[2615] | 1 | #include "sopnamsp.h"
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[860] | 2 | #include "pexceptions.h"
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| 3 | #include "fitsntuple.h"
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| 4 | ///////////////////////////////////////////////////////////
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| 5 | // Les objets delegues pour la gestion de persistance sur fichiers fits
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| 6 | // pout NTuple
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| 7 | ///////////////////////////////////////////////////////////
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| 8 |
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| 9 |
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| 10 | #define LONNOM 8
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| 11 | #define LONNOM1 (LONNOM+1)
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| 12 |
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| 13 |
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[1371] | 14 | /*!
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| 15 | \class SOPHYA::FITS_NTuple
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| 16 | \ingroup FitsIOServer
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| 17 | FITS format I/O handler for SOPHYA::NTuple objects.
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| 18 | */
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[860] | 19 |
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| 20 | FITS_NTuple::FITS_NTuple()
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| 21 | {
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| 22 | dobj_ = new NTuple;
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[1047] | 23 | InitNull();
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| 24 | ownobj_ = true;
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[860] | 25 | }
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| 26 |
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| 27 | FITS_NTuple::FITS_NTuple(char inputfile[],int hdunum)
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| 28 | {
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| 29 | dobj_ = new NTuple;
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[1047] | 30 | InitNull();
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| 31 | ownobj_ = true;
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[860] | 32 |
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[1136] | 33 | Read(inputfile,hdunum);
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[860] | 34 | }
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| 35 |
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| 36 |
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| 37 | FITS_NTuple::FITS_NTuple(const NTuple & obj)
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| 38 | {
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| 39 | dobj_ = new NTuple(obj);
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[1047] | 40 | InitNull();
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| 41 | ownobj_ = true;
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[860] | 42 | }
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[1047] | 43 | FITS_NTuple::FITS_NTuple(NTuple* obj)
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| 44 | {
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| 45 | dobj_ = obj;
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| 46 | InitNull();
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| 47 | ownobj_ = false;
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| 48 | }
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[860] | 49 |
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| 50 |
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| 51 | FITS_NTuple::~FITS_NTuple()
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| 52 | {
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[1047] | 53 | if (ownobj_ && dobj_ != NULL) delete dobj_;
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[1136] | 54 | // if (column_ != NULL) delete [] column_;
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[860] | 55 | }
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| 56 |
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[1136] | 57 | //void FITS_NTuple::Read(char inputfile[],int hdunum)
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| 58 | //{
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| 59 | // ReadF(inputfile,hdunum);
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| 60 | //}
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[1047] | 61 | void FITS_NTuple::ReadLines(char inputfile[],int firstLine, int numberOfLines,int hdunum)
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| 62 | {
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| 63 | fistLineToBeRead_ = firstLine;
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| 64 | numberOfLinesToBeRead_ = numberOfLines;
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[1136] | 65 | Read(inputfile,hdunum);
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[1047] | 66 | }
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| 67 |
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| 68 |
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| 69 |
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[1136] | 70 | //void FITS_NTuple::Write(char outputfile[], bool OldFile)
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| 71 | //{
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| 72 | // WriteF(outputfile, OldFile);
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| 73 | //}
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[860] | 74 |
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[1136] | 75 | void FITS_NTuple::ReadFromFits(FitsInFile& is)
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[860] | 76 | {
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[1136] | 77 | if (!is.IsFitsTable())
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[860] | 78 | {
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| 79 | throw PException("ReadFromFits: the fits file seems not to be a bintable nor ASCII table");
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| 80 | }
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| 81 | int nbcols, nbentries;
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[1136] | 82 | nbcols = is.NbColsFromFits();
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[860] | 83 | nbentries = 0;
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[923] | 84 | int k;
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[1136] | 85 | for (k=0; k<nbcols; k++) nbentries=max( nbentries, is.NentriesFromFits(k) );
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[860] | 86 |
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| 87 | char ** ColName = new char*[nbcols];
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| 88 |
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[923] | 89 | for (k=0; k<nbcols;k++)
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[860] | 90 | {
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| 91 | ColName[k] = new char[LONNOM1];
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[1136] | 92 | strncpy(ColName[k], is.ColNameFromFits(k).c_str(),LONNOM);
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[860] | 93 | ColName[k][LONNOM] = '\0';
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| 94 | }
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[923] | 95 | for (k=0; k<nbcols;k++)
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[860] | 96 | {
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[1300] | 97 | FitsFile::FitsDataType ss= is.ColTypeFromFits(k);
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[860] | 98 | string type;
