[1654] | 1 | /* Lecteur de colonne de table Fits (binaire ou ASCII) avec buffer */
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[2615] | 2 | #include "sopnamsp.h"
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[1654] | 3 | #include "machdefs.h"
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| 4 | #include <stdlib.h>
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| 5 | #include <stdio.h>
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| 6 | #include "pexceptions.h"
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| 7 | #include "fabtcolread.h"
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[2449] | 8 |
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| 9 | ///////////////////////////////////////////////////////////////////
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| 10 | ///////////////////////////////////////////////////////////////////
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| 11 | ///////////////////////////////////////////////////////////////////
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| 12 | ///////////////////////////////////////////////////////////////////
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| 13 |
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| 14 | //! Class for opening a FITS file for reading
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| 15 |
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| 16 | /*!
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| 17 | \class SOPHYA::FitsOpenFile
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| 18 | \ingroup FitsIOServer
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| 19 | Class for opening a FITS file for reading
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| 20 | */
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| 21 |
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| 22 | /*!
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| 23 | Constructor.
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| 24 | \param fname : FITS file name to be opened for reading
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| 25 | */
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| 26 | FitsOpenFile::FitsOpenFile(string fname)
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| 27 | {
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| 28 | Init(fname.c_str());
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| 29 | }
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| 30 |
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| 31 | /*!
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| 32 | Constructor.
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| 33 | \param cfname : FITS file name to be opened for reading
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| 34 | */
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| 35 | FitsOpenFile::FitsOpenFile(const char *cfname)
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| 36 | {
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| 37 | Init(cfname);
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| 38 | }
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| 39 |
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| 40 | /*!
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| 41 | Constructor by default.
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| 42 | */
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| 43 | FitsOpenFile::FitsOpenFile()
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| 44 | {
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| 45 | FitsFN = "";
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[2456] | 46 | NHdu = IHdu = HduType = 0;
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| 47 | HasBeenPos = false;
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[2449] | 48 | FitsPtr = NULL;
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| 49 | }
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| 50 |
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| 51 | /*!
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| 52 | Constructor by copy.
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| 53 | */
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| 54 | FitsOpenFile::FitsOpenFile(FitsOpenFile& fof)
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| 55 | {
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[2456] | 56 | Init(fof.FileName().c_str());
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[2449] | 57 | }
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| 58 |
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| 59 | /*!
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| 60 | Destructor.
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| 61 | */
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| 62 | FitsOpenFile::~FitsOpenFile()
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| 63 | {
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| 64 | Delete();
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| 65 | FitsFN = "";
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[2456] | 66 | NHdu = IHdu = HduType = 0;
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| 67 | HasBeenPos = false;
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[2449] | 68 | }
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| 69 |
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| 70 | /*!
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| 71 | Delete routine called by the destructor.
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| 72 | */
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| 73 | void FitsOpenFile::Delete(void)
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| 74 | {
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| 75 | if(FitsPtr != NULL) {
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| 76 | int sta = 0;
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| 77 | if(fits_close_file(FitsPtr,&sta)) printerror(sta);
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| 78 | FitsPtr = NULL;
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| 79 | }
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| 80 | }
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| 81 |
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| 82 | /*! Init routine called by the constructor */
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| 83 | void FitsOpenFile::Init(const char* fname)
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| 84 | {
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[2456] | 85 | // Parametres Generaux
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| 86 | FitsFN = fname;
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| 87 | NHdu = IHdu = HduType = 0;
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| 88 | HasBeenPos = false;
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| 89 | FitsPtr = NULL;
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[2449] | 90 |
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[2456] | 91 | // Ouverture du fichier
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| 92 | if(FitsFN.size() <= 0 )
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| 93 | throw ParmError("FitsOpenFile::Init: Fits file name error\n");
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[2449] | 94 |
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[2456] | 95 | int sta = 0;
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| 96 | if(fits_open_file(&FitsPtr,FitsFN.c_str(),READONLY,&sta)) {
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| 97 | printerror(sta);
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| 98 | FitsPtr = NULL;
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| 99 | throw NullPtrError("FitsOpenFile::Init: Error opening Fits file\n");
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| 100 | }
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[2449] | 101 |
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[2456] | 102 | // Get number of hdu
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| 103 | if(fits_get_num_hdus(FitsPtr,&NHdu,&sta)) {
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| 104 | printerror(sta);
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| 105 | NHdu = 0;
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| 106 | Delete();
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| 107 | throw NotAvailableOperation("FitsOpenFile::Init: Error getting NHdu\n");
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| 108 | }
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| 109 | if(NHdu<=0) {
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| 110 | Delete();
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| 111 | throw SzMismatchError("FitsOpenFile::Init: Bad NHdu\n");
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| 112 | }
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[2449] | 113 |
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[2456] | 114 | MoveToHDU(1);
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| 115 | }
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| 116 |
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| 117 | /*! Move to an HDU
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| 118 | \param ihdu: hdu number to move
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| 119 | \warning ihdu = [1,nhdu]
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| 120 | \return 0 if positionning failed, ihdu if success
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| 121 | */
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| 122 | int FitsOpenFile::MoveToHDU(int ihdu)
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| 123 | {
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| 124 | if(FitsPtr==NULL)
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| 125 | throw NullPtrError("FitsOpenFile::MoveToHDU: no fits file open FitsPtr==NULL\n");
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| 126 | int ihdusave = IHdu;
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| 127 | if(ihdu<=0) ihdu=1; if(ihdu>NHdu) ihdu=NHdu;
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| 128 | int sta=0;
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| 129 | if(fits_movabs_hdu(FitsPtr,ihdu,&HduType,&sta)) {
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| 130 | printerror(sta);
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| 131 | // On se repositionne ou on etait
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| 132 | fits_movabs_hdu(FitsPtr,ihdusave,&HduType,&sta);
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| 133 | IHdu = ihdusave;
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| 134 | } else IHdu = ihdu;
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| 135 | return IHdu;
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| 136 | }
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| 137 |
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| 138 | /*! Move to the first HDU of a certain type
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| 139 | \param hdutype: type of the hdu
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| 140 | \param hdudeb: start at that hdu
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| 141 | \return the type of HDU the file is positionned
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| 142 | */
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| 143 | int FitsOpenFile::MoveToFirst(int hdutype,int ihdudeb)
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| 144 | {
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| 145 | if(ihdudeb<=0) ihdudeb=1; if(ihdudeb>NHdu) ihdudeb=NHdu;
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| 146 | int ihdusave = IHdu;
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| 147 | for(int ihdu=ihdudeb;ihdu<=NHdu;ihdu++) {
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| 148 | MoveToHDU(ihdu);
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| 149 | if(HduType==hdutype) break;
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[2449] | 150 | }
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[2456] | 151 | // Si echec, on se repositionne ou on etait
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| 152 | if(HduType!=hdutype) MoveToHDU(ihdusave);
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| 153 | return HduType;
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| 154 | }
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[2449] | 155 |
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[2456] | 156 | /*! Move to the last HDU of a certain type
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| 157 | \param hdutype: type of the hdu
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| 158 | \param hdudeb: stop at that hdu
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| 159 | \return the type of HDU the file is positionned
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| 160 | */
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| 161 | int FitsOpenFile::MoveToLast(int hdutype,int ihdudeb)
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| 162 | {
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| 163 | if(ihdudeb<=0) ihdudeb=1; if(ihdudeb>NHdu) ihdudeb=NHdu;
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| 164 | int ihdusave = IHdu;
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| 165 | for(int ihdu=NHdu;ihdu>=ihdudeb;ihdu--) {
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| 166 | MoveToHDU(ihdu);
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| 167 | if(HduType==hdutype) break;
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| 168 | }
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| 169 | // Si echec, on se repositionne ou on etait
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| 170 | if(HduType!=hdutype) MoveToHDU(ihdusave);
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| 171 | return HduType;
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| 172 | }
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| 173 |
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| 174 | /*! Print */
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| 175 | void FitsOpenFile::Print(void)
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| 176 | {
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| 177 | cout<<"FitsOpenFile::Print: "<<FitsFN
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| 178 | <<" hdu="<<IHdu<<"/"<<NHdu<<" type="<<HduType
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| 179 | <<" hasbeenpos="<<HasBeenPos<<endl;
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| 180 | }
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| 181 |
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[2453] | 182 | //////////////////////////////////////////////////////////////
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| 183 | //// Methodes statiques
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| 184 | //////////////////////////////////////////////////////////////
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| 185 | /*!
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| 186 | Read a fitsheader key into double
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| 187 | \param fitsptr : cfitio pointer to Fits file
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| 188 | \param keyname : name of the key
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| 189 | \return value into double
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| 190 | */
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[3572] | 191 | double FitsOpenFile::ReadKey(fitsfile *fitsptr,const char *keyname)
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[2453] | 192 | {
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[2456] | 193 | if(keyname==NULL || fitsptr==NULL) return 0.;
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[2453] | 194 | int sta=0; double val=0.;
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| 195 | if(fits_read_key(fitsptr,TDOUBLE,keyname,&val,NULL,&sta))
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| 196 | printerror(sta);
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| 197 | return val;
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| 198 | }
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| 199 |
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| 200 | /*!
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| 201 | Read a fitsheader key into long
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| 202 | \param fitsptr : cfitio pointer to Fits file
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| 203 | \param keyname : name of the key
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| 204 | \return value into long
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| 205 | */
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[3572] | 206 | long FitsOpenFile::ReadKeyL(fitsfile *fitsptr,const char *keyname)
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[2453] | 207 | {
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[2456] | 208 | if(keyname==NULL || fitsptr==NULL) return 0;
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[2453] | 209 | int sta=0; long val=0;
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| 210 | if(fits_read_key(fitsptr,TLONG,keyname,&val,NULL,&sta))
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| 211 | printerror(sta);
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| 212 | return val;
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| 213 | }
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| 214 |
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| 215 | /*!
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[3128] | 216 | Read a fitsheader key into long
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| 217 | \param fitsptr : cfitio pointer to Fits file
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| 218 | \param keyname : name of the key
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| 219 | \return value into long long
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| 220 | */
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[3572] | 221 | LONGLONG FitsOpenFile::ReadKeyLL(fitsfile *fitsptr,const char *keyname)
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[3128] | 222 | {
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| 223 | if(keyname==NULL || fitsptr==NULL) return 0;
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| 224 | int sta=0; LONGLONG val=0;
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| 225 | if(fits_read_key(fitsptr,TLONGLONG,keyname,&val,NULL,&sta))
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| 226 | printerror(sta);
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| 227 | return val;
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| 228 | }
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| 229 |
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| 230 | /*!
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[2453] | 231 | Read a fitsheader key into string
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| 232 | \param fitsptr : cfitio pointer to Fits file
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| 233 | \param keyname : name of the key
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| 234 | \return value into string
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| 235 | */
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[3572] | 236 | string FitsOpenFile::ReadKeyS(fitsfile *fitsptr,const char *keyname)
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[2453] | 237 | {
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[2456] | 238 | if(keyname==NULL || fitsptr==NULL) return (string)"";
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[2453] | 239 | int sta=0; char val[FLEN_VALUE];
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| 240 | if(fits_read_key(fitsptr,TSTRING,keyname,val,NULL,&sta))
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| 241 | printerror(sta);
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| 242 | string sval = val;
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| 243 | return sval;
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| 244 | }
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| 245 |
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| 246 | /*!
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| 247 | CFitsIO error printing routine
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| 248 | \param sta : cfitio error return code
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| 249 | */
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| 250 | void FitsOpenFile::printerror(int sta)
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[2449] | 251 | {
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| 252 | int stat = sta;
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| 253 | fits_report_error(stdout,stat);
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| 254 | fflush(stdout);
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| 255 | return;
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| 256 | }
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| 257 |
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| 258 | ///////////////////////////////////////////////////////////////////
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| 259 | ///////////////////////////////////////////////////////////////////
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| 260 | ///////////////////////////////////////////////////////////////////
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| 261 | ///////////////////////////////////////////////////////////////////
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| 262 |
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| 263 | ///////////////////////////////////////////////////////////////////
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[1654] | 264 | //! Class for reading a column in a FITS ASCII or BINARY table
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| 265 |
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| 266 | /*!
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[2449] | 267 | \class SOPHYA::FitsABTColRd
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[1654] | 268 | \ingroup FitsIOServer
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[2789] | 269 | Class for reading a column in a FITS ASCII or BINARY table.
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| 270 | You can read many columns of the same FITS table by instanciating
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| 271 | many FitsABTColRd on the same FitsOpenFile. So, the FITS file is
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| 272 | opened only once. Of course the various FitsABTColRd must read
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| 273 | the same FITS file HDU.
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[1654] | 274 | \verbatim
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[1659] | 275 | -- Exemple:
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[2449] | 276 | // Open the fits file with FitsOpenFile
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| 277 | FitsOpenFile fof = new FitsOpenFile("myfits.fits");
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| 278 | // Select the column to be read
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| 279 | FitsABTColRd fbt(fof,"BoloMuv_28",0,1000,1,3);
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[2456] | 280 | FitsABTColRd fbt2(fof,"BoloMuv_29",0,1000,1,3);
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[1654] | 281 | fbt.SetDebug(3);
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| 282 | fbt.Print(3);
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[1659] | 283 | // Read element by element
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[3128] | 284 | for(LONGLONG i=0;i<fbt.GetNbLine();i++) {
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[1654] | 285 | double x = fbt.Read(i);
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[2456] | 286 | double y = fbt2.Read(i);
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| 287 | if(i%lpmod==0) cout<<i<<": "<<x<<", "<<y<<endl;
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[1654] | 288 | }
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[1659] | 289 | // Read into a vector
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| 290 | TVector<double> data;
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[3128] | 291 | LONGLONG n = fbt.Read(32,50,data);
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[1659] | 292 | cout<<"Number of values read: "<<n<<endl;
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| 293 | data.ReSize(100);
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| 294 | n = fbt.Read(10,-1,data);
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| 295 | cout<<"Number of values read: "<<n<<endl;
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[2456] | 296 | TVector<double> data2;
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| 297 | fbt2.Read(32,50,data);
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[2449] | 298 | // Close the fits file
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| 299 | delete fof;
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[1654] | 300 | \endverbatim
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| 301 | */
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| 302 |
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| 303 | //////////////////////////////////////////////////////////////
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| 304 | /*!
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| 305 | Constructor.
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[2449] | 306 | \param fof : Pointer to the Class for opening the FITS file
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[1659] | 307 | \param collabel : label of the column to be read
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| 308 | \param ihdu : number of the HDU where the column is.
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| 309 | \param blen : read buffer length
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| 310 | \param bsens : buffer reading direction
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| 311 | \param lp : debug level
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[1654] | 312 | \verbatim
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[2456] | 313 | - if ihdu<=0 first BINARY or ASCII table is taken
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| 314 | - if ihdu>nhdu ihdu is set to nhdu
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[1659] | 315 | - bsens>0 read forward
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| 316 | bsens<0 read backward
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| 317 | bsens==0 read centered
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[1654] | 318 | \endverbatim
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[1659] | 319 | \warning ihdu = [1,nhdu]
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[1654] | 320 | */
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[2449] | 321 | FitsABTColRd::FitsABTColRd(FitsOpenFile* fof,string collabel
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| 322 | ,int ihdu,long blen,long bsens,int lp)
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[1654] | 323 | {
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[2449] | 324 | Init(fof,collabel.c_str(),-1,ihdu,blen,bsens,lp);
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[1654] | 325 | }
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| 326 |
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| 327 | /*!
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| 328 | Constructor.
