| 1 | #include "pmixer.h"
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| 2 | 
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| 3 | /*!
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| 4 |  * \defgroup PMixer PMixer module
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| 5 |  * This module contains programs which:
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| 6 |  * <UL>
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| 7 |  * <LI> add several sky components, taking into account their
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| 8 |  * radiation spectra and convoluting them with a given filter
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| 9 |  * response : skymixer
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| 10 |  * <LI> create a map with point source : extractRS
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| 11 |  * <LI> generate sky components, radiation spectra and spectral 
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| 12 |  * response (small generator of maps) : tgsky and tgrsr
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| 13 |  * </UL> 
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| 14 |  * A detailed description may be found at:
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| 15 |  */
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| 16 | /*!
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| 17 |  * \ingroup PMixer
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| 18 |  * \file skymixer.cc
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| 19 |  *\brief   \b PROGRAM    \b skyMixer  <BR>
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| 20 |  *   add several sky components, taking into account their
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| 21 |  *radiation spectra and convoluting them with a given filter
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| 22 |  *response
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| 23 |  */
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| 24 | 
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| 25 | // -----------------------------------------------------------------
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| 26 | // ------------- Function declaration ------------------------------
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| 27 | int CheckCards(DataCards & dc, string & msg);
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| 28 | char * BuildFITSFileName(string const & fname);
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| 29 | SpectralResponse * getSpectralResponse(DataCards & dc);
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| 30 | RadSpectra * getEmissionSpectra(DataCards & dc, int nc);
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| 31 | void SKM_MergeFITSKeywords(char * flnm);
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| 32 | void RadSpec2Nt(RadSpectra & rs, POutPersist & so, string name);
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| 33 | void SpectralResponse2Nt(SpectralResponse& sr, POutPersist & so, string name);
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| 34 |  
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| 35 | // to add different sky components and corresponding tools
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| 36 | //----------------------------------------------------------
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| 37 | template <class T> 
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| 38 | void addComponent(SpectralResponse&  sr, 
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| 39 |                                      PixelMap<T>& finalMap, 
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| 40 |                                      PixelMap<T>& mapToAdd, 
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| 41 |                                      RadSpectra& rs, double K=1.);
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| 42 | //
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| 43 | template <class T>
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| 44 | void addComponentBeta(SphereHEALPix<T>& finalMap, 
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| 45 |                       SphereHEALPix<T>& mapToAdd,SpectralResponse& sr, 
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| 46 |                       SphereHEALPix<T>& betaMap, double normFreq, double K);
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| 47 | //
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| 48 | template <class T>
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| 49 | void integratedMap(SpectralResponse&  sr,   
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| 50 |                    SphereHEALPix<T>& betaMap, double normFreq, SphereHEALPix<T>& intBetaMap);
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| 51 | 
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| 52 | //
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| 53 | template <class T>
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| 54 | void addComponentBeta(SphereHEALPix<T>& finalMap, 
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| 55 |                       SphereHEALPix<T>& mapToAdd,
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| 56 |                       SphereHEALPix<T>& intBetaMap, double K);
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| 57 | //
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| 58 | template <class T> 
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| 59 | void addDipole(SpectralResponse&  sr,  PixelMap<T>& finalMap, 
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| 60 |                double theta,double phi,double amp,double temp);
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| 61 | //
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| 62 | // -----------------------------------------------------------------
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| 63 | 
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| 64 | //  ----- Global (static) variables ------------
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| 65 | static bool rdmap = false;    // true -> Read map first 
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| 66 | static char mapPath[256];     // Path for input maps
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| 67 | static int  hp_nside = 32;    // HealPix NSide
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| 68 | static int  nskycomp = 0;     // Number of sky components
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| 69 | static int  debuglev = 0;     // Debug Level
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| 70 | static int  printlev = 0;     // Print Level
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| 71 | static POutPersist * so = NULL;    // Debug PPFOut file
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| 72 | static DVList * dvl_fitskw = NULL; // Global DVList for all FITS Keywords 
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| 73 | 
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| 74 | // --------- SkyMixer Version --------------
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| 75 | static double skm_version = 1.4;
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| 76 | 
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| 77 | // -------------------------------------------------------------------------
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| 78 | //                             main program 
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| 79 | // -------------------------------------------------------------------------
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| 80 | int main(int narg, char * arg[])
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| 81 | {
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| 82 |   if ((narg < 3) || ((narg > 1) && (strcmp(arg[1], "-h") == 0) )) {
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| 83 |     cout << "  Usage: skymixer parameterFile outputfitsname [outppfname]" << endl;
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| 84 |     exit(0);
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| 85 |   }
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| 86 |   
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| 87 |   InitTim();
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| 88 |   
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| 89 |   string msg;
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| 90 |   int rc = 0;
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| 91 |   RadSpectra * es = NULL;
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| 92 |   SpectralResponse * sr = NULL;
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| 93 |   double moy, sig;
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| 94 |   
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| 95 |   DataCards dc;
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| 96 |   so = NULL;
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| 97 |   // DVList for merging all FITS keywords 
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| 98 |   dvl_fitskw = new DVList;
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| 99 |   
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| 100 |   try {
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| 101 |     string dcard = arg[1];
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| 102 |     if(printlev > 1) cout << " Decoding parameters from file " << dcard << endl;