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[1300] | 99 | if (ss != FitsFile::FitsDataType_float)
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[860] | 100 | {
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[1300] | 101 | if (ss == FitsFile::FitsDataType_double) type= string("double");
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[860] | 102 | else
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[1300] | 103 | if (ss == FitsFile::FitsDataType_int) type= string("integer");
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[860] | 104 | else
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[1300] | 105 | if (ss == FitsFile::FitsDataType_char) type = string("char*");
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[860] | 106 | else
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| 107 | type = string("unknown");
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| 108 | cout << " WARNING: the column " << k << " on fits file is not float but : " << type << endl;
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| 109 | }
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| 110 | }
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| 111 | if(dobj_ == NULL)
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| 112 | {
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| 113 | dobj_= new NTuple(nbcols,ColName);
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[1047] | 114 | ownobj_ = true;
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[860] | 115 | }
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| 116 | else
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| 117 | {
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| 118 | dobj_->Clean();
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| 119 | (*dobj_) = NTuple(nbcols,ColName);
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| 120 | }
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[923] | 121 | for (k=0; k<nbcols;k++)
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[860] | 122 | {
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| 123 | delete [] ColName[k];
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| 124 | }
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| 125 | delete [] ColName;
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| 126 |
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[1143] | 127 | float* ligne = new float[nbcols];
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[1047] | 128 |
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[1136] | 129 | int firstln, lastln;
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| 130 | if (numberOfLinesToBeRead_ > 0)
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| 131 | {
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| 132 | firstln = fistLineToBeRead_;
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| 133 | lastln = firstln + numberOfLinesToBeRead_;
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| 134 | }
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| 135 | else
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| 136 | {
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| 137 | firstln = 0;
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| 138 | lastln = nbentries;
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| 139 | }
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| 140 | int numLigne;
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| 141 | for (numLigne=firstln; numLigne < lastln; numLigne++)
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| 142 | {
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| 143 | is.GetBinTabLine(numLigne, ligne);
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[1143] | 144 | dobj_->Fill((r_4*)ligne);
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[1136] | 145 | }
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| 146 | delete [] ligne;
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[1047] | 147 |
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[1136] | 148 | dobj_->Info()=is.DVListFromFits();
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| 149 | }
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[1047] | 150 |
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[1136] | 151 | void FITS_NTuple::WriteToFits(FitsOutFile& os)
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[860] | 152 | {
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| 153 | if(dobj_ == NULL)
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| 154 | {
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| 155 | cout << " WriteToFits:: dobj_= null " << endl;
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| 156 | return;
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| 157 | }
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| 158 |
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| 159 | // table will have 'ncols' columns
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| 160 | int ncols = dobj_->NVar();
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| 161 |
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| 162 | // table will have 'nrows' rows
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| 163 | int nentries = dobj_->NEntry();
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| 164 |
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| 165 | // get names and values from the join DVList object
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| 166 | DVList dvl= dobj_->Info();
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[1300] | 167 | dvl["Content"]= "NTuple";
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| 168 | dvl.SetComment("Content", "name of SOPHYA object");
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[860] | 169 | // extension name
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[1194] | 170 | string extname("NTuple_Binary_tbl");
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[860] | 171 |
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[1194] | 172 | vector<string> Noms(ncols);
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[923] | 173 | int k;
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| 174 | for (k=0; k< ncols; k++)
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[860] | 175 | {
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[1194] | 176 | Noms[k]= dobj_->NomIndex(k);
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[860] | 177 | }
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[1136] | 178 |
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[1194] | 179 | string type(ncols, 'E');
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[860] | 180 | vector<int> dummy;
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[1136] | 181 |
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[1221] | 182 | os.makeHeaderBntblOnFits(type,Noms, nentries, ncols, &dvl, extname, dummy);
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[1136] | 183 | float* column = new float[nentries];
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| 184 | for (k=0; k<ncols;k++)
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| 185 | {
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[2209] | 186 | int j;
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| 187 | for(j = 0; j < nentries; j++) column[j]= dobj_->GetVal(j,k);
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[1210] | 188 | os.PutColToFits(k, nentries, column);
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[1136] | 189 | }
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| 190 | delete [] column;
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[860] | 191 |
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| 192 | }
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| 193 |
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