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[1659] | 329 | Same as before but the column is identified by its column number
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| 330 | \param colnum : number of the column to be read
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| 331 | \warning col = [0,ncol[
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[1654] | 332 | */
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[2449] | 333 | FitsABTColRd::FitsABTColRd(FitsOpenFile* fof,int colnum
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| 334 | ,int ihdu,long blen,long bsens,int lp)
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[1654] | 335 | {
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[2449] | 336 | Init(fof,"",colnum,ihdu,blen,bsens,lp);
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[1654] | 337 | }
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| 338 |
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[2449] | 339 | /*! Constructor by copy */
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| 340 | FitsABTColRd::FitsABTColRd(FitsABTColRd& fbt)
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[1654] | 341 | {
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[2449] | 342 | Init(fbt.GetFitsOpenFile(),fbt.GetColLabel().c_str()
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[2456] | 343 | ,fbt.GetColNum(),fbt.HDU()
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[2449] | 344 | ,fbt.GetBLen(),fbt.GetBSens(),fbt.DbgLevel);
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[1654] | 345 | }
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| 346 |
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[2449] | 347 | /*! Constructor by default */
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| 348 | FitsABTColRd::FitsABTColRd()
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[1654] | 349 | {
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[2449] | 350 | ColLabel = ""; ColTUnit = ""; ColTForm = "";
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| 351 | ColNum = -1; ColTypeCode = 0;
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| 352 | NBcol = 0; NBline = 0;
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| 353 | SetNulVal(); SetDebug(0);
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| 354 | NFitsRead = 0;
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[3114] | 355 | FitsOF = NULL;
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[2449] | 356 | LineDeb = LineFin = -1;
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| 357 | Buffer = NULL;
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[1654] | 358 | }
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| 359 |
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| 360 | /*! Init routine called by the constructor */
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[2449] | 361 | void FitsABTColRd::Init(FitsOpenFile* fof,const char* collabel,int colnum
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[1654] | 362 | ,int ihdu,long blen,long bsens,int lp)
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| 363 | {
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[2449] | 364 | // Initialisation des Parametres Generaux
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[2456] | 365 | ColLabel=collabel; ColTUnit=""; ColTForm=""; ColNum=colnum; ColTypeCode=0;
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| 366 | NBcol = 0; NBline = 0;
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| 367 | SetNulVal(); SetDebug(lp);
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[1654] | 368 | NFitsRead = 0;
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[3114] | 369 | FitsOF = NULL;
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[1654] | 370 | LineDeb = LineFin = -1;
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| 371 | Buffer = NULL;
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| 372 |
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[2449] | 373 | // Caracteristiques du FitsOpenFile
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| 374 | FitsOF = fof;
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[2456] | 375 | if(FitsOF==NULL)
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[2449] | 376 | throw NullPtrError("FitsABTColRd::Init: FitsOpenFile pointer is NULL\n");
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[2456] | 377 |
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[3114] | 378 | if(GetFitsPtr()==NULL)
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[2449] | 379 | throw NullPtrError("FitsABTColRd::Init: FitsPtr pointer is NULL\n");
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[1654] | 380 |
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[2449] | 381 | int sta = 0;
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[2456] | 382 | if(ihdu<0) ihdu=0; if(ihdu>NHDU()) ihdu=NHDU();
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[2449] | 383 |
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[1654] | 384 | // Get HDU for bin/ascii table
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[2456] | 385 | // ATTENTION: le fichier est ouvert mais non positionne sur un HDU,
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| 386 | // une classe utilisant ce fichier doit le positionner sur un HDU.
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| 387 | // Par contre, si une autre classe utilise ce meme FitsOpenFile,
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| 388 | // elle ne peut le positionner que sur ce meme HDU !
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| 389 | if(FitsOF->GetPosStatus()==false) {
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| 390 | if(ihdu==0) { // find the first BINARY then the first ASCII
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| 391 | int rc = FitsOF->MoveToFirst(BINARY_TBL);
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| 392 | if(rc!=BINARY_TBL) FitsOF->MoveToFirst(ASCII_TBL);
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| 393 | } else {
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| 394 | int rc = FitsOF->MoveToHDU(ihdu);
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| 395 | if(rc!=ihdu)
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| 396 | throw RangeCheckError("FitsABTColRd::Init: Error moving to requested HDU\n");
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[1654] | 397 | }
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[2456] | 398 | } else { // Fits file has already been positionned
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| 399 | if(ihdu>0 && ihdu!=HDU())
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| 400 | throw RangeCheckError("FitsABTColRd::Init: file already posit. at another HDU\n");
|
---|
[1654] | 401 | }
|
---|
[2456] | 402 |
|
---|
| 403 | // Check HDUType and set position status to TRUE
|
---|
| 404 | if(HDUType()!=BINARY_TBL && HDUType()!=ASCII_TBL)
|
---|
[2449] | 405 | throw TypeMismatchExc("FitsABTColRd::Init: HDU not ASCII/BINARY table\n");
|
---|
[2456] | 406 | if(DbgLevel>1) cout<<"...Init ihdu="<<ihdu<<" HduType="<<HDUType()<<endl;
|
---|
| 407 | FitsOF->SetPosStatus(true);
|
---|
[1654] | 408 |
|
---|
| 409 | // Get number of columns
|
---|
[3114] | 410 | if(fits_get_num_cols(GetFitsPtr(),&NBcol,&sta)) {
|
---|
[2456] | 411 | FitsOpenFile::printerror(sta);
|
---|
[2449] | 412 | throw NotAvailableOperation("FitsABTColRd::Init: Error getting number of columns\n");
|
---|
[1654] | 413 | }
|
---|
| 414 | if(DbgLevel>1) cout<<"...Init NBcol="<<NBcol<<endl;
|
---|
[2456] | 415 | if(NBcol<1)
|
---|
[2449] | 416 | throw RangeCheckError("FitsABTColRd::Init: Bad number of colums\n");
|
---|
[1654] | 417 |
|
---|
| 418 | // Get number of rows
|
---|
[3128] | 419 | if(fits_get_num_rowsll(GetFitsPtr(),&NBline,&sta)) {
|
---|
[2456] | 420 | FitsOpenFile::printerror(sta);
|
---|
[2449] | 421 | throw NotAvailableOperation("FitsABTColRd::Init: Error getting number of rows\n");
|
---|
[1654] | 422 | }
|
---|
| 423 | if(DbgLevel>1) cout<<"...Init NBline="<<NBline<<endl;
|
---|
[2456] | 424 | if(NBline<1)
|
---|
[2449] | 425 | throw RangeCheckError("FitsABTColRd::Init: Bad number of rows\n");
|
---|
[1654] | 426 |
|
---|
| 427 | // Get column number
|
---|
[1660] | 428 | char labelcol[128];
|
---|
[1654] | 429 | if(ColLabel.size() > 0) {
|
---|
| 430 | strcpy(labelcol,ColLabel.c_str());
|
---|
[3114] | 431 | if(fits_get_colnum(GetFitsPtr(),CASESEN,labelcol,&ColNum,&sta)) {
|
---|
[2456] | 432 | FitsOpenFile::printerror(sta);
|
---|
[3660] | 433 | throw NotAvailableOperation("FitsABTColRd::Init: Error getting column number\n");
|
---|
[1654] | 434 | }
|
---|
| 435 | ColNum--; // Convention [0,ncol[
|
---|
| 436 | }
|
---|
| 437 | if(DbgLevel>1) cout<<"...Init ColNum="<<ColNum<<endl;
|
---|
[2456] | 438 | if(ColNum<0 || ColNum>=NBcol)
|
---|
[2449] | 439 | throw RangeCheckError("FitsABTColRd::Init: Bad column number\n");
|
---|
[1654] | 440 |
|
---|
| 441 | // Get column type
|
---|
[3128] | 442 | if(fits_get_coltypell(GetFitsPtr(),ColNum+1,&ColTypeCode,NULL,NULL,&sta)) {
|
---|
[2456] | 443 | FitsOpenFile::printerror(sta);
|
---|
[2449] | 444 | throw ParmError("FitsABTColRd::Init: Error getting column type\n");
|
---|
[1654] | 445 | }
|
---|
| 446 | if(DbgLevel>1) cout<<"...Init ColTypeCode="<<ColTypeCode<<endl;
|
---|
[1660] | 447 | if(ColTypeCode==TSTRING || ColTypeCode==TCOMPLEX || ColTypeCode==TDBLCOMPLEX
|
---|
[2456] | 448 | || ColTypeCode<0 )
|
---|
[2449] | 449 | throw ParmError("FitsABTColRd::Init: Selected column is not Numerical\n");
|
---|
[1654] | 450 |
|
---|
| 451 | // Get column name back, tunit, tform
|
---|
[2174] | 452 | char tunit[64], tform[64], tdisp[64];
|
---|
[3128] | 453 | LONGLONG repeat=0; double tscale=1., tzero=0.;
|
---|
[1654] | 454 | int rc=0;
|
---|
[2456] | 455 | if(HDUType()==BINARY_TBL) {
|
---|
[3128] | 456 | fits_get_bcolparmsll(GetFitsPtr(),ColNum+1,labelcol,tunit,tform
|
---|
[2174] | 457 | ,&repeat,&tscale,&tzero,NULL,tdisp,&sta);
|
---|
[1654] | 458 | } else {
|
---|
[3128] | 459 | long repeatlng;
|
---|
| 460 | fits_get_acolparms(GetFitsPtr(),ColNum+1,labelcol,&repeatlng,tunit,tform
|
---|
[2174] | 461 | ,&tscale,&tzero,NULL,tdisp,&sta);
|
---|
[3128] | 462 | repeat = repeatlng;
|
---|
[1654] | 463 | }
|
---|
| 464 | if(rc) {
|
---|
[2456] | 465 | FitsOpenFile::printerror(sta);
|
---|
[2449] | 466 | throw RangeCheckError("FitsABTColRd::Init: Error getting the column caracteristics\n");
|
---|
[1654] | 467 | }
|
---|
| 468 | ColLabel = labelcol;
|
---|
| 469 | ColTUnit = tunit;
|
---|
| 470 | ColTForm = tform;
|
---|
| 471 |
|
---|
[2456] | 472 | // Set the buffer for reading
|
---|
| 473 | ChangeBuffer(blen,bsens);
|
---|
| 474 |
|
---|
[1654] | 475 | if(DbgLevel)
|
---|
[2449] | 476 | cout<<"FitsABTColRd::Init Num="<<ColNum<<" Label="<<ColLabel
|
---|
[2173] | 477 | <<" TypeCode="<<ColTypeCode<<" TUnit="<<ColTUnit<<" TForm="<<ColTForm<<endl;
|
---|
| 478 | if(DbgLevel>1)
|
---|
[2174] | 479 | cout<<" (repeat="<<repeat<<",tscale="<<tscale<<",tzero="<<tzero
|
---|
| 480 | <<",tdisp="<<tdisp<<")"<<endl;
|
---|
[1654] | 481 |
|
---|
| 482 | }
|
---|
| 483 |
|
---|
| 484 | /*! Destructor. */
|
---|
[2449] | 485 | FitsABTColRd::~FitsABTColRd()
|
---|
[1654] | 486 | {
|
---|
| 487 | Delete();
|
---|
| 488 | }
|
---|
| 489 |
|
---|
[2449] | 490 | /*! Delete called by the destructor */
|
---|
| 491 | void FitsABTColRd::Delete(void)
|
---|
[1814] | 492 | {
|
---|
[2449] | 493 | if(Buffer!=NULL) {delete [] Buffer; Buffer=NULL;}
|
---|
| 494 | LineDeb = LineFin = -1;
|
---|
| 495 | //--- Surtout on ne "fits_close_file" pas le fichier FITS !!!
|
---|
[1814] | 496 | }
|
---|
[1654] | 497 |
|
---|
| 498 | //////////////////////////////////////////////////////////////
|
---|
[1659] | 499 | /*! Change the buffer caracteristiques (see creator) */
|
---|
[2449] | 500 | void FitsABTColRd::ChangeBuffer(long blen,long bsens)
|
---|
[1654] | 501 | {
|
---|
[1657] | 502 | long oldnbuffer = NBuffer;
|
---|
| 503 |
|
---|
| 504 | // Compute buffer caracteristics
|
---|
[1654] | 505 | BuffLen = (blen<=0)? 1: blen;
|
---|
| 506 | BuffSens = bsens;
|
---|
[1657] | 507 | NBuffer = BuffLen;
|
---|
| 508 | if(bsens==0 && NBuffer%2==0) NBuffer++;
|
---|
[1654] | 509 |
|
---|
[1657] | 510 | // De-allocate if necessary
|
---|
[1659] | 511 | if(Buffer!=NULL) {
|
---|
| 512 | // On des-alloue si pas assez de place
|
---|
| 513 | // ou si l'ancienne place est beaucoup trop grande (>25%)
|
---|
| 514 | if(oldnbuffer<NBuffer || (oldnbuffer>NBuffer+long(0.25*NBuffer)) )
|
---|
| 515 | {delete [] Buffer; Buffer=NULL;}
|
---|
| 516 | }
|
---|
[1654] | 517 |
|
---|
[1657] | 518 | // Re-allocate
|
---|
| 519 | if(Buffer==NULL) Buffer = new double[NBuffer];
|
---|
| 520 |
|
---|
[1654] | 521 | // Tell program that nothing is into buffer
|
---|
| 522 | LineDeb = LineFin = -1;
|
---|
| 523 | }
|
---|
| 524 |
|
---|
[2449] | 525 | //////////////////////////////////////////////////////////////
|
---|
[2451] | 526 | /*!
|
---|
| 527 | Read a fitsheader key into double
|
---|
| 528 | \param keyname : name of the key
|
---|
| 529 | \return value into double
|
---|
| 530 | */
|
---|
[3572] | 531 | double FitsABTColRd::ReadKey(const char *keyname)
|
---|
[1654] | 532 | {
|
---|
[3114] | 533 | return FitsOpenFile::ReadKey(GetFitsPtr(),keyname);
|
---|
[1654] | 534 | }
|
---|
| 535 |
|
---|
[2451] | 536 | /*!
|
---|
| 537 | Read a fitsheader key into long
|
---|
| 538 | \param keyname : name of the key
|
---|
| 539 | \return value into long
|
---|
| 540 | */
|
---|
[3572] | 541 | long FitsABTColRd::ReadKeyL(const char *keyname)
|
---|
[2451] | 542 | {
|
---|
[3114] | 543 | return FitsOpenFile::ReadKeyL(GetFitsPtr(),keyname);
|
---|
[2451] | 544 | }
|
---|
| 545 |
|
---|
| 546 | /*!
|
---|
[3128] | 547 | Read a fitsheader key into long long
|
---|
| 548 | \param keyname : name of the key
|
---|
| 549 | \return value into long long
|
---|
| 550 | */
|
---|
[3572] | 551 | LONGLONG FitsABTColRd::ReadKeyLL(const char *keyname)
|
---|
[3128] | 552 | {
|
---|
| 553 | return FitsOpenFile::ReadKeyLL(GetFitsPtr(),keyname);
|
---|
| 554 | }
|
---|
| 555 |
|
---|
| 556 | /*!
|
---|
[2451] | 557 | Read a fitsheader key into string
|
---|
| 558 | \param keyname : name of the key
|
---|
| 559 | \return value into string
|
---|
| 560 | */
|
---|
[3572] | 561 | string FitsABTColRd::ReadKeyS(const char *keyname)
|
---|
[2451] | 562 | {
|
---|
[3114] | 563 | return FitsOpenFile::ReadKeyS(GetFitsPtr(),keyname);
|
---|
[2451] | 564 | }
|
---|
| 565 |
|
---|
[1654] | 566 | /////////////////////////////////////////////////
|
---|
| 567 | /*!
|
---|
[1659] | 568 | Read row "n" and return the value into a double
|
---|
| 569 | \warning be carefull for the range: row = [0,NRows[
|
---|
| 570 | \return value in double
|
---|
| 571 | \param n : number of the row to be read.