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| 103 |     dc.ReadFile(dcard);
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| 104 |     
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| 105 |     rc = CheckCards(dc, msg);
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| 106 |     if (rc) { 
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| 107 |       cerr << " Error condition -> Rc= " << rc << endl;
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| 108 |       cerr << " Msg= " << msg << endl;
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| 109 |       return(rc);
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| 110 |     }
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| 111 |   }
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| 112 |   catch (PException exc) {
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| 113 |     msg = exc.Msg();
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| 114 |     cerr << " !!!! skymixer/ Readcard - Catched exception - Msg= " << exc.Msg() << endl;
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| 115 |     return(90);
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| 116 |   }   
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| 117 |   
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| 118 |   
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| 119 |   cout << " skymix/Info : NComp = " <<  nskycomp << " SphereHEALPix_NSide= " << hp_nside << endl;
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| 120 |   cout << "  ... MapPath = " << (string)mapPath << "  DebugLev= " << debuglev 
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| 121 |        << "  PrintLev= " << printlev << endl;
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| 122 |   
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| 123 |   // We create an output persist file for writing debug objects
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| 124 |   if (debuglev > 0) so = new POutPersist("skymixdbg.ppf");
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| 125 |   
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| 126 |   SphereHEALPix<float> outgs(hp_nside);
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| 127 |   try{
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| 128 |     if (rdmap) {  // Reading map from FITS file
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| 129 |       char ifnm[256];
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| 130 |       strncpy(ifnm, dc.SParam("READMAP", 0).c_str(), 255);
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| 131 |       ifnm[255] = '\0';
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| 132 |       cout << " Reading output HealPix map from FITS file " << (string)ifnm << endl;
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| 133 |       {
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| 134 |         FITS_SphereHEALPix<float> fios(&outgs);
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| 135 |         fios.Read(ifnm,2);
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| 136 |         //  Getting FITS keywords in primary header
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| 137 |         SKM_MergeFITSKeywords(ifnm); 
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| 138 |       }
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| 139 |       if(printlev>0)
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| 140 |         cout << " Output HealPIx Map read - NbPixels= " << 
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| 141 |           outgs.NbPixels() << endl;
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| 142 |       if (printlev > 0) {
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| 143 |         MeanSig(outgs.DataBlock(), moy, sig );
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| 144 |         cout << " MeanSig for outpout map - Mean= " << 
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| 145 |           moy << " Sigma= " << sig << endl;
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| 146 |       }
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| 147 |     }
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| 148 |     else {
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| 149 |       if(printlev>0)
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| 150 |         cout << " Output HealPix Map  created - NbPixels= " << 
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| 151 |           outgs.NbPixels() << endl;
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| 152 |       outgs.SetPixels(0.);
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| 153 |     }
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| 154 |     
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| 155 |     // Decoding detection pass-band filter 
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| 156 |     sr = getSpectralResponse(dc);
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| 157 |     PrtTim(" After FilterCreation ");
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| 158 |     
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| 159 |     char * flnm, buff[90];
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| 160 |     string key;
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| 161 |     
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| 162 |     double K = 1.;
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| 163 |     double freqOfMap = 1.;
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| 164 |     // Loop over sky component 
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| 165 |     int sk;
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| 166 |     for(sk = 0; sk<nskycomp; sk++) {
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| 167 |       cout << "------------------------------------" << endl;
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| 168 |       cout << " Processing sky component No " << sk+1 << endl;
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| 169 |       
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| 170 | 
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| 171 |       sprintf(buff, "%d", sk+1);
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| 172 |       key = (string)"DIPOLE" + buff;
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| 173 |       // check for an eventual dipole
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| 174 |       if(dc.HasKey(key)) 
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| 175 |         {
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| 176 |           if (es) { delete es; es = NULL; }
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| 177 |           double temp = -10.;
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| 178 |           double theta=  dc.DParam(key,1,1.);
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| 179 |           double phi  =  dc.DParam(key,2,1.);
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| 180 |           double amp  =  dc.DParam(key,3,1.);
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| 181 |           if(dc.NbParam(key)>3) 
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| 182 |             {
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| 183 |               temp =  dc.DParam(key,4,1.);
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| 184 |             }
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| 185 |           cout << " creating dipole " << temp << " " << amp << " " << phi << " " << theta << " " << endl;
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| 186 |           addDipole(*sr, outgs,theta,phi,amp,temp);
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| 187 |         }
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| 188 |       else
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| 189 |         {
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| 190 |           sprintf(buff, "%d", sk+1);
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| 191 |           key = (string)"MAPFITSFILE" + buff;
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| 192 |           flnm = BuildFITSFileName(dc.SParam(key, 0));
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| 193 |           
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| 194 |           K = dc.DParam(key, 1, 1.);
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| 195 |           
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| 196 |           cout << " Reading Input FITS map " << (string)flnm << endl;
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| 197 |           SphereHEALPix<float> ings(hp_nside);
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| 198 |           {
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| 199 |             FITS_SphereHEALPix<float> fiosIn(&ings);
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| 200 |             fiosIn.Read(flnm,2);
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| 201 |             //  Getting FITS keywords in primary header
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| 202 |             SKM_MergeFITSKeywords(flnm); 
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| 203 |           }
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| 204 |           if (debuglev > 4) {  // Writing the input map to the outppf
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| 205 |             FIO_SphereHEALPix<float> fiog(ings);
