Usage: scanfits FileName [slev] "<<endl;
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186 | return 1;
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187 | }
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188 | int slev = 0;
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189 | if(tokens.size() > 1) slev = atoi(tokens[1].c_str());
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190 | FitsManager::ScanFile(tokens[0], slev);
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191 | return 0;
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192 | }
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193 | else if (kw == "swfitstable") {
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194 | if(tokens.size() < 1) {
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195 | cout<<"Usage: swfitstable FileName [num_hdu=2] [segsize=512]"<<endl;
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196 | return 1;
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197 | }
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198 | int numhdu = 2;
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199 | if(tokens.size() > 1) numhdu = atoi(tokens[1].c_str());
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200 | int segsize = 512;
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201 | if(tokens.size() > 2) segsize = atoi(tokens[2].c_str());
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202 | SwFitsDataTable* swfd = new SwFitsDataTable(tokens[0], numhdu, segsize);
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203 | if (swfd != NULL) {
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204 | string nom = omg.GetServiceObj()->FileName2Name(tokens[0]);
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205 | omg.AddObj(swfd, nom, false);
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206 | cout << "swfitstable: SwFitsDataTable object" << nom << " from"
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207 | << tokens[0] << " HDU=" << numhdu << endl;
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208 | }
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209 | return 0;
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210 | }
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211 | else if (kw == "writefits") {
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212 | if(tokens.size() < 2) {
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213 | cout<<"Usage: writefits nameobj/pattern FileName "<<endl;
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214 | return 1;
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215 | }
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216 | vector<string> noms;
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217 | omg.GetObjList(tokens[0], noms);
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218 | if (noms.size() < 1) {
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219 | cout<<"writefits/Error: no object with this name "<<endl;
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220 | return 2;
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221 | }
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222 | cout << "writefits: Opening/Creating fits file " << tokens[1] << endl;
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223 | FitsInOutFile fos(tokens[1], FitsInOutFile::Fits_Create);
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224 | for(int kk=0; kk<noms.size(); kk++) {
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225 | AnyDataObj* co = omg.GetObj(noms[kk]);
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226 | if (co == NULL) continue;
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227 | fos.SetNextExtensionName(noms[kk]);
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228 | try {
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229 | FitsManager::Write(fos, *co);
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230 | cout << "writefits: Object " << noms[kk] << " written to HDU No " << fos.CurrentHDU() << endl;
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231 | }
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232 | catch (NotFoundExc & exc) {
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233 | cout << "writefits/Error writing object " << noms[kk] << " -> " << exc.Msg() << endl;
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234 | }
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235 | }
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236 | return 0;
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237 | }
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238 | else if (kw == "readfits") {
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239 | if(tokens.size() < 1) {
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240 | cout<<"Usage: readfits FileName [num_hdu]"<<endl;
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241 | return 1;
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242 | }
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243 | cout << "readfits: Opening fits file " << tokens[0];
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244 | FitsInOutFile fis(tokens[0], FitsInOutFile::Fits_RO);
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245 | int k1 = 1;
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246 | int k2 = fis.NbHDUs();
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247 | if (fis.CurrentHDU() > 1) k1 = k2 = fis.CurrentHDU();
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248 | bool fgshdu = false;
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249 | if (tokens.size() > 1) { // Numero de HDU specifie
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250 | k2 = k1 = atoi(tokens[1].c_str());
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251 | fgshdu = true;
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252 | cout << " - HDU Num " << k1 << endl;
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253 | }
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254 | else cout << " - HDU's " << k1 << "-" << k2 << endl;
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255 |
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256 | string bnom = omg.GetServiceObj()->FileName2Name(tokens[0]);
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257 | string nom = bnom;
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258 | char bun[16];
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259 | int kon = 0;
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260 | for(int k=k1; k<=k2; k++) {
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261 | try {
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262 | if (fgshdu) fis.MoveAbsToHDU(k);
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263 | FitsHandlerInterface* fhi = FitsManager::Read(fis);
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264 | AnyDataObj* obj = fhi->DataObj();
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265 | if (obj) {
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266 | kon++;
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267 | if (kon > 1) {
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268 | sprintf(bun, "%d", kon);
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269 | nom = bnom + bun;
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270 | }
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271 | omg.AddObj(obj, nom, false);
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272 | cout << "readfits: " << (string)typeid(*obj).name()
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273 | << " read From HDU " << k << " ->" << nom << endl;
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274 | }
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275 | else delete fhi;
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276 | //Reza, Jan 2006: Sinon, le fhi ne sera jamais supprime, tant pis
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277 | // Il ne prend pas beaucoup de place, une fois que son objet est delete
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278 | }
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279 | catch (NotFoundExc & exc) {
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280 | cout << "readfits/Error - HDU=" << k+1 << " : " << exc.Msg() << endl;
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281 | }
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282 | if (k<k2) fis.MoveToNextHDU();
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283 | }
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284 | return 0;
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285 | }
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286 | return(0);
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287 | }
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288 |
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289 | ///////////////////////////////////////////////////////////
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290 | static fitsbtadapterExecutor * piafbtex = NULL;
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291 |
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292 | void fitsbtadapter_init()
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293 | {
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294 | if(piafbtex) delete piafbtex;
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295 | piafbtex = new fitsbtadapterExecutor;
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296 | }
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297 |
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298 | void fitsbtadapter_end()
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299 | {
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300 | if(piafbtex) delete piafbtex;
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301 | piafbtex = NULL;
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302 | }
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