|
---|
[1654] | 572 | \verbatim
|
---|
[1659] | 573 | usebuffer == true : use read optimisation with bufferisation
|
---|
| 574 | == false : no optimisation with bufferisation
|
---|
| 575 | just read one value
|
---|
[1654] | 576 | \endverbatim
|
---|
| 577 | */
|
---|
[3128] | 578 | double FitsABTColRd::Read(LONGLONG n,bool usebuffer)
|
---|
[1654] | 579 | // Attention: n=nline [0,NBline[, cfistio veut [1,NBline]
|
---|
| 580 | // Attention: colnum [0,NBcol[ , cfistio veut [1,NBcol]
|
---|
| 581 | {
|
---|
[1659] | 582 | int sta=0;
|
---|
[1654] | 583 | if(n<0 || n>=NBline)
|
---|
[2449] | 584 | throw RangeCheckError("FitsABTColRd::Read try to read outside line range\n");
|
---|
[1654] | 585 |
|
---|
| 586 | // Pas de bufferisation, on lit betement
|
---|
[1659] | 587 | if(NBuffer==1 || !usebuffer) {
|
---|
[1654] | 588 | NFitsRead++;
|
---|
[1659] | 589 | double val;
|
---|
[3114] | 590 | fits_read_col(GetFitsPtr(),TDOUBLE,ColNum+1,n+1,1,1,NULL,&val,NULL,&sta);
|
---|
[1654] | 591 | if(sta) {
|
---|
[2453] | 592 | FitsOpenFile::printerror(sta);
|
---|
[2449] | 593 | throw NotAvailableOperation("FitsABTColRd::Read: Error Reading Fits file\n");
|
---|
[1654] | 594 | }
|
---|
[1659] | 595 | // On ne remplit Buffer[0] que si on a choisit
|
---|
| 596 | // un mode de lecture non bufferise (n==1) DES LE DEBUT.
|
---|
| 597 | // Si on a initialement choisit un mode bufferise (avec n>1),
|
---|
| 598 | // Buffer contient les valeurs chargees auparavent.
|
---|
| 599 | // Il ne faut pas faire {Buffer[0]=val; LineDeb=LineFin=n;}
|
---|
| 600 | // car on perd l'info de ces valeurs.
|
---|
| 601 | if(NBuffer==1) {Buffer[0]=val; LineDeb=LineFin=n;}
|
---|
| 602 | return val;
|
---|
[1654] | 603 | }
|
---|
| 604 |
|
---|
| 605 | // Gestion avec bufferisation
|
---|
[1659] | 606 | if(!Buffer)
|
---|
[2449] | 607 | throw RangeCheckError("FitsABTColRd::Read: Buffer not allocated\n");
|
---|
[1654] | 608 | if(n<LineDeb || n>LineFin) {
|
---|
| 609 | NFitsRead++;
|
---|
[3128] | 610 | LONGLONG row1,row2,nrow;
|
---|
[1654] | 611 | if(BuffSens>0) { // Cas remplissage forward
|
---|
| 612 | row1 = n+1;
|
---|
[1657] | 613 | row2 = row1+NBuffer-1; if(row2>NBline) row2 = NBline;
|
---|
[1654] | 614 | } else if(BuffSens<0) { // Cas remplissage backward
|
---|
| 615 | row2 = n+1;
|
---|
[1657] | 616 | row1 = row2-NBuffer+1; if(row1<1) row1 = 1;
|
---|
[1654] | 617 | } else { // Cas remplissage centre
|
---|
[1657] | 618 | row1 = n+1 - NBuffer/2; if(row1<1) row1 = 1;
|
---|
| 619 | row2 = n+1 + NBuffer/2; if(row2>NBline) row2 = NBline;
|
---|
[1654] | 620 | }
|
---|
| 621 | nrow = row2 - row1 + 1;
|
---|
| 622 | LineDeb = row1-1; LineFin = row2-1;
|
---|
| 623 | //cout<<"DBG-FitsRead: row1="<<row1<<" row2="<<row2<<" nrow="<<nrow
|
---|
| 624 | // <<" LineDeb,Fin="<<LineDeb<<","<<LineFin<<endl;
|
---|
[3114] | 625 | fits_read_col(GetFitsPtr(),TDOUBLE,ColNum+1,row1,1,nrow,NULL,Buffer,NULL,&sta);
|
---|
[1654] | 626 | if(sta) {
|
---|
[2453] | 627 | FitsOpenFile::printerror(sta);
|
---|
[1654] | 628 | LineDeb = LineFin = -1;
|
---|
[2449] | 629 | throw NotAvailableOperation("FitsABTColRd::Read: Error Reading Fits file\n");
|
---|
[1654] | 630 | }
|
---|
| 631 | }
|
---|
| 632 |
|
---|
| 633 | long ibuf = n-LineDeb;
|
---|
| 634 | return Buffer[ibuf];
|
---|
| 635 | }
|
---|
| 636 |
|
---|
| 637 | /*!
|
---|
[1659] | 638 | Read rows from "n1" to "n2" and return the values into TVector of double
|
---|
| 639 | \return NREAD the number of values read (n2-n1+1).
|
---|
| 640 | \warning row = [0,NRows[, the routine read [n1,n2]
|
---|
[1654] | 641 | \verbatim
|
---|
[1659] | 642 | - if n2<0 then read [n1,n2] where "n2=min(n1+vector_size-1,nrows-1)"
|
---|
| 643 | - Last row read is ALWAYS: "n2 = n1 + NREAD -1"
|
---|
| 644 | - The TVector is never resized if not necessary
|
---|
| 645 | -------------------------------------------------------------------------
|
---|
| 646 | - ex: suppose the column table contains 10 elements: nrows=10, rows=[0,9]
|
---|
| 647 |
|
---|
| 648 | TVector<double> V(5);
|
---|
| 649 | bt.Read(3,5,V) -> read rows=3,4,5 -> V.Size()==5 -> return 3
|
---|
| 650 | bt.Read(3,-1,V) -> read rows=3,4,5,6,7 -> V.Size()==5 -> return 5
|
---|
| 651 | bt.Read(7,-1,V) -> read rows=7,8,9 -> V.Size()==5 -> return 3
|
---|
| 652 | bt.Read(2,-1,V) -> read rows=2,3,4,5,6 -> V.Size()==5 -> return 5
|
---|
| 653 | bt.Read(-1,5,V) -> throw exception
|
---|
| 654 |
|
---|
| 655 | TVector<double> V(5);
|
---|
| 656 | bt.Read(3,99,V) -> read rows=3,4,5,6,7,8,9 -> V.Size()==7 -> return 7
|
---|
| 657 |
|
---|
| 658 | TVector<double> V(5);
|
---|
| 659 | bt.Read(2,8,V) -> read rows=2,3,4,5,6,7,8 -> V.Size()==7 -> return 7
|
---|
| 660 |
|
---|
| 661 | TVector<double> V;
|
---|
| 662 | bt.Read(3,5,V) -> read rows=3,4,5 -> V.Size()==3 -> return 3
|
---|
| 663 |
|
---|
| 664 | TVector<double> V;
|
---|
| 665 | bt.Read(3,-1,V) -> throw exception
|
---|
| 666 | -------------------------------------------------------------------------
|
---|
[1654] | 667 | \endverbatim
|
---|
| 668 | */
|
---|
[3128] | 669 | LONGLONG FitsABTColRd::Read(LONGLONG n1,LONGLONG n2,TVector<double>& data)
|
---|
[1654] | 670 | {
|
---|
[1659] | 671 | if(n1<0 || n1>=NBline)
|
---|
[2449] | 672 | throw RangeCheckError("FitsABTColRd::Read TVector bad requested 1srt line \n");
|
---|
[1659] | 673 | if(data.Size()<=0 && n2<n1)
|
---|
[2449] | 674 | throw RangeCheckError("FitsABTColRd::Read TVector bad requested 2sd line \n");
|
---|
[1659] | 675 | if(n2<0) n2 = n1 + data.Size()-1;
|
---|
| 676 | if(n2>=NBline) n2 = NBline-1;
|
---|
[1654] | 677 |
|
---|
[3128] | 678 | LONGLONG nread = n2-n1+1;
|
---|
[1659] | 679 | if(data.Size()<nread) data.SetSize(nread);
|
---|
| 680 |
|
---|
[3128] | 681 | //for(LONGLONG i=n1;i<=n2;i++) data(i-n1) = Read(i);
|
---|
[1659] | 682 | int sta=0;
|
---|
[3114] | 683 | fits_read_col(GetFitsPtr(),TDOUBLE,ColNum+1,n1+1,1,nread,NULL,data.Data(),NULL,&sta);
|
---|
[1659] | 684 | if(sta) {
|
---|
[2453] | 685 | FitsOpenFile::printerror(sta);
|
---|
[2449] | 686 | throw NotAvailableOperation("FitsABTColRd::Read_TVector<double>: Error Reading Fits file\n");
|
---|
[1659] | 687 | }
|
---|
| 688 |
|
---|
| 689 | return nread;
|
---|
[1654] | 690 | }
|
---|
| 691 |
|
---|
[1659] | 692 | /*! idem before but for TVector of float */
|
---|
[3128] | 693 | LONGLONG FitsABTColRd::Read(LONGLONG n1,LONGLONG n2,TVector<float>& data)
|
---|
[1659] | 694 | {
|
---|
| 695 | if(n1<0 || n1>=NBline)
|
---|
[2449] | 696 | throw RangeCheckError("FitsABTColRd::Read TVector bad requested 1srt line \n");
|
---|
[1659] | 697 | if(data.Size()<=0 && n2<n1)
|
---|
[2449] | 698 | throw RangeCheckError("FitsABTColRd::Read TVector bad requested 2sd line \n");
|
---|
[1659] | 699 | if(n2<0) n2 = n1 + data.Size()-1;
|
---|
| 700 | if(n2>=NBline) n2 = NBline-1;
|
---|
| 701 |
|
---|
[3128] | 702 | LONGLONG nread = n2-n1+1;
|
---|
[1659] | 703 | if(data.Size()<nread) data.SetSize(nread);
|
---|
| 704 |
|
---|
[3128] | 705 | //for(LONGLONG i=n1;i<=n2;i++) data(i-n1) = Read(i);
|
---|
[1659] | 706 | int sta=0;
|
---|
[3114] | 707 | fits_read_col(GetFitsPtr(),TFLOAT,ColNum+1,n1+1,1,nread,NULL,data.Data(),NULL,&sta);
|
---|
[1659] | 708 | if(sta) {
|
---|
[2453] | 709 | FitsOpenFile::printerror(sta);
|
---|
[2449] | 710 | throw NotAvailableOperation("FitsABTColRd::Read_TVector<float>: Error Reading Fits file\n");
|
---|
[1659] | 711 | }
|
---|
| 712 |
|
---|
| 713 | return nread;
|
---|
| 714 | }
|
---|
| 715 |
|
---|
[2170] | 716 | /*! idem before but for TVector of unsigned short */
|
---|
[3128] | 717 | LONGLONG FitsABTColRd::Read(LONGLONG n1,LONGLONG n2,TVector<uint_2>& data)
|
---|
[2170] | 718 | {
|
---|
| 719 | if(n1<0 || n1>=NBline)
|
---|
[2449] | 720 | throw RangeCheckError("FitsABTColRd::Read TVector bad requested 1srt line \n");
|
---|
[2170] | 721 | if(data.Size()<=0 && n2<n1)
|
---|
[2449] | 722 | throw RangeCheckError("FitsABTColRd::Read TVector bad requested 2sd line \n");
|
---|
[2170] | 723 | if(n2<0) n2 = n1 + data.Size()-1;
|
---|
| 724 | if(n2>=NBline) n2 = NBline-1;
|
---|
| 725 |
|
---|
[3128] | 726 | LONGLONG nread = n2-n1+1;
|
---|
[2170] | 727 | if(data.Size()<nread) data.SetSize(nread);
|
---|
| 728 |
|
---|
| 729 | int sta=0;
|
---|
[3114] | 730 | fits_read_col(GetFitsPtr(),TUSHORT,ColNum+1,n1+1,1,nread,NULL,data.Data(),NULL,&sta);
|
---|
[2170] | 731 | if(sta) {
|
---|
[2453] | 732 | FitsOpenFile::printerror(sta);
|
---|
[2449] | 733 | throw NotAvailableOperation("FitsABTColRd::Read_TVector<uint_2>: Error Reading Fits file\n");
|
---|
[2170] | 734 | }
|
---|
| 735 |
|
---|
| 736 | return nread;
|
---|
| 737 | }
|
---|
| 738 |
|
---|
[1659] | 739 | /*! idem before but for TVector of int_4 */
|
---|
[3128] | 740 | LONGLONG FitsABTColRd::Read(LONGLONG n1,LONGLONG n2,TVector<int_4>& data)
|
---|
[1659] | 741 | {
|
---|
| 742 | if(n1<0 || n1>=NBline)
|
---|
[2449] | 743 | throw RangeCheckError("FitsABTColRd::Read TVector bad requested 1srt line \n");
|
---|
[1659] | 744 | if(data.Size()<=0 && n2<n1)
|
---|
[2449] | 745 | throw RangeCheckError("FitsABTColRd::Read TVector bad requested 2sd line \n");
|
---|
[1659] | 746 | if(n2<0) n2 = n1 + data.Size()-1;
|
---|
| 747 | if(n2>=NBline) n2 = NBline-1;
|
---|
| 748 |
|
---|
[3128] | 749 | LONGLONG nread = n2-n1+1;
|
---|
[1659] | 750 | if(data.Size()<nread) data.SetSize(nread);
|
---|
| 751 |
|
---|
[3128] | 752 | //for(LONGLONG i=n1;i<=n2;i++) data(i-n1) = Read(i);
|
---|
[1659] | 753 | int sta=0;
|
---|
| 754 | int T = (sizeof(long)==4) ? TLONG: TINT;
|
---|
[3114] | 755 | fits_read_col(GetFitsPtr(),T,ColNum+1,n1+1,1,nread,NULL,data.Data(),NULL,&sta);
|
---|
[1659] | 756 | if(sta) {
|
---|
[2453] | 757 | FitsOpenFile::printerror(sta);
|
---|
[2449] | 758 | throw NotAvailableOperation("FitsABTColRd::Read_TVector<int_4>: Error Reading Fits file\n");
|
---|
[1659] | 759 | }
|
---|
| 760 |
|
---|
| 761 | return nread;
|
---|
| 762 | }
|
---|
| 763 |
|
---|
[2169] | 764 | /*! idem before but for TVector of int_8 */
|
---|
[3128] | 765 | LONGLONG FitsABTColRd::Read(LONGLONG n1,LONGLONG n2,TVector<int_8>& data)
|
---|
[2169] | 766 | {
|
---|
| 767 | #ifdef TLONGLONG
|
---|
| 768 | if(n1<0 || n1>=NBline)
|
---|
[2449] | 769 | throw RangeCheckError("FitsABTColRd::Read TVector bad requested 1srt line \n");
|
---|
[2169] | 770 | if(data.Size()<=0 && n2<n1)
|
---|
[2449] | 771 | throw RangeCheckError("FitsABTColRd::Read TVector bad requested 2sd line \n");
|
---|
[2169] | 772 | if(n2<0) n2 = n1 + data.Size()-1;
|
---|
| 773 | if(n2>=NBline) n2 = NBline-1;
|
---|
| 774 |
|
---|
[3128] | 775 | LONGLONG nread = n2-n1+1;
|
---|
[2169] | 776 | if(data.Size()<nread) data.SetSize(nread);
|
---|
| 777 |
|
---|
| 778 | int sta=0;
|
---|
[3114] | 779 | fits_read_col(GetFitsPtr(),TLONGLONG,ColNum+1,n1+1,1,nread,NULL,data.Data(),NULL,&sta);
|
---|
[2169] | 780 | if(sta) {
|
---|
[2453] | 781 | FitsOpenFile::printerror(sta);
|
---|
[2449] | 782 | throw NotAvailableOperation("FitsABTColRd::Read_TVector<int_8>: Error Reading Fits file\n");
|
---|
[2169] | 783 | }
|
---|
| 784 |
|
---|
| 785 | return nread;
|
---|
| 786 | #else
|
---|
[2449] | 787 | throw PException("FitsABTColRd::Read(..,TVector<int_8>&) Not in that cfitsio version");
|
---|
[2169] | 788 | #endif
|
---|
| 789 | }
|
---|
| 790 |
|
---|
[1654] | 791 | /////////////////////////////////////////////////
|
---|
[1659] | 792 | /*!
|
---|
| 793 | Return the number of the first row where "val1"<=val<="val2" starting at row "rowstart"
|
---|
| 794 | \verbatim
|
---|
| 795 | - The search is performed from "rowstart" to the end
|
---|
| 796 | in ascending order (from "rowstart" to nrows).