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| 206 |             fiog.Write(*so, key);
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| 207 |           }
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| 208 |           if (printlev > 2) {
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| 209 |             MeanSig(ings.DataBlock(), moy, sig );
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| 210 |             cout << " MeanSig for input map - Mean= " << moy << " Sigma= " << sig << endl;
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| 211 |           }
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| 212 |           bool mapDependentOfFreq = false;
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| 213 |           key = (string)"BETAFITSFILE"+ buff;
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| 214 |           if(dc.HasKey(key)) 
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| 215 |             {
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| 216 |               mapDependentOfFreq = true;
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| 217 |             }
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| 218 |           
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| 219 |           // getting Emission spectra  
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| 220 |           if(!mapDependentOfFreq)
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| 221 |             {
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| 222 |               if (es) { delete es; es = NULL; }
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| 223 |               es = getEmissionSpectra(dc, sk);
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| 224 |               addComponent(*sr, outgs, ings, *es, K);
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| 225 |             }
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| 226 |           else
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| 227 |             {
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| 228 |               key = (string)"BETAFITSFILE"+ buff;
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| 229 |               //SphereHEALPix<float> betaMap;
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| 230 |               flnm = BuildFITSFileName(dc.SParam(key, 0));
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| 231 |               double normFreq = dc.DParam(key, 1, 1.);
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| 232 |               if (printlev > 4) cout << "....BetaFits... normalization Freq = " << normFreq << endl;
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| 233 |               int nSideForInt = dc.DParam(key, 2, 1.);
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| 234 |               if (printlev > 4) cout << "....BetaFits... NSide for Integration map = " << nSideForInt << endl;
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| 235 |               cout << "....BetaFits...  Reading Beta FITS map " << (string)flnm << endl;
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| 236 |               SphereHEALPix<float> betaMap(hp_nside);
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| 237 |               {
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| 238 |                 FITS_SphereHEALPix<float> fiosBM(&betaMap);
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| 239 |                 fiosBM.Read(flnm,2);
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| 240 |                 //  Getting FITS keywords in primary header
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| 241 |                 SKM_MergeFITSKeywords(flnm); 
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| 242 |               }
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| 243 |               if (printlev > 2) {
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| 244 |                 MeanSig(betaMap.DataBlock(), moy, sig );
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| 245 |                 cout << " MeanSig for Beta map - Mean= " << moy << " Sigma= " << sig << endl;
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| 246 |               }
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| 247 |               if (debuglev > 4) {  // Writing the input map to the outppf
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| 248 |                 FIO_SphereHEALPix<float> fiogs(betaMap);
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| 249 |                 fiogs.Write(*so, key);
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| 250 |               }
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| 251 |               
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| 252 |               if(nSideForInt<0) nSideForInt = sqrt((double)betaMap.NbPixels()/12);
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| 253 |               bool bydefault = true;
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| 254 |               if(!bydefault)
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| 255 |                 addComponentBeta(outgs,ings,*sr,betaMap,normFreq, K);
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| 256 |               else
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| 257 |                 {
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| 258 |                   // integrate the betamap over the SpectralResponse
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| 259 |                   SphereHEALPix<float> intBetaMap(nSideForInt);
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| 260 |                   integratedMap(*sr, betaMap, normFreq, intBetaMap);
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| 261 |                   if (debuglev > 4) {  // Writing the input map to the outppf
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| 262 |                     FIO_SphereHEALPix<float> fiogs2(intBetaMap);
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| 263 |                     fiogs2.Write(*so, "INTBETAMAP");
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| 264 |                   }
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| 265 |                   
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| 266 |                   betaMap.Resize(8);
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| 267 |                   if (printlev > 4)
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| 268 |                     {
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| 269 |                       MeanSig(intBetaMap.DataBlock(), moy, sig );
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| 270 |                       cout << "....BetaFits... MeanSig for intBetaMap - Mean= " 
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| 271 |                            << moy << " Sigma= " << sig << endl;
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| 272 |                     }
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| 273 |                   // add the integrated beta map 
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| 274 |                   addComponentBeta(outgs,ings,intBetaMap, K);
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| 275 |                 }
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| 276 |             }
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| 277 |           
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| 278 |           MeanSig(outgs.DataBlock(), moy, sig );
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| 279 |           cout << " MeanSig for Sum map - Mean= " << moy << " Sigma= " << sig << endl;
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| 280 |           cout << "-------------------------------------------------" << endl;
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| 281 |           
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| 282 |           sprintf(buff, "End of Processing Component %d ", sk+1);
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| 283 |           PrtTim(buff);
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| 284 |         } 
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| 285 |     }
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| 286 |   }
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| 287 |   catch(PException exc) 
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| 288 |     {
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| 289 |       cout << "catched PException" << endl;
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| 290 |       msg = exc.Msg();
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| 291 |       cerr << " !!!! skymixer - Catched exception - Msg= " << exc.Msg() << endl;
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| 292 |       rc = 50;
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| 293 |       return(50);
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| 294 |     } 
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| 295 |   
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| 296 |  try {
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| 297 |  // Saving the output map in FITS format 
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| 298 |    cout << "Output Map (SphereHEALPix<float>) written to FITS file " 
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| 299 |         << (string)(arg[2]) << endl;
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| 300 |    {