|
---|
| 797 | - Warning: "rowstart<0" means "rowstart==0" (search all the table column)
|
---|
| 798 | That is the default
|
---|
| 799 | \endverbatim
|
---|
| 800 | \return <0 means not found
|
---|
| 801 | */
|
---|
[3128] | 802 | LONGLONG FitsABTColRd::FirstRow(double val1,double val2,LONGLONG rowstart)
|
---|
[1659] | 803 | {
|
---|
[3128] | 804 | LONGLONG row = -1;
|
---|
[1659] | 805 | if(NBline==0) return row;
|
---|
| 806 | // Change buffer for efficiency
|
---|
| 807 | long bsens=BuffSens; bool bchange=false;
|
---|
| 808 | if(bsens<=0) {ChangeBuffer(BuffLen,1); bchange=true;}
|
---|
| 809 | if(rowstart<0) rowstart = 0;
|
---|
| 810 | if(rowstart>=NBline) rowstart = NBline-1;
|
---|
[3128] | 811 | for(LONGLONG i=rowstart;i<NBline;i++) {
|
---|
[1659] | 812 | double val = Read(i);
|
---|
| 813 | if(val<val1 || val>val2) continue;
|
---|
| 814 | row = i;
|
---|
| 815 | break;
|
---|
| 816 | }
|
---|
| 817 | if(bchange) ChangeBuffer(BuffLen,bsens);
|
---|
| 818 | return row;
|
---|
| 819 | }
|
---|
| 820 |
|
---|
| 821 | /*!
|
---|
| 822 | Return the number of the first row where val1<=val<=val2 starting at row rowstart
|
---|
| 823 | \return <0 means not found
|
---|
| 824 | \verbatim
|
---|
| 825 | - The search is performed from "rowstart" to the beginning
|
---|
| 826 | in descending order (from "rowstart" to 0).
|
---|
| 827 | - Warning: "rowstart<0" means "rowstart==nrows-1" (search all the table column)
|
---|
| 828 | That is the default
|
---|
| 829 | \endverbatim
|
---|
| 830 | */
|
---|
[3128] | 831 | LONGLONG FitsABTColRd::LastRow(double val1,double val2,LONGLONG rowstart)
|
---|
[1659] | 832 | {
|
---|
[3128] | 833 | LONGLONG row = -1;
|
---|
[1659] | 834 | if(NBline==0) return row;
|
---|
| 835 | // Change buffer for efficiency
|
---|
| 836 | long bsens=BuffSens; bool bchange=false;
|
---|
| 837 | if(bsens>=0) {ChangeBuffer(BuffLen,-1); bchange=true;}
|
---|
| 838 | if(rowstart<0 || rowstart>=NBline) rowstart = NBline-1;
|
---|
[3128] | 839 | for(LONGLONG i=rowstart;i>=0;i--) {
|
---|
[1659] | 840 | double val = Read(i);
|
---|
| 841 | if(val<val1 || val>val2) continue;
|
---|
| 842 | row = i;
|
---|
| 843 | break;
|
---|
| 844 | }
|
---|
| 845 | if(bchange) ChangeBuffer(BuffLen,bsens);
|
---|
| 846 | return row;
|
---|
| 847 | }
|
---|
| 848 |
|
---|
[1654] | 849 | /*! Print on stream os */
|
---|
[2449] | 850 | void FitsABTColRd::Print(ostream& os,int lp) const
|
---|
[1654] | 851 | {
|
---|
[2449] | 852 | os<<"FitsABTColRd:Print ("<<BuffLen<<","<<BuffSens<<","<<NulVal<<")"
|
---|
[1654] | 853 | <<" ncols="<<NBcol<<" nrows="<<NBline;
|
---|
| 854 | if(lp>0) os<<" NRead="<<NFitsRead;
|
---|
[2456] | 855 | os<<"\n... "<<FileName()<<"["<<HDU()<<"/"<<NHDU()<<" type="<<HDUType()<<"]"
|
---|
| 856 | <<"\n... Label["<<ColNum<<"]="<<ColLabel<<" TypeCode="<<ColTypeCode
|
---|
[1654] | 857 | <<" TUnit="<<ColTUnit<<" TForm="<<ColTForm
|
---|
| 858 | <<endl;
|
---|
| 859 | }
|
---|
[2449] | 860 |
|
---|
| 861 | ///////////////////////////////////////////////////////////////////
|
---|
| 862 | ///////////////////////////////////////////////////////////////////
|
---|
| 863 | ///////////////////////////////////////////////////////////////////
|
---|
| 864 | ///////////////////////////////////////////////////////////////////
|
---|
| 865 |
|
---|
| 866 | //! Class for reading a column in a FITS ASCII or BINARY table with fits file opening
|
---|
| 867 |
|
---|
| 868 | /*!
|
---|
| 869 | \class SOPHYA::FitsABTColRead
|
---|
| 870 | \ingroup FitsIOServer
|
---|
[2789] | 871 | Class for reading a column in a FITS ASCII or BINARY table with fits file opening.
|
---|
| 872 | The FITS file is opened each time you instanciate a FitsABTColRead.
|
---|
| 873 | So reading "n" columns of the same FITS table by instanciating "n"
|
---|
| 874 | FitsABTColRead, will open "n" times te FITS file.
|
---|
| 875 | Use FitsABTColRd if you want to open the FITS file only once.
|
---|
[2449] | 876 | \verbatim
|
---|
| 877 | -- Exemple:
|
---|
| 878 | FitsABTColRead fbt("myfits.fits","BoloMuv_28",0,1000,1,3);
|
---|
| 879 | fbt.SetDebug(3);
|
---|
| 880 | fbt.Print(3);
|
---|
| 881 | // Read element by element
|
---|
[3128] | 882 | for(LONGLONG i=0;i<fbt.GetNbLine();i++) {
|
---|
[2449] | 883 | double x = fbt.Read(i);
|
---|
| 884 | if(i%lpmod==0) cout<<i<<": "<<x<<endl;
|
---|
| 885 | }
|
---|
| 886 | // Read into a vector
|
---|
| 887 | TVector<double> data;
|
---|
[3128] | 888 | LONGLONG n = fbt.Read(32,50,data);
|
---|
[2449] | 889 | cout<<"Number of values read: "<<n<<endl;
|
---|
| 890 | data.ReSize(100);
|
---|
| 891 | n = fbt.Read(10,-1,data);
|
---|
| 892 | cout<<"Number of values read: "<<n<<endl;
|
---|
| 893 | \endverbatim
|
---|
| 894 | */
|
---|
| 895 |
|
---|
| 896 |
|
---|
| 897 | //////////////////////////////////////////////////////////////
|
---|
| 898 | /*!
|
---|
| 899 | Constructor.
|
---|
| 900 | \param fname : FITS file name to be read
|
---|
| 901 | \param collabel : label of the column to be read
|
---|
| 902 | \param ihdu : number of the HDU where the column is.
|
---|
| 903 | \param blen : read buffer length
|
---|
| 904 | \param bsens : buffer reading direction
|
---|
| 905 | \param lp : debug level
|
---|
| 906 | \verbatim
|
---|
[2456] | 907 | - if ihdu<=0 first BINARY or ASCII table is taken
|
---|
| 908 | - if ihdu>nhdu ihdu is set to nhdu
|
---|
[2449] | 909 | - bsens>0 read forward
|
---|
| 910 | bsens<0 read backward
|
---|
| 911 | bsens==0 read centered
|
---|
| 912 | \endverbatim
|
---|
| 913 | \warning ihdu = [1,nhdu]
|
---|
| 914 | */
|
---|
| 915 | FitsABTColRead::FitsABTColRead(string fname,string collabel
|
---|
| 916 | ,int ihdu,long blen,long bsens,int lp)
|
---|
| 917 | : FitsABTColRd(new FitsOpenFile(fname),collabel,ihdu,blen,bsens,lp)
|
---|
| 918 | {
|
---|
| 919 | }
|
---|
| 920 |
|
---|
| 921 | /*!
|
---|
| 922 | Constructor.
|
---|
| 923 | Same as before but the column is identified by its column number
|
---|
| 924 | \param colnum : number of the column to be read
|
---|
| 925 | \warning col = [0,ncol[
|
---|
| 926 | */
|
---|
| 927 | FitsABTColRead::FitsABTColRead(string fname,int colnum
|
---|
| 928 | ,int ihdu,long blen,long bsens,int lp)
|
---|
| 929 | : FitsABTColRd(new FitsOpenFile(fname),colnum,ihdu,blen,bsens,lp)
|
---|
| 930 | {
|
---|
| 931 | }
|
---|
| 932 |
|
---|
| 933 | /*! Constructor. see below */
|
---|
| 934 | FitsABTColRead::FitsABTColRead(const char * cfname,const char* collabel
|
---|
| 935 | ,int ihdu,long blen,long bsens,int lp)
|
---|
| 936 | : FitsABTColRd(new FitsOpenFile(cfname),collabel,ihdu,blen,bsens,lp)
|
---|
| 937 | {
|
---|
| 938 | }
|
---|
| 939 |
|
---|
| 940 | /*! Constructor. see below */
|
---|
| 941 | FitsABTColRead::FitsABTColRead(const char * cfname,int colnum
|
---|
| 942 | ,int ihdu,long blen,long bsens,int lp)
|
---|
| 943 | : FitsABTColRd(new FitsOpenFile(cfname),colnum,ihdu,blen,bsens,lp)
|
---|
| 944 | {
|
---|
| 945 | }
|
---|
| 946 | /*! Constructor by default */
|
---|
| 947 | FitsABTColRead::FitsABTColRead()
|
---|
[2791] | 948 | : FitsABTColRd()
|
---|
[2449] | 949 | {
|
---|
| 950 | }
|
---|
| 951 |
|
---|
| 952 | /*! Constructor by copy */
|
---|
| 953 | FitsABTColRead::FitsABTColRead(FitsABTColRead& fbt)
|
---|
| 954 | {
|
---|
| 955 | // --- ATTENTION ---
|
---|
| 956 | // FitsABTColRead ferme le fichier FITS: il faut dupliquer le FitsOpenFile
|
---|
| 957 | FitsOpenFile* fof = new FitsOpenFile(*fbt.GetFitsOpenFile());
|
---|
| 958 | Init(fof,fbt.GetColLabel().c_str()
|
---|
[2456] | 959 | ,fbt.GetColNum(),fbt.HDU()
|
---|
[2449] | 960 | ,fbt.GetBLen(),fbt.GetBSens(),fbt.DbgLevel);
|
---|
| 961 | }
|
---|
| 962 |
|
---|
| 963 | /*! Destructor. */
|
---|
| 964 | FitsABTColRead::~FitsABTColRead()
|
---|
| 965 | {
|
---|
[2789] | 966 | Delete(); // ?? inutile ??
|
---|
| 967 | // On detruit le FitsOpenFile, cad qu'on ferme (fits_file_close) le fichier FITS
|
---|
[2449] | 968 | if(FitsOF!=NULL) delete FitsOF;
|
---|
| 969 | }
|
---|
[2453] | 970 |
|
---|
| 971 | ///////////////////////////////////////////////////////////////////
|
---|
[2791] | 972 | ///////////////////////////////////////////////////////////////////
|
---|
| 973 | ///////////////////////////////////////////////////////////////////
|
---|
| 974 | ///////////////////////////////////////////////////////////////////
|
---|
| 975 |
|
---|
[3660] | 976 | FitsABTColRd1F::FitsABTColRd1F(FitsOpenFile* fof,int ihdu,long blen,long bsens,int lp)
|
---|
| 977 | {
|
---|
| 978 | Init(fof,ihdu,blen,bsens,lp);
|
---|
| 979 | }
|
---|
| 980 |
|
---|
| 981 | /*! Init routine called by the constructor */
|
---|
| 982 | void FitsABTColRd1F::Init(FitsOpenFile* fof,int ihdu,long blen,long bsens,int lp)
|
---|
| 983 | {
|
---|
| 984 | // Initialisation des Parametres Generaux
|
---|
| 985 | ColLabel.resize(0); ColTUnit.resize(0); ColTForm.resize(0); ColTypeCode.resize(0);
|
---|
| 986 | NBcol = 0; NBline = 0;
|
---|
| 987 | SetNulVal(); SetDebug(lp);
|
---|
| 988 | FitsOF = NULL;
|
---|
| 989 | LineDeb.resize(0); LineFin.resize(0);
|
---|
| 990 | Buffer = NULL;
|
---|
| 991 |
|
---|
| 992 | // Caracteristiques du FitsOpenFile
|
---|
| 993 | FitsOF = fof;
|
---|
| 994 | if(FitsOF==NULL)
|
---|
| 995 | throw NullPtrError("FitsABTColRd1F::Init: FitsOpenFile pointer is NULL\n");
|
---|
| 996 |
|
---|
| 997 | if(GetFitsPtr()==NULL)
|
---|
| 998 | throw NullPtrError("FitsABTColRd1F::Init: FitsPtr pointer is NULL\n");
|
---|
| 999 |
|
---|
| 1000 | int sta = 0;
|
---|
| 1001 | if(ihdu<0) ihdu=0; if(ihdu>NHDU()) ihdu=NHDU();
|
---|
| 1002 |
|
---|
| 1003 | // Get HDU for bin/ascii table
|
---|
| 1004 | // ATTENTION: le fichier est ouvert mais non positionne sur un HDU,
|
---|
| 1005 | // une classe utilisant ce fichier doit le positionner sur un HDU.
|
---|
| 1006 | // Par contre, si une autre classe utilise ce meme FitsOpenFile,
|
---|
| 1007 | // elle ne peut le positionner que sur ce meme HDU !
|
---|
| 1008 | if(FitsOF->GetPosStatus()==false) {
|
---|
| 1009 | if(ihdu==0) { // find the first BINARY then the first ASCII
|
---|
| 1010 | int rc = FitsOF->MoveToFirst(BINARY_TBL);
|
---|
| 1011 | if(rc!=BINARY_TBL) FitsOF->MoveToFirst(ASCII_TBL);
|
---|
| 1012 | } else {
|
---|
| 1013 | int rc = FitsOF->MoveToHDU(ihdu);
|
---|
| 1014 | if(rc!=ihdu)
|
---|
| 1015 | throw RangeCheckError("FitsABTColRd1F::Init: Error moving to requested HDU\n");
|
---|
| 1016 | }
|
---|
| 1017 | } else { // Fits file has already been positionned
|
---|
| 1018 | if(ihdu>0 && ihdu!=HDU())
|
---|
| 1019 | throw RangeCheckError("FitsABTColRd1F::Init: file already posit. at another HDU\n");
|
---|
| 1020 | }
|
---|
| 1021 |
|
---|
| 1022 | // Check HDUType and set position status to TRUE
|
---|
| 1023 | if(HDUType()!=BINARY_TBL && HDUType()!=ASCII_TBL)
|
---|
| 1024 | throw TypeMismatchExc("FitsABTColRd1F::Init: HDU not ASCII/BINARY table\n");
|
---|
| 1025 | if(DbgLevel>1) cout<<"...Init ihdu="<<ihdu<<" HduType="<<HDUType()<<endl;
|
---|
| 1026 | FitsOF->SetPosStatus(true);
|
---|
| 1027 |
|
---|
| 1028 | // Get number of columns
|
---|
| 1029 | if(fits_get_num_cols(GetFitsPtr(),&NBcol,&sta)) {
|
---|
| 1030 | FitsOpenFile::printerror(sta);
|
---|
| 1031 | throw NotAvailableOperation("FitsABTColRd1F::Init: Error getting number of columns\n");
|
---|
| 1032 | }
|
---|
| 1033 | if(DbgLevel>1) cout<<"...Init NBcol="<<NBcol<<endl;
|
---|
| 1034 | if(NBcol<1)
|
---|
| 1035 | throw RangeCheckError("FitsABTColRd1F::Init: Bad number of colums\n");
|
---|
| 1036 |
|
---|
| 1037 | // Get number of rows
|
---|
| 1038 | if(fits_get_num_rowsll(GetFitsPtr(),&NBline,&sta)) {
|
---|
| 1039 | FitsOpenFile::printerror(sta);
|
---|
| 1040 | throw NotAvailableOperation("FitsABTColRd1F::Init: Error getting number of rows\n");
|
---|
| 1041 | }
|
---|
| 1042 | if(DbgLevel>1) cout<<"...Init NBline="<<NBline<<endl;
|
---|
| 1043 | if(NBline<1)
|
---|
| 1044 | throw RangeCheckError("FitsABTColRd1F::Init: Bad number of rows\n");
|
---|
| 1045 |
|
---|
| 1046 | // --- Boucle sur les colonnes
|
---|
| 1047 | for(int ColNum=0;ColNum<NBcol;ColNum++) { // ***** ColNum
|
---|
| 1048 | // Get column type
|
---|
| 1049 | ColTypeCode.push_back(-999);
|
---|
| 1050 | if(fits_get_coltypell(GetFitsPtr(),ColNum+1,&ColTypeCode[ColNum],NULL,NULL,&sta)) {
|
---|
| 1051 | FitsOpenFile::printerror(sta);
|
---|
| 1052 | throw ParmError("FitsABTColRd1F::Init: Error getting column type\n");
|
---|
| 1053 | }
|
---|
| 1054 | if(DbgLevel>1) cout<<"...Init ColTypeCode="<<ColTypeCode[ColNum]<<endl;
|
---|
| 1055 | if(ColTypeCode[ColNum]==TSTRING || ColTypeCode[ColNum]==TCOMPLEX
|
---|
| 1056 | || ColTypeCode[ColNum]==TDBLCOMPLEX || ColTypeCode[ColNum]<0 )
|
---|
| 1057 | throw ParmError("FitsABTColRd1F::Init: Selected column is not Numerical\n");
|
---|
| 1058 | // Get column name, tunit, tform
|
---|
| 1059 | char labelcol[128];
|
---|
| 1060 | char tunit[64], tform[64], tdisp[64];
|
---|
| 1061 | LONGLONG repeat=0; double tscale=1., tzero=0.;
|
---|
| 1062 | int rc=0;
|
---|
| 1063 | if(HDUType()==BINARY_TBL) {
|
---|
| 1064 | fits_get_bcolparmsll(GetFitsPtr(),ColNum+1,labelcol,tunit,tform
|
---|
| 1065 | ,&repeat,&tscale,&tzero,NULL,tdisp,&sta);
|
---|
| 1066 | } else {
|
---|
| 1067 | long repeatlng;
|
---|
| 1068 | fits_get_acolparms(GetFitsPtr(),ColNum+1,labelcol,&repeatlng,tunit,tform
|
---|
| 1069 | ,&tscale,&tzero,NULL,tdisp,&sta);
|
---|
| 1070 | repeat = repeatlng;
|
---|
| 1071 | }
|
---|
| 1072 | if(rc) {
|
---|
| 1073 | FitsOpenFile::printerror(sta);
|
---|
| 1074 | throw RangeCheckError("FitsABTColRd1F::Init: Error getting the column caracteristics\n");
|
---|
| 1075 | }
|
---|
| 1076 | ColLabel.push_back(labelcol);
|
---|
| 1077 | ColTUnit.push_back(tunit);
|
---|
| 1078 | ColTForm.push_back(tform);
|
---|
| 1079 | // fill the default buffer limits at init
|
---|
| 1080 | LineDeb.push_back(-1);
|
---|
| 1081 | LineFin.push_back(-1);
|
---|
| 1082 | // some debug print if requested
|
---|
| 1083 | if(DbgLevel)
|
---|
| 1084 | cout<<"FitsABTColRd1F::Init Num="<<ColNum<<" Label="<<ColLabel[ColNum]
|
---|
| 1085 | <<" TypeCode="<<ColTypeCode[ColNum]<<" TUnit="<<ColTUnit[ColNum]<<" TForm="<<ColTForm[ColNum]<<endl;
|
---|
| 1086 | if(DbgLevel>1)
|
---|
| 1087 | cout<<" (repeat="<<repeat<<",tscale="<<tscale<<",tzero="<<tzero
|
---|
| 1088 | <<",tdisp="<<tdisp<<")"<<endl;
|
---|
| 1089 | } // ***** ColNum
|
---|
| 1090 |
|
---|
| 1091 | // Set the buffer for reading
|
---|
| 1092 | ChangeBuffer(blen,bsens);
|
---|
| 1093 |
|
---|
| 1094 | }
|
---|
| 1095 |
|
---|
| 1096 | /*! Destructor. */
|
---|
| 1097 | FitsABTColRd1F::~FitsABTColRd1F()
|
---|
| 1098 | {
|
---|
| 1099 | Delete();
|
---|
| 1100 | }
|
---|
| 1101 |
|
---|
| 1102 | /*! Delete called by the destructor */
|
---|
| 1103 | void FitsABTColRd1F::Delete(void)
|
---|
| 1104 | {
|
---|
| 1105 | if(NBcol>0 && Buffer!=NULL) {
|
---|
| 1106 | for(int ColNum=0; ColNum<NBcol; ColNum++)
|
---|
| 1107 | if(Buffer[ColNum]!=NULL) delete [] Buffer[ColNum];
|
---|
| 1108 | delete [] Buffer; Buffer=NULL;
|
---|
| 1109 | }
|
---|
| 1110 | LineDeb.resize(0); LineFin.resize(0);
|
---|
| 1111 | //--- Surtout on ne "fits_close_file" pas le fichier FITS !!!
|
---|
| 1112 | }
|
---|
| 1113 |
|
---|
| 1114 | //////////////////////////////////////////////////////////////
|
---|
| 1115 | /*! Change the buffer caracteristiques (see creator) */
|
---|
| 1116 | void FitsABTColRd1F::ChangeBuffer(long blen,long bsens)
|
---|
| 1117 | {
|
---|
| 1118 | long oldnbuffer = NBuffer;
|
---|
| 1119 |
|
---|
| 1120 | // Compute buffer caracteristics
|
---|
| 1121 | BuffLen = (blen<=0)? 1: blen;
|
---|
| 1122 | BuffSens = bsens;
|
---|
| 1123 | NBuffer = BuffLen;
|
---|
| 1124 | if(bsens==0 && NBuffer%2==0) NBuffer++;
|
---|
| 1125 |
|
---|
| 1126 | // De-allocate if necessary
|
---|
| 1127 | if(Buffer!=NULL) {
|
---|
| 1128 | // On des-alloue si pas assez de place
|
---|
| 1129 | // ou si l'ancienne place est beaucoup trop grande (>25%)
|
---|
| 1130 | if(oldnbuffer<NBuffer || (oldnbuffer>NBuffer+long(0.25*NBuffer)) ) {
|
---|
| 1131 | for(int ColNum=0; ColNum<NBcol; ColNum++) if(Buffer[ColNum]!=NULL) delete [] Buffer[ColNum];
|
---|
| 1132 | if(Buffer!=NULL) {delete [] Buffer; Buffer=NULL;}
|
---|
| 1133 | }
|
---|
| 1134 | }
|
---|
| 1135 |
|
---|
| 1136 | // Re-allocate
|
---|
| 1137 | if(Buffer==NULL) {
|
---|
| 1138 | Buffer = new double*[NBcol];
|
---|
| 1139 | for(int ColNum=0; ColNum<NBcol; ColNum++) Buffer[ColNum] = new double[NBuffer];
|
---|
| 1140 | }
|
---|
| 1141 |
|
---|
| 1142 | // Tell program that nothing is into buffer
|
---|
| 1143 | for(int ColNum=0; ColNum<NBcol; ColNum++) LineDeb[ColNum] = LineFin[ColNum] = -1;
|
---|
| 1144 | }
|
---|
| 1145 |
|
---|
| 1146 | //////////////////////////////////////////////////////////////
|
---|
| 1147 | /*!
|
---|
| 1148 | Read a fitsheader key into double
|
---|
| 1149 | \param keyname : name of the key
|
---|
| 1150 | \return value into double
|
---|
| 1151 | */
|
---|
| 1152 | double FitsABTColRd1F::ReadKey(const char *keyname)
|
---|
| 1153 | {
|
---|
| 1154 | return FitsOpenFile::ReadKey(GetFitsPtr(),keyname);
|
---|
| 1155 | }
|
---|
| 1156 |
|
---|
| 1157 | /*!
|
---|
| 1158 | Read a fitsheader key into long
|
---|
| 1159 | \param keyname : name of the key
|
---|
| 1160 | \return value into long
|
---|
| 1161 | */
|
---|
| 1162 | long FitsABTColRd1F::ReadKeyL(const char *keyname)
|
---|
| 1163 | {
|
---|
| 1164 | return FitsOpenFile::ReadKeyL(GetFitsPtr(),keyname);
|
---|
| 1165 | }
|
---|
| 1166 |
|
---|
| 1167 | /*!
|
---|
| 1168 | Read a fitsheader key into long long
|
---|
| 1169 | \param keyname : name of the key
|
---|
| 1170 | \return value into long long
|
---|
| 1171 | */
|
---|
| 1172 | LONGLONG FitsABTColRd1F::ReadKeyLL(const char *keyname)
|
---|
| 1173 | {
|
---|
| 1174 | return FitsOpenFile::ReadKeyLL(GetFitsPtr(),keyname);
|
---|
| 1175 | }
|
---|
| 1176 |
|
---|
| 1177 | /*!
|
---|
| 1178 | Read a fitsheader key into string
|
---|
| 1179 | \param keyname : name of the key
|
---|
| 1180 | \return value into string
|
---|
| 1181 | */
|
---|
| 1182 | string FitsABTColRd1F::ReadKeyS(const char *keyname)
|
---|
| 1183 | {
|
---|
| 1184 | return FitsOpenFile::ReadKeyS(GetFitsPtr(),keyname);
|
---|
| 1185 | }
|
---|
| 1186 |
|
---|
| 1187 | /////////////////////////////////////////////////
|
---|
| 1188 | int FitsABTColRd1F::GetColNum(const char *colname)
|
---|
| 1189 | // Get column number from column name
|
---|
| 1190 | {
|
---|
| 1191 | if(strlen(colname)<1 || NBcol<1) return -1;
|
---|
| 1192 | string slab(colname);
|
---|
| 1193 | for(int ColNum=0;ColNum<NBcol;ColNum++)
|
---|
| 1194 | if(slab == ColLabel[ColNum]) return ColNum;
|
---|
| 1195 | return -1;
|
---|
| 1196 | }
|
---|
| 1197 |
|
---|
| 1198 | /////////////////////////////////////////////////
|
---|
| 1199 | /*!
|
---|
| 1200 | Read row "n" of column "ColNum" and return the value into a double
|
---|
| 1201 | \warning be carefull for the range: row = [0,NRows[
|
---|
| 1202 | \return value in double
|
---|
| 1203 | \param n : number of the row to be read.
|
---|
| 1204 | \verbatim
|
---|
| 1205 | usebuffer == true : use read optimisation with bufferisation
|
---|
| 1206 | == false : no optimisation with bufferisation
|
---|
| 1207 | just read one value
|
---|
| 1208 | \endverbatim
|
---|
| 1209 | */
|
---|
| 1210 | double FitsABTColRd1F::Read(int ColNum,LONGLONG n,bool usebuffer)
|
---|
| 1211 | // Attention: n=nline [0,NBline[, cfistio veut [1,NBline]
|
---|
| 1212 | // Attention: colnum [0,NBcol[ , cfistio veut [1,NBcol]
|
---|
| 1213 | {
|
---|
| 1214 | int sta=0;
|
---|
| 1215 | if(ColNum<0 || ColNum>=NBcol)
|
---|
| 1216 | throw RangeCheckError("FitsABTColRd1F::Read try to read outside column range\n");
|
---|
| 1217 | if(n<0 || n>=NBline)
|
---|
| 1218 | throw RangeCheckError("FitsABTColRd1F::Read try to read outside line range\n");
|
---|
| 1219 |
|
---|
| 1220 | // Pas de bufferisation, on lit betement
|
---|
| 1221 | if(NBuffer==1 || !usebuffer) {
|
---|
| 1222 | double val;
|
---|
| 1223 | fits_read_col(GetFitsPtr(),TDOUBLE,ColNum+1,n+1,1,1,NULL,&val,NULL,&sta);
|
---|
| 1224 | if(sta) {
|
---|
| 1225 | FitsOpenFile::printerror(sta);
|
---|
| 1226 | throw NotAvailableOperation("FitsABTColRd1F::Read: Error Reading Fits file\n");
|
---|
| 1227 | }
|
---|
| 1228 | // On ne remplit Buffer[ColNum][0] que si on a choisit
|
---|
| 1229 | // un mode de lecture non bufferise (n==1) DES LE DEBUT.
|
---|
| 1230 | // Si on a initialement choisit un mode bufferise (avec n>1),
|
---|
| 1231 | // Buffer contient les valeurs chargees auparavent.
|
---|
| 1232 | // Il ne faut pas faire {Buffer[0]=val; LineDeb=LineFin=n;}
|
---|
| 1233 | // car on perd l'info de ces valeurs.
|
---|
| 1234 | if(NBuffer==1) {Buffer[ColNum][0]=val; LineDeb[ColNum]=LineFin[ColNum]=n;}
|
---|
| 1235 | return val;
|
---|
| 1236 | }
|
---|
| 1237 |
|
---|
| 1238 | // Gestion avec bufferisation
|
---|
| 1239 | if(!Buffer)
|
---|
| 1240 | throw RangeCheckError("FitsABTColRd1F::Read: Buffer not allocated\n");
|
---|
| 1241 | if(n<LineDeb[ColNum] || n>LineFin[ColNum]) {
|
---|
| 1242 | LONGLONG row1,row2,nrow;
|
---|
| 1243 | if(BuffSens>0) { // Cas remplissage forward
|
---|
| 1244 | row1 = n+1;
|
---|
| 1245 | row2 = row1+NBuffer-1; if(row2>NBline) row2 = NBline;
|
---|
| 1246 | } else if(BuffSens<0) { // Cas remplissage backward
|
---|
| 1247 | row2 = n+1;
|
---|
| 1248 | row1 = row2-NBuffer+1; if(row1<1) row1 = 1;
|
---|
| 1249 | } else { // Cas remplissage centre
|
---|
| 1250 | row1 = n+1 - NBuffer/2; if(row1<1) row1 = 1;
|
---|
| 1251 | row2 = n+1 + NBuffer/2; if(row2>NBline) row2 = NBline;
|
---|
| 1252 | }
|
---|
| 1253 | nrow = row2 - row1 + 1;
|
---|
| 1254 | LineDeb[ColNum] = row1-1; LineFin[ColNum] = row2-1;
|
---|
| 1255 | //cout<<"DBG-FitsRead: row1="<<row1<<" row2="<<row2<<" nrow="<<nrow
|
---|
| 1256 | // <<" LineDeb,Fin="<<LineDeb[ColNum]<<","<<LineFin[ColNum]<<endl;
|
---|
| 1257 | fits_read_col(GetFitsPtr(),TDOUBLE,ColNum+1,row1,1,nrow,NULL,Buffer[ColNum],NULL,&sta);
|
---|
| 1258 | if(sta) {
|
---|
| 1259 | FitsOpenFile::printerror(sta);
|
---|
| 1260 | LineDeb[ColNum] = LineFin[ColNum] = -1;
|
---|
| 1261 | throw NotAvailableOperation("FitsABTColRd1F::Read: Error Reading Fits file\n");
|
---|
| 1262 | }
|
---|
| 1263 | }
|
---|
| 1264 |
|
---|
| 1265 | long ibuf = n-LineDeb[ColNum];
|
---|
| 1266 | return Buffer[ColNum][ibuf];
|
---|
| 1267 | }
|
---|
| 1268 |
|
---|
| 1269 |
|
---|
| 1270 | /*! Print on stream os */
|
---|
| 1271 | void FitsABTColRd1F::Print(ostream& os,int lp) const
|
---|
| 1272 | {
|
---|
| 1273 | os<<"FitsABTColRd1F:Print ("<<BuffLen<<","<<BuffSens<<","<<NulVal<<")"
|
---|
| 1274 | <<" ncols="<<NBcol<<" nrows="<<NBline;
|
---|
| 1275 | os<<"\n... "<<FileName()<<"["<<HDU()<<"/"<<NHDU()<<" type="<<HDUType()<<"]"<<endl;
|
---|
| 1276 | if(lp>0 && NBcol>0) {
|
---|
| 1277 | for(int ColNum=0;ColNum<NBcol;ColNum++) {
|
---|
| 1278 | os<<"..Col="<<ColNum<<" Label="<<ColLabel[ColNum]<<" TypeCode="<<ColTypeCode[ColNum]
|
---|
| 1279 | <<" TUnit="<<ColTUnit[ColNum]<<" TForm="<<ColTForm[ColNum]
|
---|
| 1280 | <<endl;
|
---|
| 1281 | }
|
---|
| 1282 | }
|
---|
| 1283 | }
|
---|
| 1284 |
|
---|
| 1285 | ///////////////////////////////////////////////////////////////////
|
---|
| 1286 | ///////////////////////////////////////////////////////////////////
|
---|
| 1287 | ///////////////////////////////////////////////////////////////////
|
---|
| 1288 | ///////////////////////////////////////////////////////////////////
|
---|
| 1289 |
|
---|
| 1290 | /*!