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| 301 |      FitsOutFile fios(arg[2]);
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| 302 |      fios.firstImageOnPrimaryHeader(false); // Use secondary header 
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| 303 |      DVList& dvl = (*dvl_fitskw);
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| 304 |      dvl["PDMTYPE"] = "COMPMAP";
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| 305 |      dvl.SetComment("PDMTYPE", "Planck Data Model Type"); 
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| 306 |      dvl["SOPHYVER"] =  SophyaVersion();
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| 307 |      dvl.SetComment("SOPHYVER", "Sophya Version number"); 
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| 308 |      dvl["SKYMVER"] =  skm_version;
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| 309 |      dvl.SetComment("SKYMVER", "skymixer Version number"); 
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| 310 |      fios.DVListIntoPrimaryHeader(dvl);  
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| 311 |      fios << outgs ;
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| 312 |    }
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| 313 |    PrtTim("End of WriteFITS ");
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| 314 |    // Saving the output map in PPF format 
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| 315 |    if (narg > 3) {
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| 316 |      POutPersist s(arg[3]); 
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| 317 |      FIO_SphereHEALPix<float> fiog(&outgs) ;
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| 318 |      fiog.Write(s);
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| 319 |      cout << "Output Map (SphereHEALPix<float>) written to POutPersist file "  
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| 320 |           << (string)(arg[3]) << endl;
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| 321 |      PrtTim("End of WritePPF ");
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| 322 |    }
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| 323 |  }
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| 324 |  catch(PException exc) 
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| 325 |    {
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| 326 |      cout << "catched PException (2)" << endl;
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| 327 |      msg = exc.Msg();
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| 328 |      cerr << " !!!! skymixer(2) - Catched exception - Msg= " << exc.Msg() << endl;
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| 329 |      rc = 55;
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| 330 |      return(55);
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| 331 |    } 
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| 332 | 
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| 333 |  if (so) delete so;  //  Closing the debug ppf file 
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| 334 |  return(rc);
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| 335 | }
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| 336 | 
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| 337 | /* Nouvelle-Fonction */
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| 338 | int CheckCards(DataCards & dc, string & msg)
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| 339 | //   Function to check datacards
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| 340 | {
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| 341 | rdmap = false;
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| 342 | mapPath[0] = '\0';
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| 343 | hp_nside = 32;
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| 344 | nskycomp = 0;
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| 345 | debuglev  = 0;
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| 346 | printlev = 0;
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| 347 | 
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| 348 | int rc = 0;
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| 349 | string key, key2,key3;
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| 350 | 
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| 351 |   //  Cheking datacards
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| 352 |   if (dc.NbParam("SKYMIX") < 2)   {
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| 353 |      rc = 71; 
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| 354 |      msg = "Invalid parameters  - Check @SKYMIX card ";
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| 355 |      return(rc);
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| 356 |   }
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| 357 |   key = "READMAP";
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| 358 |   if (dc.HasKey(key)) {
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| 359 |     if (dc.NbParam(key) < 1) {
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| 360 |      rc = 72; 
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| 361 |      msg = "Invalid parameters  - Check @READMAP card ";
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| 362 |      return(rc);
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| 363 |     }
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| 364 |    else rdmap = true;
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| 365 |   }
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| 366 | 
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| 367 | //  Checking detection filter specification 
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| 368 |   key = "GAUSSFILTER";
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| 369 |   key2 = "FILTERFITSFILE";
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| 370 |   key3 = "DIPOLE";
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| 371 |   if ( (dc.NbParam(key) < 5) && (dc.NbParam(key2) < 3) && (dc.NbParam(key3) < 3)) { 
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| 372 |     msg = "Missing card or parameters : Check @GAUSSFILTER or @FILTERFITSFILE or @DIPOLE";
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| 373 |     rc = 73;  return(rc); 
 | 
|---|
| 374 |     }
 | 
|---|
| 375 | 
 | 
|---|
| 376 |   // Decoding number of component and pixelisation parameter
 | 
|---|
| 377 |   int mg = 32;
 | 
|---|
| 378 |   int ncomp = 0;
 | 
|---|
| 379 |   ncomp = dc.IParam("SKYMIX", 0, 0);
 | 
|---|
| 380 |   mg = dc.IParam("SKYMIX", 1, 32);
 | 
|---|
| 381 |   if (ncomp < 1)  {
 | 
|---|
| 382 |     msg = "Invalid parameters  - Check datacards @SKYMIX ";
 | 
|---|
| 383 |     rc = 74;
 | 
|---|
| 384 |     return(rc);
 | 
|---|
| 385 |   }
 | 
|---|
| 386 | 
 | 
|---|
| 387 |   // Checking detection filter specification
 | 
|---|
| 388 |   //  Checking input FITS file specifications 
 | 
|---|
| 389 |   int kc;
 | 
|---|
| 390 |   char buff[256];
 | 
|---|
| 391 |   bool pb = false;
 | 
|---|
| 392 |   string key4;
 | 
|---|
| 393 |   string key5;
 | 
|---|
| 394 |   string key6;
 | 
|---|
| 395 |   for(kc=0; kc<ncomp; kc++) {
 | 
|---|
| 396 |     sprintf(buff, "MAPFITSFILE%d", kc+1);
 | 
|---|
| 397 |     key = buff;
 | 
|---|
| 398 |     sprintf(buff, "DIPOLE%d", kc+1);
 | 
|---|
| 399 |     key3 = buff;
 | 
|---|
| 400 |     if (dc.NbParam(key) < 1 && dc.NbParam(key3)<1) {   
 | 
|---|
| 401 |       msg = "Missing or invalid card : " + key + " " + key2 + " " + key3;
 | 
|---|
| 402 |       pb = true;  break;
 | 
|---|
| 403 |     }
 | 
|---|
| 404 |     sprintf(buff, "SPECTRAFITSFILE%d", kc+1);
 | 
|---|
| 405 |     key = buff;
 | 
|---|
| 406 |     sprintf(buff, "BLACKBODY%d", kc+1);
 | 
|---|
| 407 |     key2 = buff;
 | 
|---|
| 408 |     sprintf(buff, "POWERLAWSPECTRA%d", kc+1);
 | 
|---|
| 409 |     key3 = buff;
 | 
|---|
| 410 |     sprintf(buff, "BETAFITSFILE%d", kc+1);
 | 
|---|
| 411 |     key4 = buff;
 | 
|---|
| 412 |     sprintf(buff, "DIPOLE%d", kc+1);
 | 
|---|
| 413 |     key5 = buff;
 | 
|---|
| 414 |     sprintf(buff, "DERIVBB%d", kc+1);
 | 
|---|
| 415 |     key6 = buff;
 | 
|---|
| 416 |     if ( (dc.NbParam(key) < 3) && (dc.NbParam(key2) < 1) && (dc.NbParam(key3) < 6) && (dc.NbParam(key4)<2)
 | 
|---|
| 417 |          &&  (dc.NbParam(key6)<1) &&  (dc.NbParam(key5)<3))  {   
 | 
|---|
| 418 |       msg = "Missing card or invalid parameters : " + key + " " + key2 + " " + key3 + " " + key4+ " " + key5;
 | 
|---|
| 419 |       pb = true;  break;
 | 
|---|
| 420 |     }
 | 
|---|
| 421 | 
 | 
|---|
| 422 |     }
 | 
|---|
| 423 | 
 | 
|---|
| 424 |   if (pb)  {
 | 
|---|
| 425 |     rc = 75;
 | 
|---|
| 426 |     return(75);
 | 
|---|
| 427 |   }
 | 
|---|
| 428 | 
 | 
|---|
| 429 | 
 | 
|---|
| 430 | // Initialiazing parameters
 | 
|---|
| 431 |   rc = 0;
 | 
|---|
| 432 |   msg = "OK";
 | 
|---|
| 433 |   nskycomp = ncomp;
 | 
|---|
| 434 |   hp_nside = mg;  
 | 
|---|
| 435 | 
 | 
|---|
| 436 | // Checking for PATH definition card
 | 
|---|
| 437 |   key = "MAPPATH";
 | 
|---|
| 438 |   if (dc.NbParam(key) < 3)  strncpy(mapPath, dc.SParam(key, 0).c_str(), 255);
 | 
|---|
| 439 |   mapPath[255] = '\0';
 | 
|---|
| 440 |   key = "DEBUGLEVEL";
 | 
|---|
| 441 |   debuglev =  dc.IParam(key, 0, 0);
 | 
|---|
| 442 |   key = "PRINTLEVEL";
 | 
|---|
| 443 |   printlev =  dc.IParam(key, 0, 0);
 | 
|---|
| 444 |   return(rc);
 | 
|---|
| 445 | }
 | 
|---|
| 446 | 
 | 
|---|
| 447 | static char buff_flnm[1024];   // Mal protege !
 | 
|---|
| 448 | /* Nouvelle-Fonction */
 | 
|---|
| 449 | char* BuildFITSFileName(string const & fname)
 | 
|---|
| 450 | {
 | 
|---|
| 451 | if (mapPath[0] != '\0') sprintf(buff_flnm, "%s/%s", mapPath, fname.c_str());
 | 
|---|
| 452 | else sprintf(buff_flnm, "%s", fname.c_str());
 | 
|---|
| 453 | return(buff_flnm);
 | 
|---|
| 454 | }
 | 
|---|
| 455 | 
 | 
|---|
| 456 | /* Nouvelle-Fonction */
 | 
|---|
| 457 | SpectralResponse * getSpectralResponse(DataCards & dc)
 | 
|---|
| 458 | {
 | 
|---|
| 459 |   SpectralResponse * filt = NULL;
 | 
|---|
| 460 | 
 | 
|---|
| 461 |   string key = "FILTERFITSFILE";
 | 
|---|
| 462 |   string key2 = "GAUSSFILTER";
 | 
|---|
| 463 |   string ppfname = "filter";
 | 
|---|
| 464 | 
 | 
|---|
| 465 |   if (dc.HasKey(key) ) {      // Reading FITS filter file
 | 
|---|
| 466 |     char ifnm[256];
 | 
|---|
| 467 |     strncpy(ifnm, dc.SParam(key, 1).c_str(), 255);
 | 
|---|
| 468 |     ifnm[255] = '\0';
 | 
|---|
| 469 |     Matrix mtx;
 | 
|---|
| 470 |     FitsInFile fiis(ifnm);
 | 
|---|
| 471 |     fiis.firstImageOnPrimaryHeader(false); // Use secondary header HDU=2
 | 
|---|
| 472 |     fiis >> mtx ; 
 | 
|---|
| 473 |     //  Getting FITS keywords in primary header
 | 
|---|
| 474 |     SKM_MergeFITSKeywords(ifnm); 
 | 
|---|
| 475 |     double numin = dc.DParam(key, 2, 1.);
 | 
|---|
| 476 |     double numax = dc.DParam(key, 3, 9999.);
 | 
|---|
| 477 |     Vector nu(mtx.NCols());
 | 
|---|
| 478 |     Vector fnu(mtx.NCols());
 | 
|---|
| 479 |     for(int k=0; k<mtx.NCols(); k++) {
 | 
|---|
| 480 |       nu(k) = mtx(0, k);
 | 
|---|
| 481 |       fnu(k) = mtx(1, k);
 | 
|---|
| 482 |     }
 | 
|---|
| 483 |   filt = new SpecRespVec(nu, fnu, numin, numax);
 | 
|---|
| 484 |   ppfname = key;
 | 
|---|
| 485 |   }
 | 
|---|
| 486 |   else if (dc.HasKey(key2) ) {   // creating GaussianFilter 
 | 
|---|
| 487 |     double nu0 = dc.DParam(key2, 0, 10.);
 | 
|---|
| 488 |     double s = dc.DParam(key2, 1, 1.);
 | 
|---|
| 489 |     double a = dc.DParam(key2, 2, 1.);
 | 
|---|
| 490 |     double numin = dc.DParam(key2, 3, 0.1);
 | 
|---|
| 491 |     double numax = dc.DParam(key2, 4, 9999);
 | 
|---|
| 492 |     filt = new GaussianFilter(nu0, s, a, numin, numax);
 | 
|---|
| 493 |     ppfname = key2;
 | 
|---|
| 494 |     }
 | 
|---|
| 495 |   if (filt == NULL) throw ParmError("datacard error ! No detection filter");
 | 
|---|
| 496 |   if(printlev>0)
 | 
|---|
| 497 |     {
 | 
|---|
| 498 |       cout << endl;
 | 
|---|
| 499 |       cout << " Filter decoded - Created " << endl;
 | 
|---|
| 500 |       cout << *filt << endl;
 | 
|---|
| 501 |     }
 | 
|---|
| 502 |   // for debug
 | 
|---|
| 503 |   if (debuglev > 1)  SpectralResponse2Nt(*filt, *so, ppfname);
 | 
|---|
| 504 |   return(filt);
 | 
|---|
| 505 | }
 | 
|---|
| 506 | 
 | 
|---|
| 507 | /* Nouvelle-Fonction */
 | 
|---|
| 508 | RadSpectra * getEmissionSpectra(DataCards & dc, int nc)
 | 
|---|
| 509 | {
 | 
|---|
| 510 |   char numb[16];
 | 
|---|
| 511 |   sprintf(numb, "%d", nc+1);
 | 
|---|
| 512 | 
 | 
|---|
| 513 |   string key = (string)"SPECTRAFITSFILE" + numb;
 | 
|---|
| 514 |   string key2 = (string)"BLACKBODY" + numb;
 | 
|---|
| 515 |   string key5 = (string)"DERIVBB" + numb;
 | 
|---|
| 516 |   string key3 = (string)"POWERLAWSPECTRA" + numb;
 | 
|---|
| 517 |   string ppfname = "espectra";
 | 
|---|
| 518 | 
 | 
|---|
| 519 |   RadSpectra * rs = NULL;
 | 
|---|
| 520 |   if (dc.HasKey(key) ) {    // Reading emission spectra from file
 | 
|---|
| 521 |     char * ifnm = BuildFITSFileName(dc.SParam(key, 0));
 | 
|---|
| 522 |     cout << " Reading Input FITS spectra file " << (string)ifnm << endl;
 | 
|---|
| 523 |     Matrix mtx;
 | 
|---|
| 524 |     FitsInFile fiis(ifnm);
 | 
|---|
| 525 |     fiis.firstImageOnPrimaryHeader(false); // Use secondary header HDU=2
 | 
|---|
| 526 |     fiis >> mtx ; 
 | 
|---|
| 527 |     //  Getting FITS keywords in primary header
 | 
|---|
| 528 |     SKM_MergeFITSKeywords(ifnm); 
 | 
|---|
| 529 |     double numin = dc.DParam(key, 2, 1.);
 | 
|---|
| 530 |     double numax = dc.DParam(key, 3, 9999.);
 | 
|---|
| 531 |     Vector nu(mtx.NCols());
 | 
|---|
| 532 |     Vector tnu(mtx.NCols());
 | 
|---|
| 533 |     for(int k=0; k<mtx.NCols(); k++) {
 | 
|---|
| 534 |       nu(k) = mtx(0, k);
 | 
|---|
| 535 |       tnu(k) = mtx(1, k);
 | 
|---|
| 536 |     }
 | 
|---|
| 537 |   rs = new RadSpectraVec(nu, tnu, numin, numax);
 | 
|---|
| 538 |   ppfname = key;
 | 