|
---|
| 1291 | Constructor.
|
---|
| 1292 | Same as before but the column is identified by its column number
|
---|
| 1293 | \param colnum : number of the column to be read
|
---|
| 1294 | \warning col = [0,ncol[
|
---|
| 1295 | */
|
---|
| 1296 | FitsABTColRead1F::FitsABTColRead1F(string fname,int ihdu,long blen,long bsens,int lp)
|
---|
| 1297 | : FitsABTColRd1F(new FitsOpenFile(fname),ihdu,blen,bsens,lp)
|
---|
| 1298 | {
|
---|
| 1299 | }
|
---|
| 1300 |
|
---|
| 1301 | /*! Constructor. see below */
|
---|
| 1302 | FitsABTColRead1F::FitsABTColRead1F(const char * cfname,int ihdu,long blen,long bsens,int lp)
|
---|
| 1303 | : FitsABTColRd1F(new FitsOpenFile(cfname),ihdu,blen,bsens,lp)
|
---|
| 1304 | {
|
---|
| 1305 | }
|
---|
| 1306 |
|
---|
| 1307 | /*! Destructor. */
|
---|
| 1308 | FitsABTColRead1F::~FitsABTColRead1F()
|
---|
| 1309 | {
|
---|
| 1310 | Delete(); // ?? inutile ??
|
---|
| 1311 | // On detruit le FitsOpenFile, cad qu'on ferme (fits_file_close) le fichier FITS
|
---|
| 1312 | if(FitsOF!=NULL) delete FitsOF;
|
---|
| 1313 | }
|
---|
| 1314 |
|
---|
| 1315 | ///////////////////////////////////////////////////////////////////
|
---|
| 1316 | ///////////////////////////////////////////////////////////////////
|
---|
| 1317 | ///////////////////////////////////////////////////////////////////
|
---|
| 1318 | ///////////////////////////////////////////////////////////////////
|
---|
| 1319 |
|
---|
[2453] | 1320 | //! Class for reading a 2D image from a FITS file
|
---|
| 1321 |
|
---|
| 1322 | /*!
|
---|
| 1323 | \class SOPHYA::FitsImg2DRd
|
---|
| 1324 | \ingroup FitsIOServer
|
---|
| 1325 | Class for reading a 2D image from a FITS file
|
---|
| 1326 | */
|
---|
| 1327 |
|
---|
| 1328 | //////////////////////////////////////////////////////////////
|
---|
| 1329 | /*!
|
---|
| 1330 | Constructor.
|
---|
| 1331 | \param fof : Pointer to the Class for opening the FITS file
|
---|
[2456] | 1332 | \param ihdu : number of the HDU where the image is.
|
---|
[2453] | 1333 | \param lp : debug level
|
---|
| 1334 | \verbatim
|
---|
[2456] | 1335 | - if ihdu<=0 first IMAGE hdu is taken
|
---|
| 1336 | - if ihdu>nhdu ihdu is set to nhdu
|
---|
[2453] | 1337 | \endverbatim
|
---|
| 1338 | \warning ihdu = [1,nhdu]
|
---|
| 1339 | */
|
---|
| 1340 | FitsImg2DRd::FitsImg2DRd(FitsOpenFile* fof,int ihdu,int lp)
|
---|
| 1341 | {
|
---|
| 1342 | Init(fof,ihdu,lp);
|
---|
| 1343 | }
|
---|
| 1344 |
|
---|
| 1345 | /*! Constructor by copy */
|
---|
| 1346 | FitsImg2DRd::FitsImg2DRd(FitsImg2DRd& fbt)
|
---|
| 1347 | {
|
---|
[2456] | 1348 | Init(fbt.GetFitsOpenFile(),fbt.HDU(),fbt.DbgLevel);
|
---|
[2453] | 1349 | }
|
---|
| 1350 |
|
---|
| 1351 | /*! Constructor by default */
|
---|
| 1352 | FitsImg2DRd::FitsImg2DRd()
|
---|
| 1353 | {
|
---|
| 1354 | Naxis[0] = Naxis[1] = 0;
|
---|
| 1355 | SetNulVal(); SetDebug(0);
|
---|
[3114] | 1356 | FitsOF = NULL;
|
---|
[2453] | 1357 | }
|
---|
| 1358 |
|
---|
| 1359 | /*! Init routine called by the constructor */
|
---|
| 1360 | void FitsImg2DRd::Init(FitsOpenFile* fof,int ihdu,int lp)
|
---|
| 1361 | {
|
---|
| 1362 | // Initialisation des Parametres Generaux
|
---|
| 1363 | Naxis[0] = Naxis[1] = 0;
|
---|
| 1364 | SetNulVal(); SetDebug(lp);
|
---|
[3114] | 1365 | FitsOF = NULL;
|
---|
[2453] | 1366 |
|
---|
| 1367 | // Caracteristiques du FitsOpenFile
|
---|
| 1368 | FitsOF = fof;
|
---|
| 1369 | if(FitsOF==NULL)
|
---|
| 1370 | throw NullPtrError("FitsImg2DRd::Init: FitsOpenFile pointer is NULL\n");
|
---|
[2456] | 1371 |
|
---|
[3114] | 1372 | if(GetFitsPtr()==NULL)
|
---|
[2453] | 1373 | throw NullPtrError("FitsImg2DRd::Init: FitsPtr pointer is NULL\n");
|
---|
| 1374 |
|
---|
| 1375 | int sta = 0;
|
---|
[2456] | 1376 | if(ihdu<0) ihdu=0; if(ihdu>NHDU()) ihdu=NHDU();
|
---|
[2453] | 1377 |
|
---|
| 1378 | // Get HDU 2D image
|
---|
[2456] | 1379 | // ATTENTION: ... cf blabla equivalent dans FitsABTColRd::Init()
|
---|
| 1380 | if(FitsOF->GetPosStatus()==false) {
|
---|
| 1381 | if(ihdu==0) { // find the first IMAGE_HDU
|
---|
| 1382 | FitsOF->MoveToFirst(IMAGE_HDU);
|
---|
| 1383 | } else {
|
---|
| 1384 | int rc = FitsOF->MoveToHDU(ihdu);
|
---|
| 1385 | if(rc!=ihdu)
|
---|
[3114] | 1386 | throw RangeCheckError("FitsImg2DRd::Init: Error moving to requested HDU\n");
|
---|
[2453] | 1387 | }
|
---|
[2456] | 1388 | } else { // Fits file has already been positionned
|
---|
| 1389 | if(ihdu>0 && ihdu!=HDU())
|
---|
[3114] | 1390 | throw RangeCheckError("FitsImg2DRd::Init: file already posit. at another HDU\n");
|
---|
[2453] | 1391 | }
|
---|
[2456] | 1392 |
|
---|
| 1393 | // Check HDUType and set position status to TRUE
|
---|
| 1394 | if(HDUType()!=IMAGE_HDU)
|
---|
[2453] | 1395 | throw TypeMismatchExc("FitsImg2DRd::Init: HDU not IMAGE_HDU\n");
|
---|
[2456] | 1396 | FitsOF->SetPosStatus(true);
|
---|
[2453] | 1397 |
|
---|
| 1398 | // Get NAXIS 1 et 2
|
---|
| 1399 | int nfound=0;
|
---|
[3128] | 1400 | // car fits_read_keys_lnglng n'est pas prototype dans longnam.h
|
---|
| 1401 | if(ffgknjj(GetFitsPtr(),"NAXIS",1,2,Naxis,&nfound,&sta)) {
|
---|
[2453] | 1402 | FitsOpenFile::printerror(sta);
|
---|
| 1403 | throw RangeCheckError("FitsImg2DRd::Init: Error reading NAXIS cards\n");
|
---|
| 1404 | }
|
---|
| 1405 | if(DbgLevel>1)
|
---|
[2456] | 1406 | cout<<"...Init(hdu="<<HDU()<<") NAXIS1="<<Naxis[0]<<" NAXIS2="
|
---|
| 1407 | <<Naxis[1]<<" (nfound="<<nfound<<")"<<endl;
|
---|
[2453] | 1408 | if(nfound!=2 || Naxis[0]<=0 || Naxis[1]<=0)
|
---|
| 1409 | throw NotAvailableOperation("FitsImg2DRd::Init: bad Naxis[0-1] value\n");
|
---|
| 1410 |
|
---|
| 1411 | }
|
---|
| 1412 |
|
---|
| 1413 | /*! Destructor. */
|
---|
| 1414 | FitsImg2DRd::~FitsImg2DRd()
|
---|
| 1415 | {
|
---|
| 1416 | //--- Surtout on ne "fits_close_file" pas le fichier FITS !!!
|
---|
| 1417 | Naxis[0] = Naxis[1] = 0;
|
---|
| 1418 | }
|
---|
| 1419 |
|
---|
| 1420 | //////////////////////////////////////////////////////////////
|
---|
| 1421 | /*!
|
---|
| 1422 | Read a fitsheader key into double
|
---|
| 1423 | \param keyname : name of the key
|
---|
| 1424 | \return value into double
|
---|
| 1425 | */
|
---|
[3572] | 1426 | double FitsImg2DRd::ReadKey(const char *keyname)
|
---|
[2453] | 1427 | {
|
---|
[3114] | 1428 | return FitsOpenFile::ReadKey(GetFitsPtr(),keyname);
|
---|
[2453] | 1429 | }
|
---|
| 1430 |
|
---|
| 1431 | /*!
|
---|
| 1432 | Read a fitsheader key into long
|
---|
| 1433 | \param keyname : name of the key
|
---|
| 1434 | \return value into long
|
---|
| 1435 | */
|
---|
[3572] | 1436 | long FitsImg2DRd::ReadKeyL(const char *keyname)
|
---|
[2453] | 1437 | {
|
---|
[3114] | 1438 | return FitsOpenFile::ReadKeyL(GetFitsPtr(),keyname);
|
---|
[2453] | 1439 | }
|
---|
| 1440 |
|
---|
| 1441 | /*!
|
---|
[3128] | 1442 | Read a fitsheader key into long long
|
---|
| 1443 | \param keyname : name of the key
|
---|
| 1444 | \return value into long long
|
---|
| 1445 | */
|
---|
[3572] | 1446 | LONGLONG FitsImg2DRd::ReadKeyLL(const char *keyname)
|
---|
[3128] | 1447 | {
|
---|
| 1448 | return FitsOpenFile::ReadKeyLL(GetFitsPtr(),keyname);
|
---|
| 1449 | }
|
---|
| 1450 |
|
---|
| 1451 | /*!
|
---|
[2453] | 1452 | Read a fitsheader key into string
|
---|
| 1453 | \param keyname : name of the key
|
---|
| 1454 | \return value into string
|
---|
| 1455 | */
|
---|
[3572] | 1456 | string FitsImg2DRd::ReadKeyS(const char *keyname)
|
---|
[2453] | 1457 | {
|
---|
[3114] | 1458 | return FitsOpenFile::ReadKeyS(GetFitsPtr(),keyname);
|
---|
[2453] | 1459 | }
|
---|
| 1460 |
|
---|
| 1461 | //////////////////////////////////////////////////////////////
|
---|
| 1462 | /* REMARQUE:
|
---|
| 1463 | * Si une image FITS a NAXIS1=100 et NAXIS2=50
|
---|
| 1464 | * alors un tableau 2D juste assez grand pour contenir l'image
|
---|
| 1465 | * doit etre declare array[50][100] (et non pas array[100][50])
|
---|
| 1466 | * array[NAXIS2][NAXIS1]
|
---|
| 1467 | */
|
---|
| 1468 | /*!