|---|
| 539 |   }
 | 
|---|
| 540 |   else if (dc.HasKey(key2) ) { // Creating BlackBody emission spectra
 | 
|---|
| 541 |     rs = new BlackBody(dc.DParam(key2, 0, 2.726));
 | 
|---|
| 542 |     ppfname = key2;
 | 
|---|
| 543 |   }
 | 
|---|
| 544 |   else if (dc.HasKey(key5) ) { // Creating Dipole
 | 
|---|
| 545 |     rs = new DerivBlackBody(dc.DParam(key5, 0, 3.E-3));
 | 
|---|
| 546 |     ppfname = key5;
 | 
|---|
| 547 |   }
 | 
|---|
| 548 |   else if (dc.HasKey(key3) ) { // Creating PowerLaw emission spectra
 | 
|---|
| 549 |     double a = dc.DParam(key3, 0, 1.);
 | 
|---|
| 550 |     double nu0 = dc.DParam(key3, 1, 100.);
 | 
|---|
| 551 |     double dnu = dc.DParam(key3, 2, 10.);
 | 
|---|
| 552 |     double b = dc.DParam(key3, 3, 0.);
 | 
|---|
| 553 |     double numin = dc.DParam(key3, 4, 0.1);
 | 
|---|
| 554 |     double numax = dc.DParam(key3, 5, 9999);
 | 
|---|
| 555 |     rs = new PowerLawSpectra(a, b, nu0, dnu, numin, numax);
 | 
|---|
| 556 |     ppfname = key3;
 | 
|---|
| 557 |   }
 | 
|---|
| 558 |   if (rs == NULL) throw ParmError("datacard error ! missing Emission spectra");
 | 
|---|
| 559 |   cout << " Emission spectra decoded - Created (" << ppfname << ")" << endl;
 | 
|---|
| 560 |   cout << *rs << endl;
 | 
|---|
| 561 | // for debug
 | 
|---|
| 562 |   if (debuglev > 2)  RadSpec2Nt(*rs, *so, ppfname);
 | 
|---|
| 563 |   return(rs);
 | 
|---|
| 564 | }
 | 
|---|
| 565 | 
 | 
|---|
| 566 | 
 | 
|---|
| 567 | 
 | 
|---|
| 568 | 
 | 
|---|
| 569 | template <class T> 
 | 
|---|
| 570 | void addDipole(SpectralResponse&  sr,  PixelMap<T>& finalMap, 
 | 
|---|
| 571 |                double theta,double phi,double amp,double temp)
 | 
|---|
| 572 | {
 | 
|---|
| 573 |   DerivBlackBody dbb;
 | 
|---|
| 574 |   if(temp>0) dbb.setTemperature(temp);
 | 
|---|
| 575 |   double coeff = dbb.filteredIntegratedFlux(sr) * amp;
 | 
|---|
| 576 |   UnitVector vd(theta,phi);
 | 
|---|
| 577 |   UnitVector vc(theta,phi);
 | 
|---|
| 578 |   
 | 
|---|
| 579 |   for(int i=0; i<finalMap.NbPixels(); i++)
 | 
|---|
| 580 |     {
 | 
|---|
| 581 |       double thetar,phir;
 | 
|---|
| 582 |       finalMap.PixThetaPhi(i,thetar,phir);      
 | 
|---|
| 583 |       vc.SetThetaPhi(thetar,  phir);
 | 
|---|
| 584 |       finalMap(i) += vd.Psc(vc)*coeff;
 | 
|---|
| 585 |     }
 | 
|---|
| 586 |   if (debuglev > 4) {  // Writing the input map to the outppf
 | 
|---|
| 587 |     SphereHEALPix<float> ings(sqrt((double)finalMap.NbPixels()/12));
 | 
|---|
| 588 |     for(int i=0; i<finalMap.NbPixels(); i++)
 | 
|---|
| 589 |       {
 | 
|---|
| 590 |         double thetar,phir;
 | 
|---|
| 591 |         finalMap.PixThetaPhi(i,thetar,phir);      
 | 
|---|
| 592 |         vc.SetThetaPhi(thetar,  phir);
 | 
|---|
| 593 |         ings(i) = vd.Psc(vc);
 | 
|---|
| 594 |       }
 | 
|---|
| 595 |     FIO_SphereHEALPix<float> fiog(ings);
 | 
|---|
| 596 |     fiog.Write(*so, "dipole");
 | 
|---|
| 597 |     cout << "Debug the dipole map....saved in debug file !" << endl;
 | 
|---|
| 598 |   }
 | 
|---|
| 599 | }
 | 
|---|
| 600 | /* Nouvelle-Fonction */
 | 
|---|
| 601 | template <class T> 
 | 
|---|
| 602 | void addComponent(SpectralResponse&  sr, PixelMap<T>& finalMap, 
 | 
|---|
| 603 |                   PixelMap<T>& mapToAdd, RadSpectra& rs, double K)
 | 
|---|
| 604 | {
 | 
|---|
| 605 |   // finalMap = finalMap + coeff* mapToAdd
 | 
|---|
| 606 |   // coeff    =  convolution of sr and rs 
 | 
|---|
| 607 |   // compute the coefficient corresponding to mapToAdd
 | 
|---|
| 608 |   if (finalMap.NbPixels() != mapToAdd.NbPixels())   
 | 
|---|
| 609 |     throw SzMismatchError("addComponent()/Error: Unequal number of Input/Output map pixels");
 | 
|---|
| 610 |   double coeff = rs.filteredIntegratedFlux(sr) * K;
 | 
|---|
| 611 |   if (printlev > 1) 
 | 
|---|
| 612 |     cout << " addComponent - Coeff= " << coeff << " (K= " << K << ")" << endl; 
 | 
|---|
| 613 |   for(int i=0; i<finalMap.NbPixels(); i++)
 | 
|---|
| 614 |     {
 | 
|---|
| 615 |       finalMap(i) += coeff * mapToAdd(i);
 | 
|---|
| 616 |     }
 | 
|---|
| 617 | }
 | 
|---|
| 618 | /* Nouvelle-Fonction */
 | 
|---|
| 619 | template <class T> 
 | 
|---|
| 620 | void addComponentBeta(SphereHEALPix<T>& finalMap, 
 | 
|---|
| 621 |                       SphereHEALPix<T>& mapToAdd,SpectralResponse& sr, 
 | 
|---|
| 622 |                       SphereHEALPix<T>& betaMap, double normFreq, double K)
 | 
|---|
| 623 | {
 | 
|---|
| 624 |   // finalMap = finalMap + coeff* mapToAdd