|
---|
| 1469 | Read image into a TMatrix<uint_2>
|
---|
| 1470 | \warning TMatrix data(Naxis2,Naxis1)
|
---|
| 1471 | */
|
---|
[3128] | 1472 | LONGLONG FitsImg2DRd::Read(TMatrix<uint_2>& data)
|
---|
[2453] | 1473 | {
|
---|
| 1474 | int sta=0;
|
---|
| 1475 | uint_2* arr = new uint_2[Naxis[0]];
|
---|
| 1476 | data.ReSize(Naxis[1],Naxis[0]);
|
---|
| 1477 |
|
---|
[3128] | 1478 | for(LONGLONG j=0;j<Naxis[1];j++) {
|
---|
| 1479 | LONGLONG deb = j*Naxis[0]+1, nel = Naxis[0];
|
---|
[3114] | 1480 | fits_read_img(GetFitsPtr(),TUSHORT,deb,nel,&NulVal,arr,NULL,&sta);
|
---|
[2453] | 1481 | if(sta) {
|
---|
| 1482 | FitsOpenFile::printerror(sta); delete [] arr;
|
---|
| 1483 | throw
|
---|
| 1484 | NotAvailableOperation("FitsImg2DRd::Read(TMatrix<uint_2>): Error Reading Fits file\n");
|
---|
| 1485 | }
|
---|
[3128] | 1486 | for(LONGLONG i=0;i<Naxis[0];i++) data(j,i) = arr[i];
|
---|
[2453] | 1487 | }
|
---|
| 1488 |
|
---|
| 1489 | delete [] arr;
|
---|
| 1490 | return Naxis[0]*Naxis[1];
|
---|
[3188] | 1491 | }
|
---|
[2453] | 1492 |
|
---|
| 1493 | /*! Read image into a TMatrix<int_4> */
|
---|
[3128] | 1494 | LONGLONG FitsImg2DRd::Read(TMatrix<int_4>& data)
|
---|
[2453] | 1495 | {
|
---|
| 1496 | int sta=0;
|
---|
| 1497 | int_4* arr = new int_4[Naxis[0]];
|
---|
| 1498 | data.ReSize(Naxis[1],Naxis[0]);
|
---|
| 1499 | int T = (sizeof(long)==4) ? TLONG: TINT;
|
---|
| 1500 |
|
---|
[3128] | 1501 | for(LONGLONG j=0;j<Naxis[1];j++) {
|
---|
| 1502 | LONGLONG deb = j*Naxis[0]+1, nel = Naxis[0];
|
---|
[3114] | 1503 | fits_read_img(GetFitsPtr(),T,deb,nel,&NulVal,arr,NULL,&sta);
|
---|
[2453] | 1504 | if(sta) {
|
---|
| 1505 | FitsOpenFile::printerror(sta); delete [] arr;
|
---|
| 1506 | throw
|
---|
| 1507 | NotAvailableOperation("FitsImg2DRd::Read(TMatrix<int_4>): Error Reading Fits file\n");
|
---|
| 1508 | }
|
---|
[3128] | 1509 | for(LONGLONG i=0;i<Naxis[0];i++) data(j,i) = arr[i];
|
---|
[2453] | 1510 | }
|
---|
| 1511 |
|
---|
| 1512 | delete [] arr;
|
---|
| 1513 | return Naxis[0]*Naxis[1];
|
---|
[3188] | 1514 | }
|
---|
[2453] | 1515 |
|
---|
| 1516 | /*! Read image into a TMatrix<int_8> */
|
---|
[3128] | 1517 | LONGLONG FitsImg2DRd::Read(TMatrix<int_8>& data)
|
---|
[2453] | 1518 | {
|
---|
| 1519 | int sta=0;
|
---|
| 1520 | int_8* arr = new int_8[Naxis[0]];
|
---|
| 1521 | data.ReSize(Naxis[1],Naxis[0]);
|
---|
| 1522 |
|
---|
[3128] | 1523 | for(LONGLONG j=0;j<Naxis[1];j++) {
|
---|
| 1524 | LONGLONG deb = j*Naxis[0]+1, nel = Naxis[0];
|
---|
[3114] | 1525 | fits_read_img(GetFitsPtr(),TLONGLONG,deb,nel,&NulVal,arr,NULL,&sta);
|
---|
[2453] | 1526 | if(sta) {
|
---|
| 1527 | FitsOpenFile::printerror(sta); delete [] arr;
|
---|
| 1528 | throw
|
---|
| 1529 | NotAvailableOperation("FitsImg2DRd::Read(TMatrix<int_8>): Error Reading Fits file\n");
|
---|
| 1530 | }
|
---|
[3128] | 1531 | for(LONGLONG i=0;i<Naxis[0];i++) data(j,i) = arr[i];
|
---|
[2453] | 1532 | }
|
---|
| 1533 |
|
---|
| 1534 | delete [] arr;
|
---|
| 1535 | return Naxis[0]*Naxis[1];
|
---|
[3188] | 1536 | }
|
---|
[2453] | 1537 |
|
---|
| 1538 | /*! Read image into a TMatrix<float> */
|
---|
[3128] | 1539 | LONGLONG FitsImg2DRd::Read(TMatrix<float>& data)
|
---|
[2453] | 1540 | {
|
---|
| 1541 | int sta=0;
|
---|
| 1542 | float* arr = new float[Naxis[0]];
|
---|
| 1543 | data.ReSize(Naxis[1],Naxis[0]);
|
---|
| 1544 |
|
---|
[3128] | 1545 | for(LONGLONG j=0;j<Naxis[1];j++) {
|
---|
| 1546 | LONGLONG deb = j*Naxis[0]+1, nel = Naxis[0];
|
---|
[3114] | 1547 | fits_read_img(GetFitsPtr(),TFLOAT,deb,nel,&NulVal,arr,NULL,&sta);
|
---|
[2453] | 1548 | if(sta) {
|
---|
| 1549 | FitsOpenFile::printerror(sta); delete [] arr;
|
---|
| 1550 | throw
|
---|
| 1551 | NotAvailableOperation("FitsImg2DRd::Read(TMatrix<float>): Error Reading Fits file\n");
|
---|
| 1552 | }
|
---|
[3128] | 1553 | for(LONGLONG i=0;i<Naxis[0];i++) data(j,i) = arr[i];
|
---|
[2453] | 1554 | }
|
---|
| 1555 |
|
---|
| 1556 | delete [] arr;
|
---|
| 1557 | return Naxis[0]*Naxis[1];
|
---|
[3188] | 1558 | }
|
---|
[2453] | 1559 |
|
---|
| 1560 | /*! Read image into a TMatrix<double> */
|
---|
[3128] | 1561 | LONGLONG FitsImg2DRd::Read(TMatrix<double>& data)
|
---|
[2453] | 1562 | {
|
---|
| 1563 | int sta=0;
|
---|
| 1564 | double* arr = new double[Naxis[0]];
|
---|
| 1565 | data.ReSize(Naxis[1],Naxis[0]);
|
---|
| 1566 |
|
---|
[3128] | 1567 | for(LONGLONG j=0;j<Naxis[1];j++) {
|
---|
| 1568 | LONGLONG deb = j*Naxis[0]+1, nel = Naxis[0];
|
---|
[3114] | 1569 | fits_read_img(GetFitsPtr(),TDOUBLE,deb,nel,&NulVal,arr,NULL,&sta);
|
---|
[2453] | 1570 | if(sta) {
|
---|
| 1571 | FitsOpenFile::printerror(sta); delete [] arr;
|
---|
| 1572 | throw
|
---|
| 1573 | NotAvailableOperation("FitsImg2DRd::Read(TMatrix<double>): Error Reading Fits file\n");
|
---|
| 1574 | }
|
---|
[3128] | 1575 | for(LONGLONG i=0;i<Naxis[0];i++) data(j,i) = arr[i];
|
---|
[2453] | 1576 | }
|
---|
| 1577 |
|
---|
| 1578 | delete [] arr;
|
---|
| 1579 | return Naxis[0]*Naxis[1];
|
---|
[3188] | 1580 | }
|
---|
[2791] | 1581 |
|
---|
[3188] | 1582 | /*! Read image pixel numcol,numrow with numcol=[0,Naxis1[ and numrow=[0,Naxis2[ */
|
---|
| 1583 | double FitsImg2DRd::Read(LONGLONG numcol, LONGLONG numrow)
|
---|
| 1584 | {
|
---|
| 1585 | int sta=0;
|
---|
| 1586 | if(numcol<0 || numrow<0 || numcol>=Naxis[0] || numrow>=Naxis[1])
|
---|
| 1587 | throw
|
---|
| 1588 | NotAvailableOperation("FitsImg2DRd::Read(col,row): bad col/row number\n");
|
---|
| 1589 |
|
---|
| 1590 | LONGLONG deb = numrow*Naxis[0] + numcol + 1;
|
---|
| 1591 | double val = 0.;
|
---|
| 1592 | fits_read_img(GetFitsPtr(),TDOUBLE,deb,1,&NulVal,&val,NULL,&sta);
|
---|
| 1593 |
|
---|
| 1594 | if(sta) {
|
---|
| 1595 | FitsOpenFile::printerror(sta);
|
---|
| 1596 | throw
|
---|
| 1597 | NotAvailableOperation("FitsImg2DRd::Read(col,num): Error Reading Fits file\n");
|
---|
| 1598 | }
|
---|
| 1599 |
|
---|
| 1600 | return val;
|
---|
| 1601 | }
|
---|
| 1602 |
|
---|
[2791] | 1603 | ///////////////////////////////////////////////////////////////////
|
---|
| 1604 | ///////////////////////////////////////////////////////////////////
|
---|
| 1605 | ///////////////////////////////////////////////////////////////////
|
---|
| 1606 | ///////////////////////////////////////////////////////////////////
|
---|
| 1607 |
|
---|
| 1608 | //! Class for reading a 2D image from a FITS file
|
---|
| 1609 |
|
---|
| 1610 | /*!
|
---|
| 1611 | \class SOPHYA::FitsImg2DRead
|
---|
| 1612 | \ingroup FitsIOServer
|
---|
| 1613 | Class for reading a 2D image from a FITS file
|
---|
| 1614 | */
|
---|
| 1615 |
|
---|
| 1616 | //////////////////////////////////////////////////////////////
|
---|
| 1617 | /*!
|
---|
| 1618 | Constructor.
|
---|
| 1619 | \param fname : name of the FITS file
|
---|
| 1620 | \param ihdu : number of the HDU where the image is.
|
---|
| 1621 | \param lp : debug level
|
---|
| 1622 | \verbatim
|
---|
| 1623 | - if ihdu<=0 first IMAGE hdu is taken
|
---|
| 1624 | - if ihdu>nhdu ihdu is set to nhdu
|
---|
| 1625 | \endverbatim
|
---|
| 1626 | \warning ihdu = [1,nhdu]
|
---|
| 1627 | */
|
---|
| 1628 | FitsImg2DRead::FitsImg2DRead(string fname,int ihdu,int lp)
|
---|
| 1629 | : FitsImg2DRd(new FitsOpenFile(fname),ihdu,lp)
|
---|
| 1630 | {
|
---|
| 1631 | }
|
---|
| 1632 |
|
---|
| 1633 | /*! Constructor. see below */
|
---|
| 1634 | FitsImg2DRead::FitsImg2DRead(const char * cfname,int ihdu,int lp)
|
---|
| 1635 | : FitsImg2DRd(new FitsOpenFile(cfname),ihdu,lp)
|
---|
| 1636 | {
|
---|
| 1637 | }
|
---|
| 1638 |
|
---|
| 1639 | /*! Constructor by default */
|
---|
| 1640 | FitsImg2DRead::FitsImg2DRead()
|
---|
| 1641 | : FitsImg2DRd()
|
---|
| 1642 | {
|
---|
| 1643 | }
|
---|
| 1644 |
|
---|
| 1645 | /*! Constructor by copy */
|
---|
| 1646 | FitsImg2DRead::FitsImg2DRead(FitsImg2DRead& fimg)
|
---|
| 1647 | {
|
---|
| 1648 | // --- ATTENTION ---
|
---|
| 1649 | // FitsImg2DRead ferme le fichier FITS: il faut dupliquer le FitsOpenFile
|
---|
| 1650 | FitsOpenFile* fof = new FitsOpenFile(*fimg.GetFitsOpenFile());
|
---|
| 1651 | Init(fof,fimg.HDU(),fimg.DbgLevel);
|
---|
| 1652 | }
|
---|
| 1653 |
|
---|
| 1654 | /*! Destructor. */
|
---|
| 1655 | FitsImg2DRead::~FitsImg2DRead()
|
---|
| 1656 | {
|
---|
| 1657 | // On detruit le FitsOpenFile, cad qu'on ferme (fits_file_close) le fichier FITS
|
---|
| 1658 | if(FitsOF!=NULL) delete FitsOF;
|
---|
| 1659 | }
|
---|
[3114] | 1660 |
|
---|
| 1661 |
|
---|
| 1662 |
|
---|
| 1663 | ///////////////////////////////////////////////////////////////////
|
---|
| 1664 | ///////////////////////////////////////////////////////////////////
|
---|
| 1665 | ///////////////////////////////////////////////////////////////////
|
---|
| 1666 | ///////////////////////////////////////////////////////////////////
|
---|
| 1667 |
|
---|
| 1668 | //! Class for reading a 3D image from a FITS file
|
---|
| 1669 |
|
---|
| 1670 | /*!
|
---|
| 1671 | \class SOPHYA::FitsImg3DRd
|
---|
| 1672 | \ingroup FitsIOServer
|
---|
| 1673 | Class for reading a 3D image from a FITS file
|
---|
| 1674 | */
|
---|
| 1675 |
|
---|
| 1676 | //////////////////////////////////////////////////////////////
|
---|
| 1677 | /*!
|
---|
| 1678 | Constructor.
|
---|
| 1679 | \param fof : Pointer to the Class for opening the FITS file
|
---|
| 1680 | \param ihdu : number of the HDU where the 3D image is.
|
---|
| 1681 | \param lp : debug level
|
---|
| 1682 | \verbatim
|
---|
| 1683 | - if ihdu<=0 first IMAGE hdu is taken
|
---|
| 1684 | - if ihdu>nhdu ihdu is set to nhdu
|
---|
| 1685 | \endverbatim
|
---|
| 1686 | \warning ihdu = [1,nhdu]
|
---|
| 1687 | */
|
---|
| 1688 | FitsImg3DRd::FitsImg3DRd(FitsOpenFile* fof,int ihdu,int lp)
|
---|
| 1689 | {
|
---|
| 1690 | Init(fof,ihdu,lp);
|
---|
| 1691 | }
|
---|
| 1692 |
|
---|
| 1693 | /*! Constructor by copy */
|
---|
| 1694 | FitsImg3DRd::FitsImg3DRd(FitsImg3DRd& fbt)
|
---|
| 1695 | {
|
---|
| 1696 | Init(fbt.GetFitsOpenFile(),fbt.HDU(),fbt.DbgLevel);
|
---|
| 1697 | }
|
---|
| 1698 |
|
---|
| 1699 | /*! Constructor by default */
|
---|
| 1700 | FitsImg3DRd::FitsImg3DRd()
|
---|
| 1701 | {
|
---|
| 1702 | Naxis[0] = Naxis[1] = Naxis[2] = 0;
|
---|
| 1703 | SetNulVal(); SetDebug(0);
|
---|
| 1704 | FitsOF = NULL;
|
---|
| 1705 | }
|
---|
| 1706 |
|
---|
| 1707 | /*! Init routine called by the constructor */
|
---|
| 1708 | void FitsImg3DRd::Init(FitsOpenFile* fof,int ihdu,int lp)
|
---|
| 1709 | {
|
---|
| 1710 | // Initialisation des Parametres Generaux
|
---|
| 1711 | Naxis[0] = Naxis[1] = Naxis[2] = 0;
|
---|
| 1712 | SetNulVal(); SetDebug(lp);
|
---|
| 1713 | FitsOF = NULL;
|
---|
| 1714 |
|
---|
| 1715 | // Caracteristiques du FitsOpenFile
|
---|
| 1716 | FitsOF = fof;
|
---|
| 1717 | if(FitsOF==NULL)
|
---|
| 1718 | throw NullPtrError("FitsImg3DRd::Init: FitsOpenFile pointer is NULL\n");
|
---|
| 1719 |
|
---|
| 1720 | if(GetFitsPtr()==NULL)
|
---|
| 1721 | throw NullPtrError("FitsImg3DRd::Init: FitsPtr pointer is NULL\n");
|
---|
| 1722 |
|
---|
| 1723 | int sta = 0;
|
---|
| 1724 | if(ihdu<0) ihdu=0; if(ihdu>NHDU()) ihdu=NHDU();
|
---|
| 1725 |
|
---|
| 1726 | // Get HDU 3D image
|
---|
| 1727 | // ATTENTION: ... cf blabla equivalent dans FitsABTColRd::Init()
|
---|
| 1728 | if(FitsOF->GetPosStatus()==false) {
|
---|
| 1729 | if(ihdu==0) { // find the first IMAGE_HDU
|
---|
| 1730 | FitsOF->MoveToFirst(IMAGE_HDU);
|
---|
| 1731 | } else {
|
---|
| 1732 | int rc = FitsOF->MoveToHDU(ihdu);
|
---|
| 1733 | if(rc!=ihdu)
|
---|
| 1734 | throw RangeCheckError("FitsImg3DRd::Init: Error moving to requested HDU\n");
|
---|
| 1735 | }
|
---|
| 1736 | } else { // Fits file has already been positionned
|
---|
| 1737 | if(ihdu>0 && ihdu!=HDU())
|
---|
| 1738 | throw RangeCheckError("FitsImg3DRd::Init: file already posit. at another HDU\n");
|
---|
| 1739 | }
|
---|
| 1740 |
|
---|
| 1741 | // Check HDUType and set position status to TRUE
|
---|
| 1742 | if(HDUType()!=IMAGE_HDU)
|
---|
| 1743 | throw TypeMismatchExc("FitsImg3DRd::Init: HDU not IMAGE_HDU\n");
|
---|
| 1744 | FitsOF->SetPosStatus(true);
|
---|
| 1745 |
|
---|
| 1746 | // Get NAXIS 1, 2 et 3
|
---|
| 1747 | int nfound=0;
|
---|
[3128] | 1748 | // car fits_read_keys_lnglng n'est pas prototype dans longnam.h
|
---|
| 1749 | if(ffgknjj(GetFitsPtr(),"NAXIS",1,3,Naxis,&nfound,&sta)) {
|
---|
[3114] | 1750 | FitsOpenFile::printerror(sta);
|
---|
| 1751 | throw RangeCheckError("FitsImg3DRd::Init: Error reading NAXIS cards\n");
|
---|
| 1752 | }
|
---|
| 1753 | if(DbgLevel>1)
|
---|
| 1754 | cout<<"...Init(hdu="<<HDU()<<") NAXIS1="<<Naxis[0]<<" NAXIS2="
|
---|
| 1755 | <<Naxis[1]<<" NAXIS3="<<Naxis[2]<<" (nfound="<<nfound<<")"<<endl;
|
---|
| 1756 | if(nfound!=3 || Naxis[0]<=0 || Naxis[1]<=0 || Naxis[2]<=0)
|
---|
| 1757 | throw NotAvailableOperation("FitsImg3DRd::Init: bad Naxis[0-2] value\n");
|
---|
| 1758 |
|
---|
| 1759 | }
|
---|
| 1760 |
|
---|
| 1761 | /*! Destructor. */
|
---|
| 1762 | FitsImg3DRd::~FitsImg3DRd()
|
---|
| 1763 | {
|
---|
| 1764 | //--- Surtout on ne "fits_close_file" pas le fichier FITS !!!
|
---|
| 1765 | Naxis[0] = Naxis[1] = Naxis[2] = 0;
|
---|
| 1766 | }
|
---|
| 1767 |
|
---|
| 1768 | //////////////////////////////////////////////////////////////
|
---|
| 1769 | /*!