 | 
|---|
| 625 |   // coeff    =  convolution of sr and rs 
 | 
|---|
| 626 |   // compute the coefficient corresponding to mapToAdd
 | 
|---|
| 627 |   // betaMap is the map of (beta(theta,phi)) 
 | 
|---|
| 628 | 
 | 
|---|
| 629 |   int nbpix = finalMap.NbPixels();
 | 
|---|
| 630 |   if (nbpix != mapToAdd.NbPixels())   
 | 
|---|
| 631 |     throw SzMismatchError("addComponentBeta()/Error: Unequal number of Input/Output map pixels");
 | 
|---|
| 632 |   if (printlev > 1) 
 | 
|---|
| 633 |     {
 | 
|---|
| 634 |       cout << "addComponentBeta - Coeff= "  << K  << endl; 
 | 
|---|
| 635 |       cout << "nb pixels: " << finalMap.NbPixels() << endl;
 | 
|---|
| 636 |     }
 | 
|---|
| 637 |   SphereHEALPix<T> bigBetaMap(sqrt((double)nbpix/12));
 | 
|---|
| 638 |   if(nbpix != betaMap.NbPixels())
 | 
|---|
| 639 |     {
 | 
|---|
| 640 |        Sph2Sph(betaMap,bigBetaMap);
 | 
|---|
| 641 |      }
 | 
|---|
| 642 |   for(int i=0; i<finalMap.NbPixels(); i++)
 | 
|---|
| 643 |     {
 | 
|---|
| 644 |       // coeff = integration of (nu/normFreq)^(-beta(theta,phi)) in each pixels
 | 
|---|
| 645 |       RadSpectra* rs =  new PowerLawSpectra
 | 
|---|
| 646 |         (1.,-bigBetaMap(i), 0., normFreq, 0.01, 800.);
 | 
|---|
| 647 |       double coeff = rs->filteredIntegratedFlux(sr);
 | 
|---|
| 648 |       finalMap(i) += coeff*K*mapToAdd(i);
 | 
|---|
| 649 |     }
 | 
|---|
| 650 | }
 | 
|---|
| 651 | 
 | 
|---|
| 652 | template <class T>
 | 
|---|
| 653 | void integratedMap(SpectralResponse&  sr,   
 | 
|---|
| 654 |                    SphereHEALPix<T>& betaMap, 
 | 
|---|
| 655 |                    double normFreq, 
 | 
|---|
| 656 |                    SphereHEALPix<T>& intBetaMap)
 | 
|---|
| 657 | {
 | 
|---|
| 658 |   PowerLawSpectra rs(1.,-2., 0., normFreq);
 | 
|---|
| 659 |   
 | 
|---|
| 660 |   if(betaMap.NbPixels()!=intBetaMap.NbPixels()) 
 | 
|---|
| 661 |     {
 | 
|---|
| 662 |       Sph2Sph(betaMap,intBetaMap);
 | 
|---|
| 663 |       for(int i=0; i<intBetaMap.NbPixels(); i++)
 | 
|---|
| 664 |         {
 | 
|---|
| 665 |           rs.setExp(-intBetaMap(i));
 | 
|---|
| 666 |           double coeff = rs.filteredIntegratedFlux(sr);
 | 
|---|
| 667 |           intBetaMap(i) = coeff;
 | 
|---|
| 668 |         }
 | 
|---|
| 669 |     }
 | 
|---|
| 670 |   else
 | 
|---|
| 671 |     {      
 | 
|---|
| 672 |       for(int i=0; i<intBetaMap.NbPixels(); i++)
 | 
|---|
| 673 |         {
 | 
|---|
| 674 |           rs.setExp(-betaMap(i));
 | 
|---|
| 675 |           double coeff = rs.filteredIntegratedFlux(sr);
 | 
|---|
| 676 |           intBetaMap(i) = coeff;
 | 
|---|
| 677 |         }
 | 
|---|
| 678 |     }
 | 
|---|
| 679 | }
 | 
|---|
| 680 | 
 | 
|---|
| 681 | template <class T>
 | 
|---|
| 682 | void addComponentBeta(SphereHEALPix<T>& finalMap, 
 | 
|---|
| 683 |                       SphereHEALPix<T>& mapToAdd,SphereHEALPix<T>& intBetaMap, double K)
 | 
|---|
| 684 | {
 | 
|---|
| 685 |   // finalMap = finalMap + coeff* mapToAdd
 | 
|---|
| 686 |   // coeff    =  convolution of sr and rs 
 | 
|---|
| 687 |   // compute the coefficient corresponding to mapToAdd
 | 
|---|
| 688 |   // integBetaMap is the map of the integration (nu/normFreq)^(-beta(theta,phi)) over
 | 
|---|
| 689 |   // the spectralResponse
 | 
|---|
| 690 |   // different from addComponentBeta(PixelMap<T>& finalMap, 
 | 
|---|
| 691 |   //    PixelMap<T>& mapToAdd,SpectralResponse& sr, PixelMap<T>& betaMap, double normFreq, double K)
 | 
|---|
| 692 |   //   since it permits to use a intBetaMap with a different number of pixels than
 | 
|---|
| 693 |   //   the other maps
 | 
|---|
| 694 | 
 | 
|---|
| 695 |   int nbpix = finalMap.NbPixels();
 | 
|---|
| 696 |   if (nbpix != mapToAdd.NbPixels())   
 | 
|---|
| 697 |     throw SzMismatchError("addComponentBeta(PixelMap<T>&,PixelMap<T>&,PixelMap<T>&,double)/Error: Unequal number of Input/Output map pixels");
 | 
|---|
| 698 |   double coeff = K;
 | 
|---|
| 699 | 
 | 
|---|
| 700 |   if(nbpix != intBetaMap.NbPixels())
 | 
|---|
| 701 |     {
 | 
|---|
| 702 |       for(int i=0; i<finalMap.NbPixels();i++)
 | 
|---|
| 703 |         {
 | 
|---|
| 704 |           double teta,phi,val;
 | 
|---|
| 705 |           finalMap.PixThetaPhi(i, teta, phi);
 | 
|---|
| 706 |           int pixel = intBetaMap.PixIndexSph(teta,phi);
 | 
|---|
| 707 |           val = intBetaMap.PixVal(pixel);
 | 
|---|
| 708 |           finalMap(i) += coeff*mapToAdd(i)*val;
 | 
|---|
| 709 |         }
 | 
|---|
| 710 |     }
 | 
|---|
| 711 |   else
 | 
|---|
| 712 |     {
 | 
|---|
| 713 |       for(int i=0; i<finalMap.NbPixels();i++)
 | 
|---|
| 714 |         {
 | 
|---|
| 715 |           finalMap(i) += coeff*mapToAdd(i)*intBetaMap(i);
 | 
|---|
| 716 |         }
 | 
|---|
| 717 |     }
 | 
|---|
| 718 |   if (printlev > 1) 
 | 
|---|
| 719 |     {
 | 
|---|
| 720 |       cout << "addComponentBeta(SG<T>,SG<T>,SG<T>,double) - Coeff= "  << K  << endl;     
 | 
|---|
| 721 |     }
 | 
|---|
| 722 | }
 | 
|---|
| 723 | 
 | 
|---|
| 724 | 
 | 
|---|
| 725 | 
 | 
|---|
| 726 | 
 | 
|---|
| 727 | 
 | 
|---|
| 728 | /* Nouvelle-Fonction */
 | 
|---|
| 729 | void SKM_MergeFITSKeywords(char * flnm)
 | 
|---|
| 730 | {
 | 
|---|
| 731 |   DVList dvl;
 | 
|---|
| 732 |   FitsFile::FitsExtensionType typeOfExtension;
 | 
|---|
| 733 |   int naxis;
 | 
|---|
| 734 |   vector<int> naxisn;
 | 
|---|
| 735 |   FitsFile::FitsDataType dataType;
 | 
|---|
| 736 |   FitsInFile::GetBlockType(flnm, 1, typeOfExtension, naxis, naxisn, dataType, dvl);
 | 
|---|
| 737 |   // Cleaning the keywords 
 | 
|---|
| 738 | #define SZexlst 21
 | 
|---|
| 739 |   char *exlst[SZexlst]=
 | 
|---|
| 740 |   {"SIMPLE","BITPIX" ,"NAXIS" ,"NAXIS#" ,"PCOUNT","GCOUNT",
 | 
|---|
| 741 |      "EXTEND","ORIGIN" ,"DATE*" ,"TFIELDS","TTYPE#","TFORM#",
 | 
|---|
| 742 |      "TUNIT#","EXTNAME","CTYPE#","CRVAL#" ,"CRPIX#","CDELT#",
 | 
|---|
| 743 |      "XTENSION","INSTRUME","TELESCOP"};
 | 
|---|
| 744 |   char  kwex[32];
 | 
|---|
| 745 |   int i,l;
 | 
|---|
| 746 |   for (i=0; i<SZexlst; i++) {
 | 
|---|
| 747 |     strncpy(kwex, exlst[i], 32);
 | 
|---|
| 748 |     l = strlen(kwex)-1;
 | 
|---|
| 749 |     if ((kwex[l] != '*') && (kwex[l] != '#')) {
 | 
|---|
| 750 |       dvl.DeleteKey(kwex);
 | 
|---|
| 751 |     } 
 | 
|---|
| 752 |     else {
 | 
|---|
| 753 |       bool fgd = (kwex[l] == '#') ? true : false;
 | 
|---|
| 754 |       list<string> lstsup;
 | 
|---|
| 755 |       kwex[l] = '\0';
 | 
|---|
| 756 |       DVList::ValList::const_iterator it;
 | 
|---|
| 757 |       for (it = dvl.Begin(); it != dvl.End(); it++) {
 | 
|---|
| 758 |         if ((*it).first.substr(0,l) != kwex) continue;
 | 
|---|
| 759 |         if (fgd && !isdigit((*it).first[l])) continue;
 | 
|---|
| 760 |         lstsup.push_back((*it).first);
 | 
|---|
| 761 |       }
 | 
|---|
| 762 |       list<string>::iterator it2;
 | 
|---|
| 763 |       for (it2 = lstsup.begin(); it2 != lstsup.end(); it2++)
 | 
|---|
| 764 |         dvl.DeleteKey(*it2);
 | 
|---|
| 765 |     }
 | 
|---|
| 766 |   }
 | 
|---|
| 767 |   dvl_fitskw->Merge(dvl);
 | 
|---|
| 768 | }
 | 
|---|
| 769 | 
 | 
|---|
| 770 | /* Nouvelle-Fonction */
 | 
|---|
| 771 | void RadSpec2Nt(RadSpectra & rs, POutPersist & so, string name)
 | 
|---|
| 772 | {
 | 
|---|
| 773 |   char *ntn[2] = {"nu","fnu"};
 | 
|---|
| 774 |   NTuple nt(2,ntn);  // Creation NTuple (AVEC new )
 | 
|---|
| 775 |   float xnt[2];
 | 
|---|
| 776 |   double nu;
 | 
|---|
| 777 |   double numin = rs.minFreq();
 | 
|---|
| 778 |   double numax = rs.maxFreq();
 | 
|---|
| 779 |   int nmax = 500;
 | 
|---|
| 780 |   double dnu = (numax-numin)/nmax;
 | 
|---|
| 781 |   for(int k=0; k<nmax; k++) {
 | 
|---|
| 782 |     nu = numin+k*dnu;
 | 
|---|
| 783 |     xnt[0] = nu;
 | 
|---|
| 784 |     xnt[1] = rs.flux(nu);
 | 
|---|
| 785 |     nt.Fill(xnt);
 | 
|---|
| 786 |   }
 | 
|---|
| 787 |   ObjFileIO<NTuple> oiont(nt);
 | 
|---|
| 788 |   oiont.Write(so, name);
 | 
|---|
| 789 |   return;
 | 
|---|
| 790 | }
 | 
|---|
| 791 | 
 | 
|---|
| 792 | /* Nouvelle-Fonction */
 | 
|---|
| 793 | void SpectralResponse2Nt(SpectralResponse& sr, POutPersist & so, string name)
 | 
|---|
| 794 | {
 | 
|---|
| 795 |   char *ntn[2] = {"nu","tnu"};
 | 
|---|
| 796 |   NTuple nt(2,ntn);  // Creation NTuple (AVEC new )
 | 
|---|
| 797 |   float xnt[2];
 | 
|---|
| 798 |   double nu;
 | 
|---|
| 799 |   double numin = sr.minFreq();
 | 
|---|
| 800 |   double numax = sr.maxFreq();
 | 
|---|
| 801 |   int nmax = 500;
 | 
|---|
| 802 |   double dnu = (numax-numin)/nmax;
 | 
|---|
| 803 |   for(int k=0; k<nmax; k++) {
 | 
|---|
| 804 |     nu = numin+k*dnu;
 | 
|---|
| 805 |     xnt[0] = nu;
 | 
|---|
| 806 |     xnt[1] = sr.transmission(nu);
 | 
|---|
| 807 |     nt.Fill(xnt);
 | 
|---|
| 808 |   }
 | 
|---|
| 809 |   ObjFileIO<NTuple> oiont(nt);
 | 
|---|
| 810 |   oiont.Write(so, name);
 | 
|---|
| 811 |   return;
 | 
|---|
| 812 | }
 | 
|---|
| 813 | 
 | 
|---|