|
---|
| 1770 | Read a fitsheader key into double
|
---|
| 1771 | \param keyname : name of the key
|
---|
| 1772 | \return value into double
|
---|
| 1773 | */
|
---|
[3572] | 1774 | double FitsImg3DRd::ReadKey(const char *keyname)
|
---|
[3114] | 1775 | {
|
---|
| 1776 | return FitsOpenFile::ReadKey(GetFitsPtr(),keyname);
|
---|
| 1777 | }
|
---|
| 1778 |
|
---|
| 1779 | /*!
|
---|
| 1780 | Read a fitsheader key into long
|
---|
| 1781 | \param keyname : name of the key
|
---|
| 1782 | \return value into long
|
---|
| 1783 | */
|
---|
[3572] | 1784 | long FitsImg3DRd::ReadKeyL(const char *keyname)
|
---|
[3114] | 1785 | {
|
---|
| 1786 | return FitsOpenFile::ReadKeyL(GetFitsPtr(),keyname);
|
---|
| 1787 | }
|
---|
| 1788 |
|
---|
| 1789 | /*!
|
---|
[3128] | 1790 | Read a fitsheader key into long long
|
---|
| 1791 | \param keyname : name of the key
|
---|
| 1792 | \return value into long long
|
---|
| 1793 | */
|
---|
[3572] | 1794 | LONGLONG FitsImg3DRd::ReadKeyLL(const char *keyname)
|
---|
[3128] | 1795 | {
|
---|
| 1796 | return FitsOpenFile::ReadKeyLL(GetFitsPtr(),keyname);
|
---|
| 1797 | }
|
---|
| 1798 |
|
---|
| 1799 | /*!
|
---|
[3114] | 1800 | Read a fitsheader key into string
|
---|
| 1801 | \param keyname : name of the key
|
---|
| 1802 | \return value into string
|
---|
| 1803 | */
|
---|
[3572] | 1804 | string FitsImg3DRd::ReadKeyS(const char *keyname)
|
---|
[3114] | 1805 | {
|
---|
| 1806 | return FitsOpenFile::ReadKeyS(GetFitsPtr(),keyname);
|
---|
| 1807 | }
|
---|
| 1808 |
|
---|
| 1809 | //////////////////////////////////////////////////////////////
|
---|
| 1810 | /* REMARQUE:
|
---|
| 1811 | * Dans TArray A(naxis1,naxis2,naxis3);
|
---|
| 1812 | * A(i,j,k) -> i varie le plus vite et k le moins vite
|
---|
| 1813 | */
|
---|
| 1814 | /*!
|
---|
| 1815 | Read 3D image into a TArray<uint_2>
|
---|
| 1816 | */
|
---|
[3128] | 1817 | LONGLONG FitsImg3DRd::Read(TArray<uint_2>& data)
|
---|
[3114] | 1818 | {
|
---|
| 1819 | int sta=0;
|
---|
| 1820 | uint_2* arr = new uint_2[Naxis[0]];
|
---|
| 1821 | sa_size_t ndim[3] = {Naxis[0],Naxis[1],Naxis[2]}; data.ReSize(3,ndim);
|
---|
| 1822 |
|
---|
[3128] | 1823 | for(LONGLONG k=0;k<Naxis[2];k++) for(LONGLONG j=0;j<Naxis[1];j++) {
|
---|
| 1824 | LONGLONG deb = Naxis[0]*(j+Naxis[1]*k)+1, nel = Naxis[0];
|
---|
[3114] | 1825 | fits_read_img(GetFitsPtr(),TUSHORT,deb,nel,&NulVal,arr,NULL,&sta);
|
---|
| 1826 | if(sta) {
|
---|
| 1827 | FitsOpenFile::printerror(sta); delete [] arr;
|
---|
| 1828 | throw
|
---|
| 1829 | NotAvailableOperation("FitsImg3DRd::Read(TArray<uint_2>): Error Reading Fits file\n");
|
---|
| 1830 | }
|
---|
[3128] | 1831 | for(LONGLONG i=0;i<Naxis[0];i++) data(i,j,k) = arr[i];
|
---|
[3114] | 1832 | }
|
---|
| 1833 |
|
---|
| 1834 | delete [] arr;
|
---|
| 1835 | return Naxis[0]*Naxis[1]*Naxis[2];
|
---|
[3188] | 1836 | }
|
---|
[3114] | 1837 |
|
---|
| 1838 | /*! Read 3D image into a TArray<int_4> */
|
---|
[3128] | 1839 | LONGLONG FitsImg3DRd::Read(TArray<int_4>& data)
|
---|
[3114] | 1840 | {
|
---|
| 1841 | int sta=0;
|
---|
| 1842 | int_4* arr = new int_4[Naxis[0]];
|
---|
| 1843 | sa_size_t ndim[3] = {Naxis[0],Naxis[1],Naxis[2]}; data.ReSize(3,ndim);
|
---|
| 1844 | int T = (sizeof(long)==4) ? TLONG: TINT;
|
---|
| 1845 |
|
---|
[3128] | 1846 | for(LONGLONG k=0;k<Naxis[2];k++) for(LONGLONG j=0;j<Naxis[1];j++) {
|
---|
| 1847 | LONGLONG deb = Naxis[0]*(j+Naxis[1]*k)+1, nel = Naxis[0];
|
---|
[3114] | 1848 | fits_read_img(GetFitsPtr(),T,deb,nel,&NulVal,arr,NULL,&sta);
|
---|
| 1849 | if(sta) {
|
---|
| 1850 | FitsOpenFile::printerror(sta); delete [] arr;
|
---|
| 1851 | throw
|
---|
| 1852 | NotAvailableOperation("FitsImg3DRd::Read(TArray<int_4>): Error Reading Fits file\n");
|
---|
| 1853 | }
|
---|
[3128] | 1854 | for(LONGLONG i=0;i<Naxis[0];i++) data(i,j,k) = arr[i];
|
---|
[3114] | 1855 | }
|
---|
| 1856 |
|
---|
| 1857 | delete [] arr;
|
---|
| 1858 | return Naxis[0]*Naxis[1]*Naxis[2];
|
---|
[3188] | 1859 | }
|
---|
[3114] | 1860 |
|
---|
| 1861 | /*! Read 3D image into a TArray<int_8> */
|
---|
[3128] | 1862 | LONGLONG FitsImg3DRd::Read(TArray<int_8>& data)
|
---|
[3114] | 1863 | {
|
---|
| 1864 | int sta=0;
|
---|
| 1865 | int_8* arr = new int_8[Naxis[0]];
|
---|
| 1866 | sa_size_t ndim[3] = {Naxis[0],Naxis[1],Naxis[2]}; data.ReSize(3,ndim);
|
---|
| 1867 |
|
---|
[3128] | 1868 | for(LONGLONG k=0;k<Naxis[2];k++) for(LONGLONG j=0;j<Naxis[1];j++) {
|
---|
| 1869 | LONGLONG deb = Naxis[0]*(j+Naxis[1]*k)+1, nel = Naxis[0];
|
---|
[3114] | 1870 | fits_read_img(GetFitsPtr(),TLONGLONG,deb,nel,&NulVal,arr,NULL,&sta);
|
---|
| 1871 | if(sta) {
|
---|
| 1872 | FitsOpenFile::printerror(sta); delete [] arr;
|
---|
| 1873 | throw
|
---|
| 1874 | NotAvailableOperation("FitsImg3DRd::Read(TArray<int_8>): Error Reading Fits file\n");
|
---|
| 1875 | }
|
---|
[3128] | 1876 | for(LONGLONG i=0;i<Naxis[0];i++) data(i,j,k) = arr[i];
|
---|
[3114] | 1877 | }
|
---|
| 1878 |
|
---|
| 1879 | delete [] arr;
|
---|
| 1880 | return Naxis[0]*Naxis[1]*Naxis[2];
|
---|
[3188] | 1881 | }
|
---|
[3114] | 1882 |
|
---|
| 1883 | /*! Read 3D image into a TArray<float> */
|
---|
[3128] | 1884 | LONGLONG FitsImg3DRd::Read(TArray<float>& data)
|
---|
[3114] | 1885 | {
|
---|
| 1886 | int sta=0;
|
---|
| 1887 | float* arr = new float[Naxis[0]];
|
---|
| 1888 | sa_size_t ndim[3] = {Naxis[0],Naxis[1],Naxis[2]}; data.ReSize(3,ndim);
|
---|
| 1889 |
|
---|
[3128] | 1890 | for(LONGLONG k=0;k<Naxis[2];k++) for(LONGLONG j=0;j<Naxis[1];j++) {
|
---|
| 1891 | LONGLONG deb = Naxis[0]*(j+Naxis[1]*k)+1, nel = Naxis[0];
|
---|
[3114] | 1892 | fits_read_img(GetFitsPtr(),TFLOAT,deb,nel,&NulVal,arr,NULL,&sta);
|
---|
| 1893 | if(sta) {
|
---|
| 1894 | FitsOpenFile::printerror(sta); delete [] arr;
|
---|
| 1895 | throw
|
---|
| 1896 | NotAvailableOperation("FitsImg3DRd::Read(TArray<float>): Error Reading Fits file\n");
|
---|
| 1897 | }
|
---|
[3128] | 1898 | for(LONGLONG i=0;i<Naxis[0];i++) data(i,j,k) = arr[i];
|
---|
[3114] | 1899 | }
|
---|
| 1900 |
|
---|
| 1901 | delete [] arr;
|
---|
| 1902 | return Naxis[0]*Naxis[1]*Naxis[2];
|
---|
[3188] | 1903 | }
|
---|
[3114] | 1904 |
|
---|
| 1905 | /*! Read 3D image into a TArray<double> */
|
---|
[3128] | 1906 | LONGLONG FitsImg3DRd::Read(TArray<double>& data)
|
---|
[3114] | 1907 | {
|
---|
| 1908 | int sta=0;
|
---|
| 1909 | double* arr = new double[Naxis[0]];
|
---|
| 1910 | sa_size_t ndim[3] = {Naxis[0],Naxis[1],Naxis[2]}; data.ReSize(3,ndim);
|
---|
| 1911 |
|
---|
[3128] | 1912 | for(LONGLONG k=0;k<Naxis[2];k++) for(LONGLONG j=0;j<Naxis[1];j++) {
|
---|
| 1913 | LONGLONG deb = Naxis[0]*(j+Naxis[1]*k)+1, nel = Naxis[0];
|
---|
[3114] | 1914 | fits_read_img(GetFitsPtr(),TDOUBLE,deb,nel,&NulVal,arr,NULL,&sta);
|
---|
| 1915 | if(sta) {
|
---|
| 1916 | FitsOpenFile::printerror(sta); delete [] arr;
|
---|
| 1917 | throw
|
---|
| 1918 | NotAvailableOperation("FitsImg3DRd::Read(TArray<double>): Error Reading Fits file\n");
|
---|
| 1919 | }
|
---|
[3128] | 1920 | for(LONGLONG i=0;i<Naxis[0];i++) data(i,j,k) = arr[i];
|
---|
[3114] | 1921 | }
|
---|
| 1922 |
|
---|
| 1923 | delete [] arr;
|
---|
| 1924 | return Naxis[0]*Naxis[1]*Naxis[2];
|
---|
[3188] | 1925 | }
|
---|
[3114] | 1926 |
|
---|
[3188] | 1927 | /*! Read 3D image pixel i,j,k with i=[0,Naxis1[ , j=[0,Naxis2[ , k=[0,Naxis3[ */
|
---|
| 1928 | double FitsImg3DRd::Read(LONGLONG i, LONGLONG j, LONGLONG k)
|
---|
| 1929 | {
|
---|
| 1930 | int sta=0;
|
---|
| 1931 | if(i<0 || j<0 || k<0 || i>=Naxis[0] || j>=Naxis[1] || k>=Naxis[2])
|
---|
| 1932 | throw
|
---|
| 1933 | NotAvailableOperation("FitsImg3DRd::Read(i,j,k): bad i/j/k number\n");
|
---|
| 1934 |
|
---|
| 1935 | LONGLONG deb = Naxis[0]*(j+Naxis[1]*k)+i+1;
|
---|
| 1936 | double val = 0.;
|
---|
| 1937 | fits_read_img(GetFitsPtr(),TDOUBLE,deb,1,&NulVal,&val,NULL,&sta);
|
---|
| 1938 |
|
---|
| 1939 | if(sta) {
|
---|
| 1940 | FitsOpenFile::printerror(sta);
|
---|
| 1941 | throw
|
---|
| 1942 | NotAvailableOperation("FitsImg3DRd::Read(i,j,k): Error Reading Fits file\n");
|
---|
| 1943 | }
|
---|
| 1944 |
|
---|
| 1945 | return val;
|
---|
| 1946 | }
|
---|
| 1947 |
|
---|
[3114] | 1948 | ///////////////////////////////////////////////////////////////////
|
---|
| 1949 | ///////////////////////////////////////////////////////////////////
|
---|
| 1950 | ///////////////////////////////////////////////////////////////////
|
---|
| 1951 | ///////////////////////////////////////////////////////////////////
|
---|
| 1952 |
|
---|
| 1953 | //! Class for reading a 3D image from a FITS file
|
---|
| 1954 |
|
---|
| 1955 | /*!
|
---|
| 1956 | \class SOPHYA::FitsImg3DRead
|
---|
| 1957 | \ingroup FitsIOServer
|
---|
| 1958 | Class for reading a 3D image from a FITS file
|
---|
| 1959 | */
|
---|
| 1960 |
|
---|
| 1961 | //////////////////////////////////////////////////////////////
|
---|
| 1962 | /*!
|
---|
| 1963 | Constructor.
|
---|
| 1964 | \param fname : name of the FITS file
|
---|
| 1965 | \param ihdu : number of the HDU where the 3D image is.
|
---|
| 1966 | \param lp : debug level
|
---|
| 1967 | \verbatim
|
---|
| 1968 | - if ihdu<=0 first IMAGE hdu is taken
|
---|
| 1969 | - if ihdu>nhdu ihdu is set to nhdu
|
---|
| 1970 | \endverbatim
|
---|
| 1971 | \warning ihdu = [1,nhdu]
|
---|
| 1972 | */
|
---|
| 1973 | FitsImg3DRead::FitsImg3DRead(string fname,int ihdu,int lp)
|
---|
| 1974 | : FitsImg3DRd(new FitsOpenFile(fname),ihdu,lp)
|
---|
| 1975 | {
|
---|
| 1976 | }
|
---|
| 1977 |
|
---|
| 1978 | /*! Constructor. see below */
|
---|
| 1979 | FitsImg3DRead::FitsImg3DRead(const char * cfname,int ihdu,int lp)
|
---|
| 1980 | : FitsImg3DRd(new FitsOpenFile(cfname),ihdu,lp)
|
---|
| 1981 | {
|
---|
| 1982 | }
|
---|
| 1983 |
|
---|
| 1984 | /*! Constructor by default */
|
---|
| 1985 | FitsImg3DRead::FitsImg3DRead()
|
---|
| 1986 | : FitsImg3DRd()
|
---|
| 1987 | {
|
---|
| 1988 | }
|
---|
| 1989 |
|
---|
| 1990 | /*! Constructor by copy */
|
---|
| 1991 | FitsImg3DRead::FitsImg3DRead(FitsImg3DRead& fimg)
|
---|
| 1992 | {
|
---|
| 1993 | // --- ATTENTION ---
|
---|
| 1994 | // FitsImg3DRead ferme le fichier FITS: il faut dupliquer le FitsOpenFile
|
---|
| 1995 | FitsOpenFile* fof = new FitsOpenFile(*fimg.GetFitsOpenFile());
|
---|
| 1996 | Init(fof,fimg.HDU(),fimg.DbgLevel);
|
---|
| 1997 | }
|
---|
| 1998 |
|
---|
| 1999 | /*! Destructor. */
|
---|
| 2000 | FitsImg3DRead::~FitsImg3DRead()
|
---|
| 2001 | {
|
---|
| 2002 | // On detruit le FitsOpenFile, cad qu'on ferme (fits_file_close) le fichier FITS
|
---|
| 2003 | if(FitsOF!=NULL) delete FitsOF;
|
---|
| 2004 | }
|
---|